View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5312_high_1 (Length: 909)
Name: NF5312_high_1
Description: NF5312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5312_high_1 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 526; Significance: 0; HSPs: 23)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 526; E-Value: 0
Query Start/End: Original strand, 10 - 643
Target Start/End: Complemental strand, 22879364 - 22878731
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
22879364 |
cagaacctttggctagaccaggtatgagacaagttgtgcagtatttggagagggatatacctttgccagatttgtctttgcctagtttatcttcttctgg |
22879265 |
T |
|
| Q |
110 |
attaacttttgggaaccaaannnnnnnngaggactttcctttgtcttatccttcttctatggacaagaaaatgtcgcatacgtctgtgtctattgctgat |
209 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22879264 |
attaacttttgggaacaaatatttttttgaggactttcctttgtcttatccttcttctatggacaagaaaatgtcgcatacgtctgtgtctcttgctgat |
22879165 |
T |
|
| Q |
210 |
tcacttctctctggtggtcgttagattttggtaaaatggattaaagagagattgttaaatcaaatggaaaatcatatttgagttaatagtgtaatagata |
309 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
22879164 |
tcacttctctctggtggttgttagattttggtaaaatggattaaagagagattgttaaatcaaatgtaaaatcatatttgaattaatagtgtaatagata |
22879065 |
T |
|
| Q |
310 |
cattattctttgatatttatagtgtaacagatacatgaaatcgtgtttatatgtatccaaaatagtaccagttacatttcattatatgccttagaaatgt |
409 |
Q |
| |
|
||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22879064 |
cattattttttgacaattatagtgtaacagatacatgaaatcgtgtttatatgtatccaaaatagtaccagttacatttcattatatgccttagaaatgt |
22878965 |
T |
|
| Q |
410 |
aacaatggataccatagtataagccggcatggcagcataacattttagatacaagcaacactgaactaattttgcacaacattagtttatttttatcatt |
509 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22878964 |
aacaatggataccatagtataagccggcatggcagcataacattttagctacaagcaacactgaactaattttgcacaacattagtttattattatcatt |
22878865 |
T |
|
| Q |
510 |
tatcactagttcaacttcaacctgaactagcagcagaagatggatcaatttacagaatcctccaaatacgagcatcgataacaagacatatatttgcttc |
609 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
22878864 |
tatcactagttcaacttcaacctgaactagcagcagaagatggatcaatttacagaatcctccaaatacgagcatcgataaccagacacatatttgcttc |
22878765 |
T |
|
| Q |
610 |
tgtattttgtagaatatcatcgaaatacagctta |
643 |
Q |
| |
|
|||||||| ||||||||||| |||||||| |||| |
|
|
| T |
22878764 |
tgtattttctagaatatcattgaaatacatctta |
22878731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 425; E-Value: 0
Query Start/End: Original strand, 328 - 875
Target Start/End: Complemental strand, 22896711 - 22896162
Alignment:
| Q |
328 |
atagtgtaacagatacatgaaatcgtgtttatatgtatccaaaatagtaccagttacatttcattatatgccttagaaatgtaa---caatggataccat |
424 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
22896711 |
atagtgtaacaaatacatgaaatcgtgtttttatgtatccaaaatagtaccagttacatgtcattatatgccttagaaatgttattacaatggataccat |
22896612 |
T |
|
| Q |
425 |
agtataagccggcatggcagcataacattttagatacaagcaacactgaactaattttgcacaacattagtttatttttatcatttatcactagttcaac |
524 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22896611 |
agtataagccagcatggcagcataacattttagctacaagcaacactgaactaattttgcacaacattagtttatttttatcatttatcactagttcaac |
22896512 |
T |
|
| Q |
525 |
ttcaacctgaactagcagcagaagatggatcaatttacagaatcctccaaatacgagcatcgataacaagacatatatttgcttctgtattttgtagaat |
624 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22896511 |
ttcaacctgaactagcagcagaagatggctcaatttatagaatcctccaaatacgagcatcgataacaagacatatatttgcttctgtattttctagaat |
22896412 |
T |
|
| Q |
625 |
