View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5312_high_65 (Length: 239)
Name: NF5312_high_65
Description: NF5312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5312_high_65 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28690943 - 28691165
Alignment:
| Q |
1 |
tatatatcatctaaggattgatacaatttttattagtactttcacttaatgtgatttattgatgaatactttgtttcattgaccagctaaggattcacac |
100 |
Q |
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| T |
28690943 |
tatatatcatctaaggattgatacaatttttattagtactttcacttaatgtgatttattgatgaatactttgtttcattgaccagctaaggattcacac |
28691042 |
T |
|
| Q |
101 |
acattcctcatcaattggtttaaaagatttcctcaatttaaatcacatgatttctacattgctggtgaaagctatgcaggtatatttaacttgtaaaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28691043 |
acattcctcatcaattggtttaaaagatttcctcaattcaaatcacatgatttctacattgctggtgaaagctatgcaggtatatttaacttgtaaaata |
28691142 |
T |
|
| Q |
201 |
attttaatagatactaagttcct |
223 |
Q |
| |
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||||||||| ||||||||||||| |
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| T |
28691143 |
attttaataaatactaagttcct |
28691165 |
T |
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