View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5310_low_7 (Length: 325)
Name: NF5310_low_7
Description: NF5310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5310_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 16 - 308
Target Start/End: Complemental strand, 4058678 - 4058386
Alignment:
| Q |
16 |
atttaacaacccagctaaaactttaattcaacttcaaaataaaatcaatcagtttgcatagttaatttcaaattaatctctactacaatctctacggcca |
115 |
Q |
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| T |
4058678 |
atttaacaacccagctaaaactttaattcaacttcaaaataaaatcaatcagtttgcatagttaatttcaaattaatctctactacaatctctacggcca |
4058579 |
T |
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| Q |
116 |
tggacttggagaccatgtttggattacaaacttcatatccaatcaaacaatgagaatttctcgtggaattagcaagaaaacttcgaaatggcttatatat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4058578 |
tggacttggagaccatgtttggattacaaacttcatatccaatcaaacaatgagaatttctcgtggaattagcaagaaaacttcgaaatggcttatatat |
4058479 |
T |
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| Q |
216 |
gtcacccttccaatcccctattcatccgattttgcatcaaacaaatttcatatataactttatataggtaccgattagattattcaatttgaa |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
4058478 |
gtcacccttccaatcccctattcatccgattttgcatcaaacaaatttcatatataactttatataggtactgattagattattcaatttgaa |
4058386 |
T |
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