View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5312_low_18 (Length: 391)

Name: NF5312_low_18
Description: NF5312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5312_low_18
NF5312_low_18
[»] chr6 (6 HSPs)
chr6 (117-372)||(18238125-18238381)
chr6 (228-287)||(1748011-1748070)
chr6 (228-287)||(34571-34630)
chr6 (235-282)||(1747712-1747759)
chr6 (228-287)||(35199689-35199747)
chr6 (232-284)||(26291938-26291990)
[»] chr2 (26 HSPs)
chr2 (228-290)||(8197604-8197666)
chr2 (228-290)||(8202364-8202426)
chr2 (228-290)||(26670925-26670987)
chr2 (228-287)||(1626352-1626411)
chr2 (228-284)||(26784409-26784465)
chr2 (228-287)||(19024335-19024394)
chr2 (228-287)||(19336959-19337018)
chr2 (228-287)||(31254445-31254504)
chr2 (228-287)||(37481683-37481742)
chr2 (228-290)||(2906056-2906118)
chr2 (228-286)||(7431956-7432014)
chr2 (228-277)||(12026081-12026130)
chr2 (231-287)||(37452292-37452348)
chr2 (228-287)||(2377210-2377269)
chr2 (228-287)||(9496023-9496082)
chr2 (228-287)||(9556435-9556494)
chr2 (228-287)||(12141701-12141760)
chr2 (228-287)||(18188909-18188968)
chr2 (228-287)||(42149726-42149785)
chr2 (228-287)||(43832255-43832314)
chr2 (225-259)||(45077881-45077915)
chr2 (230-287)||(17581618-17581675)
chr2 (232-285)||(41779178-41779231)
chr2 (225-285)||(11412862-11412921)
chr2 (239-287)||(32402668-32402716)
chr2 (228-287)||(33504380-33504440)
[»] chr8 (24 HSPs)
chr8 (225-287)||(10079973-10080035)
chr8 (228-290)||(23023382-23023444)
chr8 (228-287)||(16917340-16917399)
chr8 (228-290)||(27037792-27037854)
chr8 (228-290)||(38391956-38392018)
chr8 (228-287)||(23492191-23492250)
chr8 (228-268)||(4011240-4011280)
chr8 (228-287)||(5908803-5908862)
chr8 (228-287)||(17491720-17491779)
chr8 (232-287)||(35643672-35643727)
chr8 (228-287)||(36069759-36069818)
chr8 (225-264)||(41971879-41971918)
chr8 (228-274)||(79184-79230)
chr8 (228-290)||(24399852-24399914)
chr8 (228-290)||(28169549-28169611)
chr8 (229-290)||(12963005-12963066)
chr8 (233-286)||(12966381-12966434)
chr8 (225-290)||(33076279-33076343)
chr8 (229-290)||(39760497-39760558)
chr8 (225-265)||(6483449-6483489)
chr8 (228-276)||(13589636-13589684)
chr8 (238-286)||(21425213-21425261)
chr8 (230-274)||(38483048-38483092)
chr8 (228-272)||(39388940-39388984)
[»] chr1 (20 HSPs)
chr1 (225-287)||(4590598-4590660)
chr1 (228-283)||(3818926-3818981)
chr1 (228-287)||(15577575-15577634)
chr1 (228-287)||(40416528-40416587)
chr1 (232-287)||(42501269-42501324)
chr1 (227-286)||(50636237-50636296)
chr1 (240-290)||(40920592-40920642)
chr1 (225-282)||(10584968-10585025)
chr1 (225-287)||(13827646-13827710)
chr1 (225-287)||(109059-109122)
chr1 (228-287)||(10569137-10569196)
chr1 (228-287)||(29577209-29577267)
chr1 (229-264)||(43375687-43375722)
chr1 (228-287)||(52532682-52532741)
chr1 (252-290)||(27887933-27887971)
chr1 (230-287)||(6025764-6025821)
chr1 (225-286)||(17233838-17233899)
chr1 (228-273)||(30834057-30834102)
chr1 (228-264)||(8676954-8676990)
chr1 (225-273)||(17640147-17640195)
[»] chr7 (23 HSPs)
chr7 (228-287)||(45601633-45601692)
chr7 (229-287)||(1569174-1569232)
chr7 (225-287)||(28542010-28542072)
chr7 (225-287)||(36101843-36101905)
chr7 (228-290)||(40139011-40139073)
chr7 (222-287)||(35922404-35922469)
chr7 (228-284)||(12966173-12966229)
chr7 (228-288)||(24549753-24549813)
chr7 (228-280)||(29653619-29653671)
chr7 (228-287)||(28858202-28858261)
chr7 (225-287)||(27893629-27893691)
chr7 (226-287)||(41578189-41578250)
chr7 (234-286)||(30200031-30200083)
chr7 (228-287)||(28627999-28628058)
chr7 (228-287)||(37976392-37976451)
chr7 (228-287)||(41483644-41483703)
chr7 (228-266)||(30144932-30144970)
chr7 (228-290)||(38135276-38135338)
chr7 (228-265)||(30664725-30664762)
chr7 (228-280)||(9191932-9191984)
chr7 (243-287)||(40008497-40008541)
chr7 (231-283)||(42177088-42177140)
chr7 (228-287)||(44401193-44401250)
[»] chr5 (14 HSPs)
chr5 (228-286)||(12576927-12576985)
chr5 (228-290)||(27998598-27998660)
chr5 (228-277)||(28186851-28186900)
chr5 (228-289)||(32759733-32759794)
chr5 (225-273)||(39322146-39322194)
chr5 (225-287)||(28005689-28005751)
chr5 (228-287)||(9235204-9235263)
chr5 (236-291)||(18698959-18699014)
chr5 (228-287)||(23980101-23980160)
chr5 (228-287)||(35615440-35615499)
chr5 (228-287)||(43475396-43475455)
chr5 (249-287)||(41808100-41808138)
chr5 (228-290)||(5303601-5303665)
chr5 (230-278)||(4460366-4460414)
[»] chr3 (22 HSPs)
chr3 (227-285)||(36304122-36304180)
chr3 (228-277)||(41452816-41452865)
chr3 (227-287)||(50237700-50237760)
chr3 (228-287)||(43308719-43308778)
chr3 (228-287)||(45289157-45289216)
chr3 (228-287)||(49841773-49841832)
chr3 (225-287)||(29601046-29601108)
chr3 (225-290)||(44571581-44571646)
chr3 (234-287)||(55244441-55244494)
chr3 (228-287)||(29475843-29475902)
chr3 (228-287)||(37228085-37228144)
chr3 (228-287)||(37228239-37228298)
chr3 (228-283)||(46431749-46431804)
chr3 (228-287)||(47804729-47804788)
chr3 (225-287)||(19758041-19758103)
chr3 (228-286)||(32385956-32386014)
chr3 (228-265)||(19162675-19162712)
chr3 (228-265)||(39600769-39600806)
chr3 (243-287)||(659697-659741)
chr3 (225-265)||(19737138-19737178)
chr3 (226-290)||(30723875-30723939)
chr3 (228-264)||(32052607-32052643)
[»] chr4 (33 HSPs)
chr4 (228-287)||(47147530-47147587)
chr4 (228-287)||(42639086-42639145)
chr4 (233-284)||(44047440-44047491)
chr4 (229-287)||(25574982-25575040)
chr4 (225-287)||(32339713-32339775)
chr4 (225-287)||(40018255-40018317)
chr4 (228-290)||(40654190-40654252)
chr4 (230-287)||(6843774-6843831)
chr4 (225-286)||(31403101-31403162)
chr4 (225-265)||(31459148-31459188)
chr4 (231-287)||(41192221-41192277)
chr4 (231-287)||(55388277-55388333)
chr4 (228-287)||(934497-934556)
chr4 (228-286)||(21879220-21879279)
chr4 (222-265)||(26025007-26025050)
chr4 (228-287)||(30621267-30621326)
chr4 (228-287)||(31043229-31043288)
chr4 (228-287)||(37042730-37042789)
chr4 (228-287)||(53540447-53540506)
chr4 (228-282)||(18966762-18966816)
chr4 (228-286)||(21214653-21214711)
chr4 (229-263)||(27049267-27049301)
chr4 (228-282)||(38903789-38903843)
chr4 (228-286)||(42293332-42293390)
chr4 (229-287)||(44384988-44385046)
chr4 (225-287)||(53518389-53518451)
chr4 (232-286)||(55007907-55007961)
chr4 (228-277)||(7544599-7544648)
chr4 (228-285)||(7681978-7682035)
chr4 (228-277)||(17666119-17666168)
chr4 (228-265)||(26024938-26024975)
chr4 (249-286)||(29209242-29209279)
chr4 (228-287)||(33225901-33225958)
