View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5312_low_17 (Length: 398)

Name: NF5312_low_17
Description: NF5312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5312_low_17
NF5312_low_17
[»] chr1 (55 HSPs)
chr1 (16-382)||(16237183-16237549)
chr1 (143-382)||(10450065-10450304)
chr1 (71-382)||(19003600-19003899)
chr1 (182-392)||(37032174-37032384)
chr1 (47-282)||(35069800-35070034)
chr1 (141-382)||(12718776-12719010)
chr1 (212-380)||(19892821-19892986)
chr1 (254-375)||(48024385-48024505)
chr1 (118-238)||(23058454-23058574)
chr1 (278-382)||(35077330-35077433)
chr1 (99-234)||(9982852-9982987)
chr1 (143-224)||(29936418-29936499)
chr1 (268-389)||(17516262-17516385)
chr1 (119-238)||(12494998-12495117)
chr1 (110-224)||(36187193-36187307)
chr1 (110-219)||(34085242-34085351)
chr1 (119-224)||(51421860-51421965)
chr1 (99-219)||(17134954-17135074)
chr1 (119-218)||(5181047-5181146)
chr1 (161-224)||(41476976-41477039)
chr1 (119-224)||(23490753-23490858)
chr1 (141-222)||(39219262-39219343)
chr1 (141-222)||(48125687-48125768)
chr1 (276-348)||(38733892-38733964)
chr1 (110-224)||(16408944-16409058)
chr1 (146-224)||(28297936-28298014)
chr1 (125-223)||(34673270-34673368)
chr1 (141-215)||(38686673-38686747)
chr1 (110-224)||(49250746-49250860)
chr1 (119-216)||(19572494-19572591)
chr1 (119-224)||(24236743-24236848)
chr1 (141-238)||(29871289-29871386)
chr1 (119-224)||(44615457-44615562)
chr1 (119-224)||(44793007-44793112)
chr1 (114-194)||(33293508-33293588)
chr1 (145-216)||(3627993-3628064)
chr1 (276-351)||(34673398-34673473)
chr1 (119-205)||(36617381-36617468)
chr1 (276-351)||(44615592-44615667)
chr1 (276-351)||(44632252-44632327)
chr1 (276-351)||(44792902-44792977)
chr1 (141-236)||(47644864-47644958)
chr1 (143-218)||(50426667-50426742)
chr1 (110-200)||(24710873-24710963)
chr1 (119-236)||(16903513-16903630)
chr1 (276-356)||(17092075-17092156)
chr1 (134-219)||(18354077-18354162)
chr1 (291-328)||(23058254-23058291)
chr1 (257-298)||(23058322-23058363)
chr1 (119-180)||(23968625-23968686)
chr1 (141-206)||(35936833-35936898)
chr1 (143-224)||(45866191-45866272)
chr1 (276-356)||(50426771-50426852)
chr1 (148-200)||(5293416-5293468)
chr1 (137-169)||(38841623-38841655)
[»] chr2 (35 HSPs)
chr2 (118-382)||(38342500-38342763)
chr2 (135-382)||(3547010-3547257)
chr2 (141-382)||(43371400-43371638)
chr2 (143-382)||(14331371-14331610)
chr2 (45-382)||(24051532-24051861)
chr2 (52-377)||(30978774-30979098)
chr2 (136-374)||(6164472-6164715)
chr2 (135-382)||(4427768-4428015)
chr2 (71-381)||(26755597-26755895)
chr2 (141-392)||(18485479-18485733)
chr2 (190-382)||(42576456-42576648)
chr2 (141-380)||(44057720-44057968)
chr2 (99-224)||(7314610-7314735)
chr2 (110-238)||(44746082-44746210)
chr2 (110-224)||(24414105-24414219)
chr2 (110-224)||(30846948-30847062)
chr2 (145-238)||(25210365-25210458)
chr2 (136-236)||(15546734-15546834)
chr2 (119-238)||(35248367-35248486)
chr2 (135-224)||(22900796-22900885)
chr2 (143-224)||(37999485-37999566)
chr2 (110-218)||(37106700-37106808)
chr2 (276-351)||(31942302-31942377)
chr2 (119-178)||(10212454-10212513)
chr2 (171-222)||(11959019-11959070)
chr2 (146-224)||(13705370-13705448)
chr2 (99-169)||(19104799-19104869)
chr2 (78-164)||(31942126-31942212)
chr2 (82-224)||(36128051-36128193)
chr2 (146-224)||(45256825-45256903)
chr2 (143-224)||(9632388-9632469)
chr2 (100-169)||(18106082-18106151)
chr2 (276-351)||(6028005-6028081)
chr2 (155-223)||(30696927-30696995)
chr2 (141-237)||(35510447-35510543)
[»] chr4 (59 HSPs)
chr4 (71-379)||(45065101-45065409)
chr4 (141-375)||(29527669-29527902)
chr4 (57-375)||(30672819-30673135)
chr4 (141-382)||(21544428-21544669)
chr4 (57-344)||(41914917-41915193)
chr4 (147-377)||(10574430-10574666)
chr4 (66-343)||(31415861-31416137)
chr4 (156-389)||(16216673-16216906)
chr4 (57-382)||(15733447-15733764)
chr4 (141-392)||(31782454-31782703)
chr4 (188-382)||(568266-568460)
chr4 (153-382)||(30266347-30266577)
chr4 (153-382)||(30285611-30285841)
chr4 (115-382)||(47103582-47103854)
chr4 (156-375)||(18423446-18423665)
chr4 (141-360)||(11172840-11173063)
chr4 (177-377)||(24637048-24637246)
chr4 (76-315)||(1866489-1866727)
chr4 (113-293)||(14605902-14606081)
chr4 (302-382)||(1866753-1866833)
chr4 (98-219)||(10302096-10302217)
chr4 (99-224)||(6481998-6482123)
chr4 (110-223)||(11028081-11028194)
chr4 (119-224)||(31752463-31752568)
chr4 (99-224)||(44317542-44317667)
chr4 (135-234)||(1724309-1724408)
chr4 (110-224)||(6382246-6382360)
chr4 (188-265)||(15132183-15132260)
chr4 (119-236)||(19883039-19883156)
chr4 (119-194)||(7334180-7334254)
chr4 (110-224)||(7608977-7609091)
chr4 (142-224)||(50684474-50684556)
chr4 (143-224)||(5902621-5902702)
chr4 (141-222)||(25941147-25941228)
chr4 (99-224)||(26564838-26564963)
chr4 (319-375)||(14606091-14606147)
chr4 (146-238)||(42907879-42907971)
chr4 (85-200)||(39086188-39086303)
chr4 (141-223)||(12825466-12825548)
chr4 (110-224)||(15987236-15987350)
chr4 (146-224)||(47550363-47550441)
chr4 (141-222)||(16575121-16575202)
chr4 (135-224)||(48459488-48459577)
chr4 (119-224)||(55826606-55826711)
chr4 (276-351)||(425726-425801)
chr4 (276-351)||(6482153-6482228)
chr4 (276-359)||(28695259-28695342)
chr4 (110-197)||(43309517-43309604)
chr4 (144-222)||(32596192-32596270)
chr4 (119-216)||(4741199-4741296)
chr4 (119-180)||(19548920-19548981)
chr4 (147-224)||(32585496-32585573)
chr4 (119-224)||(39375285-39375390)
chr4 (110-169)||(12505514-12505574)
chr4 (141-169)||(24637243-24637271)
chr4 (135-215)||(29035531-29035611)
chr4 (135-215)||(29047664-29047744)
chr4 (146-222)||(33916166-33916242)
chr4 (276-351)||(47239502-47239578)
[»] chr7 (60 HSPs)
chr7 (135-378)||(32546044-32546287)
chr7 (47-377)||(31425862-31426192)
chr7 (111-378)||(37103101-37103368)
chr7 (115-382)||(18683822-18684089)
chr7 (68-377)||(30839064-30839374)
chr7 (45-382)||(42907947-42908275)
chr7 (141-382)||(28309341-28309581)
chr7 (57-380)||(27062993-27063311)
chr7 (115-382)||(29014930-29015203)
chr7 (76-382)||(29157197-29157505)
chr7 (145-379)||(21750637-21750867)
chr7 (115-382)||(43218131-43218398)
chr7 (115-276)||(22973342-22973503)
chr7 (249-389)||(27062376-27062516)
chr7 (114-281)||(44845112-44845278)
chr7 (206-389)||(2471836-2472019)
chr7 (268-382)||(22962412-22962526)
chr7 (85-238)||(27063326-27063479)
chr7 (284-389)||(44845321-44845426)
chr7 (99-224)||(38139754-38139879)
chr7 (119-222)||(45380115-45380218)
chr7 (110-224)||(3157089-3157203)
chr7 (78-224)||(7780014-7780160)
chr7 (119-233)||(27896457-27896571)
chr7 (119-224)||(12980383-12980488)
chr7 (71-219)||(5565241-5565389)
chr7 (141-224)||(18825876-18825959)
chr7 (143-238)||(27850332-27850427)
chr7 (110-224)||(16866175-16866289)
chr7 (141-238)||(3920530-3920627)
chr7 (70-215)||(8906522-8906667)
chr7 (110-219)||(10072477-10072586)
chr7 (275-351)||(27850441-27850517)
chr7 (110-210)||(39455988-39456088)
chr7 (110-217)||(45885738-45885845)
chr7 (110-224)||(17885471-17885585)
chr7 (110-224)||(35074476-35074590)
chr7 (78-224)||(38152893-38153038)
chr7 (143-216)||(41103670-41103743)
chr7 (141-221)||(5377094-5377174)
chr7 (99-163)||(44985880-44985944)
chr7 (141-224)||(10995838-10995921)
chr7 (276-351)||(12980278-12980353)
chr7 (141-236)||(23475267-23475362)
chr7 (99-224)||(17851860-17851983)
chr7 (78-200)||(24753194-24753315)
chr7 (125-234)||(2630562-2630670)
chr7 (143-216)||(3226952-3227025)
chr7 (143-224)||(18125234-18125315)
chr7 (143-224)||(21702665-21702746)
chr7 (141-222)||(26622959-26623040)
chr7 (135-216)||(33841092-33841173)
chr7 (279-351)||(37579164-37579236)
chr7 (276-351)||(3920440-3920515)
chr7 (141-236)||(23533608-23533702)
chr7 (276-343)||(26004588-26004655)
chr7 (143-221)||(25979923-25980001)
chr7 (147-180)||(10990871-10990904)
chr7 (276-345)||(26622859-26622928)
chr7 (276-356)||(38139909-38139990)
[»] scaffold0008 (2 HSPs)
scaffold0008 (77-377)||(67597-67897)
scaffold0008 (77-377)||(75440-75740)
[»] chr8 (37 HSPs)
chr8 (46-382)||(15068497-15068832)
chr8 (45-378)||(10297304-10297639)
chr8 (141-389)||(40789425-40789673)
chr8 (193-375)||(8030990-8031170)
chr8 (118-382)||(2183587-2183873)
chr8 (213-377)||(4594213-4594375)
chr8 (197-306)||(2189907-2190016)
chr8 (70-238)||(15173813-15173981)
chr8 (295-377)||(15174007-15174089)
chr8 (284-382)||(2190017-2190115)
chr8 (119-222)||(14687402-14687505)
chr8 (110-234)||(20399583-20399707)
chr8 (141-224)||(17469256-17469339)
chr8 (133-238)||(9476008-9476114)
chr8 (110-224)||(32303062-32303176)
chr8 (101-236)||(30481385-30481520)
chr8 (143-221)||(1063511-1063589)
chr8 (110-216)||(27932422-27932528)
chr8 (110-224)||(29108795-29108909)
chr8 (139-224)||(17084109-17084194)
chr8 (125-205)||(32392374-32392454)
chr8 (141-263)||(14507231-14507350)
chr8 (125-216)||(27056543-27056634)
chr8 (75-222)||(27777136-27777283)
chr8 (119-222)||(28345494-28345597)
chr8 (110-224)||(24927950-24928064)
chr8 (82-224)||(39445521-39445663)
chr8 (99-200)||(6388478-6388579)
chr8 (146-219)||(40248380-40248453)
chr8 (110-186)||(5858625-5858701)
chr8 (333-377)||(14507579-14507623)
chr8 (141-216)||(9642355-9642430)
chr8 (141-224)||(37960966-37961049)
chr8 (70-133)||(41188665-41188728)
chr8 (142-221)||(43113631-43113710)
chr8 (141-222)||(8545353-8545434)
chr8 (276-316)||(35140414-35140454)
[»] chr6 (37 HSPs)
chr6 (46-375)||(18908744-18909072)
chr6 (45-374)||(29199805-29200122)
chr6 (85-374)||(9458516-9458803)
chr6 (249-389)||(9458156-9458296)
chr6 (71-313)||(20610916-20611158)
chr6 (52-273)||(17546818-17547038)
chr6 (115-238)||(9458845-9458968)
chr6 (135-221)||(28079694-28079780)
chr6 (110-224)||(32853845-32853959)
chr6 (119-224)||(27738773-27738878)
chr6 (143-224)||(32053089-32053170)
chr6 (114-221)||(20349068-20349175)
chr6 (78-224)||(2367327-2367473)
chr6 (110-224)||(5863356-5863470)
chr6 (119-223)||(10142500-10142604)
chr6 (124-224)||(24225699-24225799)
chr6 (141-224)||(14410859-14410942)
chr6 (81-224)||(27534685-27534828)
chr6 (110-224)||(12141386-12141500)
chr6 (110-224)||(15498325-15498439)
chr6 (125-238)||(11762432-11762545)
chr6 (110-238)||(29341243-29341371)
chr6 (110-224)||(3483896-3484010)
chr6 (99-224)||(256454-256579)
chr6 (143-216)||(32532549-32532622)
chr6 (128-217)||(32959868-32959956)
chr6 (124-224)||(12309573-12309673)
chr6 (99-234)||(30816251-30816384)
chr6 (276-355)||(11762338-11762417)
chr6 (110-233)||(12678067-12678190)
chr6 (276-351)||(12678210-12678285)
chr6 (119-238)||(13769059-13769178)
chr6 (276-351)||(14032453-14032528)
chr6 (141-216)||(14506095-14506170)
chr6 (137-194)||(9402619-9402676)
chr6 (76-185)||(21875588-21875697)
chr6 (141-238)||(24602860-24602957)
[»] chr5 (37 HSPs)
chr5 (47-377)||(2681065-2681394)
chr5 (76-392)||(23044931-23045246)
chr5 (76-382)||(12915318-12915621)
chr5 (146-382)||(20634024-20634261)
chr5 (146-382)||(20650138-20650375)
chr5 (68-375)||(43523611-43523905)
chr5 (147-368)||(34259118-34259333)
chr5 (154-382)||(12250816-12251041)
chr5 (177-375)||(18116547-18116743)
chr5 (141-252)||(12712562-12712673)
chr5 (141-252)||(12773826-12773937)
chr5 (249-382)||(10834054-10834187)
chr5 (45-221)||(28568930-28569106)
chr5 (141-238)||(32574943-32575040)
chr5 (318-382)||(12712686-12712750)
chr5 (110-224)||(4583120-4583234)
chr5 (110-224)||(4920827-4920941)
chr5 (141-234)||(6810149-6810242)
chr5 (322-382)||(12773954-12774014)
chr5 (137-218)||(10822527-10822608)
chr5 (99-206)||(33727964-33728071)
chr5 (119-224)||(5908671-5908776)
chr5 (119-215)||(16311276-16311372)
chr5 (110-221)||(20973470-20973581)
chr5 (110-224)||(17853267-17853380)
chr5 (141-235)||(38006474-38006568)
chr5 (153-238)||(17153156-17153241)
chr5 (123-236)||(27900388-27900501)
chr5 (148-224)||(22694913-22694989)
chr5 (85-180)||(10834541-10834634)
chr5 (285-351)||(27088477-27088543)
chr5 (147-209)||(27302746-27302808)
chr5 (110-224)||(38972923-38973037)
chr5 (143-224)||(15890208-15890288)
chr5 (143-224)||(30996597-30996678)
chr5 (137-238)||(35193990-35194091)
chr5 (119-224)||(40517807-40517912)
[»] scaffold0184 (1 HSPs)
scaffold0184 (113-377)||(2817-3081)
[»] scaffold0015 (1 HSPs)
scaffold0015 (135-378)||(55896-56138)
[»] chr3 (35 HSPs)
chr3 (71-382)||(1772333-1772644)
chr3 (192-382)||(2487638-2487828)
chr3 (153-382)||(40796153-40796382)
chr3 (254-382)||(23330007-23330135)
chr3 (116-298)||(35687470-35687652)
chr3 (135-224)||(30616279-30616368)
chr3 (119-221)||(4557287-4557389)
chr3 (113-197)||(2490333-2490417)
chr3 (135-222)||(4016042-4016129)
chr3 (110-224)||(39655246-39655360)
chr3 (110-224)||(49580065-49580179)
chr3 (76-233)||(10043221-10043378)
chr3 (119-224)||(34025955-34026060)
chr3 (143-224)||(44172627-44172708)
chr3 (143-224)||(44179327-44179408)
chr3 (99-224)||(48390779-48390904)
chr3 (276-378)||(14208270-14208372)
chr3 (99-169)||(20087053-20087123)
chr3 (110-224)||(29284337-29284451)
chr3 (78-224)||(52198156-52198302)
chr3 (119-224)||(19111735-19111840)
chr3 (99-224)||(34154415-34154540)
chr3 (99-224)||(39728672-39728797)
chr3 (276-345)||(42758277-42758346)
chr3 (119-224)||(44639275-44639380)
chr3 (143-222)||(23546948-23547027)
chr3 (110-224)||(7469751-7469865)
chr3 (119-221)||(34119660-34119762)
chr3 (110-224)||(44252748-44252862)
chr3 (110-224)||(44953408-44953522)
chr3 (276-345)||(30682724-30682793)
chr3 (276-351)||(53631801-53631876)
chr3 (110-224)||(3385829-3385943)
chr3 (110-224)||(42243388-42243502)
chr3 (99-224)||(42758375-42758500)
[»] scaffold0013 (2 HSPs)
scaffold0013 (47-377)||(128030-128361)
scaffold0013 (87-377)||(105419-105709)
[»] scaffold0059 (1 HSPs)
scaffold0059 (71-377)||(69943-70250)
[»] scaffold0182 (2 HSPs)
scaffold0182 (152-379)||(16814-17040)
scaffold0182 (79-127)||(17052-17100)
[»] scaffold0005 (2 HSPs)
scaffold0005 (113-293)||(211297-211476)
scaffold0005 (319-375)||(211231-211287)
[»] scaffold0036 (1 HSPs)
scaffold0036 (124-222)||(33396-33494)
[»] scaffold0189 (1 HSPs)
scaffold0189 (276-356)||(4148-4229)
[»] scaffold0157 (1 HSPs)
scaffold0157 (110-169)||(14903-14963)


Alignment Details
Target: chr1 (Bit Score: 259; Significance: 1e-144; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 16 - 382
Target Start/End: Original strand, 16237183 - 16237549
Alignment:
Q  16 gtaactgcgaaattcaaatacactacttcagtaggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctc 115  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||  |||||||||||||||||||||||| ||||||||||| |||||||    
T  16237183 gtaattgcgaaattcaaatacactacttaagtaggtatggtaacaaaactcatgctcataggtacccgtccaaaccaaccctgatttgatgggctttctc 16237282  T
Q  116 cgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacata 215  Q
    | |||||| || |||| |||||| |||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| |||||||||| ||||    
T  16237283 caatttgactgagtttggatatgaatttgggttttccccgatttcaaaatacgggtaagggacgggtaacgaggatatatgtactaaccccgaacccata 16237382  T
Q  216 cccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatat 315  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  16237383 cccaaaccctacccgaatgtagaaatgtcatatttttgtttttgttgagggggttgataatgatatgtcatgttatttggtttgataattgtcatgatat 16237482  T
Q  316 aggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||| |||||||||||| ||||||    
T  16237483 aggaattttcattgatagttaaaggagcaatcgaattattcggtatgaaaatgttaaaataaacgca 16237549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 143 - 382
Target Start/End: Original strand, 10450065 - 10450304
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatg 242  Q
    |||| ||||||| |||| ||||||||| |||||| ||| ||||  ||||||||||||| ||||||||| ||||||||||||||||||||||||||| | |    
T  10450065 tgggctttccccaattttaaaatacgggtacggggcgggtaacagggatatatgtacccaccccgaactcatacccaaaccctacccgaatgtagaaagg 10450164  T
Q  243 tcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggag 342  Q
    ||||  ||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||    
T  10450165 tcatgtttttgtttttgttgagggggtttataatgatatgtcatgttatttggtttaataattgtcatgatataagaacttttattgatagttaaaggag 10450264  T
Q  343 caaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
     |||| ||||||||| || |||||||||||||||||||||    
T  10450265 aaaccgaattattcgataaggaaatgttaaaatgaacgca 10450304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 71 - 382
Target Start/End: Original strand, 19003600 - 19003899
Alignment:
Q  71 ccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgga 170  Q
    |||| |||||||| ||||| |||||  ||||||| ||  |||| ||||||||| | ||||| | ||||| || ||||||||||||||| ||||||||||     
T  19003600 ccatgggtacccgcccaaagcaaccccgatttgacgggttttccccgatttgactaggtttgggtatgggttcgggttttccccgattacaaaatacggg 19003699  T
Q  171 tacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggtt 270  Q
    || ||||||||||||| ||||||||||| | |||||            |||||||||||||||||||| | |||||| ||||||||||||| ||| ||||    
T  19003700 tatgggacggataacggggatatatgtatccacccc------------aaaccctacccgaatgtagaaaggtcatatttttgtttttgtttagggggtt 19003787  T
Q  271 gataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgtt 370  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||| ||| || |||||||||    
T  19003788 gataatgatatgccatgttatttggtttgataattgtcatgatataagaattttcattgatagttaaaggatcaaccgaattaatcgataaggaaatgtt 19003887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 182 - 392
Target Start/End: Complemental strand, 37032384 - 37032174
Alignment:
Q  182 taacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatat 281  Q
    ||||| ||||| ||||||| ||| ||||| ||||| |||||   ||||||||||||| | |||||  ||||||||||||||| | |||||||||||||||    
T  37032384 taacggggatagatgtacccacctcgaacccatactcaaactacacccgaatgtagaaaggtcatgtttttgtttttgttgatggggttgataatgatat 37032285  T
Q  282 gccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgc 381  Q
    | ||||||||||||||| |||| | |||||||||| ||| |||||||||| ||||||||||||||| |||||||||||| | |||||||||||||| |||    
T  37032284 gtcatgttatttggtttgataactatcatgatataagaattttcattgatggttaaaggagcaaccgaattattcggtaagaaaatgttaaaatgagcgc 37032185  T
Q  382 atattcttcga 392  Q
    | ||| |||||    
T  37032184 aaattattcga 37032174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 47 - 282
Target Start/End: Original strand, 35069800 - 35070034
Alignment:
Q  47 taggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttggg 146  Q
    |||| |||||||||||   ||||||||| | |||| | |||||||||||  ||||||| ||| ||||||| |||||| ||| ||| | ||||  |||| |    
T  35069800 taggcatggtaacaaaatccatgtccatggatacc-gcccaaaccaaccccgatttgacggagtttctccaatttgactggatttgggtatgagtttgag 35069898  T
Q  147 ttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcat 246  Q
    ||||||||||||||| ||||||| |||  ||||| ||||  ||||||||||||| ||||||||| ||||| ||||||||||||||||||||| |  ||||    
T  35069899 ttttccccgatttcataatacgggtacaagacgggtaacagggatatatgtacccaccccgaacccatactcaaaccctacccgaatgtagaaagatcat 35069998  T
Q  247 aattttgtttttgttgaggaggttgataatgatatg 282  Q
    | ||||||||||||||||| ||||||||||||||||    
T  35069999 atttttgtttttgttgagggggttgataatgatatg 35070034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 141 - 382
Target Start/End: Original strand, 12718776 - 12719010
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    ||||| ||||||||||||||| ||||||  |||| ||||| |||||   ||||||||||| |||| |||| |||||||||||| ||||| |||||| | |    
T  12718776 tttggattttccccgatttcataatacgtgtacgagacgggtaacggaaatatatgtacccaccctgaacccatacccaaacc-tacccaaatgtaaaaa 12718874  T
Q  241 tgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg 340  Q
     |||||      ||||||||||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||| |||||||||||||| ||||||||    
T  12718875 ggtcat------gtttttgttgagggggttgataatgatatgtcatgttatttggtttgataattatcatgatataagaactttcattgatcgttaaagg 12718968  T
Q  341 agcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    || |||  | |||||||||| | |||| ||||||||| ||||    
T  12718969 agaaactgagttattcggtaagaaaatattaaaatgagcgca 12719010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 212 - 380
Target Start/End: Complemental strand, 19892986 - 19892821
Alignment:
Q  212 catacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatg 311  Q
    |||||||| |||||||| ||||||||| |  ||||| ||||||||||    ||| |||||||||||||||| ||| ||||||||||| ||||||||||||    
T  19892986 catacccataccctacctgaatgtagaaaactcatatttttgtttttt---agggggttgataatgatatgtcatcttatttggtttgataattgtcatg 19892890  T
Q  312 atataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacg 380  Q
    ||||| ||| ||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||    
T  19892889 atataagaaatttcattgataattaaaggagcaaccgaattatttggtaaggaaatgttaaaatgaacg 19892821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 254 - 375
Target Start/End: Original strand, 48024385 - 48024505
Alignment:
Q  254 tttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaatta 353  Q
    ||||||||||||  ||||||||| ||||| ||| ||||| ||||| |||||||||||||||||  |||||||||||||||||||| |||||||| |||||    
T  48024385 tttttgttgagggagttgataattatatgacatattatt-ggtttgataattgtcatgatataaaaactttcattgatagttaaatgagcaaccgaatta 48024483  T
Q  354 ttcggtatggaaatgttaaaat 375  Q
    |||| || | ||||||||||||    
T  48024484 ttcgataagaaaatgttaaaat 48024505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 23058574 - 23058454
Alignment:
Q  118 atttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacc 217  Q
    |||||| |||||||   ||||| |||| |||||| ||||||||||||| ||  |||| ||||| ||||| ||||||| ||||| ||||||||| ||||||    
T  23058574 atttgactgggtttgagtatgggtttgagttttctccgatttcaaaatgcgagtacgagacgggtaacggggatataggtacccaccccgaacccatacc 23058475  T
Q  218 caaaccctacccgaatgtaga 238  Q
    |||||||||||||||| ||||    
T  23058474 caaaccctacccgaatataga 23058454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 278 - 382
Target Start/End: Original strand, 35077330 - 35077433
Alignment:
Q  278 atatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatga 377  Q
    ||||| ||| ||||||||||| || |||||||||| ||| ||||||||| |||||||||||||||||||| ||||| |||| | | ||||||||||||||    
T  35077330 atatgacatattatttggtttgattattgtcatgacatatgaactttcactgatagttaaaggagcaaccgaatta-tcggaaagaaaatgttaaaatga 35077428  T
Q  378 acgca 382  Q
     ||||    
T  35077429 gcgca 35077433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 99 - 234
Target Start/End: Original strand, 9982852 - 9982987
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||||||| |||||||| ||||| ||||||| | ||||  ||||  |||||||| ||||||||| ||||  | |||| || ||||||| ||||| |||    
T  9982852 atttgatggattttctccgttttgactgggtttgggtatgagtttgaattttccccaatttcaaaacacgggaatgggatgggtaacgagtatataggta 9982951  T
Q  199 ccaaccccgaacacatacccaaaccctacccgaatg 234  Q
    || ||||||||| |||||||||||||  ||||||||    
T  9982952 cccaccccgaacccatacccaaacccatcccgaatg 9982987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 29936499 - 29936418
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||| ||||||||||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  29936499 tgggttttccccgatctcaaaatacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 29936418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 389
Target Start/End: Complemental strand, 17516385 - 17516262
Alignment:
Q  268 gttgataatgatatgccatgttatttggtttcataattgtc--atgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaa 365  Q
    ||||||||||||||| ||||||||||||||| |||| | ||  |||||||| ||||||| ||| || |||||||||| || ||||||||| |||| | |     
T  17516385 gttgataatgatatgtcatgttatttggtttgataactatcatatgatataagaacttttattaatggttaaaggagaaatcaaattattaggtaagaag 17516286  T
Q  366 atgttaaaatgaacgcatattctt 389  Q
    |||||||||| | |||| ||||||    
T  17516285 atgttaaaatcagcgcaaattctt 17516262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 12495117 - 12494998
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| ||| |||||| ||||||||||||| ||||||| ||||||  ||||| | ||||| ||||| ||| ||||| |||||||    
T  12495117 tttgactgggtttcggtatgggttttggtttttcccgatttcaaaacacggatatgggacgtgtaacgggtatataggtacccacctcgaacccataccc 12495018  T
Q  219 aaaccctacccgaatgtaga 238  Q
    ||||||  ||| ||||||||    
T  12495017 aaacccgtcccaaatgtaga 12494998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 36187193 - 36187307
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||||||||| |||||| |||| || ||||||| ||||| | ||||| ||||| |||| |||    
T  36187193 tttccccgttttgactgggtttgggtatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccctgaa 36187292  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  36187293 cccatacccaaaccc 36187307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 34085351 - 34085242
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||| ||||| ||||||  ||||||  |||||||||| ||||||||||||| |||  || |||| || ||||| || |||||||||| ||||||||    
T  34085351 tttctccgctttgactgggttaggatatgagtttgggtttttcccgatttcaaaacacgagtatgggatgggtaacggggttatatgtacccaccccgaa 34085252  T
Q  210 cacataccca 219  Q
    | ||||||||    
T  34085251 cccataccca 34085242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 51421965 - 51421860
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| | |||||||| |||||| |||||| |||| || ||||||| ||||  | ||||||||||| ||||||||| |||||||    
T  51421965 tttgactgggtttgggtatgggtatgggtttttcccgatctcaaaacacgggtatgggacgggtaacatgtatatatgtacccaccccgaacccataccc 51421866  T
Q  219 aaaccc 224  Q
    ||||||    
T  51421865 aaaccc 51421860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 99 - 219
Target Start/End: Complemental strand, 17135074 - 17134954
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| |||||| | ||||| ||||||| | | ||| | |||||||||||||||||||||| |||| || | ||||| ||||| | ||||| |||    
T  17135074 atttgacggattttctctgttttgactgggtttgggtgtgggtatgggttttccccgatttcaaaacacgggtatgagacgggtaacgggtatataggta 17134975  T
Q  199 ccaaccccgaacacataccca 219  Q
    ||| |||||||| ||||||||    
T  17134974 ccatccccgaacccataccca 17134954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 218
Target Start/End: Complemental strand, 5181146 - 5181047
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| | ||||||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||| ||||| ||| |||||||    
T  5181146 tttgactgggtttaggtatgggtatgggttttccccgatttcaaaatacgggtatgggacgggtaacgggtatataggcacccaccccaaacccataccc 5181047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 41476976 - 41477039
Alignment:
Q  161 aaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||  |||||||||||||||| ||||||||||||| ||||||||  |||||||||||||    
T  41476976 aaaatacgagtacgggacggataacgtggatatatgtacccaccccgaatccatacccaaaccc 41477039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 23490753 - 23490858