atcatcgaaatacagcttagatatccacctgtaatattgagcaactaatcaatgttaatatacagggcttggcaggattaagttatcagcatgcgtagaa |
724 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22896411 |
atcatcgaaatacagcttagatatccacctgtaatattgagcaactaatcaatgttaatatacagggcttggcaggattaagttatcagcatgcgtagaa |
22896312 |
T |
|
| Q |
725 |
tgagccttaaatattaaaattgaacaacacagcataattataatcactgtcatagacaacgtcctacgttaccgaaaattgatcccaggacctccaactc |
824 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || | || ||||| ||| |||| | | ||||||||||| |
|
|
| T |
22896311 |
tgagccttaaatattaaaattgaacaacacatcataattataatcactgtcatggacaatgt-cgacattaccaaaatttgaacagacgacctccaactt |
22896213 |
T |
|
| Q |
825 |
cttaacctttagttgaaaccagttgaggtactcaaccctcgaccaacaaat |
875 |
Q |
| |
|
||||||| |||| | |||||| | ||||||||||||||||||||||||||| |
|
|
| T |
22896212 |
cttaacccttagctcaaaccaatcgaggtactcaaccctcgaccaacaaat |
22896162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 642 - 896
Target Start/End: Complemental strand, 22878652 - 22878398
Alignment:
| Q |
642 |
tagatatccacctgtaatattgagcaactaatcaatgttaatatacagggcttggcaggattaagttatcagcatgcgtagaatgagccttaaatattaa |
741 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22878652 |
tagatatccacctataatattgagcaactaatcaatgttaatatacagggcttggcaggattaagttatcagcatgcgtagaatgagccttaaatattaa |
22878553 |
T |
|
| Q |
742 |
aattgaacaacacagcataattataatcactgtcatagacaacgtcctacgttaccgaaaattgatcccaggacctccaactccttaacctttagttgaa |
841 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22878552 |
aattgaacaacacatcataattataatcactgtcatagacaacgtcctacgttaccgaaaattgatcccaggacctccaactccttaacccttagttgaa |
22878453 |
T |
|
| Q |
842 |
accagttgaggtactcaaccctcgaccaacaaatacagtgatgaaatttaaattt |
896 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22878452 |
accagttgaggtactcaaccctcgaccaacaaatacagtgatgaaatttaaattt |
22878398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 10 - 311
Target Start/End: Complemental strand, 22892680 - 22892379
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22892680 |
cagaacctttggctagaccatgtatgagacaagttgtgcagtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttcttctgg |
22892581 |
T |
|
| Q |
110 |
attaacttttgggaaccaaannnnnnnngaggactttcctttgtcttatccttcttctatggacaagaaaatgtcgcatacgtctgtgtctattgctgat |
209 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| ||| | |||||| || || |||||||||||||| || |
|
|
| T |
22892580 |
attaacttttgggtaccaagaattttttgaggactttcctttgtcttatccttcctctatgggcaacacaatgtcacagacttctgtgtctattgccgac |
22892481 |
T |
|
| Q |
210 |
tcacttctctctggtggtcgttagattttggtaaaatggattaaagagagattgttaaatcaaatggaaaatcatatttgagttaatagtgtaatagata |
309 |
Q |
| |
|
||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22892480 |
tcaattctctctggttgtcgttagattttggtaaaatggattaaggagagtttgttaaatcaaatgtaaaatcatatttgagttaatagtgtaatagata |
22892381 |
T |
|
| Q |
310 |
ca |
311 |
Q |
| |
|
|| |
|
|
| T |
22892380 |
ca |
22892379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 10 - 312
Target Start/End: Complemental strand, 22896996 - 22896694
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||| | ||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
22896996 |
cagaacctttggctagaccaggtatgagacaagttgtacagtatttggaaagggatatacctttaccagatttgtctttgcttagtttatcttcttctgg |
22896897 |
T |
|
| Q |
110 |
attaacttttgggaaccaaannnnnnnngaggactttcctttgtcttatccttcttctatggacaagaaaatgtcgcatacgtctgtgtctattgctgat |
209 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| | |||||| || || |||||||||||||||||| |
|
|
| T |
22896896 |
