View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5312-Insertion-6 (Length: 345)

Name: NF5312-Insertion-6
Description: NF5312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5312-Insertion-6
NF5312-Insertion-6
[»] chr4 (44 HSPs)
chr4 (7-345)||(21683371-21683706)
chr4 (98-146)||(51044550-51044598)
chr4 (106-163)||(30338667-30338723)
chr4 (94-146)||(4798650-4798702)
chr4 (99-146)||(21593102-21593149)
chr4 (99-149)||(42641721-42641771)
chr4 (171-212)||(2996627-2996668)
chr4 (99-136)||(41050628-41050665)
chr4 (106-146)||(6364088-6364128)
chr4 (161-209)||(7730644-7730692)
chr4 (106-150)||(26520316-26520360)
chr4 (106-138)||(45128409-45128441)
chr4 (99-163)||(54325112-54325175)
chr4 (107-150)||(3155543-3155586)
chr4 (99-146)||(4071815-4071861)
chr4 (99-138)||(4191671-4191710)
chr4 (99-150)||(4471103-4471154)
chr4 (99-150)||(11389458-11389509)
chr4 (99-150)||(17884000-17884051)
chr4 (99-146)||(20907105-20907152)
chr4 (99-150)||(23503491-23503542)
chr4 (103-146)||(24929429-24929472)
chr4 (98-133)||(25951793-25951828)
chr4 (169-212)||(27725266-27725309)
chr4 (99-146)||(46013391-46013438)
chr4 (99-146)||(46247150-46247197)
chr4 (99-138)||(47970250-47970289)
chr4 (99-146)||(54277405-54277452)
chr4 (106-149)||(54575676-54575719)
chr4 (99-146)||(54986354-54986400)
chr4 (96-150)||(24160919-24160973)
chr4 (104-138)||(52645848-52645882)
chr4 (183-212)||(27123327-27123356)
chr4 (99-144)||(32066502-32066547)
chr4 (118-151)||(47800581-47800614)
chr4 (169-209)||(6987719-6987759)
chr4 (106-146)||(18630619-18630659)
chr4 (110-146)||(20936093-20936129)
chr4 (106-146)||(25487636-25487676)
chr4 (110-150)||(30770826-30770866)
chr4 (171-203)||(32071922-32071954)
chr4 (106-146)||(38478681-38478721)
chr4 (169-209)||(41097234-41097274)
chr4 (103-143)||(44610852-44610892)
[»] chr2 (46 HSPs)
chr2 (287-345)||(40412003-40412061)
chr2 (98-146)||(5045248-5045296)
chr2 (99-163)||(14277968-14278032)
chr2 (99-146)||(13864582-13864629)
chr2 (99-138)||(38239650-38239689)
chr2 (167-209)||(1742010-1742052)
chr2 (99-137)||(26522724-26522762)
chr2 (96-138)||(41033049-41033091)
chr2 (101-146)||(12215741-12215786)
chr2 (169-209)||(4550799-4550839)
chr2 (106-150)||(5133711-5133755)
chr2 (99-163)||(18962113-18962176)
chr2 (106-146)||(37033983-37034023)
chr2 (98-146)||(37474687-37474735)
chr2 (103-150)||(5998789-5998836)
chr2 (99-150)||(7825184-7825235)
chr2 (99-138)||(7936958-7936997)
chr2 (173-208)||(9878661-9878696)
chr2 (99-150)||(10150687-10150738)
chr2 (99-146)||(25609728-25609775)
chr2 (161-212)||(28803505-28803556)
chr2 (99-146)||(31461370-31461417)
chr2 (99-146)||(35329910-35329957)
chr2 (99-150)||(36114610-36114661)
chr2 (96-151)||(43141487-43141542)
chr2 (99-145)||(34054993-34055039)
chr2 (99-145)||(44606180-44606226)
chr2 (99-144)||(9478231-9478276)
chr2 (99-144)||(10190211-10190256)
chr2 (169-202)||(15377818-15377851)
chr2 (109-150)||(39567845-39567886)
chr2 (101-146)||(41240968-41241013)
chr2 (106-135)||(41809345-41809374)
chr2 (105-150)||(42457886-42457931)
chr2 (172-212)||(938485-938525)
chr2 (98-150)||(11393742-11393794)
chr2 (98-150)||(11410403-11410455)
chr2 (106-138)||(13866828-13866860)
chr2 (99-163)||(14209209-14209272)
chr2 (106-146)||(17952792-17952832)
chr2 (106-146)||(32098399-32098439)
chr2 (99-163)||(33267591-33267654)
chr2 (171-211)||(34652012-34652052)
chr2 (99-163)||(37053526-37053589)
chr2 (96-144)||(41039739-41039787)
chr2 (106-150)||(43985148-43985192)
[»] chr8 (22 HSPs)
chr8 (99-150)||(4558730-4558781)
chr8 (99-146)||(14482134-14482181)
chr8 (169-212)||(30987966-30988009)
chr8 (106-150)||(26215435-26215479)
chr8 (107-146)||(39392752-39392791)
chr8 (102-150)||(10062214-10062262)
chr8 (172-212)||(31875570-31875610)
chr8 (106-150)||(37353336-37353379)
chr8 (106-146)||(42597340-42597380)
chr8 (99-138)||(5226534-5226573)
chr8 (99-150)||(7646138-7646189)
chr8 (99-138)||(9928188-9928227)
chr8 (161-212)||(31915268-31915319)
chr8 (100-150)||(1112786-1112836)
chr8 (108-150)||(32976358-32976400)
chr8 (169-210)||(29168642-29168683)
chr8 (117-162)||(39866812-39866857)
chr8 (99-147)||(1664315-1664363)
chr8 (106-150)||(3936788-3936832)
chr8 (99-143)||(10114422-10114466)
chr8 (99-143)||(32506989-32507033)
chr8 (106-150)||(37444502-37444546)
[»] chr7 (45 HSPs)
chr7 (99-146)||(30496636-30496683)
chr7 (99-138)||(2223080-2223119)
chr7 (104-146)||(1417201-1417243)
chr7 (100-138)||(35809003-35809041)
chr7 (109-150)||(43152989-43153030)
chr7 (101-145)||(2727452-2727496)
chr7 (99-147)||(2894749-2894797)
chr7 (99-143)||(4591474-4591518)
chr7 (98-146)||(5276155-5276203)
chr7 (99-143)||(33894555-33894599)
chr7 (103-138)||(5272919-5272954)
chr7 (99-146)||(5373157-5373204)
chr7 (169-212)||(13960698-13960741)
chr7 (99-150)||(15328538-15328589)
chr7 (99-138)||(27481393-27481432)
chr7 (99-146)||(30133981-30134028)
chr7 (96-151)||(31002690-31002745)
chr7 (99-138)||(46223171-46223210)
chr7 (169-212)||(47427278-47427321)
chr7 (99-146)||(49060472-49060519)
chr7 (93-163)||(27378903-27378971)
chr7 (108-146)||(28178910-28178948)
chr7 (171-209)||(28340398-28340436)
chr7 (173-211)||(33645937-33645975)
chr7 (99-149)||(44241792-44241842)
chr7 (101-146)||(21453228-21453273)
chr7 (99-144)||(24973876-24973921)
chr7 (105-138)||(28702698-28702731)
chr7 (171-204)||(29290387-29290420)
chr7 (171-212)||(36598331-36598372)
chr7 (99-148)||(37832228-37832277)
chr7 (171-208)||(44686984-44687021)
chr7 (99-136)||(47006980-47007017)
chr7 (172-204)||(941595-941627)
chr7 (115-163)||(2999139-2999187)
chr7 (107-163)||(5006584-5006639)
chr7 (98-138)||(22388003-22388043)
chr7 (106-134)||(27492734-27492762)
chr7 (106-150)||(28613621-28613665)
chr7 (106-146)||(31341133-31341173)
chr7 (106-146)||(35536046-35536086)
chr7 (99-163)||(39551623-39551686)
chr7 (106-146)||(42656454-42656494)
chr7 (105-149)||(43250767-43250811)
chr7 (99-163)||(46081965-46082029)
[»] chr6 (29 HSPs)
chr6 (99-150)||(8349751-8349802)
chr6 (101-148)||(507154-507201)
chr6 (99-150)||(33911368-33911419)
chr6 (96-162)||(31964671-31964737)
chr6 (171-209)||(32917251-32917289)
chr6 (108-144)||(7354145-7354181)
chr6 (99-146)||(2514634-2514681)
chr6 (99-138)||(4247733-4247772)
chr6 (99-146)||(24774690-24774737)
chr6 (99-146)||(24836290-24836337)
chr6 (99-138)||(31461610-31461649)
chr6 (169-212)||(32171358-32171401)
chr6 (103-138)||(33500580-33500615)
chr6 (173-212)||(34939569-34939608)
chr6 (102-148)||(7931876-7931922)
chr6 (171-209)||(31338030-31338068)
chr6 (100-146)||(31672559-31672605)
chr6 (173-214)||(740859-740900)
chr6 (117-150)||(1402946-1402979)
chr6 (97-146)||(2456882-2456930)
chr6 (183-212)||(2460126-2460155)
chr6 (105-146)||(4420555-4420596)
chr6 (109-146)||(29269838-29269875)
chr6 (105-138)||(33787844-33787877)
chr6 (102-138)||(5554864-5554900)
chr6 (106-150)||(9093643-9093687)
chr6 (173-209)||(10616519-10616555)
chr6 (106-146)||(29274320-29274360)
chr6 (177-209)||(34404600-34404632)
[»] chr5 (42 HSPs)
chr5 (99-150)||(11835209-11835260)
chr5 (106-150)||(6593239-6593283)
chr5 (106-146)||(37063165-37063205)
chr5 (161-209)||(38047857-38047905)
chr5 (111-150)||(7853602-7853641)
chr5 (99-146)||(35135753-35135800)
chr5 (100-146)||(7096218-7096264)
chr5 (96-146)||(21782660-21782710)
chr5 (171-209)||(40499704-40499742)
chr5 (171-208)||(11457152-11457189)
chr5 (106-163)||(28586841-28586897)
chr5 (96-133)||(29802685-29802722)
chr5 (172-209)||(32172708-32172745)
chr5 (101-146)||(34975312-34975357)
chr5 (106-146)||(12407752-12407792)
chr5 (100-144)||(13224362-13224406)
chr5 (102-138)||(36638681-36638717)
chr5 (99-146)||(11095560-11095607)
chr5 (99-150)||(14932222-14932273)
chr5 (99-146)||(20982226-20982273)
chr5 (119-162)||(27105998-27106041)
chr5 (99-146)||(35095874-35095921)
chr5 (99-146)||(35960346-35960393)
chr5 (171-209)||(11700356-11700394)
chr5 (96-134)||(13508461-13508499)
chr5 (107-148)||(4014513-4014554)
chr5 (113-146)||(10303747-10303780)
chr5 (117-150)||(10363700-10363733)
chr5 (106-143)||(12460094-12460131)
chr5 (99-144)||(26516230-26516275)
chr5 (99-148)||(40048369-40048418)
chr5 (106-150)||(465893-465937)
chr5 (106-138)||(1773524-1773556)
chr5 (99-143)||(4991037-4991081)
chr5 (106-150)||(5963369-5963413)
chr5 (173-209)||(10152390-10152426)
chr5 (106-146)||(11054125-11054165)
chr5 (106-150)||(12425510-12425554)
chr5 (99-143)||(29588812-29588856)
chr5 (106-138)||(32172592-32172624)
chr5 (106-146)||(34690813-34690853)
chr5 (106-146)||(39128578-39128618)
[»] chr3 (33 HSPs)
chr3 (99-150)||(2128338-2128389)
chr3 (96-163)||(20192681-20192747)
chr3 (98-132)||(13804719-13804753)
chr3 (96-146)||(24605107-24605157)
chr3 (99-163)||(36783409-36783473)
chr3 (173-209)||(37273190-37273226)
chr3 (99-163)||(38462213-38462276)
chr3 (107-146)||(1395611-1395650)
chr3 (169-212)||(25182962-25183005)
chr3 (99-149)||(25183076-25183127)
chr3 (108-147)||(33120027-33120066)
chr3 (105-148)||(36445670-36445713)
chr3 (99-146)||(41028942-41028989)
chr3 (99-138)||(48597688-48597727)
chr3 (112-150)||(15304434-15304472)
chr3 (108-146)||(33882969-33883007)
chr3 (108-150)||(42809242-42809284)
chr3 (100-138)||(43116527-43116565)
chr3 (171-209)||(49772646-49772684)
chr3 (99-144)||(8142803-8142848)
chr3 (171-212)||(20192581-20192622)
chr3 (106-151)||(23793528-23793572)
chr3 (110-146)||(905061-905097)
chr3 (176-212)||(1810036-1810072)
chr3 (118-150)||(10101563-10101595)
chr3 (118-150)||(10212488-10212520)
chr3 (103-143)||(30669064-30669104)
chr3 (106-146)||(34958267-34958307)
chr3 (106-146)||(35394792-35394832)
chr3 (106-146)||(40122843-40122883)
chr3 (99-143)||(42084345-42084389)
chr3 (111-163)||(49586991-49587042)
chr3 (98-146)||(53457308-53457356)
[»] chr1 (43 HSPs)
chr1 (169-210)||(17631079-17631120)
chr1 (106-150)||(6976887-6976931)
chr1 (106-149)||(172665-172708)
chr1 (106-149)||(7028231-7028274)
chr1 (99-146)||(45999379-45999426)
chr1 (106-148)||(2462906-2462948)
chr1 (105-146)||(4276727-4276768)
chr1 (109-150)||(38578469-38578510)
chr1 (102-150)||(4256129-4256177)
chr1 (106-150)||(4549805-4549849)
chr1 (99-163)||(5756761-5756824)
chr1 (99-163)||(6074406-6074469)
chr1 (171-207)||(17628653-17628689)
chr1 (102-150)||(33339507-33339555)
chr1 (106-146)||(50319231-50319271)
chr1 (99-138)||(870977-871016)
chr1 (99-138)||(1662506-1662545)
chr1 (99-138)||(6659635-6659674)
chr1 (99-138)||(13037796-13037835)
chr1 (100-163)||(15360827-15360889)
chr1 (99-146)||(16982027-16982074)
chr1 (171-210)||(19412574-19412613)
chr1 (99-130)||(24857621-24857652)
chr1 (99-150)||(47002961-47003012)
chr1 (106-148)||(4700155-4700197)
chr1 (106-144)||(23895275-23895313)
chr1 (99-149)||(29793714-29793764)
chr1 (106-144)||(37591371-37591409)
chr1 (97-146)||(26184681-26184730)
chr1 (105-150)||(30815722-30815767)
chr1 (105-146)||(36151596-36151637)
chr1 (99-148)||(37593758-37593807)
chr1 (174-207)||(45327637-45327670)
chr1 (99-144)||(45769836-45769881)
chr1 (109-150)||(49557083-49557124)
chr1 (107-143)||(1725205-1725241)
chr1 (106-150)||(3887719-3887763)
chr1 (112-148)||(14630057-14630093)
chr1 (173-209)||(15579538-15579574)
chr1 (106-146)||(17420142-17420182)
chr1 (99-143)||(27140417-27140461)
chr1 (106-150)||(34619465-34619509)
chr1 (118-146)||(44936681-44936709)
[»] scaffold0590 (1 HSPs)
scaffold0590 (99-146)||(1165-1212)
[»] scaffold0275 (1 HSPs)
scaffold0275 (99-146)||(2763-2810)
[»] scaffold0053 (1 HSPs)