[»] scaffold0373 (1 HSPs)
scaffold0373 (230-287)||(2367-2424)
[»] scaffold0180 (1 HSPs)
scaffold0180 (225-284)||(25512-25572)
[»] scaffold0018 (1 HSPs)
scaffold0018 (228-264)||(178509-178545)


Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-128; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 117 - 372
Target Start/End: Complemental strand, 18238381 - 18238125
Alignment:
Q  117 atatgtagagaacactcgtagatggtagattttgtattaaaaagagtaacttagatgaaggatattcaatttactagagaaaagagaaagacataggtaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18238381 atatgtagagaacactcgtagatggtagattttgtattaaaaagagtaactcagatgaaggatattcaatttactagaggaaagagaaagacataggtaa 18238282  T
Q  217 atttatttgaaaaactattaa-gaaagatttacagattaatgagttggataaaaatatgatatatgatagaatatgtcggctgatgagaacggtgaatgt 315  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18238281 atttatttaaaaaactattaaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatacgtcggctgatgagaacggtgaatgt 18238182  T
Q  316 gctgcggctagtgtgcatccacaacctattgctgacccaatatggaggtaagaatga 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18238181 gctgcggctagtgtgcatccacaacctattgctgacccaatatggaggtaagaatga 18238125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 1748070 - 1748011
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||| ||||||| ||||| |||||||||||||||||| ||||||  ||||||||||||    
T  1748070 aaactactaagaaaaatttagagattaatgagttggatagaaatatagtatatgatagaa 1748011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 34630 - 34571
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||| |||||||||||| || |||||||||||||||||  ||||||| | ||||||||||    
T  34630 aaaccattaagaaagatctaaagattaatgagttggattgaaatatggtttatgatagaa 34571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 1747759 - 1747712
Alignment:
Q  235 taagaaagatttacagattaatgagttggataaaaatatgatatatga 282  Q
    |||||| ||| || |||||||||||||||||||| |||||||||||||    
T  1747759 taagaaggatctagagattaatgagttggataaagatatgatatatga 1747712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 35199747 - 35199689
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||| ||||||| || ||||||||||||| |||| ||||||| ||||||||||||    
T  35199747 aaactattaggaaagatctagagattaatgagttagatagaaatatg-tatatgatagaa 35199689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 284
Target Start/End: Original strand, 26291938 - 26291990
Alignment:
Q  232 tattaagaaagatttacagattaatgagttggataaaaatatgatatatgata 284  Q
    ||||| |||||||||| ||||| |||||||| ||||||||||| | |||||||    
T  26291938 tattatgaaagatttagagattcatgagttgaataaaaatatggtttatgata 26291990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 8197666 - 8197604
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||    
T  8197666 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatat 8197604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 8202426 - 8202364
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||    
T  8202426 aaactattaagaaagatctaaagattaatgagttggatagaaatatgatatatgatagaatat 8202364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 26670925 - 26670987
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||| |||||||||||||    
T  26670925 aaactattaagaaagatttagagattaatgagttggaccaaaatatgatttatgatagaatat 26670987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 1626352 - 1626411
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||    
T  1626352 aaactattaagaaagatctagagattaatgagttgtataaaaatatgatatataatagaa 1626411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 26784465 - 26784409
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgata 284  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||| |||||||||    
T  26784465 aaactattaagaaagatatagagattaatgagttgaatagaaatatggtatatgata 26784409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 19024335 - 19024394
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||||||||||||||| |||||  |||| ||||||||    
T  19024335 aaactattaagaaagatctaaagattaatgagttggatataaatacaatatttgatagaa 19024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 19337018 - 19336959
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||| |||||||||||| |||||||||||||||||  ||||||| | ||||||||||    
T  19337018 aaactataaagaaagatttagagattaatgagttggatcgaaatatggtttatgatagaa 19336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 31254445 - 31254504
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||||| ||||| ||||    
T  31254445 aaactattaagaaagatctagagattaatgagttgaatagaaatatgatttatgacagaa 31254504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 37481742 - 37481683
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| ||  ||| ||||||||||||||||||||| ||| ||||||||    
T  37481742 aaactattaagaaagatctagcgataaatgagttggataaaaatatggtatttgatagaa 37481683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 2906118 - 2906056
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||||||||||||| || || |||| ||||||||||||||| | ||| |||||||||||||||    
T  2906118 aaactattaagaaaaatgtagagatcaatgagttggataaagaaatgttatatgatagaatat 2906056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 7432014 - 7431956
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    ||||||||||||| ||| || |||||||||||||| ||||||||||| ||||| |||||    
T  7432014 aaactattaagaaggatctagagattaatgagttgaataaaaatatggtatataataga 7431956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 12026130 - 12026081
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgata 277  Q
    ||||||||||||||||| || ||||||||||||| |||| ||||||||||    
T  12026130 aaactattaagaaagatctagagattaatgagtttgatagaaatatgata 12026081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 287
Target Start/End: Complemental strand, 37452348 - 37452292
Alignment:
Q  231 ctattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||| ||| |||||||||||||||| | ||||||| | ||||||||||    
T  37452348 ctattaagaaagaattagagattaatgagttggacagaaatatggtttatgatagaa 37452292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 2377210 - 2377269
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||| ||||||||| ||| |||||||||||||  || |||| ||||||||||||    
T  2377210 aaactattaaaaaagatttagagaataatgagttggatccaactatggtatatgatagaa 2377269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 9496023 - 9496082
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||| ||||||||||| || ||||||||||||||  ||||||| | ||||||||||    