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| | ||||||||||||||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| ||||||     
T  23490753 tttgactgggtttgggtatgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacca 23490852  T
Q  219 aaaccc 224  Q
    ||||||    
T  23490853 aaaccc 23490858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 39219343 - 39219262
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    ||||||||||||||||||| |||| |||| ||||| ||   ||||| ||||| ||||||| ||||||||| |||||||||||    
T  39219343 tttgggttttccccgattttaaaacacgggtacggaacaagtaacggggatacatgtacccaccccgaacccatacccaaac 39219262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 48125687 - 48125768
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    ||||| |||| || ||||| |||| |||| |||||||||| ||||||||||||| ||| | ||||||||| |||||||||||    
T  48125687 tttggatttttcctgattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccatacccaaac 48125768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 276 - 348
Target Start/End: Complemental strand, 38733964 - 38733892
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaacca 348  Q
    |||||||| |||||||||||||| |||||||||||| ||||  || | ||||||||| |||||| ||||||||    
T  38733964 tgatatgctatgttatttggtttgataattgtcatgttataaaaattgtcattgatatttaaagaagcaacca 38733892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 16409058 - 16408944
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | |||||||||||| ||||||||| |||| || ||||||| ||||  | ||||| ||||| ||||||||    
T  16409058 tttccccgttttgactgggtttgggtatgggtatgggttttccccaatttcaaaacacgggtatgggacgggtaacaggtatataggtaccgaccccgaa 16408959  T
Q  210 cacatacccaaaccc 224  Q
    | |||| | ||||||    
T  16408958 cccatagctaaaccc 16408944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 28298014 - 28297936
Alignment:
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||||||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  28298014 gttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 28297936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 34673270 - 34673368
Alignment:
Q  125 tgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaacc 223  Q
    ||||||| | ||||| |||||||||| ||| ||||||||| |||| || | ||| | ||||| | ||||| ||||| ||||||||| ||||||||||||    
T  34673270 tgggtttgggtatgggtttgggtttttcccaatttcaaaacacgggtatgagactggtaacgggtatataggtacccaccccgaacccatacccaaacc 34673368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 38686747 - 38686673
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacata 215  Q
    ||||| ||||||||||||| ||||||||| || |||||| |||||  || |||||||||| ||||||||| ||||    
T  38686747 tttggattttccccgattttaaaatacgggtatgggacgaataacatggttatatgtacccaccccgaacccata 38686673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 49250746 - 49250860
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||| ||||| ||||||| | ||||| | || |||||||||||| |||||| |||| || ||||||| ||| | | ||||| ||| | ||| ||||    
T  49250746 tttctccgttttgactgggtttgggtatgggtatgagttttccccgatctcaaaacacgggtatgggacgggtaatgggtatataggtatccacctcgaa 49250845  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  49250846 cccatacccaaaccc 49250860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 19572494 - 19572591
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    ||||| ||||||| | ||||| | |||||||| ||||||||||||| |||| || ||||| | ||||| | ||||| ||||| ||||||||| |||||    
T  19572494 tttgactgggtttgggtatgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccatac 19572591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 24236743 - 24236848
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| | ||||||||||||||| |||||| |||| || || ||||  |||| | ||||| ||||| ||||||||| ||||| |    
T  24236743 tttgactgggtttaggtatgggtatgggttttccccgatctcaaaacacgggtatggaacggggaacgggtatataggtacccaccccgaacccatactc 24236842  T
Q  219 aaaccc 224  Q
    ||||||    
T  24236843 aaaccc 24236848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 29871289 - 29871386
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
    ||||||||||| |||||||||||| | || || ||||| | ||||  | ||||| ||||| |||| |||| |||||||||||||  ||||||||||||    
T  29871289 tttgggttttctccgatttcaaaacatgggtatgggacaggtaactggtatataggtacccaccctgaactcatacccaaacccgtcccgaatgtaga 29871386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 44615457 - 44615562
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||  ||||||||||||| ||||| |||| |||| || ||||||| ||||  | ||||| ||||| ||||| ||| |||||||    
T  44615457 tttgactgggtttgggtatgagtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcataccc 44615556  T
Q  219 aaaccc 224  Q
    ||||||    
T  44615557 aaaccc 44615562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 44793112 - 44793007
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||  ||||||||||||| ||||| |||| |||| || ||||||| ||||  | ||||| ||||| ||||| ||| |||||||    
T  44793112 tttgactgggtttgggtatgagtttgggttttccctgatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcataccc 44793013  T
Q  219 aaaccc 224  Q
    ||||||    
T  44793012 aaaccc 44793007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 33293508 - 33293588
Alignment:
Q  114 tccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatata 194  Q
    |||| ||||||||||||| | ||||  |||||||||| ||||||||||||| |||| || ||||||| ||| | |||||||    
T  33293508 tccgttttgattgggtttgggtatgagtttgggtttttcccgatttcaaaacacgggtatgggacgggtaatggggatata 33293588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 145 - 216
Target Start/End: Original strand, 3627993 - 3628064
Alignment:
Q  145 ggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    |||||||||||||||||||| |||| || ||||||| ||||| | || || ||||| ||||||||| |||||    
T  3627993 ggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatgtaggtacccaccccgaacccatac 3628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 34673398 - 34673473
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||||||||||||| |||| ||||||| | || ||||  ||||  |||||||| ||||||||||||| ||||    
T  34673398 tgatatgccatgttattttgtttgataattgccgtgttataaaaactaccattgatatttaaaggagcaactaaat 34673473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 36617468 - 36617381
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttc-aaaatacggatacgggacggataacgaggatatatgtaccaaccc 205  Q
    ||||||||||||| ||||||  |||| ||||||| ||||||| |||| | || ||||||||| |||||||| ||||| ||||| ||||    
T  36617468 tttgattgggtttagatatgagtttgagttttccacgatttcaaaaacatgggtacgggacgaataacgagaatataggtacccaccc 36617381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 44615592 - 44615667
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||||||||||||| |||| ||||||||| || ||||  |||| | ||||||| ||||||||| ||| ||||    
T  44615592 tgatatgccatgttattttgtttgataattgtcgtgttataaaaactattattgatatttaaaggagaaactaaat 44615667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 44632252 - 44632327
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    ||||||||||| |||||| |||| | ||||||| || ||||  |||| ||||||||| ||||||||||||| ||||    
T  44632252 tgatatgccatattattttgtttgacaattgtcgtgttataaaaactatcattgatatttaaaggagcaactaaat 44632327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 44792977 - 44792902
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||||||||||||| |||| ||||||||| || ||||  |||| | ||||||| ||||||||| ||| ||||    
T  44792977 tgatatgccatgttattttgtttgataattgtcgtgttataaaaactattattgatatttaaaggagaaactaaat 44792902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 47644864 - 47644958
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgta 236  Q
    ||||||||||||||||| |||||| || | |||||||||||||| | ||||| | ||||| ||||||||| |||| ||| || |  ||||||||||    
T  47644864 tttgggttttccccgatctcaaaacacaggtacgggacggataatg-ggatagaagtacctaccccgaactcatatccatactcgtcccgaatgta 47644958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 50426667 - 50426742
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    |||| |||||| |||||||||| |||| || | ||||||||||| | ||||| ||||| ||||||||| |||||||    
T  50426667 tgggctttccctgatttcaaaacacgggtatgagacggataacgggtatataggtacccaccccgaacccataccc 50426742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 200
Target Start/End: Complemental strand, 24710963 - 24710873
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtacc 200  Q
    |||| ||| ||||| ||||||| ||||||  | ||||||||||||||| |||||| |||| || ||||||| ||||| | ||||| |||||    
T  24710963 tttccccgttttgactgggtttggatatgagtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacc 24710873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 16903630 - 16903513
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||||||||||| |  |||| ||| | |||| ||| |||| |||| |||  |||||||  | ||| | ||||||| ||||| ||||||||| |||||||    
T  16903630 tttgattgggtttgggcatgggtttagatttttcccaattttaaaacacgagtacgggataggtaatggggatataggtacccaccccgaactcataccc 16903531  T
Q  219 aaaccctacccgaatgta 236  Q
    ||||||  ||||||||||    
T  16903530 aaacccgtcccgaatgta 16903513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 356
Target Start/End: Original strand, 17092075 - 17092156
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgat-ataggaactttcattgatagttaaaggagcaaccaaattattc 356  Q
    ||||||| |||||||||| |||| |||||||||||| | |||  |||| ||||||||| |||||||| |||| |||| ||||    
T  17092075 tgatatgtcatgttattttgtttgataattgtcatgttaataaaaactatcattgatatttaaaggatcaactaaatcattc 17092156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 18354077 - 18354162
Alignment:
Q  134 atatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccca 219  Q
    |||||| | |||||||||||||||||||||| | || || ||||||| ||||| | ||||| || || |||||||||  |||||||    
T  18354077 atatgggtatgggttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataagttcccaccccgaaccgataccca 18354162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 23058291 - 23058254
Alignment:
Q  291 tttggtttcataattgtcatgatataggaactttcatt 328  Q
    |||||||| ||||||||||||||||| |||||||||||    
T  23058291 tttggtttgataattgtcatgatataagaactttcatt 23058254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 23058363 - 23058322
Alignment:
Q  257 ttgttgaggaggttgataatgatatgccatgttatttggttt 298  Q
    ||||||||| |||| ||||||||||| |||||||||||||||    
T  23058363 ttgttgagggggttaataatgatatgacatgttatttggttt 23058322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 23968686 - 23968625
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacgg 180  Q
    ||||||||||||| | ||||| | ||||||||||||| |||||||| |||| || |||||||    
T  23968686 tttgattgggtttgggtatgggtatgggttttccccggtttcaaaacacgggtatgggacgg 23968625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 35936833 - 35936898
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaacccc 206  Q
    |||||||||||||||||||||||  |||  || ||||||||||||| | ||||| ||||| |||||    
T  35936833 tttgggttttccccgatttcaaatcacgagtatgggacggataacgggtatataggtacccacccc 35936898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 45866191 - 45866272
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||||||||||||||||| |||| || | ||| | ||| ||| ||||| ||||| ||||| ||| |||||||| ||||    
T  45866191 tgggttttccccgatttcaaaacacgggtatgagacaggtaatgagtatataggtacccaccccaaactcatacccataccc 45866272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 356
Target Start/End: Original strand, 50426771 - 50426852
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgat-ataggaactttcattgatagttaaaggagcaaccaaattattc 356  Q
    ||||||| |||||||||| |||| |||||||||||| | |||  |||| ||||||||| |||||||| |||| |||| ||||    
T  50426771 tgatatgtcatgttattttgtttgataattgtcatgttaataaaaactatcattgatatttaaaggatcaactaaatcattc 50426852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 148 - 200
Target Start/End: Original strand, 5293416 - 5293468
Alignment:
Q  148 tttccccgatttcaaaatacggatacgggacggataacgaggatatatgtacc 200  Q
    |||| ||||||||||||||| | ||| |||||||||||  |||||||||||||    
T  5293416 tttctccgatttcaaaatactggtacaggacggataacagggatatatgtacc 5293468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 38841655 - 38841623
Alignment:
Q  137 tggatttgggttttccccgatttcaaaatacgg 169  Q
    |||||||||||||||||||||||||||| ||||    
T  38841655 tggatttgggttttccccgatttcaaaagacgg 38841623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 181; Significance: 1e-97; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 118 - 382
Target Start/End: Original strand, 38342500 - 38342763
Alignment:
Q  118 atttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacc 217  Q
    |||||||||||||| ||||||| |||| |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||    
T  38342500 atttgattgggtttggatatgggtttgagttttccccgattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccatacc 38342599  T
Q  218 caaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatatag 317  Q
    ||||||||||||||||||||| | ||| |  ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||     
T  38342600 caaaccctacccgaatgtagaaaggtcgtgtttttgtttttgttgagg-ggttgataatgatatgtcatgttatttggtttgataattgtcatgatataa 38342698  T
Q  318 gaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||    
T  38342699 gaactttcattgatagttaaaggagcaaccgaataattcggtaaggaaatgttaaaatgaacgca 38342763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 135 - 382
Target Start/End: Complemental strand, 3547257 - 3547010
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatg 234  Q
    ||||||||||||||||  ||||||||||||||||| |||||||||| |||||  |||||||||||| ||||||||| |||| ||||||||||||||||||    
T  3547257 tatggatttgggtttttaccgatttcaaaatacgggtacgggacgggtaacggagatatatgtacccaccccgaacccatatccaaaccctacccgaatg 3547158  T
Q  235 tagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagt 334  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||  |||||| |||||||||    
T  3547157 tagaaatgtcatatttttgtttttgttgagggggttgataatgatatgctatgttatttggtttgataattgtcatgatatacaaacttttattgatagt 3547058  T
Q  335 taaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    |||||||| |||  ||||||||||||   |||||||||||||||||||    
T  3547057 taaaggagaaactgaattattcggtaaataaatgttaaaatgaacgca 3547010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 141 - 382
Target Start/End: Complemental strand, 43371638 - 43371400
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    |||| |||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |    
T  43371638 tttgagttttccccgattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcatacccaaaccctacccgaatgtagaaa 43371539  T
Q  241 tgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg 340  Q
    ||||||| ||||||||||||||||| |||||| |||||||| |||   |||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  43371538 tgtcatatttttgtttttgttgagggggttgaaaatgatatccca---tatttggtttgataattgtcatgatataagaactttcattgatagttaaagg 43371442  T
Q  341 agcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    || |||| |||||||||||| | |||||||||||||| ||||    
T  43371441 agaaaccgaattattcggtaagaaaatgttaaaatgagcgca 43371400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 143 - 382
Target Start/End: Complemental strand, 14331610 - 14331371
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatg 242  Q
    |||||||||||| |||| ||||||| | || ||||||| ||||| ||||||||||||| || |||||| ||||||||||||||||||||||||||| |||    
T  14331610 tgggttttcccctatttaaaaatacaggtatgggacgggtaacggggatatatgtacccactccgaacccatacccaaaccctacccgaatgtagaaatg 14331511  T
Q  243 tcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggag 342  Q
    ||||| ||||||||||||||||| |||  |||||||||||| |||||||||||||| ||||||  ||||||||| |||||||||||||||||||||||||    
T  14331510 tcatatttttgtttttgttgagggggtatataatgatatgctatgttatttggtttgataattaacatgatataagaactttcattgatagttaaaggag 14331411  T
Q  343 caaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||  |||| |||| || |||||||||||||||| ||||    
T  14331410 caactgaattgttcgataaggaaatgttaaaatgagcgca 14331371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 45 - 382
Target Start/End: Original strand, 24051532 - 24051861
Alignment:
Q  45 agtaggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttg 144  Q
    |||||| |||| ||||||   ||||||||| |||||| | ||||| ||||   ||||||||||| |||||||||||| ||||||||| | ||||| ||||    
T  24051532 agtaggcatggcaacaaaatccatgtccatgggtacctgcccaaatcaactccgatttgatggattttctccgatttaattgggtttgggtatgggtttg 24051631  T
Q  145 ggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtc 244  Q
    || |||| ||||||| ||||||||  || ||||||| ||||  ||||||||||||| ||||||||| |||||||      |||||||||||||| | |||    
T  24051632 ggatttctccgattttaaaatacgagtatgggacgggtaacagggatatatgtacctaccccgaacccataccc------tacccgaatgtagaaaggtc 24051725  T
Q  245 ataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagca 344  Q
     |  |||| || ||||||||| |||||||||||||||||||| ||||||||||| ||| |||| |||||||| |||||||||||||||||||||||||||    
T  24051726 gt--tttttttgttgttgagggggttgataatgatatgccatattatttggtttgatagttgtgatgatataagaactttcattgatagttaaaggagca 24051823  T
Q  345 accaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    |||||||||||||||| | |||||||||||||| ||||    
T  24051824 accaaattattcggtaagaaaatgttaaaatgagcgca 24051861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 52 - 377
Target Start/End: Complemental strand, 30979098 - 30978774
Alignment:
Q  52 atggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttc 151  Q
    |||| |||||| | ||||||||| |||||||| ||||| |||||  ||||| | ||| ||| ||  |||||| |||||||  |||||  ||||||||||     
T  30979098 atggcaacaaaacccatgtccatgggtacccgcccaaatcaaccccgatttaacggattttttca-atttgactgggtttgaatatgagtttgggttttt 30979000  T
Q  152 cccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattt 251  Q
    |||||||||||||||||| |||||   |||||||||||||||||||| | ||||||||| |||||||||||||||||| |||||||| | |||||  |||    
T  30978999 cccgatttcaaaatacgggtacgga--ggataacgaggatatatgtatccaccccgaacccatacccaaaccctacccaaatgtagaaaggtcatttttt 30978902  T
Q  252 tgtttttgtt--gaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaa 349  Q
    | ||||| ||  |||| | |||||||| ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||  |    
T  30978901 ttttttttttatgaggggtttgataattatatgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggagcaactga 30978802  T
Q  350 attattcggtatggaaatgttaaaatga 377  Q
    |||||||| || | ||||||||||||||    
T  30978801 attattcgataagaaaatgttaaaatga 30978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 136 - 374
Target Start/End: Original strand, 6164472 - 6164715
Alignment:
Q  136 atggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgt 235  Q
    |||| |||||||||||||| ||||||||||  || |||||||||| |||||  |||||||||||| ||||||||| |||||| | ||||||||||||| |    
T  6164472 atgggtttgggttttccccaatttcaaaatttgggtacgggacgggtaacggtgatatatgtacccaccccgaactcatacctagaccctacccgaatat 6164571  T
Q  236 agagatgtcataattttg-----tttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattga 330  Q
    ||| | |||||| ||||      |||||||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  6164572 agaaaggtcatattttttatttttttttgttgaaggggttgataatgatatgccatgttatttgatttgataattgtcatgatatatgaactttcattga 6164671  T
Q  331 tagttaaaggagcaaccaaattattcggtatggaaatgttaaaa 374  Q
    ||||||||||||||||||||||||||| || | |||||||||||    
T  6164672 tagttaaaggagcaaccaaattattcgataagaaaatgttaaaa 6164715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 135 - 382
Target Start/End: Complemental strand, 4428015 - 4427768
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatg 234  Q
    ||||| |||||||||||||||| |||| ||||||| || |||||||  ||||  |||||||| | | ||| ||||| |||||||||||||||||||||||    
T  4428015 tatgggtttgggttttccccgacttcataatacgggtaagggacgggcaacggtgatatatggatccacctcgaacccatacccaaaccctacccgaatg 4427916  T
Q  235 tagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagt 334  Q
    |||| | || ||  ||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||| | |||||||||| |||||||||||||| ||    
T  4427915 tagaaaggttatgtttttgtttttgttgagggggttcataatgatatgtcatgttatttggtttgataactatcatgatataagaactttcattgatggt 4427816  T
Q  335 taaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||||||||  ||||||||| || |||||||||||||||| ||||    
T  4427815 taaaggagcaacttaattattcgataaggaaatgttaaaatgagcgca 4427768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 71 - 381
Target Start/End: Complemental strand, 26755895 - 26755597
Alignment:
Q  71 ccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgga 170  Q
    |||| |||||| | |||||||||||  ||||||| ||  |||  ||||||||| ||||||| | ||||  |||||||||||  |||||| |||||| ||     
T  26755895 ccatgggtacctgcccaaaccaaccccgatttgacgggtttttcccgatttgactgggtttgggtatgagtttgggttttcttcgattttaaaatatggg 26755796  T
Q  171 tacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggtt 270  Q
    ||  |||||  ||||| |||||||||||||           ||||||||||||||||||||||||| | | |||||  |||| |||||||||||||||||    
T  26755795 tatcggacgattaacggggatatatgtacc-----------catacccaaaccctacccgaatgtaaaaaggtcat--ttttatttttgttgaggaggtt 26755709  T
Q  271 gataatgatatgccatgttatttggtttcataattgtcatgatat-aggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgt 369  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||  |||| ||||||| | ||||||    
T  26755708 gataatgatatgccatgttatttggtttgataattgtcatgatataaagaactttcattgatagttaaaggagcaactgaatttttcggtaagtaaatgt 26755609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 141 - 392
Target Start/End: Complemental strand, 18485733 - 18485479
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    |||||||| ||| |||||| ||||||||| ||| | |||| ||||| ||||||||||||| |||| |||| |||||||||||| ||||| |||| ||| |    
T  18485733 tttgggttatcctcgattttaaaatacgggtacagtacgggtaacggggatatatgtacccaccctgaacccatacccaaaccttacccaaatgcagaaa 18485634  T
Q  241 tgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatg-----atataggaactttcattgatagtt 335  Q
     || ||| |||||||||| |  ||| ||||||||||| |||||||| ||||||||||| ||||||||||||     ||||| ||| ||||||||||||||    
T  18485633 ggttatatttttgttttttt--agggggttgataatggtatgccatcttatttggtttgataattgtcatgtcatgatataagaattttcattgatagtt 18485536  T
Q  336 aaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgcatattcttcga 392  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||| ||| |||||    
T  18485535 aaaggagcaaccgaattattcggtaaggaaatgttaaaatgaacgcaaattgttcga 18485479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 190 - 382
Target Start/End: Complemental strand, 42576648 - 42576456
Alignment:
Q  190 atatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgtt 289  Q
    ||||||||||| |||| |||| ||||| ||||||||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||| ||||||    
T  42576648 atatatgtacccaccctgaacccatacacaaaccctacccgaatgtagaaaggtcatatttttgtttttgttaaggaggttgataatgatatgtcatgtt 42576549  T
Q  290 atttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||| | ||||||| ||||   |||| ||||||||| ||||    
T  42576548 atttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaatcgaattatttggtaacaaaattttaaaatgagcgca 42576456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 141 - 380
Target Start/End: Complemental strand, 44057968 - 44057720
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaacccc-gaacacatacccaaaccctacccgaatgtagag 239  Q
    ||||| ||||||| ||||||||||||| | |||||||||| ||| | ||||||||||||| ||||| |||| |||||||||||||||||||||||||||     
T  44057968 tttggattttccctgatttcaaaataccggtacgggacgggtaatggggatatatgtacccacccccgaacccatacccaaaccctacccgaatgtagaa 44057869  T
Q  240 atgtcata-------attt-tgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgat 331  Q
    | ||||||       || | | | ||| || ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||| |  |||    
T  44057868 aggtcatatacatatatatatatattttttaaggaggttgataatgatatgctatgttatttggtttgataattgtcatgatataagaacttttacggat 44057769  T
Q  332 agttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacg 380  Q
    |||||||| ||||||| ||||||||||||   |||| ||||||||||||    
T  44057768 agttaaagaagcaaccgaattattcggtaacaaaattttaaaatgaacg 44057720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 224
Target Start/End: Original strand, 7314610 - 7314735
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| |||| ||| ||||| ||||||| ||||||| | ||||||||||||||||| ||||||||  || ||||||| ||||| | ||||| ||     
T  7314610 atttgacggattttccccgttttgactgggtttggatatgggtatgggttttccccgattttaaaatacgagtatgggacgggtaacgggtatataggtt 7314709  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || ||||||||| |||||||| ||||    
T  7314710 cccaccccgaacccatacccacaccc 7314735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 238
Target Start/End: Original strand, 44746082 - 44746210
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| |||||||| |||| | |||||||||||||||||||||||||||||| ||| ||| ||||||| ||| | | ||||||||||| ||  | ||    
T  44746082 tttccccgttttgattgagtttgggtatggatttgggttttccccgatttcaaaacacgaatatgggacgggtaatgggtatatatgtacccacttcaaa 44746181  T
Q  210 cacatacccaaaccctacccgaatgtaga 238  Q
    | ||||| |||||||  ||| ||||||||    
T  44746182 ctcatactcaaacccgtcccaaatgtaga 44746210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 24414105 - 24414219
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||||||||||| | ||||| | | ||||||||||||| |||||| |||| || ||||||| ||||  | ||||| ||||| ||||||||    
T  24414105 tttccccgttttgattgggtttgggtatgggtatcggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaa 24414204  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  24414205 cccatacccaaaccc 24414219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 30847062 - 30846948
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||||||||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||    
T  30847062 tttccccgttttgactgggtttgggtatgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaa 30846963  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  30846962 cccatacccaaaccc 30846948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 145 - 238
Target Start/End: Complemental strand, 25210458 - 25210365
Alignment:
Q  145 ggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
    |||||| ||||| || |||| |||| || ||||||| ||||||||||||||||||| ||||| ||| |||||| ||||||  ||||||||||||    
T  25210458 ggtttttcccgactttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccataccaaaacccctcccgaatgtaga 25210365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 15546834 - 15546734
Alignment:
Q  136 atggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgt 235  Q
    |||| |||||||||||||||||||||||| |||| || ||||||| ||||  || ||||| |||| |||| |||| |||||||| ||||| ||| |||||    
