View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5310-Insertion-5 (Length: 330)
Name: NF5310-Insertion-5
Description: NF5310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5310-Insertion-5 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 7 - 330
Target Start/End: Complemental strand, 12274096 - 12273775
Alignment:
| Q |
7 |
acatcagacacaacacaaacatacagacaatgtaaacaccaatatatatctagttgtgttgcgtgtgtcgaagttatgttggtgtctgataccgacacat |
106 |
Q |
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| T |
12274096 |
acatcagacacaacacaaacata--gacaatgtaaacaccaatatatatctagttgtgtcgcgtgtgtcaaagttatgttggtgtctgataccgacacat |
12273999 |
T |
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| Q |
107 |
gttggatgttcatgacctctctttattaagccgaattatcattgttatacatagcaactaacaagtgaaacttgttaatatcataaaaatcaagcttatc |
206 |
Q |
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| T |
12273998 |
gttggatgttcatgacctctctttattaagccgaattatcattgttatacatagcaactaacaagtgaaacttgttaatatcataaaaatcaagcttatc |
12273899 |
T |
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| Q |
207 |
aatacaacaatatcttgaagcatatcataaaaattcaagcaatcatttgacacctaccagctgaagagtcccacttgcatggccagaagcacctgaagct |
306 |
Q |
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| T |
12273898 |
aatacaacaatatcttgaagcatatcataaaaattcaagcaatcatttgacacctaccagctgaagagtcccacttgcatggccagaagcacctgaagct |
12273799 |
T |
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| Q |
307 |
ataatttgaacagttcttgctcta |
330 |
Q |
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| T |
12273798 |
ataatttgaacagttcttgctcta |
12273775 |
T |
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