View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5311_high_48 (Length: 261)
Name: NF5311_high_48
Description: NF5311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5311_high_48 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 117 - 261
Target Start/End: Original strand, 8153927 - 8154068
Alignment:
| Q |
117 |
tattccaagattctcgaaacggcagggcaatctaataaaaataaagttatttcaaatggaagtattcaaaagacacaaatgctacagcttgtaactgtaa |
216 |
Q |
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| T |
8153927 |
tattccaagattctcgaaacggcagggcaatctattaaaaataaagttatttcaaatggaagtattcaaaagacacaaatgctacagcttgtaactgt-- |
8154024 |
T |
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| Q |
217 |
caactatattggtcgagtaatgtgaagtcaatgtaccaaaatgtt |
261 |
Q |
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| T |
8154025 |
-aactatattggtcgagtaatgtgaagtcaatgtaccaaaatgtt |
8154068 |
T |
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