T  9496023 aaactattcagaaagatttagaggttaatgagttggatccaaatatggtttatgatagaa 9496082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 9556494 - 9556435
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| ||  |||||||||||||||| || ||||| | ||||||||||    
T  9556494 aaactattaagaaagatctagtgattaatgagttggatcaagatatggtttatgatagaa 9556435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 12141701 - 12141760
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||| |||||| ||| |||||||||| ||||||  ||||||| ||||||||||||    
T  12141701 aaactattaggaaagacttagagattaatgacttggatccaaatatggtatatgatagaa 12141760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 18188909 - 18188968
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||| |||||||| || ||||||||||| |||||| |||||||||| || ||||||    
T  18188909 aaactattcagaaagatctagagattaatgagctggatagaaatatgatacataatagaa 18188968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 42149785 - 42149726
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||| |||| |||||| ||||||| | ||||||||||    
T  42149785 aaactattaagaaagatctagagattattgagctggatagaaatatggtttatgatagaa 42149726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 43832255 - 43832314
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||| ||| || |||||||||||||||||||  ||||||| ||| ||||||    
T  43832255 aaactattaagaaggatctagagattaatgagttggataaggatatgatgtattatagaa 43832314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 45077881 - 45077915
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgag 259  Q
    ||||||||||||||||||||||| |||||||||||    
T  45077881 gaaaaactattaagaaagatttagagattaatgag 45077915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 17581618 - 17581675
Alignment:
Q  230 actattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||| |||||||||||| ||| |||||||| ||  ||||||||| ||||||||||    
T  17581618 actattacgaaagatttacatatttatgagttgaatctaaatatgatttatgatagaa 17581675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 41779231 - 41779178
Alignment:
Q  232 tattaagaaagatttacagattaatgagttggataaaaatatgatatatgatag 285  Q
    |||||| |||||| || |||||||||||||| ||| | ||||||||||||||||    
T  41779231 tattaaaaaagatctagagattaatgagttgaatagagatatgatatatgatag 41779178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 11412862 - 11412921
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatag 285  Q
    |||||||||||| |||||||| | |||||||||||||||||  ||||||| | ||||||||    
T  11412862 gaaaaactattaggaaagatt-agagattaatgagttggatccaaatatggtttatgatag 11412921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 32402668 - 32402716
Alignment:
Q  239 aaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||| || |||||||||||||||||| ||||| | ||||||||||||    
T  32402668 aaagatctagagattaatgagttggatagaaataaggtatatgatagaa 32402716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 33504380 - 33504440
Alignment:
Q  228 aaactattaagaaagatttacagatt-aatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || ||||| ||| ||||||||  ||||||| ||||||||||||    
T  33504380 aaactattaagaaagatctagagatttaataagttggattgaaatatggtatatgatagaa 33504440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 10080035 - 10079973
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||| ||||||||||| || |||||||||||||||||| ||||||||||| ||||||||    
T  10080035 gaaaaactgttaagaaagatctagagattaatgagttggatagaaatatgatatttgatagaa 10079973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 23023382 - 23023444
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||||| |||||||||| |||||||||||||||||||||  || |||||||||||||||||||    
T  23023382 aaactactaagaaagatctacagattaatgagttggataggaacatgatatatgatagaatat 23023444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 16917340 - 16917399
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||| ||| |||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  16917340 aaactatcaaggaagatttagagattaatgagttggatagaaatatggtatatgatagaa 16917399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 27037792 - 27037854
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||||||| ||||||| || |||||||||||||||||| ||||||| ||| |||||||||||    
T  27037792 aaactattaggaaagatataaagattaatgagttggatagaaatatggtatttgatagaatat 27037854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 38392018 - 38391956
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||| |||||||||||| ||||||||||||||| ||||  ||||||| |||||||||||||||    
T  38392018 aaaccattaagaaagatctacagattaatgagtgggatcgaaatatggtatatgatagaatat 38391956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 23492191 - 23492250
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||| | |||||||| ||  ||||||||||||||||| ||||||||||||||||||||    
T  23492191 aaactactcagaaagatgtagcgattaatgagttggatagaaatatgatatatgatagaa 23492250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 4011240 - 4011280
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaa 268  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  4011240 aaactattaagaaagatctaaagattaatgagttggataaa 4011280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 5908803 - 5908862
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||| ||||||  |  |||||||||||||||| |||||||||| ||||||||||    
T  5908803 aaactattaaaaaagatccaaggattaatgagttggatcaaaatatgatttatgatagaa 5908862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 17491779 - 17491720
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||| ||  ||||||||||||||||  |||||||| | ||||||||||    
T  17491779 aaactattaagaaagacttggagattaatgagttggaccaaaatatggtttatgatagaa 17491720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 232 - 287
Target Start/End: Complemental strand, 35643727 - 35643672
Alignment:
Q  232 tattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||| || |||||||||||||||||  ||||||| | ||||||||||    
T  35643727 tattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaa 35643672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 36069759 - 36069818
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||| ||| ||||| ||||||||||||||| || ||||||| | ||||||||||    
T  36069759 aaactattaacaaatatttagagattaatgagttgggtagaaatatggtttatgatagaa 36069818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 264
Target Start/End: Complemental strand, 41971918 - 41971879
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttgga 264  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  41971918 gaaaaactactaagaaagatttagagattaatgagttgga 41971879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 274