scaffold0053 (98-163)||(20110-20174)
[»] scaffold0654 (1 HSPs)
scaffold0654 (99-138)||(6736-6775)
[»] scaffold0091 (1 HSPs)
scaffold0091 (99-138)||(5951-5990)
[»] scaffold0014 (1 HSPs)
scaffold0014 (99-138)||(116655-116694)
[»] scaffold0199 (1 HSPs)
scaffold0199 (99-147)||(6756-6804)
[»] scaffold0147 (1 HSPs)
scaffold0147 (173-209)||(12682-12718)


Alignment Details
Target: chr4 (Bit Score: 309; Significance: 1e-174; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 7 - 345
Target Start/End: Complemental strand, 21683706 - 21683371
Alignment:
Q  7 acattaagcttcttctgtattgtgttggtaagctgaattgttcaataagttaagaagaatcaacaatctcttttaactttaaagccctaaattaagtgtt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||    
T  21683706 acattaagcttcttctgtattgtgttggtaagctgaattgttcaataagttaagaa---tcaacaatctcttttaactttgaagccctaaattaagtgtt 21683610  T
Q  107 tatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatatcctagatagcttatggacttgtcataagttgtttccataagct 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21683609 tatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatatcctagatagcttatggacttgtcataagttgttttcataagct 21683510  T
Q  207 ctctcacaattagtataacaagtgcttttctagtagataaatcataatattaacatgctaacaataggaagatagaacattaaaggatacaatttggcca 306  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21683509 ctctcacaaatggtataacaagtgcttttctagtagataaatcataatattaacatgctaacaataggaagatagaacattaaaggatacaatttggcca 21683410  T
Q  307 acacatgttgttatgatagctagaagtgaaagaatggtt 345  Q
    |||||||||||||||||||||||||||||||||||||||    
T  21683409 acacatgttgttatgatagctagaagtgaaagaatggtt 21683371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 51044598 - 51044550
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||    
T  51044598 ttaagtgtttatgtataagctatttctataacaaaagataaaataaagt 51044550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 30338723 - 30338667
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||| ||||||||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagtt-aaactgttttcatat 30338667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 4798702 - 4798650
Alignment:
Q  94 taaattaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||| |||||||    
T  4798702 taaattaagtgcttatgtataagctatttctatatcaaaagataaaataaagt 4798650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 21593149 - 21593102
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||    
T  21593149 taagtgcttatgtataaactatttctataactaaagataaaataaagt 21593102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 42641771 - 42641721
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaa 149  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||| |||||    
T  42641771 taagtgtttatgtataagctatttccataacaaaagataaaataatgttaa 42641721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 212
Target Start/End: Original strand, 2996627 - 2996668
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctctca 212  Q
    ||||||||||| ||||||||||||||| ||||||||||||||    
T  2996627 agcttatggacatgtcataagttgttttcataagctctctca 2996668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 41050628 - 41050665
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagat 136  Q
    |||||||| |||||||||||||||||||||||||||||    
T  41050628 taagtgttaatgtataaactatttctataacaaaagat 41050665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 6364088 - 6364128
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagt 6364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 7730644 - 7730692
Alignment:
Q  161 tatcctagatagcttatggacttgtcataagttgtttccataagctctc 209  Q
    |||||| || ||||||||||| ||||||||||||||||| |||||||||    
T  7730644 tatcctggagagcttatggacatgtcataagttgtttccttaagctctc 7730692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 26520360 - 26520316
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||||| ||||||||||||||||| | |||||||||||    
T  26520360 ttatgtataaactgtttctataacaaaagatgaaataaagttaaa 26520316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 45128441 - 45128409
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataa 138  Q
    |||||||||||||||||||||||||||||||||    
T  45128441 ttatgtataaactatttctataacaaaagataa 45128409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 54325175 - 54325112
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||| || |||||||||||||||||| ||||||||||| |||||| | |||| ||||||||||    
T  54325175 taagtgcttgtgtataaactatttctattacaaaagataaaataaag-tcaaactgttttcatat 54325112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 3155543 - 3155586
Alignment:
Q  107 tatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||    
T  3155543 tatgtataagctatttctatagcaaaagataaaataaagttaaa 3155586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 4071815 - 4071861
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  4071815 taagtgtttatatataa-ctatttctataacaaaagataaaataaagt 4071861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 4191671 - 4191710
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  4191671 taagtgcttatgtataagctatttctataacaaaagataa 4191710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 4471103 - 4471154
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||| ||||| ||||||||||| ||||||||||||||| |||||| ||||    
T  4471103 taagtgcttatgcataaactatttttataacaaaagataaaataaaggtaaa 4471154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 11389458 - 11389509
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||| ||||||||||| ||||||||||| |||||||||  ||||||||||    
T  11389458 taagtgcttatgtataaattatttctataaaaaaagataaagtaaagttaaa 11389509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 17884000 - 17884051
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||| | |||| ||| |||||||||||||||||||||| |||||||||||    
T  17884000 taagtgctcatgtgtaagctatttctataacaaaagataaaataaagttaaa 17884051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 20907105 - 20907152
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||||||| |||||| ||||| ||||||||| |||||||    
T  20907105 taagtgtttatgtataagctatttgtataagaaaagataaaataaagt 20907152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 23503491 - 23503542
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||| |||||||||| ||| ||||||||||||| |||| |||||||||||    
T  23503491 taagtgcttatgtataatctaattctataacaaaatataaaataaagttaaa 23503542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 24929429 - 24929472
Alignment:
Q  103 tgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||    
T  24929429 tgtttttgtatgaactatttctataacaaaagataaaataaagt 24929472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 98 - 133
Target Start/End: Original strand, 25951793 - 25951828
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaa 133  Q
    |||||||||| |||||||||||||||||||||||||    
T  25951793 ttaagtgtttgtgtataaactatttctataacaaaa 25951828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Original strand, 27725266 - 27725309
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctctca 212  Q
    |||| |||||||| ||||||||||| ||||||||||||||||||    
T  27725266 atagtttatggacatgtcataagttatttccataagctctctca 27725309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 46013438 - 46013391
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  46013438 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagt 46013391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 46247150 - 46247197
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||| ||||||||||||  |||||||||||| |||||||    
T  46247150 taagtgtttatgtgtaaactatttctggaacaaaagataaaataaagt 46247197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 47970250 - 47970289
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  47970250 taagtgcttatgtataagctatttctataacaaaagataa 47970289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 54277452 - 54277405
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| ||| ||||||||||| |||||||||||||||||| |||||||    
T  54277452 taagtatttgtgtataaactacttctataacaaaagataaaataaagt 54277405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 54575719 - 54575676
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaa 149  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||    
T  54575719 ttatgtataaactttttctataacaaaagataaaacaaagttaa 54575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 54986354 - 54986400
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  54986354 taagtttttatgtataagctatttctataacaaaa-ataagataaagt 54986400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 24160919 - 24160973
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||| || |||||||||| |||||||||||||||| ||||| || ||||||||    
T  24160919 aattaactgcttatgtataagctatttctataacaaaggataaaatcaagttaaa 24160973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 138
Target Start/End: Complemental strand, 52645882 - 52645848
Alignment:
Q  104 gtttatgtataaactatttctataacaaaagataa 138  Q
    |||||||||||| ||||||||||||||||||||||    
T  52645882 gtttatgtataagctatttctataacaaaagataa 52645848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 212
Target Start/End: Complemental strand, 27123356 - 27123327
Alignment:
Q  183 tgtcataagttgtttccataagctctctca 212  Q
    ||||||||||||||||||||||||||||||    
T  27123356 tgtcataagttgtttccataagctctctca 27123327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 32066547 - 32066502
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaa 144  Q
    |||||| |||||||||||||| || ||||||||||||||| |||||    
T  32066547 taagtgcttatgtataaactacttttataacaaaagataaaataaa 32066502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 151
Target Start/End: Original strand, 47800581 - 47800614
Alignment:
Q  118 tatttctataacaaaagataagataaagttaaaa 151  Q
    ||||||||||||||||||||| ||||||||||||    
T  47800581 tatttctataacaaaagataaaataaagttaaaa 47800614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 6987759 - 6987719
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctc 209  Q
    |||| |||||||| ||||||||||||| |||||||||||||    
T  6987759 atagtttatggacatgtcataagttgtatccataagctctc 6987719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 18630619 - 18630659
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| |||||||||||| |||||||||||||| |||||||    
T  18630619 ttatgcataaactatttcaataacaaaagataaaataaagt 18630659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 20936129 - 20936093
Alignment:
Q  110 gtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  20936129 gtatagactatttctataacaaaagataaaataaagt 20936093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 25487676 - 25487636
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| ||||||||||||||||| |||| |||||||    
T  25487676 ttatgtataagctatttctataacaaaaaataaaataaagt 25487636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 30770826 - 30770866
Alignment:
Q  110 gtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||||| ||||| ||||||||| |||||||||||    
T  30770826 gtataaactatttttataataaaagataaaataaagttaaa 30770866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 32071922 - 32071954
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataa 203  Q
    ||||||||||| |||||||||||||||||||||    
T  32071922 agcttatggacgtgtcataagttgtttccataa 32071954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 38478681 - 38478721