T  15546834 atgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacatggttatatatacccaccctgaacccatacccatacccttcccaaatgt 15546735  T
Q  236 a 236  Q
    |    
T  15546734 a 15546734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 35248367 - 35248486
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    |||||||| |||| | || || |||||||||||| ||||| ||||| |||| || ||||||| ||| | ||||| | ||||| ||||||||| |||||||    
T  35248367 tttgattgagtttgggtacgggtttgggttttccacgattacaaaacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccataccc 35248466  T
Q  219 aaaccctacccgaatgtaga 238  Q
    ||||||  || |||||||||    
T  35248467 aaacccgtcctgaatgtaga 35248486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 22900885 - 22900796
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||| |||||||||| ||||||||||||| |||| || ||||||  ||||| || ||||| |||| ||||||||| |||||||| ||||    
T  22900885 tatgggtttgggtttttcccgatttcaaaacacgggtatgggacgagtaacggggttatatatacccaccccgaactcatacccataccc 22900796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 37999566 - 37999485
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||| |||||| |||| || | ||||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  37999566 tgggttttccccgatctcaaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaactcatacccaaaccc 37999485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 218
Target Start/End: Complemental strand, 37106808 - 37106700
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| || |||| | ||||| | |||||||||||||||||||||| |||| || ||||||| ||||| | ||||| ||||| || |||||    
T  37106808 tttccccgttttgactgagtttgggtatgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccactccgaa 37106709  T
Q  210 cacataccc 218  Q
    | |||||||    
T  37106708 cccataccc 37106700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 31942302 - 31942377
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||||||||||||| |||| ||||||||| || ||||  ||||  |||||||| ||||||||||||| ||||    
T  31942302 tgatatgccatgttattttgtttgataattgtcgtgttataaaaactaccattgatatttaaaggagcaactaaat 31942377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 10212513 - 10212454
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggac 178  Q
    ||||| ||||||||| ||||  |||||||||||||||||||| ||| |||| ||||||||    
T  10212513 tttgactgggttttggtatgagtttgggttttccccgatttccaaacacggttacgggac 10212454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 11959070 - 11959019
Alignment:
Q  171 tacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    |||||||||| ||||||||||||||||||   |||||||| |||||||||||    
T  11959070 tacgggacgggtaacgaggatatatgtacatgccccgaactcatacccaaac 11959019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 13705370 - 13705448
Alignment:
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||||||| |||| || | ||| | ||||| | ||||| ||||| ||||||||| |||||| ||||||    
T  13705370 gttttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggtacccaccccgaacccatacctaaaccc 13705448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 19104799 - 19104869
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgg 169  Q
    |||||||||  ||| |||| ||||||||||||| | ||||  |||||||||||||||||||| ||| ||||    
T  19104799 atttgatgggttttttccgttttgattgggtttgggtatgagtttgggttttccccgatttccaaacacgg 19104869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 31942126 - 31942212
Alignment:
Q  78 tacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaa 164  Q
    |||||| ||||||||| ||  |||||||||  |||  ||| ||||| ||||||| ||||||| |||||||| ||| |||||||||||    
T  31942126 tacccgcccaaaccaaactcaatttgatgggtttttcccgctttgactgggtttggatatgggtttgggttatcctcgatttcaaaa 31942212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 224
Target Start/End: Original strand, 36128051 - 36128193
Alignment:
Q  82 cgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacgga 181  Q
    ||||| |||||| | | |||||| ||| |||| ||| ||||| ||||||| | ||||| | || | |||||||||| || ||| |||| || |||| ||     
T  36128051 cgtccgaaccaaacctaatttgacggattttccccgttttgactgggtttgggtatgggtatgtggtttccccgatctcgaaacacgggtatgggatggg 36128150  T
Q  182 taacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||| | ||||| ||||  ||||||||| |||||||||||||    
T  36128151 taacgggtatataggtactcaccccgaacccatacccaaaccc 36128193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 45256903 - 45256825
Alignment:
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||||||| |||| || | ||||| ||| | | ||||| ||||| ||||||||| |||||| ||||||    
T  45256903 gttttccccgatttcaaaacacgggtatgagacggttaatgggtatataagtacccaccccgaacccatacctaaaccc 45256825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 9632469 - 9632388
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||| || ||| |||| || ||||||| ||| | | ||||| ||| | ||||||||| |||||||||||||    
T  9632469 tgggttttccccgatctcgaaacacgggtatgggacgggtaatgggtatataggtatccaccccgaacccatacccaaaccc 9632388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 18106082 - 18106151
Alignment:
Q  100 tttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgg 169  Q
    ||||| ||| |||| ||| ||||| ||||||| ||||||| | ||||||||||||||| |||||| ||||    
T  18106082 tttgacggattttccccgttttgactgggtttggatatgggtatgggttttccccgatctcaaaacacgg 18106151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 6028005 - 6028081
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatat-aggaactttcattgatagttaaaggagcaaccaaat 351  Q
    ||||| |||||||||||| |||| ||||||||| || ||| |  |||| ||||||||| ||||||||||||| ||||    
T  6028005 tgataagccatgttattttgtttgataattgtcgtgttataaaaaactatcattgatatttaaaggagcaactaaat 6028081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 30696995 - 30696927
Alignment:
Q  155 gatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaacc 223  Q
    ||||| |||| | ||||||| ||||| ||||   |||||||||||| ||||||||| ||||||||||||    
T  30696995 gattttaaaacatggatacgagacgggtaacagagatatatgtacccaccccgaactcatacccaaacc 30696927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 237
Target Start/End: Original strand, 35510447 - 35510543
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtag 237  Q
    |||||||||||||| ||||||||| || |||||  ||||| ||| ||||||||| ||| | ||| ||||  ||||| |||| ||  |||||||||||    
T  35510447 tttgggttttccccaatttcaaaacacagatacaagacgggtaatgaggatataggtatccacctcgaattcatactcaaatccgtcccgaatgtag 35510543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 2e-90; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 71 - 379
Target Start/End: Complemental strand, 45065409 - 45065101
Alignment:
Q  71 ccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgga 170  Q
    |||| |||||||| |||||||||||  ||||||| |   |||| || |||||| ||||||| | ||| | ||| |||||||| ||||||||||||||||     
T  45065409 ccatgggtacccgcccaaaccaaccccgatttgacgagttttccccaatttgactgggtttgggtataggtttaggttttcctcgatttcaaaatacggg 45065310  T
Q  171 tacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggtt 270  Q
    |||||||||  ||||  ||||||||||||| | ||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||    
T  45065309 tacgggacgagtaacagggatatatgtacccatcccgaacgcatacccaaaccctacccgaatgtagaaatatcatatttttgtttttgttgagggggtt 45065210  T
Q  271 gataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgtt 370  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||  ||||||||    
T  45065209 gataatgatatgctatgttatttggtttgataattgtcatgatatacgaactttcattgatagttaaaggagaaaccaaattattcggtaaagaaatgtt 45065110  T
Q  371 aaaatgaac 379  Q
    |||||||||    
T  45065109 aaaatgaac 45065101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 29527902 - 29527669
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||| |    
T  29527902 tttgggttttccccgatttcaaaatacgggtacgtgacgggtaacggggatatatgtacccaccccgaacccatacccaaaccctatccgaatgtagaaa 29527803  T
Q  241 tgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg 340  Q
     |||||| |||||||||||||||||  |||||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||    
T  29527802 ggtcata-ttttgtttttgttgagggagttgataatgatatgctatgttatttgatttgataattgtcatgatataagaactttcattgatagttaaagg 29527704  T
Q  341 agcaaccaaattattcggtatggaaatgttaaaat 375  Q
    |||||| ||||||||||||| ||||| ||||||||    
T  29527703 agcaactaaattattcggtaaggaaaggttaaaat 29527669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 57 - 375
Target Start/End: Complemental strand, 30673135 - 30672819
Alignment:
Q  57 aacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccga 156  Q
    |||||| | ||||||||| |||| |||||||||||||||   |||||| ||  |||| | ||||||||||||||| | ||||  ||||| ||||| ||||    
T  30673135 aacaaaacccatgtccatgggtatccgtccaaaccaaccacaatttgacgggttttccctgatttgattgggtttgggtatgagtttggattttctccga 30673036  T
Q  157 tttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgttt 256  Q
    ||| ||||||||| |||||||||||||| | ||||||||||||  ||| |||||  |||||||||||||||||||||||||| | |||||| ||||||||    
T  30673035 ttttaaaatacgggtacgggacggataatggggatatatgtac--acctcgaacctatacccaaaccctacccgaatgtagaaaggtcatatttttgttt 30672938  T
Q  257 ttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattc 356  Q
    ||||| ||| |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||   |||||||||||||||||| ||||||||    
T  30672937 ttgttaagggggttgataatgatatgccatgttatttggtttgatgattgtcatgatataagaactttcacgaatagttaaaggagcaaccgaattattc 30672838  T
Q  357 ggtatggaaatgttaaaat 375  Q
    ||||   ||||||||||||    
T  30672837 ggtaacaaaatgttaaaat 30672819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 141 - 382
Target Start/End: Complemental strand, 21544669 - 21544428
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    ||||| |||| |||||||||||||||||| |||||||| | ||| | ||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |    
T  21544669 tttggatttttcccgatttcaaaatacgggtacgggacaggtaatggggatatatgtacccaccccgaacccatacccaaaccctacccgaaggtagaaa 21544570  T
Q  241 tgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg 340  Q
     |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||    
T  21544569 ggtcatatttttgtttttgttaagggggttgataatgatatgccatgttatttggtttgataattgtcatgatataagaactttcacggatagttaaagg 21544470  T
Q  341 agcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||| ||| ||||||||||||   |||||||||||||| ||||    
T  21544469 agctaccgaattattcggtaacaaaatgttaaaatgagcgca 21544428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 57 - 344
Target Start/End: Original strand, 41914917 - 41915193
Alignment:
Q  57 aacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccga 156  Q
    |||||| | |||| |||| |||| ||| |||||||||||  ||||||||||| |||| ||||||||| ||||||  | ||||  ||||||||||||||||    
T  41914917 aacaaaacccatgcccatgggtaaccgcccaaaccaaccccgatttgatggattttccccgatttgactgggttcgggtatgagtttgggttttccccga 41915016  T
Q  157 tttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgttt 256  Q
    |||||||||| || ||||||| || ||||| |||||||||||||           |||||||||||||||| |||||||||| |||||||| ||||||||    
T  41915017 tttcaaaatatgggtacgggaagggtaacggggatatatgtacc-----------catacccaaaccctacacgaatgtagaaatgtcatatttttgttt 41915105  T
Q  257 ttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagca 344  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  41915106 ttgttgagggggttgataatgatatgccatgttatttggtttgataattgtcatgatataagaactttcactgatagttaaaggagca 41915193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 147 - 377
Target Start/End: Original strand, 10574430 - 10574666
Alignment:
Q  147 ttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcat 246  Q
    ||||||||||||||| ||||| | |||||||||| ||||| |||||||||||||  |||||||| ||||||||||||||||||||||||||| |  ||||    
T  10574430 ttttccccgatttcataatacaggtacgggacgggtaacggggatatatgtacccgccccgaactcatacccaaaccctacccgaatgtagaaagatcat 10574529  T
Q  247 aattttgttttt------gttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg 340  Q
      ||||||||||      |||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||| |||||||| ||||| ||||||||    
T  10574530 gtttttgtttttatttgtgttgaggaggttgataatgatatgtcatgttatttggtttgataactatcatgatataagaactttcgttgatggttaaagg 10574629  T
Q  341 agcaaccaaattattcggtatggaaatgttaaaatga 377  Q
    |||||||||||||||||||| ||||||||||||||||    
T  10574630 agcaaccaaattattcggtaaggaaatgttaaaatga 10574666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 66 - 343
Target Start/End: Original strand, 31415861 - 31416137
Alignment:
Q  66 catgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaat 165  Q
    ||||||||| |||||||| ||||| |||||  ||||| | ||  |||| ||||||||| ||||||| | |||   ||||| ||||| |||||||||||||    
T  31415861 catgtccatgggtacccgcccaaatcaaccccgatttaacgggttttccccgatttgactgggtttaggtataagtttggattttctccgatttcaaaat 31415960  T
Q  166 acggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgagg 265  Q
    |||| ||||||| |||||||  ||||||||||||| ||||||||| || || |||||||||||  |||||||| | |||||| |||| ||||||||||||    
T  31415961 acgggtacgggatggataacagggatatatgtacccaccccgaacccacactcaaaccctacca-aatgtagaaaggtcatatttttatttttgttgagg 31416059  T
Q  266 aggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagc 343  Q
     |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  31416060 gggttgataatgatatgccatgttagttggtttgataattgtcatgatataagaactttcactgatagttaaaggagc 31416137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 156 - 389
Target Start/End: Original strand, 16216673 - 16216906
Alignment:
Q  156 atttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtt 255  Q
    |||||| |||||||||||| ||||| ||| |  ||||||||||||  |||| ||| | ||||||||||||||||||||||||| |||||||  |||||||    
T  16216673 atttcataatacggatacgagacgggtaatggagatatatgtaccttccccaaacccttacccaaaccctacccgaatgtagaaatgtcatgtttttgtt 16216772  T
Q  256 tttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattatt 355  Q
    |||||||||| |||||||||||||||| ||||||||||||||| |||||| ||||||||||  || ||| ||| || |||||||||||||||||||||||    
T  16216773 tttgttgagggggttgataatgatatgtcatgttatttggtttgataattatcatgatataaaaagtttaatttatggttaaaggagcaaccaaattatt 16216872  T
Q  356 cggtatggaaatgttaaaatgaacgcatattctt 389  Q
    ||||| | |||||||||||||| |||| ||||||    
T  16216873 cggtaagaaaatgttaaaatgagcgcaaattctt 16216906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 57 - 382
Target Start/End: Original strand, 15733447 - 15733764
Alignment:
Q  57 aacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccga 156  Q
    |||||| ||| || |||| | |||||| |||||||||||  |||||||| |  |||| ||||||| ||| ||||| | ||||||| || ||||||| |||    
T  15733447 aacaaaactcgtgcccatggatacccgcccaaaccaaccccgatttgataggttttccccgattttattaggtttgggtatggatatgagttttcctcga 15733546  T
Q  157 tttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgttt 256  Q
    ||||||||||||| |||| ||||| |||||  |||||||||||| ||||||||| | ||| ||||||||| | |||| |||| |||||||        ||    
T  15733547 tttcaaaatacgggtacgagacgggtaacggagatatatgtacccaccccgaactcgtactcaaaccctagctgaatatagaaatgtcat--------tt 15733638  T
Q  257 ttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattc 356  Q
    || || ||| |||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||    
T  15733639 ttttttagggggttgataatgatatgccatgttatttggtttgataattgtcatgatatgagaactttcattgatagttaaaggagcaaccgaattattc 15733738  T
Q  357 ggtatggaaatgttaaaatgaacgca 382  Q
    | || ||||  |||||||| ||||||    
T  15733739 gataaggaagggttaaaataaacgca 15733764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 141 - 392
Target Start/End: Complemental strand, 31782703 - 31782454
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    ||||||||||||||||||||||||||||| ||||| || | ||||| ||||||||||||| ||||| ||| |||||||||||| |||| ||||| ||| |    
T  31782703 tttgggttttccccgatttcaaaatacgggtacggtacaggtaacggggatatatgtacccaccccaaactcatacccaaaccttacctgaatgcagaaa 31782604  T
Q  241 tgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg 340  Q
     || ||| |||||||||| |  ||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||| |    
T  31782603 ggttatatttttgttttttt--agggggttgataatggtatgccatcttatttggtttgataattgtcatgatataagaactttcattgatagttaaaag 31782506  T
Q  341 agcaaccaaattattcggtatggaaatgttaaaatgaacgcatattcttcga 392  Q
    ||||||  ||||||||  || |||||||||||||||||| || ||| |||||    
T  31782505 agcaactgaattattcaataaggaaatgttaaaatgaacacagattgttcga 31782454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 188 - 382
Target Start/End: Complemental strand, 568460 - 568266
Alignment:
Q  188 ggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatg 287  Q
    ||||||||||||| ||||||||| |||||||||||| |||||||||||||| | |||||| ||||||||||||| ||| |||||||| ||||||| ||||    
T  568460 ggatatatgtacccaccccgaacccatacccaaaccttacccgaatgtagaaaggtcatatttttgtttttgttaagggggttgatagtgatatgtcatg 568361  T
Q  288 ttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||   |||||||||||||| ||||    
T  568360 ttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaaccgaattattcggtaacaaaatgttaaaatgagcgca 568266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 153 - 382
Target Start/End: Original strand, 30266347 - 30266577
Alignment:
Q  153 ccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataatttt 252  Q
    ||||||||| ||||||| ||| |||||| ||||| ||||||||||| | ||||||||| ||||||||||||||||| ||||||||| | ||| |  ||||    
T  30266347 ccgatttcataatacgggtacaggacgggtaacggggatatatgtatccaccccgaacccatacccaaaccctacctgaatgtagaaaggtcgtgttttt 30266446  T
Q  253 gtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg-agcaaccaaat 351  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| |||| | |||||||||| |||||||||||||| |||||||| ||||||| |||    
T  30266447 gtttttgttgagagggttgataatgatatgacatgttatttggtttgataactatcatgatataagaactttcattgatggttaaaggaagcaaccgaat 30266546  T
Q  352 tattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||| ||| |||||||||||||||| ||||    
T  30266547 tattcagtaaggaaatgttaaaatgagcgca 30266577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 153 - 382
Target Start/End: Complemental strand, 30285841 - 30285611
Alignment:
Q  153 ccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataatttt 252  Q
    ||||||||| ||||||| ||| |||||| ||||| ||||||||||| | ||||||||| ||||||||||||||||| ||||||||| | ||| |  ||||    
T  30285841 ccgatttcataatacgggtacaggacgggtaacggggatatatgtatccaccccgaacccatacccaaaccctacctgaatgtagaaaggtcgtgttttt 30285742  T
Q  253 gtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg-agcaaccaaat 351  Q
    ||||||||||||  |||||||||||||||| ||||||||||||||| |||| | |||||||||| |||||||||||||| |||||||| ||||||| |||    
T  30285741 gtttttgttgagagggttgataatgatatgacatgttatttggtttgataactatcatgatataagaactttcattgatggttaaaggaagcaaccgaat 30285642  T
Q  352 tattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||| ||| |||||||||||||||| ||||    
T  30285641 tattcagtaaggaaatgttaaaatgagcgca 30285611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 115 - 382
Target Start/End: Complemental strand, 47103854 - 47103582
Alignment:
Q  115 ccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacat 214  Q
    ||||||||| ||||||||  ||||| |||||||||||||| |||||||||||||| |||||| ||| ||||| ||||||||||||| ||||||||| |||    
T  47103854 ccgatttgactgggtttttgtatgggtttgggttttccccaatttcaaaatacgggtacggggcgggtaacgcggatatatgtacccaccccgaacccat 47103755  T
Q  215 acccaaaccctacccgaatgtagagatgtcataattttgtttttgt------tgaggaggttgataatgatatgccatgttatttggtttcataattgtc 308  Q
    |||||||||||||||||||||||  |   |||| |||| ||||| |      | |||| |||||||| ||||||  |||||||||||||| ||||||| |    
T  47103754 acccaaaccctacccgaatgtaggaagaccatattttttttttttttttttgtaagga-gttgataaagatatgttatgttatttggtttgataattggc 47103656  T
Q  309 atgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    |||||||| ||||||| ||||||||||||||||| |||  |||||||||||| |||||||||||||||||||||    
T  47103655 atgatataagaacttttattgatagttaaaggagaaactgaattattcggtaaggaaatgttaaaatgaacgca 47103582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 156 - 375
Target Start/End: Complemental strand, 18423665 - 18423446
Alignment:
Q  156 atttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtt 255  Q
    |||||| |||||||||||||||||| ||||||||||||||||||  | ||||||| |||||| |||||||||||||||||||| | |||||  |||||||    
T  18423665 atttcataatacggatacgggacgggtaacgaggatatatgtactcatcccgaacccatacctaaaccctacccgaatgtagaaaggtcatgtttttgtt 18423566  T
Q  256 tttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattatt 355  Q
    ||||||||||   |||||||||||||| ||||||||||||||| |||| | || |||||||  ||||||||||||||||||||||||||||  |||||||    
T  18423565 tttgttgagggaattgataatgatatgtcatgttatttggtttgataactatcttgatataaaaactttcattgatagttaaaggagcaactgaattatt 18423466  T
Q  356 cggtatggaaatgttaaaat 375  Q
     |||| ||||| ||||||||    
T  18423465 tggtaaggaaaagttaaaat 18423446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 141 - 360
Target Start/End: Complemental strand, 11173063 - 11172840
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatg----taccaaccccgaacacatacccaaaccctacccgaatgta 236  Q
    ||||||||||||||||||||||||||||| |||||||| | |||   || ||   |     ||| ||||||||| |||||||||||||| ||||||||||    
T  11173063 tttgggttttccccgatttcaaaatacgggtacgggacaggtaatacgggtacccgcccaaacccaccccgaacccatacccaaacccttcccgaatgta 11172964  T
Q  237 gagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagtta 336  Q
    || | |||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||    
T  11172963 gaaaggtcatattttagtttttgttaaggaggttgataatgatatgccatgttatttggtttgataattgtcatgatataagaactttcacggatagtta 11172864  T
Q  337 aaggagcaaccaaattattcggta 360  Q
    ||||||||||| ||||||||||||    
T  11172863 aaggagcaaccgaattattcggta 11172840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 177 - 377
Target Start/End: Complemental strand, 24637246 - 24637048
Alignment:
Q  177 acggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataat 276  Q
    |||| ||||| |||||||||| || |||| | || ||||||||||||||||| ||||||||| | |||||  |||||||||| || ||| ||||||||||    
T  24637246 acgggtaacggggatatatgtgcccacccaggacccatacccaaaccctacctgaatgtaga-aggtcatgtttttgtttttttt-agggggttgataat 24637149  T
Q  277 gatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatg 376  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||  |||||||||||| |||||||||||||||    
T  24637148 gatatgccatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaagaagcaactgaattattcggtaaggaaatgttaaaatg 24637049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 76 - 315
Target Start/End: Original strand, 1866489 - 1866727
Alignment:
Q  76 ggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgg 175  Q
    ||||| || |||||||||||  ||||||| ||| |||| ||||||||| | ||| | | ||||  | |||||||| |||||||||||||||||| ||||     
T  1866489 ggtactcgcccaaaccaaccccgatttgacggattttccccgatttgactaggtctgggtatgagtatgggtttttcccgatttcaaaatacgggtacga 1866588  T
Q  176 gacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataa 275  Q
    ||||| ||| | ||||||||||| | ||||||||| ||||||||||| ||||||||||||||| | |||||  ||||||||||||| ||| |||||||||    
T  1866589 gacgggtaatgcggatatatgtatccaccccgaacccatacccaaactctacccgaatgtagaaaggtcat-gttttgtttttgtttagggggttgataa 1866687  T
Q  276 tgatatgccatgttatttggtttcataattgtcatgatat 315  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  1866688 tgatatgtcatgttatttggtttgataattgtcatgatat 1866727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 113 - 293
Target Start/End: Original strand, 14605902 - 14606081
Alignment:
Q  113 ctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacac 212  Q
    ||||||||||| || |||| | ||||| ||||||||||| ||||||||||||||||| |||| ||||| ||||  ||||||||||||| ||||||||| |    
T  14605902 ctccgatttgactgagtttgggtatgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaaccc 14606001  T
Q  213 atacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttattt 293  Q
    |||||||||| ||||| ||||||||| |||||||| |||||||||| || |||  ||||||||||||||||||||||||||    
T  14606002 atacccaaactctacctgaatgtagaaatgtcatatttttgttttt-tttagggagttgataatgatatgccatgttattt 14606081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 302 - 382
Target Start/End: Original strand, 1866753 - 1866833
Alignment:
Q  302 aattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| ||||    
T  1866753 aattgtcatgatataagaactttcattgatagttaaaggagcaaccgaattattcggtaaggaaattttaaaatgagcgca 1866833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 98 - 219
Target Start/End: Complemental strand, 10302217 - 10302096
Alignment:
Q  98 gatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgt 197  Q
    ||||||||||  |||| ||| ||||||||||||| | ||||| ||| ||||||||||||||||||| ||||| || | ||||| ||||| || |||||||    
T  10302217 gatttgatgggttttccccgttttgattgggtttgggtatgggtttaggttttccccgatttcaaagtacgggtatgagacgggtaacggggttatatgt 10302118  T
Q  198 accaaccccgaacacataccca 219  Q
    ||| ||||||||| ||||||||    
T  10302117 acccaccccgaacccataccca 10302096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 224
Target Start/End: Original strand, 6481998 - 6482123
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| |||||| | ||||||||||||| | ||||| |||||||||||||| |||| |||| |||| || ||||||  ||| | | |||||||||    
T  6481998 atttgacggattttctctgttttgattgggtttgggtatgggtttgggttttccccaatttaaaaacacgggtatgggacgagtaaagggtatatatgta 6482097  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || ||||||||| |||||||||||||    
T  6482098 cccaccccgaacccatacccaaaccc 6482123  T

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Target: chr4; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 11028194 - 11028081
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||| ||||| ||| ||| | ||||| | ||||||||||||||| |||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||    
T  11028194 tttctccgttttgactggatttgggtatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaa 11028095  T
Q  210 cacatacccaaacc 223  Q
    | ||||||||||||    
T  11028094 ctcatacccaaacc 11028081  T

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Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 31752568 - 31752463
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||| |||| || | ||||  ||||||| ||||| || || ||||||||| |||||||    
T  31752568 tttgattgggtttggatatgggtatgggttttccccgatttcaaaacacgggtatgagacgagtaacgagtatataggttcccaccccgaacccataccc 31752469  T
Q  219 aaaccc 224  Q
    | ||||    
T  31752468 ataccc 31752463  T

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Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 44317667 - 44317542
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| |||| ||| ||||| ||||||| | ||||| | ||||||||||||||| || ||| |||| || ||||||| ||||| | ||||| |||    