tttaacttttgggtaccaagaattttttgaggactttcctttgtcttatccttcttctatgggcaacacaatgtcacacacctctgtgtctattgctgat |
22896797 |
T |
|
| Q |
210 |
tcacttctctctggtggtcgttagattttggtaaaatggattaaagagagattgttaaatcaaatggaaaatcatatttgagttaatagtgtaatagata |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||| |
|
|
| T |
22896796 |
tcacttctctctggtggtcgttagattttggtaaaatggattaaggagagtttgttaaatcaaatgtaaaatcatatttgagttaatagtgtaacaaata |
22896697 |
T |
|
| Q |
310 |
cat |
312 |
Q |
| |
|
||| |
|
|
| T |
22896696 |
cat |
22896694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 10 - 309
Target Start/End: Complemental strand, 22813754 - 22813458
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||| |
|
|
| T |
22813754 |
cagaacctttggctagaccaggtatgagacaagttgtgcagtatttggagcgggatatacctttgccagatttgccttcgcttagtttatcttcttctgg |
22813655 |
T |
|
| Q |
110 |
attaacttttgggaaccaaannnnnnnngaggactttcctttgtcttatccttcttctatggacaagaaaatgtcgcatacgtctgtgtctattgctgat |
209 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||| ||||||||||| |||||||||| |||||| ||||| ||||| |||||| ||||| |
|
|
| T |
22813654 |
attaacttttgggtaccaagaatattttgaggactttcctttgtcgtatccttcttccatggacaagacaatgtcacatacttctgtttctatttctgat |
22813555 |
T |
|
| Q |
210 |
tcacttctctctggtggtcgttagattttggtaaaatggattaaagagagattgttaaatcaaatggaaaatcatatttgagttaatagtgtaatagata |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22813554 |
tcacttctctctggtggtcgttagattttggt--tgtggattaaaaaga-tttgttaaatcaaatggaaaatcatatttgagttaatagtgtaatagata |
22813458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 757 - 896
Target Start/End: Complemental strand, 22812923 - 22812785
Alignment:
| Q |
757 |
cataattataatcactgtcatagacaacgtcctacgttaccgaaaattgatcccaggacctccaactccttaacctttagttgaaaccagttgaggtact |
856 |
Q |
| |
|
||||||||||||||||||||| ||||||||| || |||| | |||||||| || ||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
22812923 |
cataattataatcactgtcatggacaacgtc-taagttagcaaaaattgaaccgaggacctccaactccttaacccttagctgaaaccagttgaggtact |
22812825 |
T |
|
| Q |
857 |
caaccctcgaccaacaaatacagtgatgaaatttaaattt |
896 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22812824 |
caaccctcgaccaacaaatacagtgataaaatttaaattt |
22812785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 22808347 - 22808229
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||| ||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
22808347 |
cagagcctctggttagaccaagtatgagacaagttgtgcagtatttggagagggatatagctttgccagatttgtcttcgcttagtttatcttcttctgg |
22808248 |
T |
|
| Q |
110 |
attaacttttgggaaccaa |
128 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
22808247 |
tttaacttttgggtaccaa |
22808229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 22804063 - 22803945
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| |||||||||||||||| | ||| |
|
|
| T |
22804063 |
cagagcctttggctagaccaagtatgagacaagttgtgcagtatttggagagggatttacctttaccagatttgtcattgcttagtttatcttcctatgg |
22803964 |
T |
|
| Q |
110 |
attaacttttgggaaccaa |
128 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
22803963 |
attaacttttgggcaccaa |
22803945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 22870561 - 22870443
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||| |||||||||||||||| | ||| |
|
|
| T |
22870561 |
cagagcctttggctagaccaagtatgagacaagttgtgcagtatttggagagggatatacctttaccagctttgtcattgcttagtttatcttcctatgg |
22870462 |
T |
|
| Q |
110 |
attaacttttgggaaccaa |
128 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
22870461 |