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| |||| |||||||||||||| |||||||||||||||    
T  38478681 ttatgaataagctatttctataacacaagataagataaagt 38478721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 41097274 - 41097234
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||||||| |||||| ||||||||| ||||||||||    
T  41097274 atagcttatggacatgtcattagttgtttctataagctctc 41097234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 44610852 - 44610892
Alignment:
Q  103 tgtttatgtataaactatttctataacaaaagataagataa 143  Q
    ||||||| ||| ||||||||| |||||||||||||||||||    
T  44610852 tgtttatatatgaactatttcaataacaaaagataagataa 44610892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 345
Target Start/End: Original strand, 40412003 - 40412061
Alignment:
Q  287 taaaggatacaatttggccaacacatgttgttatgatagctagaagtgaaagaatggtt 345  Q
    |||||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||    
T  40412003 taaaggatacaatttggctaacacatgttgttatgattgctagaagggaaataatggtt 40412061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 5045296 - 5045248
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  5045296 ttaagtgtttatgtataagctatttttataacaaaagataaaataaagt 5045248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 14278032 - 14277968
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||| |||||||||||||||||||||||| ||| || | ||||||| ||||| ||||||||||    
T  14278032 taagtgcttatgtataaactatttctataactaaacattaaataaagtcaaaactgttttcatat 14277968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 13864582 - 13864629
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  13864582 taagtgtttatgtataagctatttctataacaaaaggtaaaataaagt 13864629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 38239689 - 38239650
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  38239689 taagtgtttatgtataagctatttctataacaaaagataa 38239650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 209
Target Start/End: Complemental strand, 1742052 - 1742010
Alignment:
Q  167 agatagcttatggacttgtcataagttgtttccataagctctc 209  Q
    |||||||||||| || |||||||||||||||||||||||||||    
T  1742052 agatagcttatgcacatgtcataagttgtttccataagctctc 1742010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 26522762 - 26522724
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagata 137  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  26522762 taagtgcttatgtataaactatttctataacaaaagata 26522724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 138
Target Start/End: Complemental strand, 41033091 - 41033049
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||| |||||||||| ||||||||||||||||||||||    
T  41033091 aattaagtgcttatgtataagctatttctataacaaaagataa 41033049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 12215741 - 12215786
Alignment:
Q  101 agtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||    
T  12215741 agtgcttatgtataaactatttctacaacaaaagataaaataaagt 12215786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 4550799 - 4550839
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctc 209  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  4550799 atagcttatgaacatgtcataagttgtttccataagctctc 4550839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 5133711 - 5133755
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||    
T  5133711 ttatgtataagctatttctataacaaaagataaaataaagataaa 5133755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 18962176 - 18962113
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||| |||||||| | |||||| ||||||||||||||| |||||||| |||| ||||||||||    
T  18962176 taagtgcttatgtattagctatttttataacaaaagataaaataaagtt-aaactgttttcatat 18962113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 37033983 - 37034023
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  37033983 ttatgtataaactatttctataaaaaaagataaaataaagt 37034023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 37474687 - 37474735
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||| |||||||||||| ||||||||| |||| |||||||    
T  37474687 ttaagtgtttatgcataaactatttcgataacaaaaaataaaataaagt 37474735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 150
Target Start/End: Complemental strand, 5998836 - 5998789
Alignment:
Q  103 tgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||| ||||| |||||| ||||||||||||||| |||||||||||    
T  5998836 tgtttatatataagctatttttataacaaaagataaaataaagttaaa 5998789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 7825184 - 7825235
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||| ||||||| |||||| |||||||||||||||  ||||||||||    
T  7825184 taagtgtttctgtataagctatttttataacaaaagataaagtaaagttaaa 7825235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 7936958 - 7936997
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  7936958 taagtgcttatgtataaaccatttctataacaaaagataa 7936997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 9878696 - 9878661
Alignment:
Q  173 cttatggacttgtcataagttgtttccataagctct 208  Q
    ||||||||| ||||||||||||||||||||||||||    
T  9878696 cttatggacatgtcataagttgtttccataagctct 9878661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 10150687 - 10150738
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||||||||||  ||||||||||| ||||||||| |||| ||||||    
T  10150687 taagtgtttatgtataagttatttctataataaaagataaaataacgttaaa 10150738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 25609728 - 25609775
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||||||||| |||||||||||| ||||||||| |||||||    
T  25609728 taagtgcttatgtataagctatttctataagaaaagataaaataaagt 25609775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 28803556 - 28803505
Alignment:
Q  161 tatcctagatagcttatggacttgtcataagttgtttccataagctctctca 212  Q
    |||||| || ||||||||||| |||||||||||||||||||| | |||||||    
T  28803556 tatcctggagagcttatggacatgtcataagttgtttccatatgttctctca 28803505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 31461370 - 31461417
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||| ||||| |||||||||||||||||||||| |||||||    
T  31461370 taagtggttatatataagctatttctataacaaaagataaaataaagt 31461417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 35329957 - 35329910
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||| |||||||||||| |||||| ||||||| |||||||    
T  35329957 taagtgtttatgcataaactatttccataacataagataaaataaagt 35329910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 36114661 - 36114610
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||| ||||| |||| ||| |||||||||||||||||| |||||||||||    
T  36114661 taagtgcttatgcataacctagttctataacaaaagataaaataaagttaaa 36114610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 43141487 - 43141542
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaagataagataaagttaaaa 151  Q
    |||||| ||||||||||||| ||||||||| | ||| |||||| ||||||||||||    
T  43141487 aattaattgtttatgtataagctatttctagagcaatagataaaataaagttaaaa 43141542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 34055039 - 34054993
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaag 145  Q
    |||||| |||||||||  |||||||||||||||||||||| ||||||    
T  34055039 taagtgcttatgtataggctatttctataacaaaagataaaataaag 34054993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 44606226 - 44606180
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaag 145  Q
    ||||||||||||||||| ||||||  |||||||||||||| ||||||    
T  44606226 taagtgtttatgtataagctattttcataacaaaagataaaataaag 44606180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 9478231 - 9478276
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaa 144  Q
    ||||||||||||||||| ||||||||||||||  |||||| |||||    
T  9478231 taagtgtttatgtataagctatttctataacagtagataaaataaa 9478276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 10190211 - 10190256
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaa 144  Q
    |||||| ||||||||||||||||| ||||||||| ||||| |||||    
T  10190211 taagtgcttatgtataaactatttttataacaaaggataaaataaa 10190256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 15377818 - 15377851
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccata 202  Q
    ||||||||||||| ||||||||||||||||||||    
T  15377818 atagcttatggacgtgtcataagttgtttccata 15377851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 39567845 - 39567886
Alignment:
Q  109 tgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||  ||||||||||||||||||||| |||||||||||    
T  39567845 tgtataagatatttctataacaaaagataaaataaagttaaa 39567886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 41241013 - 41240968
Alignment:
Q  101 agtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||| |||||||||||||||| ||||||||||| |||| |||||||    
T  41241013 agtggttatgtataaactattcctataacaaaatataaaataaagt 41240968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 135
Target Start/End: Complemental strand, 41809374 - 41809345
Alignment:
Q  106 ttatgtataaactatttctataacaaaaga 135  Q
    ||||||||||||||||||||||||||||||    
T  41809374 ttatgtataaactatttctataacaaaaga 41809345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 42457886 - 42457931
Alignment:
Q  105 tttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||| |||||||||||  ||||||||| |||||||||||    
T  42457886 tttatgtataatctatttctatagtaaaagataaaataaagttaaa 42457931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 938525 - 938485
Alignment:
Q  172 gcttatggacttgtcataagttgtttccataagctctctca 212  Q
    ||||||||| ||||||||||||  |||||||||||||||||    
T  938525 gcttatggatttgtcataagtttcttccataagctctctca 938485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 11393794 - 11393742
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||| |||||||||| ||||||||||| |||||||||  |||||| ||||    
T  11393794 ttaagtgcttatgtataagctatttctataccaaaagatacaataaagctaaa 11393742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 11410455 - 11410403
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||| |||||||||| ||||||||||| |||||||||  |||||| ||||    
T  11410455 ttaagtgcttatgtataagctatttctataccaaaagatacaataaagctaaa 11410403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 13866828 - 13866860
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataa 138  Q
    |||||||||||||||||||||| ||||||||||    
T  13866828 ttatgtataaactatttctatagcaaaagataa 13866860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 14209209 - 14209272
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    ||||||||| ||| ||| ||||||| |||||||||||||| ||||| || |||| ||||||||||    
T  14209209 taagtgtttctgtctaagctatttcaataacaaaagataaaataaa-ttcaaactgttttcatat 14209272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 17952832 - 17952792
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||| ||||| |||||||||||||||||||||| |||||||    
T  17952832 ttatatataagctatttctataacaaaagataaaataaagt 17952792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 32098439 - 32098399
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||| ||||| |||||||||||||||||||||| |||||||    
T  32098439 ttatatataagctatttctataacaaaagataaaataaagt 32098399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 33267654 - 33267591
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||| |||||||||| ||||||||||||||||   ||| |||||||| |||| ||||||||||    
T  33267654 taagtgcttatgtataatctatttctataacaaacagtaaaataaagtt-aaactgttttcatat 33267591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 211