T  44317667 atttgacggattttccccgttttgactgggtttgggtatgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggta 44317568  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || ||||||||| |||||||||||||    
T  44317567 cccaccccgaacccatacccaaaccc 44317542  T

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Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 1724309 - 1724408
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatg 234  Q
    ||||| |||||||||||||||||||||||| | || || ||||||| |||||   ||||| ||||| ||||||||| |||||||||||||  ||||||||    
T  1724309 tatgggtttgggttttccccgatttcaaaacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaacccgtcccgaatg 1724408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 6382246 - 6382360
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||| ||||| |||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||    
T  6382246 tttccccgctttgactgggtttgggtatgggtatgggttttctccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaa 6382345  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  6382346 cccatacccaaaccc 6382360  T

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Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 15132183 - 15132260
Alignment:
Q  188 ggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgagg 265  Q
    |||||||||| || |||| |||| |||||  ||||||||||| |||||||| |||||||| |||||||||||||||||    
T  15132183 ggatatatgtgcccaccctgaacccatacataaaccctacccaaatgtagaaatgtcatatttttgtttttgttgagg 15132260  T

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Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 19883039 - 19883156
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    |||||||||||||   ||||  ||||||||||||||||||| |||| |||||||||||| || ||||| ||||||| ||| | |||||||||  |||| |    
T  19883039 tttgattgggtttgagtatgagtttgggttttccccgattttaaaacacggatacgggaagggtaacggggatataggtatccaccccgaaccgatacac 19883138  T
Q  219 aaaccctacccgaatgta 236  Q
    |||| |  ||||||||||    
T  19883139 aaactcgtcccgaatgta 19883156  T

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Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 7334180 - 7334254
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatata 194  Q
    ||||| ||||||| | ||||||||||| |||||||||||||||||| |||| |||||||||||||| | |||||||    
T  7334180 tttgactgggtttgggtatggatttggattttccccgatttcaaaacacgg-tacgggacggataatggggatata 7334254  T

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Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 7609091 - 7608977
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||| ||| | ||||| | ||||||||||||||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||    
T  7609091 tttccccgttttgactggatttgggtatgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaa 7608992  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  7608991 cccatacccaaaccc 7608977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 224
Target Start/End: Complemental strand, 50684556 - 50684474
Alignment:
Q  142 ttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||| ||||||||| |||||||||||||||||||| |||||  ||||||  |||| | || |||| |||||||||||||    
T  50684556 ttgggtttaccccgattttaaaatacggatacgggacgggtaacggagatatagatacccatccggaactcatacccaaaccc 50684474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 5902621 - 5902702
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  5902621 tgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 5902702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 25941228 - 25941147
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    |||||||||| ||||||||||||| |||| |||||||| | ||||| | | ||| ||||| ||||||||| |||||||||||    
T  25941228 tttgggtttttcccgatttcaaaacacgggtacgggacaggtaacgggaagataggtacccaccccgaacccatacccaaac 25941147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 26564963 - 26564838
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| ||||| || ||||| ||||||| | ||||  |||| | |||||||||||||||||  ||| || ||||||| ||||| | ||||| |||    
T  26564963 atttgacggattttcttcgttttgactgggtttgggtatgagtttgagctttccccgatttcaaaacgcgggtatgggacgggtaacgggtatataggta 26564864  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || ||||||||  |||||||||||||    
T  26564863 cccaccccgaaaccatacccaaaccc 26564838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 14606091 - 14606147
Alignment:
Q  319 aactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaat 375  Q
    ||||||||| ||||||||||||||||||| |||||||||||| | ||||| ||||||    
T  14606091 aactttcatcgatagttaaaggagcaaccgaattattcggtaagaaaatgataaaat 14606147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 42907971 - 42907879
Alignment:
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
    |||||| |||| ||||||| ||||||||||||||  ||| | ||||||| ||||| ||||||| | ||||||||||| |  ||||||||||||    
T  42907971 gttttctccgaattcaaaacacggatacgggacgagtaatggggatataggtacccaccccgagcccatacccaaactcgtcccgaatgtaga 42907879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 85 - 200
Target Start/End: Complemental strand, 39086303 - 39086188
Alignment:
Q  85 ccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataa 184  Q
    ||||||||| ||  |||||| ||| |||||||| ||||||||||||| ||||||  |||| |||||| ||||||||| || | || | ||| |||| |||    
T  39086303 ccaaaccaaactcaatttgacggattttctccgttttgattgggtttggatatgagtttgagttttctccgatttcacaacatgggtgcggtacgggtaa 39086204  T
Q  185 cgaggatatatgtacc 200  Q
    || ||||||| |||||    
T  39086203 cggggatataggtacc 39086188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 12825466 - 12825548
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaacc 223  Q
    |||||||||||||||||||||||| |||| || ||||||| |||||   ||||| ||||| |||| ||||  |||||||||||    
T  12825466 tttgggttttccccgatttcaaaacacgggtatgggacgggtaacggatatatacgtacccaccctgaacctatacccaaacc 12825548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 15987236 - 15987350
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||  ||||||||||||| | ||||| | || |||||||| ||||| |||| |||| || |||| || ||||| | |||||  |||| ||||||||    
T  15987236 tttctccattttgattgggtttgggtatgggtatgagttttcccagattttaaaacacgggtatgggatgggtaacgggtatatagatacccaccccgaa 15987335  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  15987336 cccatacccaaaccc 15987350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Original strand, 47550363 - 47550441
Alignment:
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||||||| |||||| |||| || ||||||| ||||  | ||||| ||||| ||||||||| |||||||||||||    
T  47550363 gttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaaccc 47550441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 16575202 - 16575121
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    ||||||| |||| |||||| ||||  ||| ||||||| |||||||||||||||| ||||| || ||||||  ||||||||||    
T  16575202 tttgggtattcctcgattttaaaacgcgggtacgggatggataacgaggatataagtacccactccgaacctatacccaaac 16575121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 48459577 - 48459488
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||| |||||||||||||||||||||| | || || || |||| ||||  | ||||| ||||| ||||||||| |||||||| ||||    
T  48459577 tatggatatgggttttccccgatttcaaaacatgggtatggaacgggtaacaggtatataggtacccaccccgaacccatacccataccc 48459488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 55826606 - 55826711
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| ||||||  | ||||||||||||||| || ||| || | || ||||||| ||||| | ||||| ||||| ||||||||| |||| ||    
T  55826606 tttgactgggtttggatatgagtatgggttttccccgatctcgaaacacaggtatgggacgggtaacgggtatataggtacccaccccgaacccatatcc 55826705  T
Q  219 aaaccc 224  Q
    ||||||    
T  55826706 aaaccc 55826711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 425801 - 425726
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||||||||||||| |||| |||||||||||| ||||  ||||  |||||||| ||||| || |||| ||||    
T  425801 tgatatgccatgttattttgtttgataattgtcatgttataaaaactaccattgatatttaaaagaacaactaaat 425726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 6482153 - 6482228
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||||||||||||| |||| ||||||||| || ||||  ||||  |||||||| ||||||||| ||| ||||    
T  6482153 tgatatgccatgttattttgtttgataattgtcgtgttataaaaactaacattgatatttaaaggagaaactaaat 6482228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 359
Target Start/End: Original strand, 28695259 - 28695342
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggt 359  Q
    |||||||| |||||||||  ||| |||||||||| | ||||  |||| ||||| ||| ||||||||||||| |||| |||||||    
T  28695259 tgatatgcaatgttattttatttgataattgtcacgttataaaaactatcattaatatttaaaggagcaactaaatcattcggt 28695342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 197
Target Start/End: Complemental strand, 43309604 - 43309517
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgt 197  Q
    |||||||| ||||| |||||||   ||||  |||||||||| ||||||||||||| |||| || ||||||| ||||| || |||||||    
T  43309604 tttctccgctttgactgggtttgagtatgagtttgggtttttcccgatttcaaaacacgggtatgggacgggtaacggggttatatgt 43309517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 32596192 - 32596270
Alignment:
Q  144 gggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    ||||||||||||||||||||| |||| || ||||||| ||||| | ||||| || || ||| | ||| |||||||||||    
T  32596192 gggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtccccacctcaaactcatacccaaac 32596270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 4741199 - 4741296
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    ||||| || |||| ||||||  |||| ||||||| |||||| |||| | || || ||||||||||||  ||||||| ||||| ||||||||| |||||    
T  4741199 tttgactgagtttggatatgagtttgagttttcctcgattttaaaacatgggtatgggacggataacagggatataagtacccaccccgaacccatac 4741296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 19548920 - 19548981
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacgg 180  Q
    ||||| ||||||| | |||||||  ||||||||||||||||||||| || | ||||||||||    
T  19548920 tttgactgggtttgggtatggataagggttttccccgatttcaaaacacaggtacgggacgg 19548981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 32585573 - 32585496
Alignment:
Q  147 ttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||| |||||||||||| |||| || ||||| | ||||| | ||||| ||||| |||| |||| |||||||||||||    
T  32585573 ttttctccgatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccctgaacccatacccaaaccc 32585496  T

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Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 39375390 - 39375285
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| || |||| ||||||  ||||| ||||||||||||||||||||||| ||  |||||| ||||| | |||||  || | ||||| | ||||||| |    
T  39375390 tttgactgagtttggatatgagtttggcttttccccgatttcaaaatacgggtataggacgggtaacgggtatatagatatccaccccaatcacatactc 39375291  T
Q  219 aaaccc 224  Q
    ||||||    
T  39375290 aaaccc 39375285  T

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Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 12505514 - 12505574
Alignment:
Q  110 tttctccgatttgattgggttttga-tatggatttgggttttccccgatttcaaaatacgg 169  Q
    |||||||| ||||||||||||| |  ||||  |||||||||||||||||||||||| ||||    
T  12505514 tttctccgctttgattgggtttagggtatgagtttgggttttccccgatttcaaaacacgg 12505574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 141 - 169
Target Start/End: Complemental strand, 24637271 - 24637243
Alignment:
Q  141 tttgggttttccccgatttcaaaatacgg 169  Q
    |||||||||||||||||||||||||||||    
T  24637271 tttgggttttccccgatttcaaaatacgg 24637243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 29035531 - 29035611
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacata 215  Q
    ||||| |||||| ||||| | |||| |||| || | |||||||||||||| || |||||| ||||||||| ||||| ||||    
T  29035531 tatgggtttgggctttcctcaattttaaaacaccggtacgggacggataatgaagatataagtaccaacctcgaactcata 29035611  T

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Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 215
Target Start/End: Original strand, 29047664 - 29047744
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacata 215  Q
    ||||| |||||| ||||| | |||| |||| || | |||||||||||||| || |||||| ||||||||| ||||| ||||    
T  29047664 tatgggtttgggctttcctcaattttaaaacaccggtacgggacggataatgaagatataagtaccaacctcgaactcata 29047744  T

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Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 33916242 - 33916166
Alignment:
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    |||||||| |||||||||  ||||||||| |||||||||   ||||||| ||||| ||||  ||| |||||||||||    
T  33916242 gttttcccggatttcaaatcacggatacgagacggataatagggatataagtacctacccaaaactcatacccaaac 33916166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 47239502 - 47239578
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgat-ataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    ||||||| |||||||||| |||| |||||||||||| | |||  |||| ||||||||| |||||||| |||| ||||    
T  47239502 tgatatgtcatgttattttgtttgataattgtcatgttaataaaaactatcattgatatttaaaggatcaactaaat 47239578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 168; Significance: 6e-90; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 135 - 378
Target Start/End: Complemental strand, 32546287 - 32546044
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatg 234  Q
    ||||| ||||| |||| |||||||||||||||||| ||||| |||| ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  32546287 tatgggtttggatttttcccgatttcaaaatacgggtacggaacgggtaacggggatatatgtacccaccccgaacccatacccaaaccctacccgaatg 32546188  T
Q  235 tagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagt 334  Q
    |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||||    
T  32546187 tagaaatgtcatatttttgtttttgttgagggggttgataatgatatgccatgttatttggtttattaattgtcatgatataagaacttttattgatagt 32546088  T
Q  335 taaaggagcaaccaaattattcggtatggaaatgttaaaatgaa 378  Q
    ||||||||||||| ||||||||| || |||||||||||||||||    
T  32546087 taaaggagcaaccgaattattcgttaaggaaatgttaaaatgaa 32546044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 47 - 377
Target Start/End: Complemental strand, 31426192 - 31425862
Alignment:
Q  47 taggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctc-cgatttgattgggttttgatatggatttgg 145  Q
    |||| |||| |||||| | | ||| |||||||| |||||||||||||||| ||||||| ||  ||| |  | |||||| ||||||||| ||| | |||||    
T  31426192 taggcatggcaacaaaacccgtgttcataggtatccgtccaaaccaacctcgatttgacgggttttttttcaatttgactgggttttggtattggtttgg 31426093  T
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtca 245  Q
    |||||||||||||| ||||||||| || | ||||| ||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||||| | ||||    
T  31426092 gttttccccgatttaaaaatacgggtatgagacgggtaacggggatatatgtatccaccccgaacgcatacccaaaccctacccgaatgtagaaaggtca 31425993  T
Q  246 taattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaa 345  Q
    |  ||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||  |||||||| |||||    
T  31425992 tgtttttgtttttgttgagggggttgataatgatatgtcatgttatttggtttgataattgtcatgatataagaactttcattg-cagttaaagaagcaa 31425894  T
Q  346 ccaaattattcggtatggaaatgttaaaatga 377  Q
    || ||||||||| || ||||||||||||||||    
T  31425893 ccgaattattcgataaggaaatgttaaaatga 31425862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 111 - 378
Target Start/End: Original strand, 37103101 - 37103368
Alignment:
Q  111 ttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaac 210  Q
    ||||||||||||||||||||| |||||   |||| ||||| || ||||||||||||||| ||||||| || ||||||||||||||| ||| | |||||||    
T  37103101 ttctccgatttgattgggtttggatataagtttgtgtttttcctgatttcaaaatacgggtacgggaagggtaacgaggatatatgcacccatcccgaac 37103200  T
Q  211 acatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcat 310  Q
    ||||| |||||||||||||||||||||| | |||||  ||||||||||||||| |  ||||||||||||||||||||||||||||||| |||||||||||    
T  37103201 acatatccaaaccctacccgaatgtagaaaggtcatgtttttgtttttgttgacggagttgataatgatatgccatgttatttggtttgataattgtcat 37103300  T
Q  311 gatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaa 378  Q
    ||||||  |||||||||||||| |||||||||||||| ||| |||||||| |||||||||||||||||    
T  37103301 gatataataactttcattgataattaaaggagcaaccgaataattcggtaaggaaatgttaaaatgaa 37103368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 115 - 382
Target Start/End: Complemental strand, 18684089 - 18683822
Alignment:
Q  115 ccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacat 214  Q
    ||||||||| | ||||| | ||||| || |||||||||||||||||||||||||| |||||||||| ||||  ||||||||||| | ||| ||||| |||    
T  18684089 ccgatttgactaggtttgggtatgggttcgggttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatccacctcgaacccat 18683990  T
Q  215 acccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgata 314  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  18683989 acccaaaccctacccgaatgtagataggtcatatttttgtttttgtttagggggttgataatgatatgccatgttatttggtttgataattgtcatgata 18683890  T
Q  315 taggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    || ||| ||||||||||||||||| || ||||   |||||||| || |||||||||||||||| ||||    
T  18683889 taagaattttcattgatagttaaatgatcaactggattattcgataaggaaatgttaaaatgagcgca 18683822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 68 - 377
Target Start/End: Original strand, 30839064 - 30839374
Alignment:
Q  68 tgtccataggtacccgtccaaaccaaccttgatttgatggactttct-ccgatttgattgggttttgatatggatttgggttttccccgatttcaaaata 166  Q
    |||||||  |||||||  ||||||||||  ||||||| ||  ||||| ||||||||| ||||||| | ||||  |||| |||||||| ||||||||||||    
T  30839064 tgtccatgagtacccgctcaaaccaaccccgatttgacgggttttcttccgatttgactgggtttgggtatgagtttgagttttccctgatttcaaaata 30839163  T
Q  167 cggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgagga 266  Q
    ||| || ||||||  ||||| ||||||||||| | ||||||||| ||| |||||||| |||||||||||||| | |||||| ||||||||||||| |||     
T  30839164 cgggtatgggacgagtaacgtggatatatgtatctaccccgaactcatgcccaaaccttacccgaatgtagaaaggtcatatttttgtttttgtttaggt 30839263  T
Q  267 ggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaa 366  Q
    ||||||||||||||||||| ||||| |||||| |||| | |||||||||| |||||||||||||||||||||||| ||||||||||||||| || |||||    
T  30839264 ggttgataatgatatgccaagttatgtggtttgataactatcatgatataagaactttcattgatagttaaaggatcaaccaaattattcgataaggaaa 30839363  T
Q  367 tgttaaaatga 377  Q
    |||||||||||    
T  30839364 tgttaaaatga 30839374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 45 - 382
Target Start/End: Original strand, 42907947 - 42908275
Alignment:
Q  45 agtaggtatggtaacaaagctcatgtccataggtaccc--gtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatt 142  Q
    |||||| |||| || ||| | ||||||||| |||||||  | |||||||||||| ||||||| ||  |||  || |||||||||||||| | ||||  ||    
T  42907947 agtaggcatggcaataaaacccatgtccatgggtacccccgcccaaaccaacctcgatttgacggttttttcccaatttgattgggtttgggtatgagtt 42908046  T
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatg 242  Q
    ||||||||||||||||||||||||||| |||||||||| ||| | |||||||||||||           ||||||||||||||||||||||||||| | |    
T  42908047 tgggttttccccgatttcaaaatacgggtacgggacgggtaatggggatatatgtacc-----------catacccaaaccctacccgaatgtagaaagg 42908135  T
Q  243 tcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggag 342  Q
    || || ||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||| |||||    
T  42908136 tcgtatttttgtttttgttaagggggttgataatgatatgccatgttatttggtttgataattgtcatgatataagaactttcacggatagttataggag 42908235  T
Q  343 caaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||| ||||||||||||   |||||||||||||| ||||    
T  42908236 caaccgaattattcggtaacaaaatgttaaaatgagcgca 42908275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 141 - 382
Target Start/End: Complemental strand, 28309581 - 28309341
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    |||||||| |||| ||||||||||||||| |||||||||| ||||| | ||||||||| | ||||||||| ||||||||||||||||||||||||||| |    
T  28309581 tttgggttctccctgatttcaaaatacgggtacgggacgggtaacgggaatatatgtatctaccccgaactcatacccaaaccctacccgaatgtagaaa 28309482  T
Q  241 tgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg 340  Q
    ||||||  |||||||||| |||||| |||||||||||||||| |||||||||| |||| ||||||||||||||||| |||| ||||||||||||| ||||    
T  28309481 tgtcatgtttttgtttttattgagg-ggttgataatgatatgtcatgttatttagtttgataattgtcatgatataagaacattcattgatagttgaagg 28309383  T
Q  341 agcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    |||||||||||| || | || |||||||||||||||| ||||    
T  28309382 agcaaccaaattttttgataaggaaatgttaaaatgagcgca 28309341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 57 - 380
Target Start/End: Complemental strand, 27063311 - 27062993
Alignment:
Q  57 aacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccga 156  Q
    |||||| ||| || |||| |||||||  |||||||||||  ||||||| ||| |||| | ||||||| ||||||| | ||||  |||| ||||||| |||    
T  27063311 aacaaaactcgtgcccatgggtaccctcccaaaccaaccccgatttgacggattttccctgatttgactgggtttgggtatgagtttgagttttcctcga 27063212  T
Q  157 tttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgttt 256  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||  ||||||||| ||||||||||||||||||||||||||| | |||||| ||||||||    
T  27063211 tttcaaaatacgggtacaggacggataacggggatatatgtactcaccccgaactcatacccaaaccctacccgaatgtagaaaagtcatatttttgttt 27063112  T
Q  257 ttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattc 356  Q
    |  || ||| |||||||||||||||  ||| ||||||||||| |||||| ||   ||||| |||||||||||||||||||||| | ||||  ||||||||    
T  27063111 t--tttagggggttgataatgatatctcatcttatttggtttgataattctc---atataagaactttcattgatagttaaagcaacaactgaattattc 27063017  T
Q  357 ggtatggaaatgttaaaatgaacg 380  Q
     ||| |||||||||||||||||||    
T  27063016 agtaaggaaatgttaaaatgaacg 27062993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 115 - 382
Target Start/End: Original strand, 29014930 - 29015203
Alignment:
Q  115 ccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtac------caaccccga 208  Q
    ||||||||||||||||| | ||||  |||| ||||| |||||||||||||||||| ||||||||||||| || |||||||| ||       | |||||||    
T  29014930 ccgatttgattgggtttaggtatgagtttgagtttttcccgatttcaaaatacgggtacgggacggatagcggggatatatatatatatatccaccccga 29015029  T
Q  209 acacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtc 308  Q
    || ||||| |||||||||||||| |||||| | |||||| ||||||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||||    
T  29015030 acccatactcaaaccctacccgactgtagaaaggtcatatttttgtttttgttgagggggttgataattatatggcatgttatttggtttgataattgtc 29015129  T
Q  309 atgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||||  |||||| |||||||||||||||||||| | |||||||||||| | |||||||||||||| ||||    
T  29015130 atgatataaaaacttttattgatagttaaaggagcaatcgaattattcggtaagaaaatgttaaaatgagcgca 29015203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 76 - 382
Target Start/End: Complemental strand, 29157505 - 29157197
Alignment:
Q  76 ggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaata--cggatac 173  Q
    |||||||||||||||||||   ||||||| ||  |||| || ||||||  |||||| | ||||| ||||| ||||||||||||||| ||||  ||| ||     
T  29157505 ggtacccgtccaaaccaactccgatttgacgggttttcaccaatttgacagggtttgggtatggttttggattttccccgatttcataatatacgggtat 29157406  T
Q  174 gggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgat 273  Q
    | ||||| ||||| ||||||||||| | ||||  ||| | ||||||||||||||||| ||||||| | |||||  ||||||||||||||||| ||||| |    
T  29157405 gagacgggtaacggggatatatgtatccaccctaaacccgtacccaaaccctacccggatgtagaaaggtcatgtttttgtttttgttgagggggttggt 29157306  T
Q  274 aatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaa 373  Q
    ||| ||||| ||||||||||||||| |||| | |||||||||| |||||||||||||| | ||||||||||||| |||||||||||| | ||||||||||    
T  29157305 aataatatgtcatgttatttggtttgataactatcatgatataagaactttcattgatggctaaaggagcaaccgaattattcggtaagaaaatgttaaa 29157206  T
Q  374 atgaacgca 382  Q
    || ||||||    
T  29157205 atcaacgca 29157197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 145 - 379
Target Start/End: Complemental strand, 21750867 - 21750637
Alignment:
Q  145 ggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtc 244  Q
    |||||| ||||||||||||||||||||| | ||||| | ||| ||||||||||||| ||| ||||| |||||||||||||||| ||||| |||| | |||    
T  21750867 ggtttttcccgatttcaaaatacggatatgagacgggtgacggggatatatgtacccacctcgaactcatacccaaaccctactcgaatctagaaaggtc 21750768  T
Q  245 ataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagca 344  Q
    ||    || ||||| |||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || ||    
T  21750767 at----tttttttttttgagggggttgataatgatatgtcatgttatttggtttgataattgtcatgatatatgaactttcattgatagttaaaagacca 21750672  T
Q  345 accaaattattcggtatggaaatgttaaaatgaac 379  Q
    || ||||||||  ||| | ||||||||||||||||    
T  21750671 actaaattatttagtaagaaaatgttaaaatgaac 21750637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 115 - 382
Target Start/End: Complemental strand, 43218398 - 43218131
Alignment:
Q  115 ccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacat 214  Q
    ||||||||| ||||||| | ||||| |||||||||||||| |||||| ||||  | | |||||||| |||||  |||||||||||  ||||||||| |||    
T  43218398 ccgatttgactgggtttgggtatgggtttgggttttccccaatttcataatataggtgcgggacgggtaacggcgatatatgtactcaccccgaactcat 43218299  T
Q  215 acccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgata 314  Q
    |||||||||||| || |||||| | | ||| |  |||||||||||||||||  ||||||||||||||| ||||||||||||||| |||| | |||| |||    
T  43218298 acccaaaccctagccaaatgtaaaaaggtcgtgtttttgtttttgttgagggagttgataatgatatgacatgttatttggtttgataactatcataata 43218199  T
Q  315 taggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    || |||||||||||||| ||||||||||||||| ||||||||| || | |||| ||||||||| ||||    
T  43218198 taagaactttcattgatggttaaaggagcaaccgaattattcgataagaaaattttaaaatgagcgca 43218131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 115 - 276
Target Start/End: Complemental strand, 22973503 - 22973342
Alignment:
Q  115 ccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacat 214  Q
    ||||||||| ||||||| | ||||| |||||||||||| |||||||||||||||| |||||||||| ||| | |||||| |||||| ||| ||||| |||    
T  22973503 ccgatttgactgggtttgggtatgggtttgggttttccacgatttcaaaatacgggtacgggacgggtaatggggatatctgtacccacctcgaacccat 22973404  T
Q  215 acccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataat 276  Q
    ||||||||||||| |||||||||| |||||||| ||||||||||||| ||||||||||||||    
T  22973403 acccaaaccctactcgaatgtagaaatgtcatatttttgtttttgttaaggaggttgataat 22973342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 249 - 389
Target Start/End: Original strand, 27062376 - 27062516
