View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5311_high_53 (Length: 251)
Name: NF5311_high_53
Description: NF5311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5311_high_53 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 9 - 251
Target Start/End: Complemental strand, 28903438 - 28903196
Alignment:
| Q |
9 |
gattattcttaatagtgatattttttcattgtttcatttctttaaacttttacttttgaggaacgtttctgtgtgtttgtgtctatataggagtgatttt |
108 |
Q |
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| T |
28903438 |
gattcttcttaatagtgatatttttttattgtttcatttctttaaacttttacttttgaggaacgtttctttgtgtttgtgtgtatataggagtgatttt |
28903339 |
T |
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| Q |
109 |
agtttgaattttgtttctcaatattcatttcaaacttaatgtattttctgaaatttaaggacttaatgtattttttgaaatttaaggaatataaattata |
208 |
Q |
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| T |
28903338 |
agtttgaattttgtttctcaatattcatttcaaacttaatgtattttctgaaatttaaggacttaatgtattttttgaaatttaaggagtataaattata |
28903239 |
T |
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| Q |
209 |
tacaagtgtaaattttatatcaattatgtacatatacaggagt |
251 |
Q |
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| T |
28903238 |
tacaagtgtaaattttaaatcaattatgtacgtatacaggagt |
28903196 |
T |
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