Target Start/End: Original strand, 79184 - 79230
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatg 274  Q
    ||||||||||||||||| || ||||||||||| |||||| |||||||    
T  79184 aaactattaagaaagatctagagattaatgagctggatagaaatatg 79230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 24399914 - 24399852
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||||||||||| ||| |  |||||||||||||||||  ||||||| | |||||||||||||    
T  24399914 aaactattaagaaggatctcgagattaatgagttggattgaaatatggtttatgatagaatat 24399852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 28169549 - 28169611
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||||||| |||||||||  |||||||||||||||||  ||||||| | ||||||| |||||    
T  28169549 aaactattaggaaagattttgagattaatgagttggattcaaatatggtttatgataaaatat 28169611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 12963005 - 12963066
Alignment:
Q  229 aactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||||||| |||||  || ||| ||||||||| |||||| ||||||||||| |||||||||    
T  12963005 aactattaaaaaagacctaaagaataatgagttagataaatatatgatatataatagaatat 12963066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 286
Target Start/End: Complemental strand, 12966434 - 12966381
Alignment:
Q  233 attaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    ||||||||||||||| |||||||||||||| ||  ||||||| | |||||||||    
T  12966434 attaagaaagatttagagattaatgagttgaattcaaatatggtttatgataga 12966381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 33076279 - 33076343
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||||||||||| ||||||||| |||||||||||||| |  |||||||| | ||| |||||||||    
T  33076279 gaaaaactattaa-aaagatttagagattaatgagttgtaccaaaatatggtttataatagaatat 33076343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 39760558 - 39760497
Alignment:
Q  229 aactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||||||||||||  | || |||||||| ||||||||| | |||||||||||||| ||||||    
T  39760558 aactattaagaaaactctagagattaataagttggatagagatatgatatatgattgaatat 39760497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 6483449 - 6483489
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggat 265  Q
    ||||||||||||||||||||||| || ||||||| ||||||    
T  6483449 gaaaaactattaagaaagatttaaaggttaatgaattggat 6483489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 276
Target Start/End: Original strand, 13589636 - 13589684
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgat 276  Q
    |||||||||  ||||||||| |||||||||||||| || ||||||||||    
T  13589636 aaactattagaaaagatttaaagattaatgagttgaatcaaaatatgat 13589684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 286
Target Start/End: Original strand, 21425213 - 21425261
Alignment:
Q  238 gaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    ||||||| || |||||||||||||||||  ||||||||| |||||||||    
T  21425213 gaaagatatagagattaatgagttggatcgaaatatgatttatgataga 21425261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 274
Target Start/End: Complemental strand, 38483092 - 38483048
Alignment:
Q  230 actattaagaaagatttacagattaatgagttggataaaaatatg 274  Q
    |||||| |||||||| || |||||||||||||||||| |||||||    
T  38483092 actattcagaaagatctagagattaatgagttggatagaaatatg 38483048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 39388940 - 39388984
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaata 272  Q
    ||||||||| ||||||| || |||||||||||||||||| |||||    
T  39388940 aaactattaggaaagatctagagattaatgagttggatagaaata 39388984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 4590660 - 4590598
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||||||||| ||||| |||||||||||| | ||||||||| ||||||||    
T  4590660 gaaaaactattaagaaagatttatagattgatgagttggatagatatatgatatgtgatagaa 4590598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 3818981 - 3818926
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgat 283  Q
    |||||||||||||||||||| |||||||||||||| ||| ||||||| | ||||||    
T  3818981 aaactattaagaaagatttagagattaatgagttgaatagaaatatggtttatgat 3818926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 15577575 - 15577634
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||| ||| || |||||||||||||||||| | ||||||||| ||||||||    
T  15577575 aaactattaagaaggatatagagattaatgagttggatagagatatgatatttgatagaa 15577634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 40416528 - 40416587
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||||||||||||||  ||||||| | ||||||||||    
T  40416528 aaactattaagaaagatctatagattaatgagttggatcgaaatatggtttatgatagaa 40416587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 287
Target Start/End: Original strand, 42501269 - 42501324
Alignment:
Q  232 tattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||| || |||||||||||||||||| |||||||  |||||||||||    
T  42501269 tattaagaaagatctatagattaatgagttggatagaaatatggaatatgatagaa 42501324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 286
Target Start/End: Original strand, 50636237 - 50636296
Alignment:
Q  227 aaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    ||||||||||||| | || || |||||| ||||||||||||||||||| |||||||||||    
T  50636237 aaaactattaagataaatctagagattattgagttggataaaaatatggtatatgataga 50636296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 40920642 - 40920592
Alignment:
Q  240 aagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||| || |||||||||||||||||| ||||||| |||||||||||||||    
T  40920642 aagatctagagattaatgagttggatagaaatatggtatatgatagaatat 40920592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 282
Target Start/End: Complemental strand, 10585025 - 10584968
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatga 282  Q
    ||||||||||||||||||||  | |||||||||||||||| | | |||||||||||||    
T  10585025 gaaaaactattaagaaagatccagagattaatgagttggacagagatatgatatatga 10584968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 13827710 - 13827646
Alignment:
Q  225 gaaaaactattaagaaaga--tttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| |  | || |||||||||||||||||| ||||||| ||||||||||||    
T  13827710 gaaaaactattaagaaaaaagtctagagattaatgagttggatagaaatatggtatatgatagaa 13827646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 109122 - 109059
Alignment:
Q  225 gaaaaactatta-agaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||| | |||||||| || | |||||||||||||||||| ||||||| ||||||||||    