Target Start/End: Complemental strand, 34652052 - 34652012
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctctc 211  Q
    ||||||||||| |||||||||||||||| ||||||| ||||    
T  34652052 agcttatggacatgtcataagttgtttctataagctttctc 34652012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 37053526 - 37053589
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||| ||||||||| ||||||||||||||| || |||| |||||| | |||| ||||||||||    
T  37053526 taagtgcttatgtatagactatttctataacagaaaataaaataaag-tcaaactgttttcatat 37053589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 41039787 - 41039739
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaagataagataaa 144  Q
    ||||||||| |||||||||| |||||||| | ||||||||||| |||||    
T  41039787 aattaagtgcttatgtataagctatttctgtgacaaaagataaaataaa 41039739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 43985148 - 43985192
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||||||| |||||||||||||  ||| |||||||||||    
T  43985148 ttatgtataaactacttctataacaaaatttaatataaagttaaa 43985192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 4558730 - 4558781
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  4558730 taagtgtttatgtataagctatttctataataaaagataaaataaagttaaa 4558781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 14482134 - 14482181
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||    
T  14482134 taagtgcttatgtataaactatttctataacaaaagataaaataaagt 14482181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 30988009 - 30987966
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctctca 212  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  30988009 atagcttatggacatgtcataagttgtttccataagctctctca 30987966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 26215435 - 26215479
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||| |||||||||||||||||||||| |||||||||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaagttaaa 26215479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 146
Target Start/End: Complemental strand, 39392791 - 39392752
Alignment:
Q  107 tatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  39392791 tatgtataaactatttctataacaaaagataaaataaagt 39392752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 10062262 - 10062214
Alignment:
Q  102 gtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||||||  |||||||||| ||||||| ||||||||||||||    
T  10062262 gtgtttatgtataagttatttctataccaaaagaaaagataaagttaaa 10062214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 31875610 - 31875570
Alignment:
Q  172 gcttatggacttgtcataagttgtttccataagctctctca 212  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  31875610 gcttatggacatgtcataagttgtttccataagctttctca 31875570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 37353379 - 37353336
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||    
T  37353379 ttatgtacaaactatttctataacaaaagataa-ataaagttaaa 37353336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 42597340 - 42597380
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagt 42597380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 5226534 - 5226573
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  5226534 taagtgtttatgtataaacaatttcaataacaaaagataa 5226573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 7646138 - 7646189
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||| |||||||||| |||||||||||| ||||| ||| |||||||||||    
T  7646138 taagtggttatgtataagctatttctataagaaaaggtaaaataaagttaaa 7646189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 9928188 - 9928227
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  9928188 taagtgtttatgtataagttatttctataacaaaagataa 9928227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 31915319 - 31915268
Alignment:
Q  161 tatcctagatagcttatggacttgtcataagttgtttccataagctctctca 212  Q
    |||||| || |||||||||||||||||||||||||||  ||||||| |||||    
T  31915319 tatcctggagagcttatggacttgtcataagttgtttgtataagctttctca 31915268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 150
Target Start/End: Original strand, 1112786 - 1112836
Alignment:
Q  100 aagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||| |||||||||  |||||||||||||||||||||| |||| ||||||    
T  1112786 aagtgcttatgtatatgctatttctataacaaaagataaaataaggttaaa 1112836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 32976358 - 32976400
Alignment:
Q  108 atgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||  |||||||||||||||||||||| |||||||||||    
T  32976358 atgtatacgctatttctataacaaaagataaaataaagttaaa 32976400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 29168683 - 29168642
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctct 210  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||    
T  29168683 atagcttatggacatgtcataagctgttttcataagctctct 29168642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 39866857 - 39866812
Alignment:
Q  117 ctatttctataacaaaagataagataaagttaaaacagttttcata 162  Q
    |||| ||||||||||||||||| ||||||| ||||| |||||||||    
T  39866857 ctatctctataacaaaagataaaataaagtcaaaactgttttcata 39866812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 1664315 - 1664363
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagtt 147  Q
    ||||||||||| ||||| |||||| ||||||||||| ||| ||||||||    
T  1664315 taagtgtttatatataagctatttttataacaaaaggtaaaataaagtt 1664363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 3936788 - 3936832
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||| |||||||||||||||| ||||| |||||| ||||    
T  3936788 ttatgtataatctatttctataacaaaggataaaataaagctaaa 3936832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 10114422 - 10114466
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataa 143  Q
    |||||| |||||||||| ||||||||||| |||||||||| ||||    
T  10114422 taagtgcttatgtataagctatttctatagcaaaagataaaataa 10114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 32506989 - 32507033
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataa 143  Q
    |||||||||||||||||  |||||||| |||||||||||| ||||    
T  32506989 taagtgtttatgtataagttatttctacaacaaaagataaaataa 32507033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 37444546 - 37444502
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||| ||||| ||||||||||||||||  ||||||||||    
T  37444546 ttatgtataagctattactataacaaaagataaagtaaagttaaa 37444502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 30496636 - 30496683
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||    
T  30496636 taagtgtttatgtataaactatttctataacaaaatataaaataaagt 30496683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 2223080 - 2223119
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  2223080 taagtgtttatgtataagctatttctataacaaaagataa 2223119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 1417201 - 1417243
Alignment:
Q  104 gtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||||||||| ||||||||||||||| |||||||    
T  1417201 gtttatgtataaactatttatataacaaaagataaaataaagt 1417243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 35809041 - 35809003
Alignment:
Q  100 aagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  35809041 aagtgtttatgtataagctatttctataacaaaagataa 35809003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 43153030 - 43152989
Alignment:
Q  109 tgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaagttaaa 43152989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 2727496 - 2727452
Alignment:
Q  101 agtgtttatgtataaactatttctataacaaaagataagataaag 145  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||    
T  2727496 agtgttgatgtatagactatttctataacaaaagataaaataaag 2727452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 2894749 - 2894797
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagtt 147  Q
    |||||||| |||||||| ||||||||||||||||||||||  |||||||    
T  2894749 taagtgttcatgtataagctatttctataacaaaagataaattaaagtt 2894797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 4591474 - 4591518
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataa 143  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||    
T  4591474 taagtgtttatgtataagctatctctataacaaaagataaaataa 4591518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 5276155 - 5276203
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||| |||||||||| |||||| ||||||||||||||| |||||||    
T  5276155 ttaagtgcttatgtataagctatttttataacaaaagataacataaagt 5276203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 33894555 - 33894599
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataa 143  Q
    |||||| |||||||||| |||||||||||||||||||||| ||||    
T  33894555 taagtgcttatgtataagctatttctataacaaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 5272954 - 5272919
Alignment:
Q  103 tgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||||||||||||||||| |||||||||||||||    
T  5272954 tgtttatgtataaactatttatataacaaaagataa 5272919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 5373157 - 5373204
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||||||||  |||||||||||||||||||||| |||||||    
T  5373157 taagtgcttatgtatatgctatttctataacaaaagataaaataaagt 5373204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 13960741 - 13960698
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctctca 212  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||    
T  13960741 atagcttatggacttgttataagctgttttcataagctctctca 13960698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 15328538 - 15328589
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||| ||||| |||| |||||||||||| ||||||||| |||||||||||    
T  15328538 taagtgcttatgcataatctatttctataataaaagataaaataaagttaaa 15328589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 27481432 - 27481393
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  27481432 taagtgtttatgtataagctatttctataacaaaggataa 27481393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 30133981 - 30134028
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||||||| |||||| || |||||||||||| |||||||    
T  30133981 taagtgtttatgtataagctatttttacaacaaaagataaaataaagt 30134028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 31002690 - 31002745
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaagataagataaagttaaaa 151  Q
    ||||||||| |||||||||||||||||| |  ||||||||||| ||||||| ||||    
T  31002690 aattaagtgcttatgtataaactatttcaaccacaaaagataaaataaagtcaaaa 31002745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 46223210 - 46223171
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||||||| ||||||| ||||||||||||||    
T  46223210 taagtgtttatgtataagctatttccataacaaaagataa 46223171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 47427321 - 47427278
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctctca 212  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||    
T  47427321 atagcttatagagatgtcataagttgtttccataagctctctca 47427278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 49060472 - 49060519
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| ||||||||||| ||||||||||||||||| |||| |||||||    
T  49060472 taagtatttatgtataagctatttctataacaaaaaataaaataaagt 49060519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 27378971 - 27378903
Alignment:
Q  93 ctaaattaagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||||||||| |||||||||| |||||||||| ||||||| ||| |||||| || ||| ||||||||||    
T  27378971 ctaaattaagtgcttatgtataagctatttctattacaaaag-taaaataaag-tagaactgttttcatat 27378903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 28178910 - 28178948
Alignment:
Q  108 atgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagt 28178948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 28340436 - 28340398
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  28340436 agcttatggacatgtcataagttgttttcataagctctc 28340398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 33645975 - 33645937
Alignment:
Q  173 cttatggacttgtcataagttgtttccataagctctctc 211  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  33645975 cttatagacatgtcataagttgtttccataagctctctc 33645937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 44241792 - 44241842
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaa 149  Q
    ||||||| |||||||||  |||||||||||||| |||||| ||||||||||    
T  44241792 taagtgtgtatgtataagttatttctataacaacagataaaataaagttaa 44241842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 21453228 - 21453273
Alignment:
Q  101 agtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||| || || |||||||| |||||||||||||||||||||    
T  21453228 agtgtttatatacaagctatttctgtaacaaaagataagataaagt 21453273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 24973876 - 24973921
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaa 144  Q
    |||||| ||||||| || |||||||||||||||||||||| |||||    
T  24973876 taagtgcttatgtaaaagctatttctataacaaaagataaaataaa 24973921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 28702698 - 28702731
Alignment:
Q  105 tttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||| ||||||||||||||||||||||    
T  28702698 tttatgtataagctatttctataacaaaagataa 28702731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 204
Target Start/End: Original strand, 29290387 - 29290420
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataag 204  Q
    ||||||||||| ||||||||||||||||||||||    
T  29290387 agcttatggacatgtcataagttgtttccataag 29290420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 36598372 - 36598331
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctctca 212  Q
    |||||||| || ||||||||| ||||||||||||||||||||    
T  36598372 agcttatgaacatgtcataagatgtttccataagctctctca 36598331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 37832277 - 37832228
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagtta 148  Q
    |||||| || ||||||||||||||||||| ||||| |||| |||||||||    
T  37832277 taagtgcttgtgtataaactatttctatagcaaaatataaaataaagtta 37832228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 44686984 - 44687021
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctct 208  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  44686984 agctcatggacatgtcataagttgtttccataagctct 44687021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 47006980 - 47007017
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagat 136  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  47006980 taagtgcttatgtataaactttttctataacaaaagat 47007017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 941595 - 941627
Alignment:
Q  172 gcttatggacttgtcataagttgtttccataag 204  Q
    |||||||||| ||||||||||||||||||||||    
T  941595 gcttatggacatgtcataagttgtttccataag 941627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 2999139 - 2999187
Alignment:
Q  115 aactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||||||||||||||||||||| ||||||| ||| |  |||||||||    
T  2999139 aactatttctataacaaaagataaaataaagtcaaaccgtttttcatat 2999187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 5006639 - 5006584
Alignment:
Q  107 tatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    ||||||||| ||||| |||||||||||||||| |||||| | |||| ||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaag-tcaaactgttttcatat 5006584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 138
Target Start/End: Complemental strand, 22388043 - 22388003
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||| ||||| |||| ||||||||||||||||||||||    
T  22388043 ttaagtgcttatggataagctatttctataacaaaagataa 22388003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 134
Target Start/End: Original strand, 27492734 - 27492762
Alignment:
Q  106 ttatgtataaactatttctataacaaaag 134  Q
    |||||||||||||||||||||||||||||    
T  27492734 ttatgtataaactatttctataacaaaag 27492762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 28613665 - 28613621
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||| |||||| ||||||||||||||| | |||||||||    
T  28613665 ttatgtataagctatttttataacaaaagataaaacaaagttaaa 28613621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 31341133 - 31341173
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| |||||| ||||||||||||||| |||||||    
T  31341133 ttatgtataagctatttgtataacaaaagataaaataaagt 31341173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 35536046 - 35536086
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| |||||||||||||| ||||||| |||||||    
T  35536046 ttatgtataagctatttctataacataagataaaataaagt 35536086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 39551686 - 39551623
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    ||||| |||| |||||| |||||||||||||||||||||   ||||| |||||| ||||||||||    
T  39551686 taagtatttaagtataagctatttctataacaaaagatatactaaag-taaaactgttttcatat 39551623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 42656454 - 42656494
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||| ||||| |||||||||||||||||||||| |||||||    
T  42656454 ttatatataagctatttctataacaaaagataaaataaagt 42656494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 149
Target Start/End: Complemental strand, 43250811 - 43250767
Alignment:
Q  105 tttatgtataaactatttctataacaaaagataagataaagttaa 149  Q
    ||||||||||| |||| |||| |||||||||||| ||||||||||    
T  43250811 tttatgtataagctatgtctagaacaaaagataaaataaagttaa 43250767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 46081965 - 46082029
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||| |||| ||||| ||||||||||||| |||| ||| | ||||| ||||| ||||||||||    
T  46081965 taagtgattatatataagctatttctataacgaaagttaaaacaaagtcaaaactgttttcatat 46082029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 8349802 - 8349751
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  8349802 taagtgtttgtgtataaactatttctctaacaaaagataaaataaagttaaa 8349751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 507154 - 507201
Alignment:
Q  101 agtgtttatgtataaactatttctataacaaaagataagataaagtta 148  Q
    |||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  507154 agtgcttatgtataaattatttctataacaaaagataaaataaagtta 507201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 33911419 - 33911368
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||||||||| |||||| ||||||||||||| | |||||||||||    
T  33911419 taagtgtttatgtataatctatttttataacaaaagatcaaataaagttaaa 33911368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 31964737 - 31964671
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcata 162  Q
    ||||||||| || ||||||||||||| ||| || ||||||||| ||||||| ||||| |||||||||    
T  31964737 aattaagtggttttgtataaactattcctacaataaaagataaaataaagtcaaaactgttttcata 31964671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 32917251 - 32917289
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  32917251 agcttatggacatgtcataagttgtttccataagctctc 32917289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 7354145 - 7354181
Alignment:
Q  108 atgtataaactatttctataacaaaagataagataaa 144  Q
    ||||||||||||||||||||||||||||||| |||||    
T  7354145 atgtataaactatttctataacaaaagataaaataaa 7354181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 2514634 - 2514681
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||||||||| |||||||||||| ||||||||| |||||||    
T  2514634 taagtgcttatgtataagctatttctataataaaagataaaataaagt 2514681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 4247772 - 4247733
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  4247772 taagtgcttatgtataagctatttctataacaaaagataa 4247733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 24774690 - 24774737
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||| ||||||||||||||||||||||| |||| |||||||    
T  24774690 taagtgcttatatataaactatttctataacaaaatataaaataaagt 24774737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 24836337 - 24836290
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| |||||||||||  ||||||||||||||||||||| |||||||    
T  24836337 taagtatttatgtataagttatttctataacaaaagataaaataaagt 24836290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 31461610 - 31461649
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  31461610 taagtgcttatgtataagctatttctataacaaaagataa 31461649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 32171401 - 32171358
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctctca 212  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||    
T  32171401 atagcttctggacttgtcataagctgttttcataagctctctca 32171358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 33500615 - 33500580
Alignment:
Q  103 tgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||| ||||||||||||||||||||||    
T  33500615 tgtttatgtataagctatttctataacaaaagataa 33500580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 173 - 212
Target Start/End: Original strand, 34939569 - 34939608
Alignment:
Q  173 cttatggacttgtcataagttgtttccataagctctctca 212  Q
    |||| |||| ||||||||||||||||||||||||||||||    
T  34939569 cttacggacgtgtcataagttgtttccataagctctctca 34939608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 7931922 - 7931876
Alignment:
Q  102 gtgtttatgtataaactatttctataacaaaagataagataaagtta 148  Q
    ||||||||||||||||||||||||  ||||||||||  |||||||||    
T  7931922 gtgtttatgtataaactatttctacgacaaaagatataataaagtta 7931876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 31338030 - 31338068
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  31338030 agcttatggacatgtcataagttgttttcataagctctc 31338068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 31672605 - 31672559
Alignment:
Q  100 aagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||||||||||| || |||||| |||| |||||||    
T  31672605 aagtgtttatgtataaactatttccatgacaaaaaataaaataaagt 31672559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 740900 - 740859
Alignment:
Q  173 cttatggacttgtcataagttgtttccataagctctctcaca 214  Q
    |||||| || |||||||||||||||||| |||||||||||||    
T  740900 cttatgaacatgtcataagttgtttccacaagctctctcaca 740859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 1402946 - 1402979
Alignment:
Q  117 ctatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||||||||||||||| |||||||||||    
T  1402946 ctatttctataacaaaagataaaataaagttaaa 1402979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 2456882 - 2456930
Alignment:
Q  97 attaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||| |||||||||||||||||| ||||| |||||||| |||||||    
T  2456882 attaagtgcttatgtataaactatttcgataac-aaagataaaataaagt 2456930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 212
Target Start/End: Complemental strand, 2460155 - 2460126
Alignment:
Q  183 tgtcataagttgtttccataagctctctca 212  Q
    ||||||||||||||||||||||||||||||    