Alignment:
Q  249 ttttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaacca 348  Q
    ||||||||||||||||| | |||||||||||||  ||||||||||||||| |||||| | |||||||| ||| |||||||||| ||||||||||||||||    
T  27062376 ttttgtttttgttgaggggattgataatgatatatcatgttatttggtttgataattattatgatataagaattttcattgatggttaaaggagcaacca 27062475  T
Q  349 aattattcggtatggaaatgttaaaatgaacgcatattctt 389  Q
    |||||||||||| |||||||||||||||| |||| ||||||    
T  27062476 aattattcggtaaggaaatgttaaaatgagcgcaaattctt 27062516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 114 - 281
Target Start/End: Original strand, 44845112 - 44845278
Alignment:
Q  114 tccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacaca 213  Q
    |||| ||||| || |||||| ||||| ||||||||||||||||||||| ||||||| |||||||||| ||| |||||||||| |||| ||||||||| ||    
T  44845112 tccgttttgactgagttttggtatgggtttgggttttccccgatttcataatacgggtacgggacggttaatgaggatatatttacccaccccgaaccca 44845211  T
Q  214 tacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatat 281  Q
    ||| |||||||| |||||||||||| | |||||  ||||||||||||||||| ||| |||||||||||    
T  44845212 tacacaaaccctgcccgaatgtagaaaggtcatgcttttgtttttgttgagg-ggtcgataatgatat 44845278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 206 - 389
Target Start/End: Complemental strand, 2472019 - 2471836
Alignment:
Q  206 cgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataatt 305  Q
    ||||| ||||||||||||||||||||||||||| | ||  |  | || |||||||||||| ||||||||||||| |  ||||||||||||||| |||| |    
T  2472019 cgaacccatacccaaaccctacccgaatgtagaaaggtggtgttcttatttttgttgagggggttgataatgatgtatcatgttatttggtttgataact 2471920  T
Q  306 gtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgcatattctt 389  Q
     |||||||||| ||||| |||||||| ||||||||||||||||||||||  | |||| | |||||||||| | |||| ||||||    
T  2471919 atcatgatataagaactctcattgatggttaaaggagcaaccaaattatctgatatgaagatgttaaaataagcgcaaattctt 2471836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 22962526 - 22962412
Alignment:
Q  268 gttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaat 367  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||  ||||||||||||| ||||| ||||||||||||   ||||    
T  22962526 gttgataatgatatgccatgttatttgatttgataattgtcatgatataagaactttcacggatagttaaaggatcaaccgaattattcggtaacaaaat 22962427  T
Q  368 gttaaaatgaacgca 382  Q
     ||||||||| ||||    
T  22962426 tttaaaatgagcgca 22962412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 27063479 - 27063326
Alignment:
Q  85 ccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataa 184  Q
    |||||||||||  ||||||| ||| |||  || |||||| ||||||| | ||||| | | ||||||||||||||| | ||||||| |||||||||| |||    
T  27063479 ccaaaccaaccccgatttgacggatttttcccaatttgactgggtttgggtatgggtctcggttttccccgatttaataatacgggtacgggacgggtaa 27063380  T
Q  185 cgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
    || | ||||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  27063379 cgggaatatatgtacccaccccgaactcataccccaaccctacccgaatgtaga 27063326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 284 - 389
Target Start/End: Original strand, 44845321 - 44845426
Alignment:
Q  284 catgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgcat 383  Q
    ||||||||||||||| |||| | | |||||||| |||||||||| ||| ||||| | | |||||||||||||||||| |||||||||||||||| ||||     
T  44845321 catgttatttggtttgataactattatgatataagaactttcatcgatggttaacgaaacaaccaaattattcggtaaggaaatgttaaaatgagcgcaa 44845420  T
Q  384 attctt 389  Q
    ||||||    
T  44845421 attctt 44845426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 99 - 224
Target Start/End: Original strand, 38139754 - 38139879
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||||||| |||| ||| ||||| ||||||| ||||||| | |||||||||||| ||||||||| |||  || ||||||| ||| ||| ||||| |||    
T  38139754 atttgatggattttccccgttttgactgggtttggatatgggtatgggttttccccaatttcaaaacacgagtatgggacgggtaatgagtatataagta 38139853  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || ||||||||| |||| ||||||||    
T  38139854 cccaccccgaacccataaccaaaccc 38139879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 45380218 - 45380115
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| ||||||| | |||||||| |||||||||||||||||| || ||||||| ||||| | ||||| ||||| ||||||||| ||||||     
T  45380218 tttgactgggtttggatatgggtatgggtttttcccgatttcaaaatacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacct 45380119  T
Q  219 aaac 222  Q
    ||||    
T  45380118 aaac 45380115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 3157203 - 3157089
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| | ||||| | ||||| ||| |||||||||||||||||||||| || || ||||||||||||| ||||||| ||||| || |||||    
T  3157203 tttccccgctttgacttggtttgggtatgggtttaggttttccccgatttcaaaatatgggtatgggacggataacggggatataggtacccacaccgaa 3157104  T
Q  210 cacatacccaaaccc 224  Q
    |  ||||||||||||    
T  3157103 cctatacccaaaccc 3157089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 7780160 - 7780014
Alignment:
Q  78 tacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacggga 177  Q
    ||||| ||| |||||| ||  |||||| ||| |||| ||| ||||| ||||||| | ||||| | ||||||||||||||| |||||| |||| || ||||    
T  7780160 tacccatccgaaccaaactcaatttgacggattttccccgttttgactgggtttgggtatgggtatgggttttccccgatctcaaaacacgggtatggga 7780061  T
Q  178 cggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||| | | ||||| ||||| |||||||||  ||||||||||||    
T  7780060 cggataatgggtatataggtacccaccccgaacctatacccaaaccc 7780014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 27896457 - 27896571
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||||||||||| | ||||| |||||||||||||  ||||||||| | || || ||||||| ||||| || |||||| ||||||||||||| |||||||    
T  27896457 tttgattgggtttgggtatgggtttgggttttcccttatttcaaaacatgggtatgggacgggtaacggggttatatgcaccaaccccgaactcataccc 27896556  T
Q  219 aaaccctacccgaat 233  Q
    | ||||  |||||||    
T  27896557 atacccgtcccgaat 27896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 12980488 - 12980383
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| ||| |||||||||||||||||||| |||| || ||||||| ||| | | ||||| ||||| ||||||||| |||||||    
T  12980488 tttgactgggtttgggtatgggttttggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataagtacccaccccgaacccataccc 12980389  T
Q  219 aaaccc 224  Q
    ||||||    
T  12980388 aaaccc 12980383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 5565241 - 5565389
Alignment:
Q  71 ccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgga 170  Q
    |||| |||||||| ||| ||| |||  ||||||| ||| |||| ||| ||||| ||| ||| | ||| | ||||||||||||| ||||||||| ||||||    
T  5565241 ccatgggtacccgcccatacccaccccgatttgacggattttccccgctttgactggatttggttataggtttgggttttccctgatttcaaagtacgga 5565340  T
Q  171 tacgggacggataacgaggatatatgtaccaaccccgaacacataccca 219  Q
    || |||| || ||||| || |||||||||| ||||| ||| ||||||||    
T  5565341 tatgggatgggtaacggggttatatgtacccacccctaacccataccca 5565389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 18825876 - 18825959
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||||||||||||||||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| | |||||||||||    
T  18825876 tttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtacccaaaccc 18825959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 143 - 238
Target Start/End: Original strand, 27850332 - 27850427
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
    |||||||||||||||||||||| |||| || ||||||| ||||| |  |||| ||||| | ||||||| |||||||||||||  ||||||||||||    
T  27850332 tgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtgtataggtacccatcccgaacccatacccaaacccgtcccgaatgtaga 27850427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 16866289 - 16866175
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||||||||| |||||| |||| || ||||||  ||||| | ||||| ||||| ||||||||    
T  16866289 tttccccgttttgactgggtttggttatgggtatgggttttccccgatctcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaa 16866190  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  16866189 cccatacccaaaccc 16866175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Complemental strand, 3920627 - 3920530
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
    |||||||||||||||||||||||| || | || ||||||||||||  | ||||| ||||| ||||||||| |||||||||| |   ||||||||||||    
T  3920627 tttgggttttccccgatttcaaaacactggtatgggacggataacaggtatataggtacccaccccgaacccatacccaaaactgtcccgaatgtaga 3920530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 8906522 - 8906667
Alignment:
Q  70 tccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgg 169  Q
    ||||| |||||||| ||||||| ||   ||||||| ||  |||||||| ||||||||| ||| | ||||| |||| |||||| |||||||||||| |||     
T  8906522 tccatgggtacccgcccaaacccactccgatttgacgggttttctccgctttgattggatttgggtatgggtttgagttttctccgatttcaaaacacga 8906621  T
Q  170 atacgggacggataacgaggatatatgtaccaaccccgaacacata 215  Q
     || | |||| |||||| || |||||||||| ||||||||| ||||    
T  8906622 gtatgagacgaataacggggttatatgtacccaccccgaacccata 8906667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 219
Target Start/End: Complemental strand, 10072586 - 10072477
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | |||||||||||||||||||||| |||| || || |||| ||||| | ||||| ||||| ||||||||    
T  10072586 tttccccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaacacgggtatggaacgggtaacgggtatataggtacccaccccgaa 10072487  T
Q  210 cacataccca 219  Q
    | ||||||||    
T  10072486 cccataccca 10072477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 351
Target Start/End: Original strand, 27850441 - 27850517
Alignment:
Q  275 atgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||| |||||||||| |||| ||||||||| || ||||  |||||||||||||| ||||||||||||| ||||    
T  27850441 atgatatgtcatgttattttgtttgataattgtcgtgttataaaaactttcattgatatttaaaggagcaactaaat 27850517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 39455988 - 39456088
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||||| |||||||||||||||||||||| | || || ||||||| ||||| | ||||| ||||| ||||||||    
T  39455988 tttccccgttttgactgggtttgggtatggatatgggttttccccgatttcaaaacatgggtatgggacgggtaacgggtatataggtacccaccccgaa 39456087  T
Q  210 c 210  Q
    |    
T  39456088 c 39456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 45885738 - 45885845
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||| ||||| ||||||| | ||||| | || |||||||||||| |||||| |||| || ||||||| |||| || ||||| ||||| ||||||||    
T  45885738 tttctccgttttgactgggtttgggtatgggtatgagttttccccgatctcaaaacacgggtatgggacgggtaacaagtatataggtacccaccccgaa 45885837  T
Q  210 cacatacc 217  Q
    | ||||||    
T  45885838 cccatacc 45885845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 17885585 - 17885471
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| |||||||  |||||| | ||||||||||||||||| |||| | || || ||||||| ||||| | ||||| || |||||||||||    
T  17885585 tttccccgttttgactgggtttgaatatgggtatgggttttccccgattttaaaacatgggtatgggacgggtaacgggtatataggttccaaccccgaa 17885486  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||| ||||    
T  17885485 cccatacccataccc 17885471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 35074590 - 35074476
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||||||||| | |||| |||| || ||||||| ||||| | ||||| ||||| | ||||||    
T  35074590 tttccccgttttgactgggtttgggtatgggtatgggttttccccgatcttaaaacacgggtatgggacgggtaacgggtatataggtacccaacccgaa 35074491  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  35074490 cccatacccaaaccc 35074476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 38153038 - 38152893
Alignment:
Q  78 tacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacggga 177  Q
    |||||| || |||||| ||  |||||| ||| |||| ||| ||||| ||||||| | ||||| | |||||||||||||||||||||| | || || || |    
T  38153038 tacccgcccgaaccaaactcaatttgacggattttc-ccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaacatgggtatggaa 38152940  T
Q  178 cggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||||   ||||| ||||| ||||||||| |||||| ||||||    
T  38152939 cggataacggctatataggtacccaccccgaacccatacctaaaccc 38152893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 41103743 - 41103670
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    |||||||||||||||||||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||    
T  41103743 tgggttttccccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaacccatac 41103670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 141 - 221
Target Start/End: Complemental strand, 5377174 - 5377094
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaa 221  Q
    |||||||||||||||||||||||| || | || ||||||| ||| | | ||||| ||||| ||||||||| ||||||||||    
T  5377174 tttgggttttccccgatttcaaaacacaggtatgggacgggtaaagggtatataggtacccaccccgaacccatacccaaa 5377094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 44985880 - 44985944
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaa 163  Q
    |||||| ||| |||||||| ||||||||||||| | ||||||| ||||||||| |||||||||||    
T  44985880 atttgacggattttctccgttttgattgggtttgggtatggatatgggttttctccgatttcaaa 44985944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 10995838 - 10995921
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||||||||||||||||| | |||| || ||||||| ||||  || ||||| |||| ||||||||| |||||||| ||||    
T  10995838 tttgggttttccccgatttcaagacacgggtatgggacgggtaacagggttatatatacccaccccgaacccatacccataccc 10995921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 12980353 - 12980278
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||||||||||||| |||| |||||| || || ||||  |||| ||||||||| ||||||||||||| ||||    
T  12980353 tgatatgccatgttattttgtttgataattttcgtgttataaaaactatcattgatatttaaaggagcaactaaat 12980278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 23475267 - 23475362
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgta 236  Q
    |||||||||| ||||||||||||| |||| |  |||| || ||| | ||||||||||||| ||  ||||| |||||||||||||  ||||||||||    
T  23475267 tttgggtttttcccgatttcaaaacacgggtttgggatgggtaatggggatatatgtacccacttcgaacccatacccaaacccgtcccgaatgta 23475362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 17851983 - 17851860
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||||||| |||||||| ||||| ||||||| | ||||| | ||||||||||||||  ||  || |||| || ||||||| |||||   ||||| |||    
T  17851983 atttgatggattttctccgttttgactgggtttgggtatgggtatgggttttccccga--tcttaacacgggtatgggacgggtaacggatatataggta 17851886  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || | ||||||| |||||||||||||    
T  17851885 cccatcccgaacccatacccaaaccc 17851860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 200
Target Start/End: Complemental strand, 24753315 - 24753194
Alignment:
Q  78 tacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacggga 177  Q
    ||||||||| ||||||  |  |||||| ||| |||||||| ||||| ||||||| ||||||| | |||||||| |||||| |||||| |||| || ||||    
T  24753315 tacccgtccgaaccaaattcaatttgacggattttctccgttttgactgggtttggatatgggtatgggtttt-cccgatctcaaaacacgggtatggga 24753217  T
Q  178 cggataacgaggatatatgtacc 200  Q
    ||| ||||| | ||||| |||||    
T  24753216 cgggtaacgggtatataggtacc 24753194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 2630562 - 2630670
Alignment:
Q  125 tgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||| | ||||| ||||||||||||||||||| |||| | || || ||||||| | ||| | |||||  |||| ||||||||| |||||||||||||    
T  2630562 tgggtttgggtatgggtttgggttttccccgattt-aaaacatgggtatgggacgggtgacgggtatatagatacccaccccgaacccatacccaaaccc 2630660  T
Q  225 tacccgaatg 234  Q
      ||||||||    
T  2630661 gtcccgaatg 2630670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 216
Target Start/End: Original strand, 3226952 - 3227025
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    |||||||||||||||||||||| |||| || ||||||| ||||  | ||||| ||||| ||||||||| |||||    
T  3226952 tgggttttccccgatttcaaaacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccatac 3227025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 18125234 - 18125315
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||| |||||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  18125234 tgggtttttcccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacgcatacccaaaccc 18125315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 21702746 - 21702665
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| ||||||| |||||    
T  21702746 tgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccccaaccc 21702665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 26623040 - 26622959
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    ||||||||||||| |||||||||| |||| || |||| || ||| | | ||||| ||||| ||||||||| |||||||||||    
T  26623040 tttgggttttccctgatttcaaaacacgggtatgggatgggtaatgggtatataagtacccaccccgaacccatacccaaac 26622959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 216
Target Start/End: Complemental strand, 33841173 - 33841092
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    |||| ||||| ||||||||||||||||||| |||| || ||||||| ||||  || |||||||||  ||||||||| |||||    
T  33841173 tatgaatttgagttttccccgatttcaaaacacgggtatgggacgggtaacatggttatatgtactcaccccgaacccatac 33841092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 351
Target Start/End: Complemental strand, 37579236 - 37579164
Alignment:
Q  279 tatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    ||||||||||||||| |||| |||||||||||| ||||  || | ||||||||| ||||| ||||||| ||||    
T  37579236 tatgccatgttattttgtttgataattgtcatgttataaaaattatcattgatatttaaatgagcaactaaat 37579164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 3920515 - 3920440
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||||||||||||| |||| ||||||| |||| ||||  ||||  |||||||| |||||||| |||| ||||    
T  3920515 tgatatgccatgttattttgtttgataattgccatgttataaaaactaccattgatatttaaaggaacaactaaat 3920440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 23533608 - 23533702
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgta 236  Q
    ||||||||||||||||||| ||||||||| || | || || ||| | ||||||||||||| ||  ||||| ||||||||||| |  ||||||||||    
T  23533608 tttgggttttccccgatttgaaaatacgggtatgcgatgggtaatg-ggatatatgtacccacttcgaacccatacccaaactcgtcccgaatgta 23533702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 26004588 - 26004655
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagc 343  Q
    |||||||||||||||||| |||| ||||||||| |  ||||  |||| ||||||||| ||||||||||    
T  26004588 tgatatgccatgttattttgtttgataattgtcttcttataaaaactatcattgatatttaaaggagc 26004655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 25979923 - 25980001
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaa 221  Q
    |||||||||||||||||||||| || | || | ||||| |||||   ||||||||||| ||||| ||| ||||||||||    
T  25979923 tgggttttccccgatttcaaaacacaggtatgagacgggtaacggatatatatgtacccaccccaaactcatacccaaa 25980001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 180
Target Start/End: Original strand, 10990871 - 10990904
Alignment:
Q  147 ttttccccgatttcaaaatacggatacgggacgg 180  Q
    ||||||||||||||||||||||| ||||||||||    
T  10990871 ttttccccgatttcaaaatacgggtacgggacgg 10990904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 26622928 - 26622859
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaa 345  Q
    |||||||||||||||||| |||| ||||||||  || ||||  ||||  |||||||| ||||||||||||    
T  26622928 tgatatgccatgttattttgtttgataattgttgtgttataaaaactaccattgatatttaaaggagcaa 26622859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 356
Target Start/End: Original strand, 38139909 - 38139990
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgat-ataggaactttcattgatagttaaaggagcaaccaaattattc 356  Q
    ||||||| |||||||||| |||| |||||||||||| | |||  |||| ||||||||| |||||||| |||| |||| ||||    
T  38139909 tgatatgtcatgttattttgtttgataattgtcatgttaataaaaactatcattgatatttaaaggatcaactaaatcattc 38139990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 165; Significance: 4e-88; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 77 - 377
Target Start/End: Complemental strand, 67897 - 67597
Alignment:
Q  77 gtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacggg 176  Q
    ||||||| |||||||||||  |||||||  |  |||| ||||||||| |||||||   ||||| ||||| ||||||||||||| ||||||||||||||||    
T  67897 gtacccgcccaaaccaaccccgatttgacaggttttccccgatttgactgggtttgagtatgggtttggattttccccgattttaaaatacggatacggg 67798  T
Q  177 acggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataat 276  Q
    |||||||||| ||||||||||||| ||||||| |  |||||||||||||||| ||||||||| | |||||| ||||||||||||||||| |||| |||||    
T  67797 acggataacggggatatatgtacccaccccgagcctatacccaaaccctacctgaatgtagaaaggtcatatttttgtttttgttgagggggttaataat 67698  T
Q  277 gatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatg 376  Q
    ||||||| |||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||    
T  67697 gatatgctatgttatttgatttgataattgtcatgatataagaactttcattgatggttaaaggagcaacataattattcggtaaggaaatgttaaaatg 67598  T
Q  377 a 377  Q
    |    
T  67597 a 67597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 77 - 377
Target Start/End: Complemental strand, 75740 - 75440
Alignment:
Q  77 gtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacggg 176  Q
    ||||||| |||||||||||  |||||||  |  |||| ||||||||| |||||||   ||||| ||||| ||||||||||||| ||||||||||||||||    
T  75740 gtacccgcccaaaccaaccccgatttgacaggttttccccgatttgactgggtttgagtatgggtttggattttccccgattttaaaatacggatacggg 75641  T
Q  177 acggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataat 276  Q
    |||||||||| ||||||||||||| ||||||| |  |||||||||||||||| ||||||||| | |||||| ||||||||||||||||| |||| |||||    
T  75640 acggataacggggatatatgtacccaccccgagcctatacccaaaccctacctgaatgtagaaaggtcatatttttgtttttgttgagggggttaataat 75541  T
Q  277 gatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatg 376  Q
    ||||||| |||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||    
T  75540 gatatgctatgttatttgatttgataattgtcatgatataagaactttcattgatggttaaaggagcaacataattattcggtaaggaaatgttaaaatg 75441  T
Q  377 a 377  Q
    |    
T  75440 a 75440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 9e-86; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 46 - 382
Target Start/End: Original strand, 15068497 - 15068832
Alignment:
Q  46 gtaggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgg 145  Q
    ||||| |||| |||||| | | || |||| |||||||| |||||||||||  ||||||| ||  |||| ||||||||| ||||| | | ||||| || ||    
T  15068497 gtaggcatggcaacaaaacccgtgcccatgggtacccgcccaaaccaaccccgatttgacgggttttccccgatttgactgggtctgggtatgggttcgg 15068596  T
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtca 245  Q
    |||||||||||||||||||||||| |||||||| | ||||| ||||||||||| | ||||||||| ||||||| ||||||||||||||||||| | ||||    
T  15068597 gttttccccgatttcaaaatacgggtacgggacaggtaacg-ggatatatgtatccaccccgaacccatacccgaaccctacccgaatgtagaaaggtca 15068695  T
Q  246 taattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaa 345  Q
    || |||| |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||| |||    
T  15068696 tatttttatttttgtttagggggttgataatgatatgccatgttatttggtttgataattgtcatgatataagaattttcattgataggtaaaggatcaa 15068795  T
Q  346 ccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    || ||||||||  || |||||||||||||||||||||    
T  15068796 ccgaattattcaataaggaaatgttaaaatgaacgca 15068832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 45 - 378
Target Start/End: Complemental strand, 10297639 - 10297304
Alignment:
Q  45 agtaggtatggtaacaaag-ctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggattt 143  Q
    |||||| |||||||||||  | |||| |||| |||||||| ||||||||| | |||||||| ||  |||| | ||||| ||||||||| ||| || ||||    
T  10297639 agtaggcatggtaacaaaaacccatgcccatgggtacccgcccaaaccaatcctgatttgacgggttttccctgattttattgggtttggatgtgaattt 10297540  T
Q  144 gggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccg-aatgtagagatg 242  Q
    ||||||||||||||||||||||||||  ||||||| | ||||| ||||||||||||| |||| |||| |||||| |||||||||||  |||||||| | |    
T  10297539 gggttttccccgatttcaaaatacggggacgggacaggtaacggggatatatgtacctaccctgaacccataccaaaaccctacccccaatgtagaaagg 10297440  T
Q  243 tcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggag 342  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| || | ||| |||||||| ||||||||| |||||||||||||||    
T  10297439 tcatacttttgtttttgttgaggggattgataatgatatgccatgttatttggtttgatgactgtgatgatataagaactttcactgatagttaaaggag 10297340  T
Q  343 caaccaaattattcggtatggaaatgttaaaatgaa 378  Q
     |||| |||||||||||| | |||||||||||||||    
T  10297339 aaaccgaattattcggtaagaaaatgttaaaatgaa 10297304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 141 - 389
Target Start/End: Complemental strand, 40789673 - 40789425
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    |||||||||||||| |||||| ||||  | ||| |||||| ||||  ||||||||||||| |||||||||  |||||||||| ||||||||||||||| |    
T  40789673 tttgggttttccccaatttcataatataggtactggacgggtaacagggatatatgtacccaccccgaacctatacccaaactctacccgaatgtagaaa 40789574  T
Q  241 tgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaagg 340  Q
     |||||  ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | |||||||||| |||||||||||||| ||||||||    
T  40789573 ggtcatgtttttgtttttgttgagggggttgataatgatatgtcatgttatttggtttgataactatcatgatataagaactttcattgatggttaaagg 40789474  T
Q  341 agcaaccaaattattcggtatggaaatgttaaaatgaacgcatattctt 389  Q
    ||||||| | ||||| |||| |||||||||||||||| |||| ||||||    
T  40789473 agcaaccgagttatttggtaaggaaatgttaaaatgagcgcaaattctt 40789425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 193 - 375
Target Start/End: Complemental strand, 8031170 - 8030990
Alignment:
Q  193 tatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatt 292  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||| | |||||  ||||||||| ||||||| ||||||||||||||||||||||||||    
T  8031170 tatgtacccacctcgaacccatacccaaaccctacccgaatgtaga-aggtcatgtttttgtttt-gttgagggggttgataatgatatgccatgttatt 8031073  T
Q  293 tggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaat 375  Q
    |||||| |||||||| |||||||| ||| |||||||| || ||||||||| |||  ||||||| |||| ||||||||||||||    
T  8031072 tggtttgataattgttatgatataagaaatttcattggtaattaaaggagaaactgaattatttggtaaggaaatgttaaaat 8030990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 118 - 382
Target Start/End: Original strand, 2183587 - 2183873
Alignment:
Q  118 atttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacc 217  Q