T  109122 gaaaaactataagagaaagatatagacattaatgagttggataaatatatgatgtatgatagaa 109059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 10569196 - 10569137
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||||| || |||||| ||||||  ||||||||||||    
T  10569196 aaactattaagaaagatctagagattaataagctggatagaaatatcgtatatgatagaa 10569137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 29577267 - 29577209
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || ||||||||||| ||||| |||||||| | ||||||||||    
T  29577267 aaactattaagaaagatctagagattaatgagctggatcaaaatatggt-tatgatagaa 29577209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 229 - 264
Target Start/End: Complemental strand, 43375722 - 43375687
Alignment:
Q  229 aactattaagaaagatttacagattaatgagttgga 264  Q
    ||||||||||||||||||| ||||||||||||||||    
T  43375722 aactattaagaaagatttagagattaatgagttgga 43375687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 52532741 - 52532682
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||| |||||||||| | ||||||||||||||  |||||||| | ||||||||||    
T  52532741 aaactattaggaaagatttagaaattaatgagttggaacaaaatatggtttatgatagaa 52532682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 27887971 - 27887933
Alignment:
Q  252 ttaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  27887971 ttaatgagttggaccaaaatatgatatatgatagaatat 27887933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 6025764 - 6025821
Alignment:
Q  230 actattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||| ||| |||||| || |||||||||||||||||| ||||||| ||| ||||||||    
T  6025764 actagtaaaaaagatctagagattaatgagttggatagaaatatggtatctgatagaa 6025821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 17233899 - 17233838
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    ||||||||||||||||||||  |  ||||| |||||||||||  |||||| |||||||||||    
T  17233899 gaaaaactattaagaaagatccagcgattattgagttggataggaatatggtatatgataga 17233838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 30834102 - 30834057
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatat 273  Q
    ||||||||| ||||||| || |||||||||||||||||| ||||||    
T  30834102 aaactattacgaaagatctagagattaatgagttggatagaaatat 30834057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 8676990 - 8676954
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttgga 264  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  8676990 aaactattaaaaaagatttagagattaatgagttgga 8676954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 17640195 - 17640147
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatat 273  Q
    |||||||||| | ||| ||| || |||||||||||||||||||||||||    
T  17640195 gaaaaactataaggaaggatctagagattaatgagttggataaaaatat 17640147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 45601633 - 45601692
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||| |||||||||||| || ||||||||||||||||| |||||||||| ||||||||||    
T  45601633 aaaccattaagaaagatctagagattaatgagttggatcaaaatatgatttatgatagaa 45601692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 1569174 - 1569232
Alignment:
Q  229 aactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||| || ||||||||||||||||| |||||||| | ||||||||||    
T  1569174 aactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgatagaa 1569232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 28542072 - 28542010
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||||||||| |||||||||||||||||  || |||| | ||||||||||    
T  28542072 gaaaaactattaagaaagatttagagattaatgagttggattgaactatggtttatgatagaa 28542010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 36101905 - 36101843
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||| ||||| |||||||||| ||||||||||||||||| |||||||| | ||||||||||    
T  36101905 gaaaaattattatgaaagatttatagattaatgagttggatcaaaatatggtttatgatagaa 36101843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 40139073 - 40139011
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||||||||||||||| || ||||||||| ||| |||| |||||||| ||||||||||||||    
T  40139073 aaactattaagaaagatctagagattaatgcgtttgatagaaatatgacatatgatagaatat 40139011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 35922404 - 35922469
Alignment:
Q  222 tttgaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||| |||||||||||||||||||| || ||||||||||| ||  ||||||||| ||||||||||    
T  35922404 tttgagaaactattaagaaagatttagaggttaatgagttgaatctaaatatgatttatgatagaa 35922469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 284
Target Start/End: Original strand, 12966173 - 12966229
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgata 284  Q
    |||||||||||||| ||||| |||||||||| ||||||| ||||||| |||||||||    
T  12966173 aaactattaagaaatatttagagattaatgatttggatagaaatatggtatatgata 12966229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 24549813 - 24549753
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaat 288  Q
    ||||||||||||||||| || |||||||||||||||||  ||||||| ||| |||||||||    
T  24549813 aaactattaagaaagatctagagattaatgagttggattgaaatatggtatttgatagaat 24549753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 29653671 - 29653619
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatat 280  Q
    ||||||||||||||||| || ||||||||||||| |||| |||||||||||||    
T  29653671 aaactattaagaaagatctagagattaatgagttagatagaaatatgatatat 29653619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 28858202 - 28858261
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||||| ||||||||| ||||||  ||||||||||||    
T  28858202 aaactattaagaaagatctagagattaataagttggatagaaatattttatatgatagaa 28858261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 27893691 - 27893629
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||||||||| ||||||||||| ||||   ||||||| | ||||||||||    
T  27893691 gaaaaactattaagaaagatttagagattaatgagctggaccgaaatatgttttatgatagaa 27893629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 287
Target Start/End: Complemental strand, 41578250 - 41578189
Alignment:
Q  226 aaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||| |||||||| || || |||||| ||||||||||| | ||||||||||||||||||    
T  41578250 aaaaactgttaagaaacatatagagattagtgagttggatagagatatgatatatgatagaa 41578189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 30200083 - 30200031
Alignment:
Q  234 ttaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    ||||||||||| || ||||||||||||| |||| ||||||| |||||||||||    