T  2460155 tgtcataagttgtttccataagctctctca 2460126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 4420555 - 4420596
Alignment:
Q  105 tttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||| ||| |||||||||||||||||| |||||||    
T  4420555 tttatgtataagctacttctataacaaaagataaaataaagt 4420596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 29269838 - 29269875
Alignment:
Q  109 tgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  29269838 tgtataaactatttctataacagaagataaaataaagt 29269875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 138
Target Start/End: Complemental strand, 33787877 - 33787844
Alignment:
Q  105 tttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||||||||||||||||||| ||||    
T  33787877 tttatgtataaactatttctataacaaaatataa 33787844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 5554900 - 5554864
Alignment:
Q  102 gtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||||  |||||||||||||||||||||    
T  5554900 gtgtttatgtataagttatttctataacaaaagataa 5554864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 9093687 - 9093643
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaa 9093643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 10616555 - 10616519
Alignment:
Q  173 cttatggacttgtcataagttgtttccataagctctc 209  Q
    |||| |||| |||||||||||||||||||||||||||    
T  10616555 cttacggacatgtcataagttgtttccataagctctc 10616519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 29274360 - 29274320
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| ||||||||||| |||||||||| |||||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagt 29274320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 209
Target Start/End: Original strand, 34404600 - 34404632
Alignment:
Q  177 tggacttgtcataagttgtttccataagctctc 209  Q
    ||||| |||||||||||||||||||||||||||    
T  34404600 tggacatgtcataagttgtttccataagctctc 34404632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 11835209 - 11835260
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  11835209 taagtgtttatgtataaaccatttttataacaaaagataaaataaagttaaa 11835260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 6593239 - 6593283
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||||| |||||||||||||||||||| |||||||||||    
T  6593239 ttatgtataaacaatttctataacaaaagataaaataaagttaaa 6593283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 37063205 - 37063165
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  37063205 ttatgtataaactatttctataacaaaagataaaataaagt 37063165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 38047905 - 38047857
Alignment:
Q  161 tatcctagatagcttatggacttgtcataagttgtttccataagctctc 209  Q
    |||||| || ||||||||||| |||||||||||||||||||||||||||    
T  38047905 tatcctggagagcttatggacatgtcataagttgtttccataagctctc 38047857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 7853602 - 7853641
Alignment:
Q  111 tataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  7853602 tataaactatttctataacaaaagataaaataaagttaaa 7853641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 35135800 - 35135753
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||||  ||||||||||||||||||||| |||||||    
T  35135800 taagtgtttatgtataagatatttctataacaaaagataaaataaagt 35135753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 7096264 - 7096218
Alignment:
Q  100 aagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||    
T  7096264 aagtgcttatgtataagctatttctataacaaaagataaaataaagt 7096218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 21782710 - 21782660
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||| ||| |||||||||||||||||| ||| |||||||    
T  21782710 aattaagtgtttatgtttaagctatttctataacaaaagctaaaataaagt 21782660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 40499742 - 40499704
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  40499742 agcttatggacatgtcataagttgtttccataagctctc 40499704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 11457152 - 11457189
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctct 208  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  11457152 agcttatggacatgtcataagttgtttccataagctct 11457189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 28586897 - 28586841
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    ||||||||| ||||||||||||||||||||||| |||||| | |||| ||||||||||    
T  28586897 ttatgtatacactatttctataacaaaagataaaataaag-tcaaactgttttcatat 28586841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 96 - 133
Target Start/End: Original strand, 29802685 - 29802722
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaa 133  Q
    |||||||||||||||| |||||||||||||||||||||    
T  29802685 aattaagtgtttatgtgtaaactatttctataacaaaa 29802722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 32172708 - 32172745
Alignment:
Q  172 gcttatggacttgtcataagttgtttccataagctctc 209  Q
    |||||||||| |||||||||||||||||||||||||||    
T  32172708 gcttatggacatgtcataagttgtttccataagctctc 32172745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 34975312 - 34975357
Alignment:
Q  101 agtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||    
T  34975312 agtgattatgtataaactatttctataacaaaagatgaaataaagt 34975357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 12407792 - 12407752
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 13224362 - 13224406
Alignment:
Q  100 aagtgtttatgtataaactatttctataacaaaagataagataaa 144  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||    
T  13224362 aagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 138
Target Start/End: Original strand, 36638681 - 36638717
Alignment:
Q  102 gtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||| |||||||||||||||||||||||||||||||    
T  36638681 gtgttaatgtataaactatttctataacaaaagataa 36638717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 11095607 - 11095560
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| ||||||||||||||||||||||||||| ||||  |||||||    
T  11095607 taagtgattatgtataaactatttctataacaaatgatacaataaagt 11095560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Original strand, 14932222 - 14932273
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||| |||||||| |||||| |||| |||||||||| |||||||||||    
T  14932222 taagtgttcatgtataatctatttttatagcaaaagataaaataaagttaaa 14932273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 20982273 - 20982226
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||||||||| |||||||||||||||| ||||| |||||||    
T  20982273 taagtgcttatgtataagctatttctataacaaaggataaaataaagt 20982226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 119 - 162
Target Start/End: Complemental strand, 27106041 - 27105998
Alignment:
Q  119 atttctataacaaaagataagataaagttaaaacagttttcata 162  Q
    |||||||||||||||||||| ||||||||||||  |||||||||    
T  27106041 atttctataacaaaagataaaataaagttaaaagcgttttcata 27105998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 35095921 - 35095874
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||| | |||||||||||||||||||||||||| |||||||    
T  35095921 taagtgcttatatttaaactatttctataacaaaagataaaataaagt 35095874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 35960346 - 35960393
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| |||||| ||||||||||||||||| ||||||||| |||||||    
T  35960346 taagtatttatgcataaactatttctataataaaagataaaataaagt 35960393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 11700394 - 11700356
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  11700394 agcttatggacatgtcataagttgtttccataaactctc 11700356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 13508461 - 13508499
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaag 134  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  13508461 aattaagtgtttatgtttaagctatttctataacaaaag 13508499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 148
Target Start/End: Complemental strand, 4014554 - 4014513
Alignment:
Q  107 tatgtataaactatttctataacaaaagataagataaagtta 148  Q
    ||||||||| ||||||||||| |||||||||| |||||||||    
T  4014554 tatgtataagctatttctatagcaaaagataaaataaagtta 4014513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 113 - 146
Target Start/End: Original strand, 10303747 - 10303780
Alignment:
Q  113 taaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||||||||||||| |||||||    
T  10303747 taaactatttctataacaaaagataaaataaagt 10303780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 10363700 - 10363733
Alignment:
Q  117 ctatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||||||||||||||| |||||||||||    
T  10363700 ctatttctataacaaaagataaaataaagttaaa 10363733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 12460131 - 12460094
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataa 143  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  12460131 ttatgtataagctatttctataacaaaagataaaataa 12460094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 26516230 - 26516275
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaa 144  Q
    |||||| |||||||||| ||||||||| |||||||||||| |||||    
T  26516230 taagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 40048418 - 40048369
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagtta 148  Q
    |||||| ||||||||||  | ||||||||||||||||||| |||||||||    
T  40048418 taagtgcttatgtataagttgtttctataacaaaagataaaataaagtta 40048369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 465893 - 465937
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||    
T  465893 ttatatataagctatttctatgacaaaagataaaataaagttaaa 465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 1773556 - 1773524
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataa 138  Q
    |||||||||| ||||||||||||||||||||||    
T  1773556 ttatgtataagctatttctataacaaaagataa 1773524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 4991081 - 4991037
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataa 143  Q
    ||||||||| ||||||| |||||| ||||||||||||||| ||||    
T  4991081 taagtgtttgtgtataagctatttttataacaaaagataacataa 4991037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 5963413 - 5963369
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||| |||||||||||||||  |||||||| |||||||||||    
T  5963413 ttatgtacaaactatttctataatgaaagataaaataaagttaaa 5963369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 10152390 - 10152426
Alignment:
Q  173 cttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  10152390 cttatggacatgtcataagttgttttcataagctctc 10152426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 11054125 - 11054165
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| |||||||||||| ||||||||| |||||||    
T  11054125 ttatgtataagctatttctataataaaagataaaataaagt 11054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 12425510 - 12425554
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||||||||| ||||  ||||||||| |||||||||||    
T  12425510 ttatgtataaactatttatatagtaaaagataaaataaagttaaa 12425554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 29588812 - 29588856
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataa 143  Q
    |||||| |||||||||| ||||||||||||||||| |||| ||||    
T  29588812 taagtgcttatgtataagctatttctataacaaaatataaaataa 29588856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 32172592 - 32172624
