View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5311_high_66 (Length: 237)
Name: NF5311_high_66
Description: NF5311
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5311_high_66 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 48493150 - 48492927
Alignment:
| Q |
1 |
cacaacttaaactgacttgaaaaccatgtgtgttcagatattggcattcttcttgagaccaaatagggattccaagtttcgcaaaatgtggaatttgtac |
100 |
Q |
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| T |
48493150 |
cacaacttaaactgacttgaaaaccatgtgtgttcagatattggcattcttcttgagaccaaatagggattccaagtttcgcaaaatgtggaatttgtac |
48493051 |
T |
|
| Q |
101 |
cacagttggtttggaaggatggcactattctttgcagccttgaacatagtattgggaatgcaagctgcaggagcaacgaatgcttggaagacaagctatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48493050 |
cacagttggtttggaaggatggcactattctttgcagccttgaacatagtattgggaatgcaagctgcaggagcaacgaatgcttggaagacaagctatg |
48492951 |
T |
|
| Q |
201 |
gattccttgctggtattataattg |
224 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
48492950 |
gattccttgctggtattataattg |
48492927 |
T |
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