T  30200083 ttaagaaagatctagagattaatgagtttgatataaatatggtatatgataga 30200031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 28628058 - 28627999
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||| |||||||||| |||||||||||||||||  |||| || | ||||||||||    
T  28628058 aaactattaggaaagatttagagattaatgagttggatgcaaatgtggtttatgatagaa 28627999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 37976392 - 37976451
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||| || |||||||||| |||||||||||||||||  ||||||| | ||||||||||    
T  37976392 aaactaatatgaaagatttagagattaatgagttggatccaaatatggtttatgatagaa 37976451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 41483644 - 41483703
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || | ||||| |||||||||| | |||||||||||| |||||    
T  41483644 aaactattaagaaagatctagaaattaacgagttggatatagatatgatatatggtagaa 41483703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 30144932 - 30144970
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggata 266  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  30144932 aaactattaagaaagatctagagattaatgagttggata 30144970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 38135338 - 38135276
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||||||||| ||||||||| ||||||||||||||||   |||||||   |||||||||||||    
T  38135338 aaactattaaaaaagatttagagattaatgagttggaccgaaatatgggttatgatagaatat 38135276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 30664725 - 30664762
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggat 265  Q
    ||||||||||||||||| || |||||||||||||||||    
T  30664725 aaactattaagaaagatctagagattaatgagttggat 30664762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 9191932 - 9191984
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatat 280  Q
    ||||||||||||||||| || |||||||| | || |||| |||||||||||||    
T  9191932 aaactattaagaaagatctagagattaataaatttgatagaaatatgatatat 9191984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Complemental strand, 40008541 - 40008497
Alignment:
Q  243 atttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||| |||||||||||||||||| | | ||||||||||||||||    
T  40008541 atttatagattaatgagttggatagagacatgatatatgatagaa 40008497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 42177140 - 42177088
Alignment:
Q  231 ctattaagaaagatttacagattaatgagttggataaaaatatgatatatgat 283  Q
    |||||||||||||| || |||| ||||||||  ||||||||||| ||||||||    
T  42177140 ctattaagaaagatctagagataaatgagtttcataaaaatatggtatatgat 42177088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 44401250 - 44401193
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||||||| ||||||| |||||  || |||||||| | ||||||||||    
T  44401250 aaactattaagaaagatttagagattaacgagtt--atcaaaatatgttttatgatagaa 44401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 12576985 - 12576927
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||| |||||||||||    
T  12576985 aaactattaagaaagatctagagattaatgagttgaatagaaatatggtatatgataga 12576927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 27998598 - 27998660
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||||| |||||||||| |||||||||||||||| ||||  || |||||||||||||||||||    
T  27998598 aaactactaagaaagatctacagattaatgagttagataggaacatgatatatgatagaatat 27998660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 28186900 - 28186851
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgata 277  Q
    |||||||||||||||||||| |||||||||||||||||| | ||||||||    
T  28186900 aaactattaagaaagatttagagattaatgagttggatagagatatgata 28186851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 289
Target Start/End: Original strand, 32759733 - 32759794
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaata 289  Q
    |||||||||||||||||||| ||| ||||||||||| | |||||||||| |||||| |||||    
T  32759733 aaactattaagaaagatttatagaataatgagttggttcaaaatatgatttatgatggaata 32759794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 225 - 273
Target Start/End: Complemental strand, 39322194 - 39322146
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatat 273  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||    
T  39322194 gaaaaactattaagaaagatctaaagattaatgagttggatagaaatat 39322146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 28005689 - 28005751
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||||||| || ||||||||||||| ||||   |||||||||| |||||||    
T  28005689 gaaaaactattaagaaagatctagagattaatgagtttgatagggatatgatatacgatagaa 28005751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 9235204 - 9235263
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || ||||||||||| |||||  ||||||| | ||||||||||    
T  9235204 aaactattaagaaagatatagagattaatgagctggatcgaaatatggtttatgatagaa 9235263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 236 - 291
Target Start/End: Original strand, 18698959 - 18699014
Alignment:
Q  236 aagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatatg 291  Q
    ||||||||| || |||||| ||||||||||| ||||||| |||||||| |||||||    
T  18698959 aagaaagatctagagattagtgagttggatagaaatatgttatatgattgaatatg 18699014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 23980101 - 23980160
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||| |||| |||||| |||||||||||||||||  ||||||| | ||||||||||    
T  23980101 aaactattgagaatgatttatagattaatgagttggatctaaatatggtttatgatagaa 23980160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 35615440 - 35615499
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||| | ||| ||||| |||||||||||||||||||||||||  | ||||||||||    
T  35615440 aaactattcataaaaatttagagattaatgagttggataaaaatatagtttatgatagaa 35615499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 43475396 - 43475455
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||||  | |||||||||||||||||  ||||||||| |||| |||||    
T  43475396 aaactattaagaaagatccagagattaatgagttggatcgaaatatgatttatggtagaa 43475455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 41808100 - 41808138
Alignment:
Q  249 agattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  41808100 agattaatgagttggatataaatatgatgtatgatagaa 41808138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 290
Target Start/End: Original strand, 5303601 - 5303665
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggat--aaaaatatgatatatgatagaatat 290  Q
    |||||||| | ||||||||| || ||||||||||||||  ||| ||||| |||||||||||||||    