    |||||| ||||||| | ||||  ||||| ||||| ||||||||||||||||| |||| ||  | ||| |  |||||||||||| ||||||||| |||||     
T  2183587 atttgactgggtttaggtatgagtttggattttctccgatttcaaaatacgggtacgagagaggtaatggagatatatgtacccaccccgaactcatact 2183686  T
Q  218 caaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgc----------------------catgttatttgg 295  Q
    ||||||||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||||                      ||||||||||||    
T  2183687 caaaccctacccgaatgtagaaaggtcatatttttgtttttgttaaggaggttgataatgatatgcatgttatttggtttgataattgcatgttatttgg 2183786  T
Q  296 tttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||| ||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||   |||| ||||||||| ||||    
T  2183787 tttgataattgtcatgatataagaactttcatggatagttaaaggagcaaccgaattattcggtaacaaaattttaaaatgagcgca 2183873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 213 - 377
Target Start/End: Original strand, 4594213 - 4594375
Alignment:
Q  213 atacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatga 312  Q
    |||||||||| ||||| ||||||||| | ||| |  |||| ||||||  |||| |||||||||||||||| ||||||||||||||| |||||||||||||    
T  4594213 atacccaaactctacctgaatgtagaaaagtcgtgttttt-tttttgc-gagggggttgataatgatatgtcatgttatttggtttgataattgtcatga 4594310  T
Q  313 tataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatga 377  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| || | ||||||||||||||    
T  4594311 tataagaactttcattgatagttaaaggagcaaccgaattattcgttaagaaaatgttaaaatga 4594375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 2189907 - 2190016
Alignment:
Q  197 taccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggt 296  Q
    |||| ||||||||| ||||| ||||||||||||||||||||| | |||||| ||||||||||||| |||||||||||||||||||| |||||||||||||    
T  2189907 tacccaccccgaacccatactcaaaccctacccgaatgtagaaaggtcatatttttgtttttgttaaggaggttgataatgatatgtcatgttatttggt 2190006  T
Q  297 ttcataattg 306  Q
    || |||||||    
T  2190007 ttgataattg 2190016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 238
Target Start/End: Original strand, 15173813 - 15173981
Alignment:
Q  70 tccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgg 169  Q
    ||||| |||||||| |||||||||||| ||||||| ||  |||||| ||||||| ||||||| | ||||  |||| ||||| ||||||||||||||||||    
T  15173813 tccatgggtacccgcccaaaccaacctcgatttgacgggttttctctgatttgactgggtttgggtatgtgtttgagtttttcccgatttcaaaatacgg 15173912  T
Q  170 atacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
     |||||||||| |||    |||||||||| | ||| ||||| ||||| |||||| ||||||||||||||    
T  15173913 gtacgggacgggtaaatgagatatatgtatccacctcgaactcatactcaaaccgtacccgaatgtaga 15173981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 295 - 377
Target Start/End: Original strand, 15174007 - 15174089
Alignment:
Q  295 gtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatga 377  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  15174007 gtttgataattgtcatgatataagaactttcattgatagttaaaggagcaaccgaattattcggtaaggagatgttaaaatga 15174089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 284 - 382
Target Start/End: Original strand, 2190017 - 2190115
Alignment:
Q  284 catgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||   |||| ||||||||| ||||    
T  2190017 catgttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaaccgaattattcggtaacaaaattttaaaatgagcgca 2190115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 14687505 - 14687402
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||||||||||| | |||||||||||||||||||||||||||||| || | || ||||||   |||  ||||||||||| | ||||||||| |||||||    
T  14687505 tttgattgggtttgggtatggatttgggttttccccgatttcaaaacacaggtatgggacgagaaacagggatatatgtatccaccccgaacccataccc 14687406  T
Q  219 aaac 222  Q
    ||||    
T  14687405 aaac 14687402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 20399707 - 20399583
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| ||||||||||| |||||||||||| |||| || ||||||| ||||| | |||||  |||| ||||||||    
T  20399707 tttccccgttttgactgggtttgggtatgggtttgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccaccccgaa 20399608  T
Q  210 cacatacccaaaccctacccgaatg 234  Q
    | ||| |||||||||  ||||||||    
T  20399607 cccattcccaaacccgtcccgaatg 20399583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 141 - 224
Target Start/End: Complemental strand, 17469339 - 17469256
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||||||||||||||||||| |||| || ||||||| ||||| | ||||| ||||| ||||| ||| |||||||||||||    
T  17469339 tttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaacccatacccaaaccc 17469256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 9476008 - 9476114
Alignment:
Q  133 gatatggatttgggttttcccc-gatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccga 231  Q
    ||||||||| ||| |||||||| |||||||||| |||||||||||||   ||||| |||||||  |||| ||| ||||| |||||||||||||  |||||    
T  9476008 gatatggatatggattttcccccgatttcaaaaaacggatacgggacaagtaacggggatataaatacccacctcgaacccatacccaaacccatcccga 9476107  T
Q  232 atgtaga 238  Q
    |||||||    
T  9476108 atgtaga 9476114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 32303176 - 32303062
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||||||||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||    
T  32303176 tttccccgttttgactgggtttgggtatgggtatgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaa 32303077  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  32303076 cccatacccaaaccc 32303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 30481385 - 30481520
Alignment:
Q  101 ttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtacc 200  Q
    |||||||| |||| | | |||||||||||||   ||||  |||||||||| || ||||||||||||||  || | ||||  ||| ||||||||| |||||    
T  30481385 ttgatggattttccctgttttgattgggtttgagtatgagtttgggtttttcctgatttcaaaatacgagtatgagacgagtaatgaggatataggtacc 30481484  T
Q  201 aaccccgaacacatacccaaaccctacccgaatgta 236  Q
     ||||||||| ||||||||||| |  ||||||||||    
T  30481485 caccccgaacccatacccaaactcgtcccgaatgta 30481520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 1063589 - 1063511
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaa 221  Q
    |||||||| ||||||||||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| ||||||||||    
T  1063589 tgggtttttcccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaactcatacccaaa 1063511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 27932528 - 27932422
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | |||||||||||||||||||||| |||| || ||||||  ||||| | ||||| ||||| ||||||||    
T  27932528 tttccccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaacacgggtatgggacgagtaacgggtatataggtacccaccccgaa 27932429  T
Q  210 cacatac 216  Q
    | |||||    
T  27932428 cccatac 27932422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 29108795 - 29108909
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | |||||||| |||||||| |||| | || || ||||||| ||||| | ||||||||||| ||||||||    
T  29108795 tttccccgttttgactgggtttgggtatgggtatgggtttttcccgattttaaaacatgggtatgggacgggtaacgggtatatatgtacccaccccgaa 29108894  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||| ||||    
T  29108895 cccatacccataccc 29108909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 224
Target Start/End: Original strand, 17084109 - 17084194
Alignment:
Q  139 gatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||| ||||||| |||| |||| |||| ||||| ||||| |||||||  |||| ||||||||| |||| ||||||||    
T  17084109 gatttgggttttctccgattttaaaacacgggtacgagacgggtaacggggatatagatacccaccccgaactcatatccaaaccc 17084194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 125 - 205
Target Start/End: Original strand, 32392374 - 32392454
Alignment:
Q  125 tgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccc 205  Q
    ||||||||| |||||||||||||||| | ||||||||||| |||  || ||||| ||||| ||| ||||||||||| ||||    
T  32392374 tgggttttggtatggatttgggtttttctcgatttcaaaacacgagtatgggacagataatgagaatatatgtacccaccc 32392454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 263
Target Start/End: Original strand, 14507231 - 14507350
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    |||||||||||| | |||  |||||| || || ||||||| ||| |  |||||||||| | ||||||||| ||  |||||||| |||||||||||||| |    
T  14507231 tttgggttttcctcaattataaaatatgggtatgggacgggtaaaggtgatatatgtatccaccccgaaccca--cccaaacc-tacccgaatgtagaaa 14507327  T
Q  241 tgtcataattttgtttttgttga 263  Q
     |||||| |||||||||||||||    
T  14507328 agtcatatttttgtttttgttga 14507350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 27056543 - 27056634
Alignment:
Q  125 tgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    ||||||| | ||||| |||||||||| |||||||||||| ||| | || ||||||| ||||| || ||||| |||| ||||||||| |||||    
T  27056543 tgggtttggttatgggtttgggtttttcccgatttcaaagtacaggtatgggacgggtaacggggttatatctacccaccccgaacccatac 27056634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 222
Target Start/End: Original strand, 27777136 - 27777283
Alignment:
Q  75 aggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacg 174  Q
    |||||||  ||| |||||| ||| |||||| ||  |||||||| ||||| ||||||| | ||||  |||| ||||| ||||||||||||| || | ||||    
T  27777136 aggtacctatccgaaccaaacttaatttgacgggttttctccgttttgactgggtttgggtatgtgtttgagtttttcccgatttcaaaacacaggtacg 27777235  T
Q  175 ggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    |||| | ||||   |||| | ||||| ||||||||| |||||||||||    
T  27777236 ggacaggtaacagagatacaggtacccaccccgaacccatacccaaac 27777283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 28345597 - 28345494
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||| | ||||| |||| ||||||| ||||| |||| ||| ||| || ||||||||||||| | ||| ||||||||| |||||||    
T  28345597 tttgactgggtttcggtataggtttggattttacccgattccaaaacacgggtacaggatgggtaacgaggatataggcacccaccccgaacccataccc 28345498  T
Q  219 aaac 222  Q
    ||||    
T  28345497 aaac 28345494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 24928064 - 24927950
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||||| ||| || ||| |||| || | ||||| ||||| | ||||| ||||| ||||||||    
T  24928064 tttccccgttttgactgggtttgggtatgggtatgggttttccctgatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccgaa 24927965  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  24927964 cccatacccaaaccc 24927950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 224
Target Start/End: Original strand, 39445521 - 39445663
Alignment:
Q  82 cgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacgga 181  Q
    ||||| |||||| ||  |||||| ||| |||| ||| ||||| | ||||| | ||||| | |||||||| ||||||||||||| |||| || ||||| |     
T  39445521 cgtccgaaccaaactcaatttgacggattttccccgttttgactaggtttgggtatgggtatgggtttttcccgatttcaaaacacgggtatgggacagg 39445620  T
Q  182 taacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||| |  |||| ||||| ||||||||| |||||||| ||||    
T  39445621 taacgggtttataggtacccaccccgaactcatacccataccc 39445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 6388478 - 6388579
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| || ||||||||| ||||| || |||| | ||||| ||||||| ||||||||||| |||| |||| |||  ||||| ||||| ||||||| |||    
T  6388478 atttgacgggctttctccgttttgactgagtttgggtatgggtttgggtcttccccgattttaaaacacgggtacaagacgggtaacggggatataggta 6388577  T
Q  199 cc 200  Q
    ||    
T  6388578 cc 6388579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 219
Target Start/End: Original strand, 40248380 - 40248453
Alignment:
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccca 219  Q
    ||||||||||||||||||| |||| || | ||||||||||| | ||||| ||||| | ||||||| ||||||||    
T  40248380 gttttccccgatttcaaaacacgggtatgagacggataacgggtatataggtacccatcccgaacccataccca 40248453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 5858625 - 5858701
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacg 186  Q
    |||| ||| ||||||||||||| | ||||| |||||||||| |||||||| |||| |||| || ||||||| |||||    
T  5858625 tttccccgttttgattgggtttgggtatgggtttgggtttttcccgatttaaaaacacgggtatgggacgggtaacg 5858701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 333 - 377
Target Start/End: Original strand, 14507579 - 14507623
Alignment:
Q  333 gttaaaggagcaaccaaattattcggtatggaaatgttaaaatga 377  Q
    |||||||||||||||||||||||||  | ||||||||||||||||    
T  14507579 gttaaaggagcaaccaaattattcgacaaggaaatgttaaaatga 14507623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 216
Target Start/End: Original strand, 9642355 - 9642430
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    |||||||||||||||||||||||| |||| || ||||||| ||||| || ||||| || | | ||||||| |||||    
T  9642355 tttgggttttccccgatttcaaaacacgggtatgggacgggtaacggggttatatatatccatcccgaacccatac 9642430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 37960966 - 37961049
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||||||| |||| |||| || ||||| | ||||  | ||||| ||||  ||||||||| |||||||||||||    
T  37960966 tttgggttttccccgatttaaaaacacgggtatgggacaggtaacaggtatataggtacacaccccgaactcatacccaaaccc 37961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 133
Target Start/End: Original strand, 41188665 - 41188728
Alignment:
Q  70 tccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttg 133  Q
    ||||| |||| ||||||||||||||| | |||||||||  ||| ||||||||||||| ||||||    
T  41188665 tccatgggtatccgtccaaaccaaccctaatttgatgggttttttccgatttgattgagttttg 41188728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 43113631 - 43113710
Alignment:
Q  142 ttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaa 221  Q
    ||||||||| ||||||||||||| ||||  | ||||||| ||||  | ||||| ||||| ||||||||| ||||||||||    
T  43113631 ttgggtttttcccgatttcaaaacacgggcatgggacgggtaacaggtatataggtacccaccccgaactcatacccaaa 43113710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 8545353 - 8545434
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    ||||||||||| |||||||||||| |||| || || |||  ||||| |||||||  |||| ||||||||| ||||| |||||    
T  8545353 tttgggttttctccgatttcaaaacacgggtatggaacgagtaacggggatatagatacccaccccgaacccatactcaaac 8545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 35140454 - 35140414
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatata 316  Q
    ||||||||||||||||||||||| ||||||| |||| ||||    
T  35140454 tgatatgccatgttatttggtttaataattgacatgttata 35140414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 46 - 375
Target Start/End: Complemental strand, 18909072 - 18908744
Alignment:
Q  46 gtaggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgg 145  Q
    ||||| |||| |||||| | | || ||||||||||||| |||||||||||| ||||||| ||| |||  ||||| ||| || ||||   ||||  |||||    
T  18909072 gtaggcatggcaacaaaacccgtgcccataggtacccgcccaaaccaacctcgatttgacggatttttcccgatgtgactgagtttgagtatgagtttgg 18908973  T
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtca 245  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||| | | ||||    
T  18908972 gttttccccgatttcaaaatacggatatgggacgggtaacaaggatatatgtacccaccccaaactcatacccaaaccctacccgaatgtaaaaaggtca 18908873  T
Q  246 taattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaa 345  Q
    |  |||| |||||||||||| || |||||||||||| ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||    
T  18908872 tgttttt-tttttgttgagggggctgataatgatataccatgttatttggattgataattgtcatgatataagaactttcattgatagttaaaggagcaa 18908774  T
Q  346 ccaaattattcggtatggaaatgttaaaat 375  Q
    || ||||||||| || | |||||| |||||    
T  18908773 ccgaattattcgataagaaaatgtcaaaat 18908744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 45 - 374
Target Start/End: Original strand, 29199805 - 29200122
Alignment:
Q  45 agtaggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttg 144  Q
    |||||| |||| ||||||   |||| ||||||||||||| |||||||||||  ||||||| ||| |||| ||||||||||||||||| |||             
T  29199805 agtaggcatggcaacaaaatccatgcccataggtacccgcccaaaccaaccccgatttgacggattttccccgatttgattgggtttggat--------- 29199895  T
Q  145 ggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtc 244  Q
       |||||||||||||||||||||| |||||||||| ||||  ||||||||||| | ||||||||| ||||||||||| ||||||||||||||| | |||    
T  29199896 ---tttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatctaccccgaacccatacccaaactctacccgaatgtagaaaggtc 29199992  T
Q  245 ataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagca 344  Q
    ||| ||||||||||||| | | | |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||    
T  29199993 atatttttgtttttgttaaagggattgataatgatatgccatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggaaca 29200092  T
Q  345 accaaattattcggtatggaaatgttaaaa 374  Q
    ||| |||||| ||||| |||||||||||||    
T  29200093 accgaattatgcggtaaggaaatgttaaaa 29200122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 85 - 374
Target Start/End: Complemental strand, 9458803 - 9458516
Alignment:
Q  85 ccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataa 184  Q
    |||||||||||| ||||||| ||| |||| ||||||||| ||||||| | ||||  |||| | ||||||| |||||||||||||| |||||||| |||||    
T  9458803 ccaaaccaacctcgatttgacggattttccccgatttgactgggtttgggtatgagtttgagatttccccaatttcaaaatacgggtacgggacagataa 9458704  T
Q  185 cgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgcc 284  Q
    || ||||||||||||| ||| ||||| |||||||||| |||||||||||||  | | |||||| |||||||||  || ||| |||||||||||||||| |    
T  9458703 cggggatatatgtacccacctcgaactcatacccaaatcctacccgaatgtgaaaaagtcatatttttgtttt--tttagggggttgataatgatatgtc 9458606  T
Q  285 atgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaa 374  Q
    || ||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||    
T  9458605 atcttatttggtttgataattctcatgatataagaactttcattgatagttaaaggaacaaccgaattattcggtaaggaaatgttaaaa 9458516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 249 - 389
Target Start/End: Complemental strand, 9458296 - 9458156
Alignment:
Q  249 ttttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaacca 348  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||| |||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  9458296 ttttgtttttgttgaggggattgataatgatatgtcatgttatttggtttgataattatcatgatataagaacttttattgatggttaaaggagcaacca 9458197  T
Q  349 aattattcggtatggaaatgttaaaatgaacgcatattctt 389  Q
    |||||||||||| | |||||||||||||| |||| ||||||    
T  9458196 aattattcggtaagaaaatgttaaaatgagcgcaaattctt 9458156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 71 - 313
Target Start/End: Original strand, 20610916 - 20611158
Alignment:
Q  71 ccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgga 170  Q
    |||| |||||||| | |||||||| | ||||||| ||  |||  ||||||| | ||||||| | ||||| |||||| ||||||||||||||||||||||     
T  20610916 ccatgggtacccgccaaaaccaacttcgatttgacgggtttttcccgatttaactgggtttaggtatgggtttggggtttccccgatttcaaaatacggg 20611015  T
Q  171 tacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggtt 270  Q
    || ||||||| ||||| | ||||||||| | ||||||||   ||||||| |||||||| ||||||||| | |||||| |||| |||||||||||| ||||    
T  20611016 taggggacgggtaacgggaatatatgtatccaccccgaaactatacccagaccctacctgaatgtagaaaggtcatatttttatttttgttgagggggtt 20611115  T
Q  271 gataatgatatgccatgttatttggtttcataattgtcatgat 313  Q
    |||||||||||| ||||||||||| ||| | |||| |||||||    
T  20611116 gataatgatatgtcatgttatttgttttgacaattttcatgat 20611158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 273
Target Start/End: Original strand, 17546818 - 17547038
Alignment:
Q  52 atggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttc 151  Q
    |||| |||||| | |||||| || |||||| | ||||||||||| ||||| |||||  ||| | | |||||| ||||||| | ||||| |||||| ||||    
T  17546818 atggcaacaaaacccatgtctatgggtacctgcccaaaccaaccctgatt-gatgggtttttttcaatttgactgggtttgggtatgggtttggggtttc 17546916  T
Q  152 cccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattt 251  Q
    | |||||||| |||||||||||||||  | ||||| ||||| ||||||| ||||||||| |||| |||||||||||||||| ||||| |  ||||  |||    
T  17546917 ctcgatttcataatacggatacgggatcggtaacggggatacatgtacccaccccgaactcatatccaaaccctacccgaacgtagaaagttcatgtttt 17547016  T
Q  252 tgtttttgttgaggaggttgat 273  Q
    | |||||||||||| |||||||    
T  17547017 tatttttgttgagggggttgat 17547038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 9458968 - 9458845
Alignment:
Q  115 ccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacat 214  Q
    ||||||||| ||||||| | ||||| | ||||||||||||||||| | ||||||| ||||||| || ||||| | ||||||||||| |||||||||  ||    
T  9458968 ccgatttgactgggtttgggtatgggtctgggttttccccgatttaataatacgggtacgggatgggtaacgggaatatatgtacccaccccgaacttat 9458869  T
Q  215 acccaaaccctacccgaatgtaga 238  Q
    |||||||| |||||||||||||||    
T  9458868 acccaaactctacccgaatgtaga 9458845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 221
Target Start/End: Original strand, 28079694 - 28079780
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaa 221  Q
    ||||| |||||||||||||||||||||||| | || |||||||||| ||||| ||||||| ||||| ||||||||| ||||||||||    
T  28079694 tatgggtttgggttttccccgatttcaaaacatgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 32853959 - 32853845
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||| ||||| ||||||| | ||||| | ||||||||||||||| |||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||    
T  32853959 tttctccgttttgactgggtttggttatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaa 32853860  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  32853859 cccatacccaaaccc 32853845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 27738878 - 27738773
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| | |||||||||||||||||||||| |||| || ||||||| ||||    ||||||||||| ||||||||| |||||||    
T  27738878 tttgactgggtttaggtatgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacagatatatatgtacccaccccgaacccataccc 27738779  T
Q  219 aaaccc 224  Q
    ||||||    
T  27738778 aaaccc 27738773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 32053170 - 32053089
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||||||||||||||||| | ||||| ||||||| ||||| | ||||||||||| ||||| ||| |||||||||||||    
T  32053170 tgggttttccccgatttcaaaacatggatatgggacgggtaacgggtatatatgtacccaccccaaacccatacccaaaccc 32053089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 221
Target Start/End: Complemental strand, 20349175 - 20349068
Alignment:
Q  114 tccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacaca 213  Q
    |||| ||| |||| |||||| ||||  ||||| |||||||||||||||||| |||| || ||||||  ||||| ||||||| ||||| ||||||||| ||    
T  20349175 tccgcttttattgagttttggtatgagtttggattttccccgatttcaaaacacgggtatgggacgagtaacggggatataggtacccaccccgaactca 20349076  T
Q  214 tacccaaa 221  Q
    ||||||||    
T  20349075 tacccaaa 20349068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 2367473 - 2367327
Alignment:
Q  78 tacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacggga 177  Q
    ||||||||| |||||| |   |||||||||  |||  ||| ||||| | ||||| | ||||| | ||||||||||||||| |||||| |||| || ||||    
T  2367473 tacccgtccgaaccaaacccaatttgatgggtttttcccgttttgactaggtttgggtatgggtatgggttttccccgatctcaaaacacgggtatggga 2367374  T
Q  178 cggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  2367373 cgggtaacgggtatataagtacccaccccgaacccatacccaaaccc 2367327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 5863356 - 5863470
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | |||||||||||||||||||||| |||| || ||||||| ||||| | |||||  |||| ||| ||||    
T  5863356 tttccccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacctcgaa 5863455  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  5863456 cccatacccaaaccc 5863470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 119 - 223
Target Start/End: Original strand, 10142500 - 10142604
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| | ||||||||||||||| |||||| |||| || ||||| | ||||| | ||||| ||||| ||||||||| |||||||    
T  10142500 tttgactgggtttgggtatgggtatgggttttccccgatctcaaaaaacgggtatgggacaggtaacgggtatataggtacccaccccgaactcataccc 10142599  T
Q  219 aaacc 223  Q
    |||||    
T  10142600 aaacc 10142604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 24225799 - 24225699
Alignment:
Q  124 ttgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaacc 223  Q
    |||||||| | ||||| | ||| ||||||||||| |||||| ||||||| ||||||| ||||| | ||||| ||||| ||||||||| ||| ||||||||    
T  24225799 ttgggtttgggtatgggtatggattttccccgatctcaaaacacggatatgggacgggtaacgggtatataggtacccaccccgaacccatgcccaaacc 24225700  T
Q  224 c 224  Q
    |    
T  24225699 c 24225699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 224
Target Start/End: Original strand, 14410859 - 14410942
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||| |||||||| |||||||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  14410859 tttgagttttcccagatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 14410942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 27534828 - 27534685
Alignment:
Q  81 ccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacgg 180  Q
    |||||| |||||| ||  |||||| ||  |||| ||| ||||||||||||| | ||||| | || |||||||||||| || ||| |||| || |||||||    
T  27534828 ccgtccgaaccaaactcaatttgacgggttttccccgttttgattgggtttgggtatgggtatgagttttccccgatctcgaaacacgggtatgggacgg 27534729  T
Q  181 ataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
     ||||| | ||||| ||||| ||||||||  |||||||||||||    
T  27534728 gtaacgggtatataggtacccaccccgaatccatacccaaaccc 27534685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 12141500 - 12141386
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | || || | |||||||||||| || |||||| ||||||| ||||||| | ||| | ||||| ||||| ||||||||    
T  12141500 tttccccgttttgactgggtttgggtacgggtatgggttttccccaatctcaaaacacggatatgggacgggtgacgggtatataggtacccaccccgaa 12141401  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  12141400 cccatacccaaaccc 12141386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 15498439 - 15498325
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||| ||||| ||||||| | ||||||| |||||||||||||||||||||| |||| || | ||| | ||| | | ||||| ||||| | ||||||    
T  15498439 tttctccgttttgaatgggtttgggtatggatatgggttttccccgatttcaaaacacgggtatgagacaggtaatgggtatataggtacccatcccgaa 15498340  T
Q  210 cacatacccaaaccc 224  Q
    | || ||||||||||    
T  15498339 cccacacccaaaccc 15498325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 11762545 - 11762432
Alignment:
Q  125 tgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||| ||||||||||| |||||| ||||||||| ||| | || || ||||||| ||||| | ||||| ||  | ||||||||| |||||||||||||    