attaacttttgggcaccaa |
22870443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 22888025 - 22887907
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||| |||| |||||||||||||| |||||| |
|
|
| T |
22888025 |
cagagcctttggctagaccaagtatgagacaagttgtacagtatttggagagggatacacctttgccagatttttcttcgcttagtttatcttcttctgg |
22887926 |
T |
|
| Q |
110 |
attaacttttgggaaccaa |
128 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
22887925 |
tttaacttttgggtaccaa |
22887907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 22829758 - 22829640
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||| || |||||||||||||| |||||| |
|
|
| T |
22829758 |
cagaacctttggctagaccaggtatgagacaagttgtgcagtatttggagagggatatacctttgccatatttgttttcgcttagtttatcttcttctgg |
22829659 |
T |
|
| Q |
110 |
attaacttttgggaaccaa |
128 |
Q |
| |
|
||| ||||||| ||||| |
|
|
| T |
22829658 |
tttattttttgggtaccaa |
22829640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 22874655 - 22874537
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||| ||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||| |
|
|
| T |
22874655 |
cagagcctttggctagaccaagcatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttttcttcgcttagtttatcttcttttgg |
22874556 |
T |
|
| Q |
110 |
attaacttttgggaaccaa |
128 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
22874555 |
tttaacttttgggtaccaa |
22874537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 22838779 - 22838661
Alignment:
| Q |
10 |
cagaacctgtggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
|||| ||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||| || ||||||||||||| ||||||||||||| || ||| |
|
|
| T |
22838779 |
cagagcctttggctagaccaagtatgaggcaagttgtgcagtatttggagacggatataccctttccagatttgtcttcgcttagtttatctacttttgg |
22838680 |
T |
|
| Q |
110 |
attaacttttgggaaccaa |
128 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
22838679 |
tttaacttttgggtaccaa |
22838661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 540 - 643
Target Start/End: Complemental strand, 22813178 - 22813075
Alignment:
| Q |
540 |
cagcagaagatggatcaatttacagaatcctccaaatacgagcatcgataacaagacatatatttgcttctgtattttgtagaatatcatcgaaatacag |
639 |
Q |
| |
|
||||||||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||| | |||||| ||||||| |
|
|
| T |
22813178 |
cagcagaagatggttcgatttacagaatcctgcaaatacgagcatcgataactggacatatatttgcttctgtattttctaggaaatcatctaaatacat |
22813079 |
T |
|
| Q |
640 |
ctta |
643 |
Q |
| |
|
|||| |
|
|
| T |
22813078 |
ctta |
22813075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 642 - 712
Target Start/End: Complemental strand, 22812997 - 22812927
Alignment:
| Q |
642 |
tagatatccacctgtaatattgagcaactaatcaatg-ttaatatacagggcttggcaggattaagttatca |
712 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
22812997 |
tagacatccacctataatattgagcaactaatcaatgtttaatatacagggcttggcagga-taagttatca |
22812927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 539 - 630
Target Start/End: Complemental strand, 22800133 - 22800042
Alignment:
| Q |
539 |
gcagcagaagatggatcaatttacagaatcctccaaatacgagcatcgataacaagacatatatttgcttctgtattttgtagaatatcatc |
630 |
Q |
| |
|
||||||||||||||||||||| |||||| ||| ||||||||||||| | ||| |||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
22800133 |
gcagcagaagatggatcaattcacagaagcctggaaatacgagcatcaacaaccggacatatacttgcttctgtatttcctagaaaatcatc |
22800042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 22808098 - 22808015
Alignment:
| Q |
229 |