T  5303601 aaactattgaaaaagatttagagtttaatgagttggatagaaatatatggtatatgatagaatat 5303665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 4460366 - 4460414
Alignment:
Q  230 actattaagaaagatttacagattaatgagttggataaaaatatgatat 278  Q
    ||||||||||||||  || |||||||||||||||||| ||||| |||||    
T  4460366 actattaagaaagacctagagattaatgagttggatagaaatacgatat 4460414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 36304122 - 36304180
Alignment:
Q  227 aaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatag 285  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||| | ||||||||    
T  36304122 aaaactattaagaaagatctagagattaatgagttggatcaaaatatggtttatgatag 36304180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 41452865 - 41452816
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgata 277  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||    
T  41452865 aaactattaagaaagatctagagattaatgagttggataaatatatgata 41452816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 227 - 287
Target Start/End: Complemental strand, 50237760 - 50237700
Alignment:
Q  227 aaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||||| | |||||| ||||||||||| ||||||  ||||||||||||    
T  50237760 aaaactattaagaaagattcagagattattgagttggatagaaatattgtatatgatagaa 50237700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 43308719 - 43308778
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||| || || |||||||| ||||||||| | ||||||||||||||||||    
T  43308719 aaactattaagaaaaatctagagattaatcagttggatagagatatgatatatgatagaa 43308778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 45289216 - 45289157
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||| |||||||||| |||||||||||||||||  ||||||| | ||||||||||    
T  45289216 aaactattaggaaagatttagagattaatgagttggatccaaatatggtttatgatagaa 45289157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 49841773 - 49841832
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||| |||||| || |||||||||||||||||  ||||||| ||||||||||||    
T  49841773 aaactattaacaaagatctaaagattaatgagttggatcgaaatatggtatatgatagaa 49841832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 29601046 - 29601108
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||| ||||||||||||||||| |||||||||||||||||  ||||||  | ||||||||||    
T  29601046 gaaaagctattaagaaagatttagagattaatgagttggattcaaatatagtttatgatagaa 29601108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 290
Target Start/End: Original strand, 44571581 - 44571646
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||||||||| | |||| ||||| |||||||||||||||||  ||||||| | |||||||||||||    
T  44571581 gaaaaactataaggaaatatttagagattaatgagttggatccaaatatggtttatgatagaatat 44571646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 55244441 - 55244494
Alignment:
Q  234 ttaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||| || || |||||||||||||||||| ||||||| ||||||||||||    
T  55244441 ttaagaaaaatctagagattaatgagttggatagaaatatggtatatgatagaa 55244494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 29475843 - 29475902
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||||||||||||||  ||||||  | ||||||||||    
T  29475843 aaactattaagaaagatctagagattaatgagttggattgaaatattgtttatgatagaa 29475902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 37228085 - 37228144
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||| ||| | ||||||||||| |||||| |||||||| ||| |||||    
T  37228085 aaactattaagaaagacttagaaattaatgagttagataaagatatgataaatggtagaa 37228144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 37228239 - 37228298
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||| ||| | ||||| |||||||||||| |||||||| ||| |||||    
T  37228239 aaactattaagaaagacttagaaattaacgagttggataaagatatgataaatggtagaa 37228298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 283
Target Start/End: Complemental strand, 46431804 - 46431749
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgat 283  Q
    |||||||||| |||||| || |||||||||||||||||| | |||| |||||||||    
T  46431804 aaactattaaaaaagatctagagattaatgagttggatagagatattatatatgat 46431749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 47804788 - 47804729
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||| ||||||||||||||| |||||||||||||| ||| | | ||| ||||||||||||    
T  47804788 aaacgattaagaaagatttagagattaatgagttgaatagagacatgctatatgatagaa 47804729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 19758041 - 19758103
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||| |||| ||||| |||||||||||||||||   |||||| | ||||||||||    
T  19758041 gaaaaactattaggaaatatttagagattaatgagttggatctcaatatggtttatgatagaa 19758103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 32386014 - 32385956
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    |||||||||||||| ||||| || ||||| | || ||||||||||||||||| ||||||    
T  32386014 aaactattaagaaatatttataggttaataaattagataaaaatatgatataagataga 32385956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 19162712 - 19162675
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggat 265  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  19162712 aaactattaggaaagatttagagattaatgagttggat 19162675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 39600806 - 39600769
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggat 265  Q
    |||||||||||||||||||| || ||||||||||||||    
T  39600806 aaactattaagaaagatttagaggttaatgagttggat 39600769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 659697 - 659741
Alignment:
Q  243 atttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||||||||||   |||| |||||||||||||    
T  659697 atttacagattaatgagttggatagggatattatatatgatagaa 659741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 19737138 - 19737178
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggat 265  Q
    |||||||||||| |||| ||||| |||||||||||||||||    
T  19737138 gaaaaactattaggaaatatttagagattaatgagttggat 19737178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 30723939 - 30723875
Alignment:
Q  226 aaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    |||||||||||| || |||||| ||| ||| ||||| |||| | |||| ||||||||||||||||    
T  30723939 aaaaactattaaaaatgatttaaagaataacgagtttgatagatatataatatatgatagaatat 30723875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 32052643 - 32052607