T  11762545 tgggtttggatatggatttaggtttttcccgatttctaaacaagggtatgggacgggtaacgggtatataggtgtccaccccgaactcatacccaaaccc 11762446  T
Q  225 tacccgaatgtaga 238  Q
      ||| ||||||||    
T  11762445 atcccaaatgtaga 11762432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 29341371 - 29341243
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||| ||||||||||||| ||||||  |||||||||| ||||||||  ||| | ||  | | ||||| |||||  |||||| ||||| | ||| ||    
T  29341371 tttctccgttttgattgggtttggatatgagtttgggtttttcccgattttcaaacatgggcatgagacgggtaacggagatataggtacccatcccaaa 29341272  T
Q  210 cacatacccaaaccctacccgaatgtaga 238  Q
    | |||||||||||||  ||||||||||||    
T  29341271 ctcatacccaaacccgtcccgaatgtaga 29341243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 3483896 - 3484010
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||  | ||||||||||||||| || ||| |||| || |||| || ||||| | ||||| ||||| ||||||||    
T  3483896 tttccccgttttgactgggtttgggtatgtgtatgggttttccccgatctcgaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaa 3483995  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  3483996 cccatacccaaaccc 3484010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 224
Target Start/End: Original strand, 256454 - 256579
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||| ||||| |||| ||| |||| ||| |||| | ||||  |||| ||||||||||||||||||| | || |||| ||||| ||| | | ||||| |||    
T  256454 atttaatggattttccccgctttggttgtgtttgggtatgagtttgagttttccccgatttcaaaacatgggtacgagacgggtaatgggcatataggta 256553  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || ||||| ||| |||||||||||||    
T  256554 cccaccccaaacccatacccaaaccc 256579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 143 - 216
Target Start/End: Complemental strand, 32532622 - 32532549
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    |||||||||||||||||||||| |||| || ||||||| ||| | | ||||| ||||| ||||||||| |||||    
T  32532622 tgggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataggtacccaccccgaacccatac 32532549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 32959956 - 32959868
Alignment:
Q  128 gttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacc 217  Q
    |||||||| ||| |||||||||||||  ||||||||| |||| ||||| |||| ||||| ||||||| ||| | ||||||||| ||||||    
T  32959956 gttttgat-tgggtttgggttttccctaatttcaaaacacgggtacggaacgggtaacggggatataggtatccaccccgaacccatacc 32959868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 224
Target Start/End: Complemental strand, 12309673 - 12309573
Alignment:
Q  124 ttgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaacc 223  Q
    |||||||| | ||||| | ||||| ||||| |||||||||| |||| || || |||| ||||  | ||||||||||| |||||||||  |||||||||||    
T  12309673 ttgggtttgggtatgggtatgggtattccctgatttcaaaacacgggtatggaacgggtaacaggtatatatgtacccaccccgaaccgatacccaaacc 12309574  T
Q  224 c 224  Q
    |    
T  12309573 c 12309573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 234
Target Start/End: Complemental strand, 30816384 - 30816251
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||||||| |||| ||| ||||||||||||| ||||||| |||| |||||||||  |||  ||| |||| || |||| || ||| | | ||||| | |    
T  30816384 atttgatggattttccccgttttgattgggtttggatatgggtttgagttttccccatttt--aaacacgggtatgggatgggtaatgggtatataggaa 30816287  T
Q  199 ccaaccccgaacacatacccaaaccctacccgaatg 234  Q
    || ||||||||| |||| ||||||||  ||||||||    
T  30816286 cccaccccgaacccatatccaaacccgtcccgaatg 30816251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 355
Target Start/End: Complemental strand, 11762417 - 11762338
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattatt 355  Q
    |||||||||||||||||| |||  ||||||||| || ||||  ||||  |||||||| ||| ||||||||| ||||||||    
T  11762417 tgatatgccatgttattttgttatataattgtcgtgttataaaaactaccattgatatttataggagcaactaaattatt 11762338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 110 - 233
Target Start/End: Original strand, 12678067 - 12678190
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||  |||| ||||||||||||||||| | || | || ||||||| ||| | | ||||| ||||| |||| |||    
T  12678067 tttcgccgttttgactgggtttgggtatgagtttgcgttttccccgatttcaagacacaggtatgggacgggtaaagggtatataggtacccaccctgaa 12678166  T
Q  210 cacatacccaaaccctacccgaat 233  Q
    | |||||||||||||  |||||||    
T  12678167 cccatacccaaacccgtcccgaat 12678190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 12678210 - 12678285
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    ||||||| |||||||||| |||| ||||||||| || ||||  || | ||||||||| ||||||||||||| ||||    
T  12678210 tgatatgtcatgttattttgtttgataattgtcgtgttataaaaattatcattgatatttaaaggagcaactaaat 12678285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 13769178 - 13769059
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| ||| |||||||||||| ||||||| | || || ||||||| |||||   ||||| ||||| |||| |||| |||| ||    
T  13769178 tttgactgggtttaggtatgggtttcggttttccccgacttcaaaacatgggtatgggacgggtaacggacatataggtacccacccagaacccatatcc 13769079  T
Q  219 aaaccctacccgaatgtaga 238  Q
    ||||||  || |||||||||    
T  13769078 aaacccgtcctgaatgtaga 13769059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 14032528 - 14032453
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    ||||||| |||||||||| |||| ||||||||  || ||||  |||| ||||||||| ||||||||||||| ||||    
T  14032528 tgatatgtcatgttattttgtttgataattgttgtgttataaaaactatcattgatatttaaaggagcaactaaat 14032453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 14506170 - 14506095
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatac 216  Q
    |||||||||||||||||||||||| || | || ||||||| |||| || || || ||||| ||||||||| |||||    
T  14506170 tttgggttttccccgatttcaaaacacaggtatgggacgggtaacaagtatttaggtacccaccccgaacccatac 14506095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 9402676 - 9402619
Alignment:
Q  137 tggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatata 194  Q
    |||||||||||||||||||||||||||| | || ||| |||||| ||||  |||||||    
T  9402676 tggatttgggttttccccgatttcaaaacatgggtacaggacgggtaacatggatata 9402619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 185
Target Start/End: Original strand, 21875588 - 21875697
Alignment:
Q  76 ggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgg 175  Q
    |||||||||||||||||| ||| ||||||  |  ||||| ||  |||| ||||||||| | ||| |||| |||||| || |||| | || |||| |||||    
T  21875588 ggtacccgtccaaaccaaacttaatttgacaggttttcttcgtattgactgggttttggtttgggtttgagttttctccaattttataacacgggtacgg 21875687  T
Q  176 gacggataac 185  Q
    ||||||||||    
T  21875688 gacggataac 21875697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 24602860 - 24602957
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
    ||||||||||||| |||||||||| | || || | ||||| ||||  | |||||  |||| ||||||||| |||||||||||||  | ||||||||||    
T  24602860 tttgggttttcccagatttcaaaacatgggtatgtgacgggtaacaggtatatagatacccaccccgaacccatacccaaacccatcacgaatgtaga 24602957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 9e-80; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 47 - 377
Target Start/End: Complemental strand, 2681394 - 2681065
Alignment:
Q  47 taggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttggg 146  Q
    |||| |||| |||||| ||| || |||| |||||||||||||||||||||  |||||| ||  |||| ||||||||| || |||| |  |||  ||||||    
T  2681394 taggcatggcaacaaaactcgtgcccatgggtacccgtccaaaccaacctcaatttgacgggttttccccgatttgactgagtttgggcatgagtttggg 2681295  T
Q  147 ttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcat 246  Q
    ||||||||||||||||||||| | ||||||| || ||| | ||||||  ||| | ||||||||| ||||||||||||||| ||||||||||| | |||||    
T  2681294 ttttccccgatttcaaaatacaggtacgggatgggtaatggggatatgagtatccaccccgaacccatacccaaaccctatccgaatgtagaaaggtcat 2681195  T
Q  247 aattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaac 346  Q
    | ||||||||||| ||||| |||||||||||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  2681194 atttttgtttttgatgagg-ggttgataatgatatgtcatgttatttggtttgataattgtcatgaaataagaactttcattgatagttaaaggatcaac 2681096  T
Q  347 caaattattcggtatggaaatgttaaaatga 377  Q
    ||| ||||||| || ||||||||||||||||    
T  2681095 caagttattcgataaggaaatgttaaaatga 2681065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 76 - 392
Target Start/End: Original strand, 23044931 - 23045246
Alignment:
Q  76 ggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgg 175  Q
    |||||||| |||||||||||  ||||||| ||  |||  || |||||| || |||| | ||||| ||| ||||||||||||||||||||||||| |||||    
T  23044931 ggtacccgcccaaaccaaccccgatttgacgggtttttcccaatttgactgagtttgggtatgggtttaggttttccccgatttcaaaatacgggtacgg 23045030  T
Q  176 gacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataa 275  Q
    || || |||||  |||||||||||| ||||||||| |||||| |||||||||||||||||||| | |||||| |||||||||| || ||| |||||||||    
T  23045031 gatgggtaacggagatatatgtacccaccccgaacccataccaaaaccctacccgaatgtagaaaggtcatatttttgttttt-tttagggggttgataa 23045129  T
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaat 375  Q
    ||||||| ||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||| |||  |||||||||||||    
T  23045130 tgatatgtcatcttatttggtttgataattgtcatgatataagaactttcgttgatagttaaagcagcaaccgaattattcagtaaagaaatgttaaaat 23045229  T
Q  376 gaacgcatattcttcga 392  Q
    |||| || ||| |||||    
T  23045230 gaacacaaattgttcga 23045246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 76 - 382
Target Start/End: Complemental strand, 12915621 - 12915318
Alignment:
Q  76 ggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgg 175  Q
    |||||||| ||||||||||   ||||||| ||| |||| ||||||||| |||| || | ||||| |||||||||| |||||||||| ||||| |  | ||    
T  12915621 ggtacccgcccaaaccaacaccgatttgacgga-tttccccgatttgactggggttgggtatgggtttgggtttttcccgatttcataatacaggcatgg 12915523  T
Q  176 gacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataa 275  Q
    ||| | ||| | ||||| ||||||| || |||||  ||||||||||||||||||||||||||| |  ||||  ||| ||||||||||||| |||||||||    
T  12915522 gacaggtaatggggatacatgtacccactccgaagccatacccaaaccctacccgaatgtagaaagatcatgttttcgtttttgttgagggggttgataa 12915423  T
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaat 375  Q
    ||||||| ||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||    
T  12915422 tgatatgtcatgttatttggtttgatgattgtcatgatataagaactttcattgatggttaaaggagcaaccgaattattcggtaag--aatgttaaaat 12915325  T
Q  376 gaacgca 382  Q
    |||||||    
T  12915324 gaacgca 12915318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 146 - 382
Target Start/End: Complemental strand, 20634261 - 20634024
Alignment:
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaa-ccctacccgaatgtagagatgtc 244  Q
    ||||||||| |||| |||||||||||| | ||||| |||   ||||||||| ||  ||||||||| |||||||||| |||||||| ||| |||| |||||    
T  20634261 gttttccccaattttaaaatacggatatgagacgggtaatagggatatatgcactcaccccgaacccatacccaaaaccctacccaaatatagaaatgtc 20634162  T
Q  245 ataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagca 344  Q
    ||  ||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||    
T  20634161 atgtttttgtttttgttgagggggttgataatgatatgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggaaca 20634062  T
Q  345 accaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    |||||||||||||||| | ||||||| |||||| ||||    
T  20634061 accaaattattcggtaagtaaatgtttaaatgagcgca 20634024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 146 - 382
Target Start/End: Complemental strand, 20650375 - 20650138
Alignment:
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaa-ccctacccgaatgtagagatgtc 244  Q
    ||||||||| |||| |||||||||||| | ||||| |||   ||||||||| ||  ||||||||| |||||||||| |||||||| ||| |||| |||||    
T  20650375 gttttccccaattttaaaatacggatatgagacgggtaatagggatatatgcactcaccccgaacccatacccaaaaccctacccaaatatagaaatgtc 20650276  T
Q  245 ataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagca 344  Q
    ||  ||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||    
T  20650275 atgtttttgtttttgttgagggggttgataatgatatgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggaaca 20650176  T
Q  345 accaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    |||||||||||||||| | ||||||| |||||| ||||    
T  20650175 accaaattattcggtaagtaaatgtttaaatgagcgca 20650138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 68 - 375
Target Start/End: Complemental strand, 43523905 - 43523611
Alignment:
Q  68 tgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatac 167  Q
    ||||||| || |||| |||||||||| |  ||||||| ||| |||  ||||||||| || |||| | ||||  |||||||||||||||||||||||||||    
T  43523905 tgtccatgggcacccatccaaaccaatcccgatttgacggatttttcccgatttgactgagtttgggtatgagtttgggttttccccgatttcaaaatac 43523806  T
Q  168 ggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggag 267  Q
    || ||           ||| ||||||||||| | ||||||||| ||||||||||||||||||||||||| | | |||||| ||||  | ||||||||| |    
T  43523805 gggta-----------acggggatatatgtatccaccccgaactcatacccaaaccctacccgaatgtaaaaaggtcatattttt--tgttgttgagggg 43523719  T
Q  268 gttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaat 367  Q
    |||||||||||||| ||||||||||||| || |||||| |||||||||| |||||||||||||||||||||||||||| | ||||||||| || | ||||    
T  43523718 gttgataatgatataccatgttatttggattgataattttcatgatataagaactttcattgatagttaaaggagcaatcgaattattcgataagaaaat 43523619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 147 - 368
Target Start/End: Complemental strand, 34259333 - 34259118
Alignment:
Q  147 ttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcat 246  Q
    |||||| ||||||||||||| || ||| |||||| ||||||||||||||||||| |||| ||||  ||| ||||||||| |||||||||||| | |||||    
T  34259333 ttttcctcgatttcaaaatatgggtaccggacgggtaacgaggatatatgtacccaccctgaacctatatccaaaccctccccgaatgtagaaaagtcat 34259234  T
Q  247 aattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaac 346  Q
    |      |||||||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  34259233 a------tttttgttgaggggattgataatgatatgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggaacaac 34259140  T
Q  347 caaattattcggtatggaaatg 368  Q
    | |||| ||| ||| |||||||    
T  34259139 cgaatttttcagtaaggaaatg 34259118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 154 - 382
Target Start/End: Complemental strand, 12251041 - 12250816
Alignment:
Q  154 cgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttg 253  Q
    |||||||||||||||| ||| |||||| ||||   |||||||||||| || | |||| ||||||||||||||||| ||||||||| | || ||  || |     
T  12251041 cgatttcaaaatacgggtaccggacgggtaacagagatatatgtacccactctgaacccatacccaaaccctacctgaatgtagaaaggt-atgtttat- 12250944  T
Q  254 tttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaatta 353  Q
    |||||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || | |||||    
T  12250943 tttttgttgaggggattgataatgatatgccatattatttggtttgataattgtcatgatataagaactttcattgatagttaaaggagtaaacgaatta 12250844  T
Q  354 ttcggtatggaaatgttaaaatgaacgca 382  Q
    ||  |||  ||||||||||||||| ||||    
T  12250843 tttagta-agaaatgttaaaatgagcgca 12250816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 177 - 375
Target Start/End: Original strand, 18116547 - 18116743
Alignment:
Q  177 acggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataat 276  Q
    |||| ||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||| | | ||||| ||||| || ||||||||| ||||||||||    
T  18116547 acgggtaacggggatatatgtatccaccccgaactcatacccaaaccctacccgaatgtaaaaaggtcat-atttttttgttgttgagggggttgataat 18116645  T
Q  277 gatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaat 375  Q
    ||||| |||||||| |||| || |||||| |||||||||| ||||||| |||||||||||||||||||| | ||||||||| |  | ||||||||||||    
T  18116646 gatataccatgtta-ttggattgataattctcatgatataagaacttttattgatagttaaaggagcaatcgaattattcgattagaaaatgttaaaat 18116743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 12712562 - 12712673
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||| ||| ||||| ||||||||||||||||||||||||||| |    
T  12712562 tttgggttttctccgatttcaaaatacgggtacgggacggataacggagatatatgtacccacctcgaacccatacccaaaccctacccgaatgtagaaa 12712661  T
Q  241 tgtcataatttt 252  Q
    ||||||| ||||    
T  12712662 tgtcatattttt 12712673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 252
Target Start/End: Original strand, 12773826 - 12773937
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagaga 240  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||  |||||||||||| ||| ||||| ||||| ||||||||||||||||||||| |    
T  12773826 tttgggttttctccgatttcaaaatacgggtacgggacggataacggagatatatgtacccacctcgaacccatactcaaaccctacccgaatgtagaaa 12773925  T
Q  241 tgtcataatttt 252  Q
    ||||||| ||||    
T  12773926 tgtcatattttt 12773937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 249 - 382
Target Start/End: Complemental strand, 10834187 - 10834054
Alignment:
Q  249 ttttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaacca 348  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||| | |||||||| | |||| ||||||||| ||||||||| ||||      
T  10834187 ttttgtttttgttaagggggttgataatgatatgtcatgttatttggtttgataactatcatgataaatgaacattcattgatggttaaaggaacaactg 10834088  T
Q  349 aattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||||||||  |||| |||||||||| ||||    
T  10834087 aattattcggtaaagaaacgttaaaatgagcgca 10834054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 45 - 221
Target Start/End: Original strand, 28568930 - 28569106
Alignment:
Q  45 agtaggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttg 144  Q
    |||||| |||| |||||| | ||||| | | |||| ||| |||||||| ||| ||||||| ||  |||| | ||||||| ||||||| | ||||  ||||    
T  28568930 agtaggcatggcaacaaaacccatgttcgtgggtagccgcccaaaccatcctcgatttgacgggttttccctgatttgactgggtttgggtatgagtttg 28569029  T
Q  145 ggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaa 221  Q
    | ||||||||||||||||||| ||| |||||||||| ||||| ||||||| ||||| ||||||||| ||||||||||    
T  28569030 gattttccccgatttcaaaatgcgggtacgggacgggtaacggggatataggtacccaccccgaacccatacccaaa 28569106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 141 - 238
Target Start/End: Original strand, 32574943 - 32575040
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
    |||||||||||||||||||||||| || ||||||||| || ||||  ||||||||||||| | ||||||| || ||||||||||  ||||||||||||    
T  32574943 tttgggttttccccgatttcaaaacacagatacgggatgggtaacatggatatatgtacccatcccgaacccaaacccaaacccgccccgaatgtaga 32575040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 12712686 - 12712750
Alignment:
Q  318 gaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||||||    
T  12712686 gaactttcattgatagttagaggagcaaccgaattattcggtaagaaaatgttaaaatgaacgca 12712750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 4583234 - 4583120
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||||||||||| ||||||| | |||||||||||||||||||||| |||| || ||||||| ||||| | ||||| || || ||||| ||    
T  4583234 tttccccgttttgattgggtttggatatgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggttcccaccccaaa 4583135  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||| ||||    
T  4583134 cccatacccataccc 4583120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 4920941 - 4920827
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||| ||||| ||||||| | ||||| | ||||||||||||||| |||||| |||| || ||||||| ||||| | ||||| ||| | ||||||||    
T  4920941 tttctccgttttgactgggtttggttatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaa 4920842  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  4920841 cccatacccaaaccc 4920827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 234
Target Start/End: Complemental strand, 6810242 - 6810149
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatg 234  Q
    ||||||||||||||||||| | || |||| ||||| |||| ||||||||||||| ||||  ||||||||| |||||||||||||  ||||||||    
T  6810242 tttgggttttccccgattttagaacacgggtacggaacgggtaacgaggatataagtactcaccccgaacccatacccaaacccatcccgaatg 6810149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 12773954 - 12774014
Alignment:
Q  322 tttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||||||||||| |||||||||| |||||||||||| | |||||||||||||||||||    
T  12773954 tttcattgatagttagaggagcaaccgaattattcggtaagaaaatgttaaaatgaacgca 12774014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 137 - 218
Target Start/End: Original strand, 10822527 - 10822608
Alignment:
Q  137 tggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||||||||||||| |||||||||||| |||| ||  |||||| ||||| || |||||||||| ||||||||| |||||||    
T  10822527 tggatttgggttttctccgatttcaaaacacgggtataggacgggtaacggggttatatgtacccaccccgaacccataccc 10822608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 206
Target Start/End: Original strand, 33727964 - 33728071
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| |||| ||| ||||||||||||| ||||||| | ||| ||||||||||| |||||| |||| || ||||||| ||||| | ||||| |||    
T  33727964 atttgacggattttccccgttttgattgggtttggatatgggtatggattttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggta 33728063  T
Q  199 ccaacccc 206  Q
    || |||||    
T  33728064 cccacccc 33728071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Original strand, 5908671 - 5908776
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||||||||||| | ||||| | || |||||||||||| || ||| |||| || ||||||| ||||| | ||||||||||  ||||| ||| |||||||    
T  5908671 tttgattgggtttgggtatgggtatgagttttccccgatctcgaaacacgggtatgggacgggtaacgggtatatatgtacacaccccaaacccataccc 5908770  T
Q  219 aaaccc 224  Q
    ||||||    
T  5908771 aaaccc 5908776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 16311276 - 16311372
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacata 215  Q
    ||||||||||||| ||||||  |||| |||||  |||||||||||| |||  |||| ||||||||||  ||||||| ||||| ||||||||| ||||    
T  16311276 tttgattgggtttggatatgagtttgagttttttccgatttcaaaacacgagtacgagacggataacagggatataggtacccaccccgaacccata 16311372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 221
Target Start/End: Original strand, 20973470 - 20973581
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | |||||||||||||||||  ||| |||| || |||| || ||||| | ||||| ||||| ||||||||    
T  20973470 tttccccgttttgactgggtttggttatgggtatgggttttccccgattttcaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaa 20973569  T
Q  210 cacatacccaaa 221  Q
    | ||||||||||    
T  20973570 cccatacccaaa 20973581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 17853267 - 17853380
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||||||||||| | ||||||| |||||||||||||||||| ||| |||| || ||||||| |||||   |||||  |||| || |||||    
T  17853267 tttccccgttttgattgggtttgggtatggatatgggttttccccgatttc-aaacacgggtatgggacgggtaacggatatatagatacccactccgaa 17853365  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||| ||||    
T  17853366 cccatacccataccc 17853380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 235
Target Start/End: Original strand, 38006474 - 38006568
Alignment:
Q  141 tttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgt 235  Q
    |||||||||||||| |||||||||||||| || ||||||  ||||    ||||| ||||| ||||||||| |||||||||| ||  |||||||||    
T  38006474 tttgggttttccccaatttcaaaatacgggtatgggacgcgtaacagatatataggtacccaccccgaacccatacccaaatccgtcccgaatgt 38006568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 17153241 - 17153156
Alignment:
Q  153 ccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtaga 238  Q
    ||||||| |||| | || ||||||||||||||| | |||||||||||  | ||| ||| |||||||||||||  ||||||||||||    
T  17153241 ccgattttaaaacatgggtacgggacggataactatgatatatgtactcatcccaaacccatacccaaacccgtcccgaatgtaga 17153156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 27900388 - 27900501
Alignment:
Q  123 attgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    ||||||||| ||||| | |||| ||||| ||||||||||||| | || || ||||||| ||| | ||||||| ||||| | | ||||| ||||||||||     
T  27900388 attgggtttggatataggtttgagtttttcccgatttcaaaacatgggtatgggacgggtaatgtggatataggtacccatctcgaacccatacccaaat 27900487  T
Q  223 cctacccgaatgta 236  Q
    ||  ||||||||||    
T  27900488 ccgccccgaatgta 27900501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 22694913 - 22694989
Alignment:
Q  148 tttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    |||||||||| ||||||||||| || ||||||  ||||| | ||| | ||||| ||||||||| |||||||||||||    
T  22694913 tttccccgatctcaaaatacgggtatgggacgactaacgggtatagaggtacccaccccgaacccatacccaaaccc 22694989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 10834634 - 10834541
Alignment:
Q  85 ccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacgg 180  Q
    ||||||||| || ||||||||||| ||| |||||||||| | ||||||| ||||| ||||| |||| ||| |||||| |||| || ||||||||||    
T  10834634 ccaaaccaatctcgatttgatgga-tttttccgatttgactaggttttggtatgggtttggatttttcccaatttcataata-gggtacgggacgg 10834541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 27088477 - 27088543
Alignment:
Q  285 atgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    ||||||||| |||| |||||||| ||| ||||  |||| ||||||||| ||||||||||||| ||||    
T  27088477 atgttattttgtttgataattgttatgttataaaaactatcattgatatttaaaggagcaactaaat 27088543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 27302746 - 27302808
Alignment:
Q  147 ttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||||||||||||| ||||||| | |||||||||| |  ||||| ||||| ||||||||    
T  27302746 ttttccccgatttcaaaacacggatatgagacggataacaaatatataggtacccaccccgaa 27302808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 38973037 - 38972923
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||  |||||||||| ||||||||||||| | || || ||||  | ||||| | ||||| ||||| ||||||||    
T  38973037 tttccccgttttgactgggtttaggtatgagtttgggtttttcccgatttcaaaacatgggtatgggataggtaacgggaatataggtacccaccccgaa 38972938  T
Q  210 cacatacccaaaccc 224  Q
    | ||||| |||||||    
T  38972937 cccatactcaaaccc 38972923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 15890288 - 15890208
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||| |||||||||||| |||| || ||||||| ||||| | ||||| ||||| | ||||||| |||||||| ||||    
T  15890288 tgggttttctccgatttcaaaacacgggtatgggacgggtaacgggtatataggtaccca-cccgaacccatacccataccc 15890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 30996678 - 30996597
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||| ||||||| |||| |||  || ||||| | ||||| | ||||| ||||| |||||||||||| ||||||||||    
T  30996678 tgggttttctccgattttaaaacacgagtatgggacaggtaacgggtatataggtacccaccccgaacacacacccaaaccc 30996597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 35193990 - 35194091
Alignment:
Q  137 tggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgta 236  Q
