View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5304_low_7 (Length: 238)
Name: NF5304_low_7
Description: NF5304
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5304_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 2231399 - 2231177
Alignment:
| Q |
1 |
ttttcagaagtatttattttcattatttgatgtataaattttgaaaataaaaatagagtataaaactcttaatttaagtttggtataattttaacttccg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
2231399 |
ttttcagaagtatttattttcattatttgatgtataaattttgaaaataaaaatagagtataaaactcttaatttatgtttggtataattttaacttccg |
2231300 |
T |
|
| Q |
101 |
gttattataaaattatcacattatttgtttttaattgtaattttttcatattatgatgttttctctgaactaatgtaataaaggccaaactactcaagaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2231299 |
gttattataaaattatcacattatttgtttttaattgtaattttttcatataaagatgttttctctgaactaatgtaataaaggccaaactactcaagaa |
2231200 |
T |
|
| Q |
201 |
atattttacctcgattttaaatt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
2231199 |
atattttacctcgattttaaatt |
2231177 |
T |
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