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataa 138  Q
    |||||||||||||||||||| ||||||||||||    
T  32172592 ttatgtataaactatttctacaacaaaagataa 32172624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 34690813 - 34690853
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||  |||||||||||||||||||||| |||||||    
T  34690813 ttatgtatacgctatttctataacaaaagataaaataaagt 34690853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 39128578 - 39128618
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| ||| |||||||||||||||||| |||||||    
T  39128578 ttatgtataagctaattctataacaaaagataaaataaagt 39128618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 2128389 - 2128338
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||    
T  2128389 taagcgtttatgtataagctatttctataacaaaagataaaataaagttaaa 2128338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 163
Target Start/End: Complemental strand, 20192747 - 20192681
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    ||||||||| |||||||||| |||||| ||||||||||||||| |||||| | |||||||||||||||    
T  20192747 aattaagtgcttatgtataagctatttatataacaaaagataaaataaag-tcaaacagttttcatat 20192681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 13804719 - 13804753
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaa 132  Q
    |||||||||||||||||||||||||||||||||||    
T  13804719 ttaagtgtttatgtataaactatttctataacaaa 13804753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 24605157 - 24605107
Alignment:
Q  96 aattaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||||||||||  ||||||||||||||||||| | |||||||    
T  24605157 aattaagtgtttatgtataagttatttctataacaaaagatgaaataaagt 24605107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 36783473 - 36783409
Alignment:
Q  99 taagtgtttatgtataaa-ctatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||||||||||||||| ||||||||||| |||||||||| |||||| |||||  ||||||||||    
T  36783473 taagtgtttatgtataaagctatttctataccaaaagataaaataaag-taaaattgttttcatat 36783409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 37273190 - 37273226
Alignment:
Q  173 cttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||| |||||||||||||||||||||||||||    
T  37273190 cttatggacatgtcataagttgtttccataagctctc 37273226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 38462213 - 38462276
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    ||||||||||| ||||| ||||||||||| |||||||||| |||||| | |||| ||||||||||    
T  38462213 taagtgtttatttataagctatttctataccaaaagataaaataaag-tcaaactgttttcatat 38462276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 1395611 - 1395650
Alignment:
Q  107 tatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||| |||||||||||||||||||||| |||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagt 1395650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 25183005 - 25182962
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctctca 212  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||    
T  25183005 atagcttatggatatgtcataagttgttttcataagctctctca 25182962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 25183127 - 25183076
Alignment:
Q  99 taagtgttta-tgtataaactatttctataacaaaagataagataaagttaa 149  Q
    |||||||||| |||||||||||||| ||||||||||||| | ||||||||||    
T  25183127 taagtgtttaatgtataaactatttttataacaaaagattaaataaagttaa 25183076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 108 - 147
Target Start/End: Original strand, 33120027 - 33120066
Alignment:
Q  108 atgtataaactatttctataacaaaagataagataaagtt 147  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  33120027 atgtataaactatttctttaacaaaagataatataaagtt 33120066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 105 - 148
Target Start/End: Original strand, 36445670 - 36445713
Alignment:
Q  105 tttatgtataaactatttctataacaaaagataagataaagtta 148  Q
    ||||||||||| ||||||||||||||||||| || |||||||||    
T  36445670 tttatgtataagctatttctataacaaaagagaaaataaagtta 36445713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 41028989 - 41028942
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||||||||| ||||||||||||||||||| || |||||||    
T  41028989 taagtgcttatgtataagctatttctataacaaaagaaaaaataaagt 41028942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 48597727 - 48597688
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  48597727 taagtgcttatgtttaaactatttctataacaaaagataa 48597688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 150
Target Start/End: Complemental strand, 15304472 - 15304434
Alignment:
Q  112 ataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaa 15304434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 33882969 - 33883007
Alignment:
Q  108 atgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||| ||||||||||||||||||||| |||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaagt 33883007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 42809242 - 42809284
Alignment:
Q  108 atgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||| |||||||||||||||||||||| ||| |||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaa 42809284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 138
Target Start/End: Complemental strand, 43116565 - 43116527
Alignment:
Q  100 aagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  43116565 aagtgtttatgtgtaagctatttctataacaaaagataa 43116527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 49772684 - 49772646
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  49772684 agcttatggacatctcataagttgtttccataagctctc 49772646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 8142848 - 8142803
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaa 144  Q
    ||||||||||||||||| |||||| |||| |||||||||| |||||    
T  8142848 taagtgtttatgtataagctatttttatatcaaaagataaaataaa 8142803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 20192622 - 20192581
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctctca 212  Q
    ||||||||||| ||||||||| |||||| |||||||||||||    
T  20192622 agcttatggacatgtcataagctgtttctataagctctctca 20192581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 23793528 - 23793572
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaaa 151  Q
    ||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  23793528 ttatgtataaactattt-tataacaaaagataaaataaagtcaaaa 23793572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 905097 - 905061
Alignment:
Q  110 gtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||||||||||||||||||||| |||||||    
T  905097 gtataagctatttctataacaaaagataaaataaagt 905061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 1810036 - 1810072
Alignment:
Q  176 atggacttgtcataagttgtttccataagctctctca 212  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  1810036 atggacatgtcataagttgtttccgtaagctctctca 1810072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 10101595 - 10101563
Alignment:
Q  118 tatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||||||||||||| |||||||||||    
T  10101595 tatttctataacaaaagataaaataaagttaaa 10101563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 10212520 - 10212488
Alignment:
Q  118 tatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||||||||||||| |||||||||||    
T  10212520 tatttctataacaaaagataaaataaagttaaa 10212488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 143
Target Start/End: Complemental strand, 30669104 - 30669064
Alignment:
Q  103 tgtttatgtataaactatttctataacaaaagataagataa 143  Q
    ||||||||||||| |||||| ||||||||||||||| ||||    
T  30669104 tgtttatgtataagctatttttataacaaaagataaaataa 30669064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 34958267 - 34958307
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||| ||||||||||||||||||| ||||||| |||||||    
T  34958267 ttatgaataaactatttctataacacaagataaaataaagt 34958307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 35394832 - 35394792
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| |||||||||||| ||||||||| |||||||    
T  35394832 ttatgtataatctatttctataataaaagataaaataaagt 35394792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 40122883 - 40122843
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| ||||||| |||||||||||||| |||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagt 40122843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 42084389 - 42084345
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataa 143  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||||    
T  42084389 taagtgtctatgtataagctatttctataacaaaggataaaataa 42084345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 111 - 163
Target Start/End: Complemental strand, 49587042 - 49586991
Alignment:
Q  111 tataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    ||||| |||||||||||||||||||||| |||||| | |||| ||||||||||    
T  49587042 tataagctatttctataacaaaagataaaataaag-tcaaactgttttcatat 49586991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 53457308 - 53457356
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||| |||||| ||| ||| |||||||||||||| |||||||    
T  53457308 ttaagtgtttacgtataagctacttcgataacaaaagataaaataaagt 53457356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 17631120 - 17631079
Alignment:
Q  169 atagcttatggacttgtcataagttgtttccataagctctct 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  17631120 atagcttatggacatgtcataagttgtttccataagctctct 17631079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 6976887 - 6976931
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||||||  |||||||||||||||||||||||||||||||||    
T  6976887 ttatgtataagatatttctataacaaaagataagataaagttaaa 6976931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 149
Target Start/End: Complemental strand, 172708 - 172665
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaa 149  Q
    |||||||||| |||||||||||||||||||||| ||||||||||    
T  172708 ttatgtataagctatttctataacaaaagataacataaagttaa 172665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 149
Target Start/End: Original strand, 7028231 - 7028274
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaa 149  Q
    |||||||||||||||||||||| |||||||||| ||||||||||    
T  7028231 ttatgtataaactatttctatagcaaaagataaaataaagttaa 7028274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 45999426 - 45999379
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| | |||||||| ||||||||||||||||||||||||||||||    
T  45999426 taagtgctcatgtataagctatttctataacaaaagataagataaagt 45999379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 2462906 - 2462948
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagtta 148  Q
    |||||||||| ||||||||||||||||| ||||||||||||||    
T  2462906 ttatgtataagctatttctataacaaaatataagataaagtta 2462948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 4276768 - 4276727
Alignment:
Q  105 tttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  4276768 tttaagtataaactatttctataacaaaagataatataaagt 4276727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 38578469 - 38578510
Alignment:
Q  109 tgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  38578469 tgtataagctatttctataacaaaagataacataaagttaaa 38578510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 4256177 - 4256129
Alignment:
Q  102 gtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||||||| ||||||||| |||||||||||  |||||||||||    