gttagattttggtaaaatggattaaagagagattgttaaatcaaatggaaaatcatatttgagttaatagtgtaatagatacat |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||| |||||| |||||| ||||| |
|
|
| T |
22808098 |
gttagattttggtaaaatggattaaagagagtttgttatctgaaaagtgaaatcatgtttgagaaaatagtttaatagttacat |
22808015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 22912377 - 22912331
Alignment:
| Q |
19 |
tggctagaccaagtatgagacaagttgtgctgtatttggagagggat |
65 |
Q |
| |
|
|||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
22912377 |
tggctagaccaagtatgagacaagttttgaggtatttggagagggat |
22912331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 22838530 - 22838493
Alignment:
| Q |
229 |
gttagattttggtaaaatggattaaagagagattgtta |
266 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22838530 |
gttagattttggtaaaatggattaaagagagtttgtta |
22838493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 22838649 - 22838588
Alignment:
| Q |
170 |
ggacaagaaaatgtcgcatacgtctgtgtctattgctgattcacttctctctggtggtcgtt |
231 |
Q |
| |
|
|||||||| |||| || |||| ||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
22838649 |
ggacaagacaatgccgtatacttctgtgtctattgctgaatccgttctctctggtggtcgtt |
22838588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 813 - 862
Target Start/End: Original strand, 44184263 - 44184312
Alignment:
| Q |
813 |
gacctccaactccttaacctttagttgaaaccagttgaggtactcaaccc |
862 |
Q |
| |
|
|||||||||||| |||||| |||||| |||||||||||| |||||||||| |
|
|
| T |
44184263 |
gacctccaactcattaacccttagttcaaaccagttgagttactcaaccc |
44184312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 22829628 - 22829567
Alignment:
| Q |
170 |
ggacaagaaaatgtcgcatacgtctgtgtctattgctgattcacttctctctggtggtcgtt |
231 |
Q |
| |
|
|||||||| |||| || |||| ||||| ||||||||||| || |||||||||||||||||| |
|
|
| T |
22829628 |
ggacaagacaatgccgtatacttctgtatctattgctgagtctgttctctctggtggtcgtt |
22829567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 21151996 - 21152086
Alignment:
| Q |
19 |
tggctagaccaagtatgagacaagttgtgctgtatttggagagggatatacctttgccagatttgtctttgcttagtttatcttattctgg |
109 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
21151996 |
tggctagaccaagtatgaggcaagttgtgcagtatttggagagggatatacctttgccagatttgtcttcacttagtttatcttcttctgg |
21152086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 538 - 630
Target Start/End: Original strand, 15864898 - 15864990
Alignment:
| Q |
538 |
agcagcagaagatggatcaatttacagaatcctccaaatacgagcatcgataacaagacatatatttgcttctgtattttgtagaatatcatc |
630 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||| |||||||||||||| | ||| || |||| |||||||||||||| ||||| |||||| |
|
|
| T |
15864898 |
agcagcagaagatggatcaattcacagaagcctgcaaatacgagcatcaacaaccgtacctatacttgcttctgtatttcctagaaaatcatc |
15864990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 803 - 861
Target Start/End: Complemental strand, 2097140 - 2097082
Alignment:
| Q |
803 |
ttgatcccaggacctccaactccttaacctttagttgaaaccagttgaggtactcaacc |
861 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||| | |||| ||||||| ||| ||||| |
|
|
| T |
2097140 |
ttgaacccaggacctccaactccttaacccttagctcaaactagttgagctacccaacc |
2097082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 813 - 851
Target Start/End: Complemental strand, 44675628 - 44675590
Alignment:
| Q |
813 |
gacctccaactccttaacctttagttgaaaccagttgag |
851 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
44675628 |
gacctccaactccttaacctttagctcaaaccagttgag |
44675590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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