    ||||||||||| ||| | | ||| |||| |||| || ||||||| ||||| | ||||| ||||| ||||| ||| ||||| |||||||  ||||||||||    
T  35193990 tggatttgggtattctctgtttttaaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaactcatactcaaacccgtcccgaatgta 35194089  T
Q  237 ga 238  Q
    ||    
T  35194090 ga 35194091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 40517912 - 40517807
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| | |||||||||||||||  ||||| |||| || |||| || ||||| | |||||  |||| ||||||||| ||||| |    
T  40517912 tttgactgggtttgggtatgggtatgggttttccccgatcccaaaacacgggtatgggatgggtaacgggtatatagttacccaccccgaacccatactc 40517813  T
Q  219 aaaccc 224  Q
    ||||||    
T  40517812 aaaccc 40517807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 145; Significance: 3e-76; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 113 - 377
Target Start/End: Complemental strand, 3081 - 2817
Alignment:
Q  113 ctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacac 212  Q
    ||||||||||| ||||||| | ||||  ||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||||||| ||||||||| |    
T  3081 ctccgatttgactgggtttgggtatgagtttgggttttccccgatttcaaaatacgggtacaggacggataactgggatatatgtacccaccccgaaccc 2982  T
Q  213 atacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatga 312  Q
    |||| ||||||||||||||||||||| ||||||    |||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  2981 atactcaaaccctacccgaatgtagaaatgtcacttgtttgtttttgtttaggaggttgataattatatgccatgttatttgatttgataattgtcatga 2882  T
Q  313 tataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatga 377  Q
    | ||  ||||||||||||||||||||  ||||||||||||||| ||||  |||||| ||||||||    
T  2881 tttaataactttcattgatagttaaaaaagcaaccaaattatttggtaatgaaatgctaaaatga 2817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 135 - 378
Target Start/End: Original strand, 55896 - 56138
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatg 234  Q
    |||||||||||||||||||| ||||||||||| || ||| ||| || ||||  ||||||||||||| ||||||||  |||||||||||||||||||||||    
T  55896 tatggatttgggttttccccaatttcaaaatatgggtacaggaggg-taacagggatatatgtacccaccccgaatccatacccaaaccctacccgaatg 55994  T
Q  235 tagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagt 334  Q
    |||| |  ||||| ||||||||||||||||| |||| |||||||||| |||||||||||||||| ||||||||| |||||||  |||||||||||||||     
T  55995 tagaaagatcatatttttgtttttgttgagggggttcataatgatattccatgttatttggtttgataattgtcctgatataaaaactttcattgatagg 56094  T
Q  335 taaaggagcaaccaaattattcggtatggaaatgttaaaatgaa 378  Q
    ||||| |||||||||||||||||||| |||||||||||||||||    
T  56095 taaagaagcaaccaaattattcggtaaggaaatgttaaaatgaa 56138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 8e-71; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 71 - 382
Target Start/End: Original strand, 1772333 - 1772644
Alignment:
Q  71 ccataggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgga 170  Q
    |||| |||||| | ||||||||| |  ||||||| ||| |||| ||||||||| ||||| | | ||||| |||||||||||  |||||| |||||||||     
T  1772333 ccatgggtacctgcccaaaccaatcccgatttgacggattttccccgatttgactgggtctgggtatggttttgggttttcttcgattttaaaatacggg 1772432  T
Q  171 tacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggtt 270  Q
    ||| || ||  ||| | ||||||||||||| ||||||||| ||||| ||||||||||||||||||||| |   |||| ||||||||||||| ||| ||||    
T  1772433 tacagggcgagtaatgcggatatatgtacccaccccgaactcatacacaaaccctacccgaatgtagaaagaccatatttttgtttttgttaagggggtt 1772532  T
Q  271 gataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgtt 370  Q
    |||||||||||| |||||||||| |||| |||||| |||||||||| ||||||| ||||||| |||||||||||||| |||||||||||| |||||||||    
T  1772533 gataatgatatgtcatgttattttgtttgataattatcatgatataagaacttttattgatacttaaaggagcaaccgaattattcggtaaggaaatgtt 1772632  T
Q  371 aaaatgaacgca 382  Q
     |||||||||||    
T  1772633 gaaatgaacgca 1772644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 192 - 382
Target Start/End: Complemental strand, 2487828 - 2487638
Alignment:
Q  192 atatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttat 291  Q
    ||||||||| ||||||||| |||||||||||||||||  |||||||| | |||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  2487828 atatgtacccaccccgaacccatacccaaaccctacctaaatgtagaaaggtcatatttttgtttttgttaaggaggttgataatgatatgccatgttat 2487729  T
Q  292 ttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||| ||   |||| ||||||||| ||||    
T  2487728 ttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaaccgaattattcgataacaaaattttaaaatgagcgca 2487638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 153 - 382
Target Start/End: Original strand, 40796153 - 40796382
Alignment:
Q  153 ccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataatttt 252  Q
    ||||||||||||||||| |||||||||| ||| ||||||| ||||||| ||||| ||  |||||||||||| |||| ||||||||| | |||||| ||||    
T  40796153 ccgatttcaaaatacgggtacgggacgggtaatgaggatacatgtacccaccccaaagtcatacccaaaccttaccggaatgtagaaaggtcatattttt 40796252  T
Q  253 gtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaatt 352  Q
     |||||||| ||| |||||||||||||||| | ||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  40796253 atttttgttaagggggttgataatgatatgtcctgttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaaccgaatt 40796352  T
Q  353 attcggtatggaaatgttaaaatgaacgca 382  Q
    ||||| ||   ||||| |||||||| ||||    
T  40796353 attcgataacaaaatgctaaaatgagcgca 40796382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 254 - 382
Target Start/End: Complemental strand, 23330135 - 23330007
Alignment:
Q  254 tttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaatta 353  Q
    |||||||||||| |||| ||||||||||| ||||||||| ||||| ||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||    
T  23330135 tttttgttgagggggttaataatgatatgtcatgttattcggtttgataattgtcatgatataagaacttttattgatagttaaacgagcaactaaatta 23330036  T
Q  354 ttcggtatggaaatgttaaaatgaacgca 382  Q
    ||||||| |||||||||||||||| ||||    
T  23330035 ttcggtaaggaaatgttaaaatgagcgca 23330007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 116 - 298
Target Start/End: Original strand, 35687470 - 35687652
Alignment:
Q  116 cgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacata 215  Q
    |||||||| |||||||   ||||  |||| |||||||||||||||| ||||||| |||| ||||| ||||   |||||||||||| | ||| ||  ||||    
T  35687470 cgatttgactgggtttgagtatgagtttgagttttccccgatttcataatacgggtacgagacgggtaactgtgatatatgtacctatcccaaatccata 35687569  T
Q  216 cccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttatttggttt 298  Q
    || |||||||||||||||||||| |||||||| ||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  35687570 ccaaaaccctacccgaatgtagaaatgtcatatttttgtttttgttgagtgggttgataatgatatgtcatgttatttggttt 35687652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 224
Target Start/End: Original strand, 30616279 - 30616368
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||| |||||||| ||||| || | ||||||||| |||||||| ||||    
T  30616279 tatgggtttgggttttccccgatttcaaaacacggatatgggacgggtaacgaggttatatataaccaccccgaacccatacccataccc 30616368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 4557287 - 4557389
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| ||||||||||||||| |||||||| | || || ||||||| ||||||| ||||| ||||| ||||||||| |||||||    
T  4557287 tttgactgggtttgggtatgggtttgggttttccccgttttcaaaacatgggtatgggacgggtaacgagtatataggtacccaccccgaacccataccc 4557386  T
Q  219 aaa 221  Q
    |||    
T  4557387 aaa 4557389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 197
Target Start/End: Complemental strand, 2490417 - 2490333
Alignment:
Q  113 ctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgt 197  Q
    ||||||||||| ||||||| ||||||| |||| |||||||||||||||||||||||| ||| | |||| ||| | ||||||||||    
T  2490417 ctccgatttgactgggtttggatatgggtttgagttttccccgatttcaaaatacgggtacagaacgggtaatggggatatatgt 2490333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 222
Target Start/End: Original strand, 4016042 - 4016129
Alignment:
Q  135 tatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    ||||| |||||||||||||||||||||||| | || || ||||||||||||| | ||||| ||||| || |||||| |||||||||||    
T  4016042 tatgggtttgggttttccccgatttcaaaacatgggtatgggacggataacgggtatataggtacccactccgaacccatacccaaac 4016129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 39655246 - 39655360
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||||||||||| | ||||| | ||||||||||||||| |||||| |||| || ||||||| ||||  | ||||| ||||| ||||| ||    
T  39655246 tttccccgttttgattgggtttgggtatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaa 39655345  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  39655346 cccatacccaaaccc 39655360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 49580179 - 49580065
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||||||||| |||||| |||| || ||||||| ||||||| ||||| ||||| ||| ||||    
T  49580179 tttccccgttttgactgggtttgggtatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgagtatataggtacccacctcgaa 49580080  T
Q  210 cacatacccaaaccc 224  Q
    | ||||| |||||||    
T  49580079 cccatactcaaaccc 49580065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 233
Target Start/End: Original strand, 10043221 - 10043378
Alignment:
Q  76 ggtacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgg 175  Q
    |||||||| ||| |||||||   |||||| ||  |||||||  ||||| ||||||| | ||||| ||||||||||||| | |||||||| | || || ||    
T  10043221 ggtacccgaccataccaaccccaatttgacgggttttctccactttgactgggtttgggtatgggtttgggttttccctggtttcaaaacatgggtatgg 10043320  T
Q  176 gacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaat 233  Q
    ||||| ||||| || |||||| ||| ||||||||| |||||||| ||||  |||||||    
T  10043321 gacgggtaacggggttatatgcacccaccccgaacccatacccatacccatcccgaat 10043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 34026060 - 34025955
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| ||||||| | |||||||||||||||||||||| || | || ||||||| ||||||| ||||| ||  | ||||||||| |||||||    
T  34026060 tttgactgggtttggatatgggtatgggttttccccgatttcaaaacacaggtatgggacgggtaacgagtatataggtttccaccccgaactcataccc 34025961  T
Q  219 aaaccc 224  Q
    | ||||    
T  34025960 ataccc 34025955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 44172708 - 44172627
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||| |||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  44172708 tgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaaccc 44172627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 44179408 - 44179327
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||||||||||||||| |||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  44179408 tgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaaccc 44179327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 99 - 224
Target Start/End: Original strand, 48390779 - 48390904
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| |||| ||| ||||| ||||||| | ||||| | |||||||||||||||||||||| |||| || ||||||| ||||| | ||||| |||    
T  48390779 atttgacggattttccccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaacgggaatataggta 48390878  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || | || |||| |||||||| ||||    
T  48390879 cccatcctgaacccatacccataccc 48390904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 378
Target Start/End: Complemental strand, 14208372 - 14208270
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggt-atggaaatgttaaaa 374  Q
    |||||| | |||||||||||||| |||||||||||| ||||  || | ||||||||| ||||||||||||| |||| |||| || | |||||||||||||    
T  14208372 tgatatactatgttatttggtttgataattgtcatgttata-aaaatgtcattgatatttaaaggagcaacaaaatcattcagtcaaggaaatgttaaaa 14208274  T
Q  375 tgaa 378  Q
    ||||    
T  14208273 tgaa 14208270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 20087123 - 20087053
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgg 169  Q
    |||||| ||| |||||||| ||||| ||||||| ||||||| | |||||||||||||||||||||| ||||    
T  20087123 atttgacggattttctccgttttgactgggtttggatatgggtatgggttttccccgatttcaaaacacgg 20087053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 29284451 - 29284337
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||||||| ||||| ||||||| | ||||| | |||||||| |||||| || ||| |||| || ||||||| ||||| | ||||| ||||| | ||||||    
T  29284451 tttctccgttttgactgggtttgggtatgggtatgggtttttcccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccagcccgaa 29284352  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  29284351 cccatacccaaaccc 29284337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 52198302 - 52198156
Alignment:
Q  78 tacccgtccaaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacggga 177  Q
    |||||| ||||||||| | | |||||| ||  ||| || | ||||| ||||||| | ||||| | |||||||| |||||| |||||| || | || ||||    
T  52198302 tacccgcccaaaccaaacctaatttgacgggttttttctgttttgactgggtttgggtatgggtatgggtttttcccgatctcaaaacacaggtatggga 52198203  T
Q  178 cggataacgaggatatatgtaccaaccccgaacacatacccaaaccc 224  Q
    ||| ||||| | ||||| ||||| ||||||||| |||||||||||||    
T  52198202 cgggtaacgggtatataggtacccaccccgaacccatacccaaaccc 52198156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 19111840 - 19111735
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||||||||||| | ||||  |||| ||||| ||||||||||||| |||| ||||||| |||||||| | ||||| ||||| ||||  ||| ||| |||    
T  19111840 tttgattgggtttgggtatgagtttgagtttttcccgatttcaaaacacgggtacgggatggataacgggtatataagtacccaccctaaacccatgccc 19111741  T
Q  219 aaaccc 224  Q
    ||||||    
T  19111740 aaaccc 19111735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 34154540 - 34154415
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| |||| ||| ||||| ||||||| ||||||| | || ||||||||||||||||||| | || || |  |||| |||| || ||||| |||    
T  34154540 atttgacggattttccccgttttgactgggtttggatatgggtatgtgttttccccgatttcaaaacatgggtatgaaacgggtaacaagaatataggta 34154441  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || ||||||||| |||||||| ||||    
T  34154440 cccaccccgaacccatacccataccc 34154415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 39728797 - 39728672
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| |||| ||| ||||| ||||||| | ||||  | | |||||||| |||| ||||||||||| || |||| || ||||| | ||||| |||    
T  39728797 atttgacggattttccccgttttgactgggtttgggtatgagtataggttttcctcgatctcaaaatacgggtatgggatgggtaacgggtatataagta 39728698  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
    || ||||||||| |||||||||||||    
T  39728697 cccaccccgaacccatacccaaaccc 39728672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 42758346 - 42758277
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaa 345  Q
    |||||||||||||||||| |||| ||||||| |||| ||||  |||| ||||||||| ||||||||||||    
T  42758346 tgatatgccatgttattttgtttgataattgccatgttataaaaactatcattgatatttaaaggagcaa 42758277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 224
Target Start/End: Complemental strand, 44639380 - 44639275
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||| ||||||| | ||||| | |||||||||||  || |||||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||||    
T  44639380 tttgactgggtttgggtatgggtatgggttttcccatatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccc 44639281  T
Q  219 aaaccc 224  Q
    ||||||    
T  44639280 aaaccc 44639275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 23546948 - 23547027
Alignment:
Q  143 tgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    ||||||||||||||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||| |||||||||||    
T  23546948 tgggttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaac 23547027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 7469751 - 7469865
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||||| ||| || ||| |||| || ||||||| ||||| | ||||| ||||| ||||||||    
T  7469751 tttccccgttttgactgggtttgggtatgggtatgggttttccctgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaa 7469850  T
Q  210 cacatacccaaaccc 224  Q
    | ||||| |||||||    
T  7469851 cccatacacaaaccc 7469865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 34119762 - 34119660
Alignment:
Q  119 tttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacataccc 218  Q
    ||||||||||||| | ||||  |||| ||||| |||||||| |||| |||| || | ||||||||||  | ||||| ||||| ||||||||| |||||||    
T  34119762 tttgattgggtttgggtatgagtttgagtttttcccgattttaaaacacgggtatgagacggataacaggtatataggtacccaccccgaacccataccc 34119663  T
Q  219 aaa 221  Q
    |||    
T  34119662 aaa 34119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 44252862 - 44252748
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||| | ||||||||||||||| || ||| |||| || ||||||  ||||  | ||||| ||||| ||||||||    
T  44252862 tttccccgttttgactgggtttgggtatgggtatgggttttccccgatctcgaaacacgggtatgggacgtgtaacaggtatataggtacccaccccgaa 44252763  T
Q  210 cacatacccaaaccc 224  Q
    | |||||||||||||    
T  44252762 cccatacccaaaccc 44252748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 44953408 - 44953522
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | | ||| | ||||||||||||||| |||||| |||| || ||||||| ||||| | ||||| ||||  ||||||||    
T  44953408 tttccccgttttgactgggtttgggtttgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggtactcaccccgaa 44953507  T
Q  210 cacatacccaaaccc 224  Q
    | ||||| |||||||    
T  44953508 ctcatactcaaaccc 44953522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 345
Target Start/End: Complemental strand, 30682793 - 30682724
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaa 345  Q
    ||||||| |||||||||| |||| ||||| |||||| ||||  |||| ||||||||| ||||||||||||    
T  30682793 tgatatgtcatgttattttgtttgataatggtcatgttataaaaactatcattgatatttaaaggagcaa 30682724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Complemental strand, 53631876 - 53631801
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    |||||||||||||||||| |||| ||||||| | || ||||  ||||  |||||||| ||||||||||||| ||||    
T  53631876 tgatatgccatgttattttgtttgataattgccgtgttataaaaactaccattgatatttaaaggagcaactaaat 53631801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 224
Target Start/End: Original strand, 3385829 - 3385943
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||||||||  ||||  || ||||||||| |||| |||||||| | ||||||||||||| ||| | ||| ||||    
T  3385829 tttccccgctttgactgggtttaggtatggatttgaatttttacccatttcaaaacacgggtacgggacaggtaacgaggatataggtagccaccacgaa 3385928  T
Q  210 cacatacccaaaccc 224  Q
      |||||| ||||||    
T  3385929 tccataccaaaaccc 3385943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 110 - 224
Target Start/End: Complemental strand, 42243502 - 42243388
Alignment:
Q  110 tttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaa 209  Q
    |||| ||| ||||| ||||||| | ||||  |||||||||| ||||||||||| | |||| || | || || |||||||||||||| || | ||||| ||    
T  42243502 tttccccggtttgactgggtttgggtatgagtttgggtttttcccgatttcaatacacgggtatgagatgggtaacgaggatatatttatccaccccaaa 42243403  T
Q  210 cacatacccaaaccc 224  Q
      |||||||||||||    
T  42243402 ttcatacccaaaccc 42243388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 42758500 - 42758375
Alignment:
Q  99 atttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgta 198  Q
    |||||| ||| |||| ||| ||| | ||||||| | ||||  ||||||||| |||||||||||||| || | || ||||||| ||||  | ||||| |||    
T  42758500 atttgacggattttccccgttttaactgggtttgggtatgagtttgggtttcccccgatttcaaaacacaggtatgggacgggtaacaggtatataggta 42758401  T
Q  199 ccaaccccgaacacatacccaaaccc 224  Q
       ||||||||| |||||||||||||    
T  42758400 tgcaccccgaacccatacccaaaccc 42758375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 47 - 377
Target Start/End: Original strand, 128030 - 128361
Alignment:
Q  47 taggtatggtaacaaagctcatgtccataggtacccgtccaaaccaaccttgatttgatggactttctccga-tttgattgggttttgatatggatttgg 145  Q
    |||| |||||||||||   | |||||||||||| | |||||||||||||| |||||| |||  ||| | ||| |||||||||||||   ||||  |||||    
T  128030 taggcatggtaacaaaatccgtgtccataggtatctgtccaaaccaacctcgatttggtgggtttttttcgaatttgattgggtttgagtatgagtttgg 128129  T
Q  146 gttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtca 245  Q
    |||||  || |||||| ||||||| |||||||||| ||| | ||||||||||||| ||||||||| |||||||||||||||||| |||||||| | ||||    
T  128130 gttttttccaatttcataatacgggtacgggacgggtaatggggatatatgtacccaccccgaacccatacccaaaccctacccaaatgtagaaaggtca 128229  T
Q  246 taattttgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaa 345  Q
    || |||| |||||||||||| |||||| ||||||||| ||||||||||||||| |||  | || ||||||| ||| ||||||| || |||||||||||||    
T  128230 tatttttatttttgttgagggggttgaaaatgatatgtcatgttatttggtttgatagctatcttgatataagaaatttcattaatggttaaaggagcaa 128329  T
Q  346 ccaaattattcggtatggaaatgttaaaatga 377  Q
    || |||| ||||||| ||||||||||||||||    
T  128330 cctaatttttcggtaaggaaatgttaaaatga 128361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 87 - 377
Target Start/End: Original strand, 105419 - 105709
Alignment:
Q  87 aaaccaaccttgatttgatggactttctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacg 186  Q
    |||||||| | ||||||||||  ||| | ||||||||||||||||   |||||  |||| ||||  ||||||||  ||||||| |||||||||| ||||     
T  105419 aaaccaacttcgatttgatgggtttttttcgatttgattgggtttgagtatgggattggattttttccgatttcttaatacgggtacgggacgggtaaca 105518  T
Q  187 aggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccat 286  Q
     ||||||||||||| ||||||||| |||||||||||||||||| ||||| || | |||||  |||| |||||||||||| |||||| ||||||||| |||    
T  105519 gggatatatgtacccaccccgaacccatacccaaaccctacccaaatgttgaaaggtcatgtttttatttttgttgagggggttgaaaatgatatgtcat 105618  T
Q  287 gttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaatga 377  Q
    |||||||||||| |||  | || ||||||| ||| |||||||||| ||||| ||||||||| || | ||||||| ||||||||||||||||    
T  105619 gttatttggtttgatagctatcttgatataagaaatttcattgatggttaagggagcaaccgaacttttcggtaaggaaatgttaaaatga 105709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 71 - 377
Target Start/End: Complemental strand, 70250 - 69943
Alignment:
Q  71 ccataggtacccgtccaaaccaaccttgatttgatggactttct-ccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacgg 169  Q
    ||||||||||| | |||||||||||| ||||||| ||| ||| | ||||||| ||| |||||   ||||  ||||| |||| || ||||||| |||||||    
T  70250 ccataggtacctgcccaaaccaacctcgatttgacggatttttttccgatttaatttggtttgagtatgagtttggatttttcctgatttcataatacgg 70151  T
Q  170 atacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggt 269  Q
     |||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||| ||||| || | |||||  |||| |||||||||||| |||    
T  70150 gtacgggacgggtaacgaggatatatgtacccaccccaaacccatacccaaaccctacccaaatgttgaaaggtcatgtttttatttttgttgagggggt 70051  T
Q  270 tgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgt 369  Q
    ||| ||||||||| ||||||||||||||| |||  | || ||||||| ||| |||||||||| ||||| ||||||||| || | ||||||| ||||||||    
T  70050 tgaaaatgatatgtcatgttatttggtttgatagctatcttgatataagaaatttcattgatggttaagggagcaaccgaacttttcggtaaggaaatgt 69951  T
Q  370 taaaatga 377  Q
    ||||||||    
T  69950 taaaatga 69943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 152 - 379
Target Start/End: Complemental strand, 17040 - 16814
Alignment:
Q  152 cccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaaccctacccgaatgtagagatgtcataattt 251  Q
    |||||||||||||||||  || ||||||| | ||| ||||||||||||| ||||||||| |||| ||||||| ||||||||| |||| | |||||  |||    
T  17040 cccgatttcaaaatacgtgtatgggacgggtgacggggatatatgtacccaccccgaactcatatccaaaccatacccgaatctagaaaggtcatttttt 16941  T
Q  252 tgtttttgttgaggaggttgataatgatatgccatgttatttggtttcataattgtcatgatataggaactttcattgatagttaaaggagcaaccaaat 351  Q
    | ||||| |||||| | |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||| || ||||| |||    
T  16940 t-tttttattgaggggattgataatgatatgccatgttatttggtttgataattatcatgatataagaactttcattgatagttaaaagaccaaccgaat 16842  T
Q  352 tattcggtatggaaatgttaaaatgaac 379  Q
    |||| | ||   ||||||||||||||||    
T  16841 tatttgataaaaaaatgttaaaatgaac 16814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 17100 - 17052
Alignment:
Q  79 acccgtccaaaccaaccttgatttgatggactttctccgatttgattgg 127  Q
    ||||| |||||||||| ||||||||| ||| ||| ||||||||||||||    
T  17100 acccgcccaaaccaactttgatttgacggattttttccgatttgattgg 17052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 113 - 293
Target Start/End: Complemental strand, 211476 - 211297
Alignment:
Q  113 ctccgatttgattgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacac 212  Q
    ||||||||||| || |||| | ||||| ||||||||||| ||||||||||||||||| |||| ||||| ||||  ||||||||||||| ||||||||| |    
T  211476 ctccgatttgactgagtttgggtatgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaaccc 211377  T
Q  213 atacccaaaccctacccgaatgtagagatgtcataattttgtttttgttgaggaggttgataatgatatgccatgttattt 293  Q
    |||||||||| ||||| ||||||||| |||||||| |||||||||| || |||  ||||||||||||||||||||||||||    
T  211376 atacccaaactctacctgaatgtagaaatgtcatatttttgttttt-tttagggagttgataatgatatgccatgttattt 211297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 211287 - 211231
Alignment:
Q  319 aactttcattgatagttaaaggagcaaccaaattattcggtatggaaatgttaaaat 375  Q
    ||||||||| ||||||||||||||||||| |||||||||||| | ||||| ||||||    
T  211287 aactttcatcgatagttaaaggagcaaccgaattattcggtaagaaaatgataaaat 211231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 222
Target Start/End: Complemental strand, 33494 - 33396
Alignment:
Q  124 ttgggttttgatatggatttgggttttccccgatttcaaaatacggatacgggacggataacgaggatatatgtaccaaccccgaacacatacccaaac 222  Q
    |||||||| | ||||| |||||||||||||||||||||||| |||| || ||||||| ||||| | ||||||||||| ||||||||| |||||||||||    
T  33494 ttgggtttgggtatgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtatatatgtacccaccccgaacccatacccaaac 33396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 356
Target Start/End: Complemental strand, 4229 - 4148
Alignment:
Q  276 tgatatgccatgttatttggtttcataattgtcatgat-ataggaactttcattgatagttaaaggagcaaccaaattattc 356  Q
    ||||||| |||||||||| |||| |||||||||||| | |||  |||| ||||||||| ||||||||||||| |||| ||||    
T  4229 tgatatgtcatgttattttgtttgataattgtcatgttaataaaaactatcattgatatttaaaggagcaactaaatcattc 4148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 14963 - 14903
Alignment:
Q  110 tttctccgatttgattgggttttga-tatggatttgggttttccccgatttcaaaatacgg 169  Q
    |||||||| ||||||||||||| |  ||||  |||||||||||||||||||||||| ||||    
T  14963 tttctccgctttgattgggtttagggtatgagtttgggttttccccgatttcaaaacacgg 14903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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