T  4256177 gtgtttatgtataagctatttctacaacaaaagatacaataaagttaaa 4256129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 4549805 - 4549849
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||| || |||||||||||||||||||||| |||||||||||    
T  4549805 ttatgtacaagctatttctataacaaaagataaaataaagttaaa 4549849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 5756824 - 5756761
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||||| | |||||| |||||||||||||||||||| | |||||||| |||| ||||||||||    
T  5756824 taagtgttcacgtataagctatttctataacaaaagatgatataaagtt-aaactgttttcatat 5756761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 6074406 - 6074469
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||||| | |||||| |||||||||||||||||||| | |||||||| |||| ||||||||||    
T  6074406 taagtgttcacgtataagctatttctataacaaaagatgatataaagtt-aaactgttttcatat 6074469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 17628653 - 17628689
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctc 207  Q
    ||||||||||| |||||||||||||||||||||||||    
T  17628653 agcttatggacatgtcataagttgtttccataagctc 17628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 150
Target Start/End: Complemental strand, 33339555 - 33339507
Alignment:
Q  102 gtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||||||| ||||||||||| |||||||||| || ||||||||    
T  33339555 gtgtttatgtataagctatttctataccaaaagataaaatgaagttaaa 33339507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 50319231 - 50319271
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagt 50319271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 870977 - 871016
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  870977 taagtgcttatgtataaactatttttataacaaaagataa 871016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 1662506 - 1662545
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  1662506 taagtgtttatgtataaactacttctataacgaaagataa 1662545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 6659635 - 6659674
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||||||||||||||||||| ||||||||||    
T  6659635 taagtgcttatgtataaactatttctatagcaaaagataa 6659674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 13037796 - 13037835
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  13037796 taagtgcttatgtataagctatttctataacaaaagataa 13037835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 15360827 - 15360889
Alignment:
Q  100 aagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    |||||||||||||| |  ||||||||||||||||||||| |||||| | |||| ||||||||||    
T  15360827 aagtgtttatgtattagttatttctataacaaaagataaaataaag-tcaaactgttttcatat 15360889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 16982074 - 16982027
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||||  |||||| |||||||||||||| |||||||    
T  16982074 taagtgtttatgtataacttatttcgataacaaaagataaaataaagt 16982027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 210
Target Start/End: Complemental strand, 19412613 - 19412574
Alignment:
Q  171 agcttatggacttgtcataagttgtttccataagctctct 210  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  19412613 agcttatggacatgtcataagttgtttccataaactctct 19412574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 24857652 - 24857621
Alignment:
Q  99 taagtgtttatgtataaactatttctataaca 130  Q
    ||||||||||||||||||||||||||||||||    
T  24857652 taagtgtttatgtataaactatttctataaca 24857621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 47003012 - 47002961
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||||| ||||| |||||| |||| ||||||||| |||||||||||    
T  47003012 taagtgtttatgcataaattatttcgataataaaagataaaataaagttaaa 47002961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 4700197 - 4700155
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagtta 148  Q
    ||||||| || |||||||||||||||||||||| |||||||||    
T  4700197 ttatgtacaagctatttctataacaaaagataaaataaagtta 4700155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 23895275 - 23895313
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaa 144  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  23895275 ttatgtataagctatttctataacaaaagataaaataaa 23895313  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 29793714 - 29793764
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagttaa 149  Q
    |||||| ||||||| || ||||||||| |||||||||||| ||||||||||    
T  29793714 taagtgcttatgtacaagctatttctacaacaaaagataacataaagttaa 29793764  T

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Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 37591371 - 37591409
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaa 144  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  37591371 ttatgtataaactatttctataataaaagataaaataaa 37591409  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 26184681 - 26184730
Alignment:
Q  97 attaagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||||  ||||||||||||||||||||||| ||||| ||| |||||||    
T  26184681 attaagtacttatgtataaactatttctataagaaaaggtaaaataaagt 26184730  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 30815767 - 30815722
Alignment:
Q  105 tttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    ||||||| ||| || ||||||||||||||||||| |||||||||||    
T  30815767 tttatgtctaagctttttctataacaaaagataaaataaagttaaa 30815722  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 36151637 - 36151596
Alignment:
Q  105 tttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||| ||||||| |||||||||||||| |||||||    
T  36151637 tttatgtataagctatttcaataacaaaagataaaataaagt 36151596  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 37593807 - 37593758
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagtta 148  Q
    |||||||||||||||||  ||||||||||||| ||||||| |||| ||||    
T  37593807 taagtgtttatgtataaggtatttctataacacaagataaaataatgtta 37593758  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 45327637 - 45327670
Alignment:
Q  174 ttatggacttgtcataagttgtttccataagctc 207  Q
    |||||||| |||||||||||||||||||||||||    
T  45327637 ttatggacatgtcataagttgtttccataagctc 45327670  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 45769881 - 45769836
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaa 144  Q
    |||||| |||||| |||| ||||||||||||||||||||| |||||    
T  45769881 taagtgcttatgtgtaaattatttctataacaaaagataaaataaa 45769836  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 49557083 - 49557124
Alignment:
Q  109 tgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||  ||||||||||||||||||||| |||||||||||    
T  49557083 tgtataagttatttctataacaaaagataaaataaagttaaa 49557124  T

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Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 1725241 - 1725205
Alignment:
Q  107 tatgtataaactatttctataacaaaagataagataa 143  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  1725241 tatgtataaactatttctataataaaagataaaataa 1725205  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 3887763 - 3887719
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||| ||||||| ||| |||||||||| |||||||||||    
T  3887763 ttatgtataagctatttcaatagcaaaagataaaataaagttaaa 3887719  T

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Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 148
Target Start/End: Complemental strand, 14630093 - 14630057
Alignment:
Q  112 ataaactatttctataacaaaagataagataaagtta 148  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  14630093 ataaactatctctataacaaaagataaaataaagtta 14630057  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 15579538 - 15579574
Alignment:
Q  173 cttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||| |||||||||||||||||| ||||||||    
T  15579538 cttatggacatgtcataagttgtttccacaagctctc 15579574  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 17420142 - 17420182
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagt 146  Q
    ||||||||||||||||| ||||| ||||||||| |||||||    
T  17420142 ttatgtataaactatttttataagaaaagataaaataaagt 17420182  T

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Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 27140417 - 27140461
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataa 143  Q
    ||||||||||||| |||  ||||||||||||||||||||| ||||    
T  27140417 taagtgtttatgtgtaagttatttctataacaaaagataaaataa 27140461  T

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Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 34619509 - 34619465
Alignment:
Q  106 ttatgtataaactatttctataacaaaagataagataaagttaaa 150  Q
    |||||||||| | |||||||||||||||||||| |||| ||||||    
T  34619509 ttatgtataagccatttctataacaaaagataaaataaggttaaa 34619465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 146
Target Start/End: Complemental strand, 44936709 - 44936681
Alignment:
Q  118 tatttctataacaaaagataagataaagt 146  Q
    |||||||||||||||||||||||||||||    
T  44936709 tatttctataacaaaagataagataaagt 44936681  T

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Target: scaffold0590 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 1212 - 1165
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||||||||| |||||||||||||||||||||| |||||||    
T  1212 taagtgcttatgtataagctatttctataacaaaagataaaataaagt 1165  T

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Target: scaffold0275 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 2763 - 2810
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagt 146  Q
    |||||| |||||||||| |||||||||||||||||||||| |||||||    
T  2763 taagtgcttatgtataagctatttctataacaaaagataaaataaagt 2810  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 20110 - 20174
Alignment:
Q  98 ttaagtgtttatgtataaactatttctataacaaaagataagataaagttaaaacagttttcatat 163  Q
    ||||||| ||||||||| |||||||||||||| |||||||| |||||| | |||||||| ||||||    
T  20110 ttaagtgcttatgtatatactatttctataaccaaagataaaataaag-tcaaacagttatcatat 20174  T

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Target: scaffold0654 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 6775 - 6736
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  6775 taagtgcttatgtataaactatttctataacaaaaaataa 6736  T

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Target: scaffold0091 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 5951 - 5990
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  5951 taagtgtttatgtataaacaatttcaataacaaaagataa 5990  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 138
Target Start/End: Complemental strand, 116694 - 116655
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataa 138  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  116694 taagtgcttatgtataaactatttctataacaaaaaataa 116655  T

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Target: scaffold0199 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 6756 - 6804
Alignment:
Q  99 taagtgtttatgtataaactatttctataacaaaagataagataaagtt 147  Q
    ||||||||||| ||||| |||||| ||||||||||| ||| ||||||||    
T  6756 taagtgtttatatataagctatttttataacaaaaggtaaaataaagtt 6804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 12718 - 12682
Alignment:
Q  173 cttatggacttgtcataagttgtttccataagctctc 209  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  12718 cttatggacatgtcataagttgtttccataaggtctc 12682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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