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttgga 264  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  32052643 aaactattaggaaagatttatagattaatgagttgga 32052607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 47147530 - 47147587
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||||||||||||||  | ||||||||||||||||||    
T  47147530 aaactattaagaaagatctagagattaatgagttggat--agatatgatatatgatagaa 47147587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 42639145 - 42639086
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| ||  ||||||||||||||||| ||||||| ||| ||||||||    
T  42639145 aaactattaagaaagatctagcgattaatgagttggatagaaatatggtatttgatagaa 42639086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 44047491 - 44047440
Alignment:
Q  233 attaagaaagatttacagattaatgagttggataaaaatatgatatatgata 284  Q
    |||||||||||| || ||||||||||||||||||| |||||| |||||||||    
T  44047491 attaagaaagatctagagattaatgagttggataataatatggtatatgata 44047440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 25574982 - 25575040
Alignment:
Q  229 aactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||| || |||||||||||||||||  ||||||| | ||||||||||    
T  25574982 aactattaagaaagatctagagattaatgagttggatcgaaatatggtttatgatagaa 25575040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 32339713 - 32339775
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| |  || ||||||| |||||||||| | ||||||||||||||||||    
T  32339713 gaaaaactattaagaaatacctagagattaacgagttggatagagatatgatatatgatagaa 32339775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 40018317 - 40018255
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||| ||||||||||| || |||| |||||||||||||   ||||||||||||||||||    
T  40018317 gaaaaactgttaagaaagatctagagatcaatgagttggatagggatatgatatatgatagaa 40018255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 40654252 - 40654190
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaatat 290  Q
    ||||||| ||||||||| || ||||||||||||| |||| ||||||||||| ||||| |||||    
T  40654252 aaactatcaagaaagatgtaaagattaatgagttagatataaatatgatatttgatataatat 40654190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 6843774 - 6843831
Alignment:
Q  230 actattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||| || ||||||||||||| |||| ||||||| ||||| ||||||    
T  6843774 actattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaa 6843831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 286
Target Start/End: Complemental strand, 31403162 - 31403101
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    |||||||||||| ||||||| || |||||||| ||||||||| |||| || |||||||||||    
T  31403162 gaaaaactattatgaaagatctagagattaattagttggatagaaatgtggtatatgataga 31403101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 31459148 - 31459188
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggat 265  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  31459148 gaaaaactattaggaaagatttagagattaatgagttggat 31459188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 41192221 - 41192277
Alignment:
Q  231 ctattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||| ||||||||| || |||||||||||||||||| ||||||| |||||| |||||    
T  41192221 ctataaagaaagatctagagattaatgagttggatagaaatatggtatatggtagaa 41192277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 287
Target Start/End: Complemental strand, 55388333 - 55388277
Alignment:
Q  231 ctattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||  ||||||||||||| |||  ||||||||| ||||||||||    
T  55388333 ctattaagaaagatttggagattaatgagttagatcgaaatatgatttatgatagaa 55388277  T

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Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 934556 - 934497
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||| | || ||||||||||||||||||    |||||||||||||||||    
T  934556 aaactattaagaaagttctagagattaatgagttggatagggttatgatatatgatagaa 934497  T

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Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 21879279 - 21879220
Alignment:
Q  228 aaactatt-aagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    |||||||| ||||||||| || |||| ||||||||||||| | |||||||||||||||||    
T  21879279 aaactattcaagaaagatctagagatgaatgagttggatagagatatgatatatgataga 21879220  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 222 - 265
Target Start/End: Complemental strand, 26025050 - 26025007
Alignment:
Q  222 tttgaaaaactattaagaaagatttacagattaatgagttggat 265  Q
    ||||| ||||||||||||||||| || |||||||||||||||||    
T  26025050 tttgagaaactattaagaaagatctagagattaatgagttggat 26025007  T

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Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 30621326 - 30621267
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||||||| ||||||||| ||||||   ||||||| | ||||||||||    
T  30621326 aaactattaagaaagatttagagattaatgtgttggaccgaaatatggtttatgatagaa 30621267  T

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Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 31043229 - 31043288
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||| |||||||||| |||||||||||||||||  ||||||| | | ||||||||    
T  31043229 aaactattaggaaagatttagagattaatgagttggatccaaatatggtttgtgatagaa 31043288  T

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Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 37042789 - 37042730
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||||| || |||||| ||||||||||| ||||| | ||| ||||||||    
T  37042789 aaactattaagaaagatctagagattattgagttggatagaaatacggtatttgatagaa 37042730  T

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Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 53540447 - 53540506
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||| |||||| ||  |||||||||||||||| ||||||||| | ||||||||||    
T  53540447 aaactattaggaaagacttggagattaatgagttggacaaaaatatggtttatgatagaa 53540506  T

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Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 18966762 - 18966816
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatga 282  Q
    ||||||||||||||||| ||||||||| |||| |||||  | |||||||||||||    
T  18966762 aaactattaagaaagatctacagattagtgagctggattgagatatgatatatga 18966816  T

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Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 21214711 - 21214653
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    ||||||||||||||| | || ||| |||||||||||| | ||||||||| |||||||||    
T  21214711 aaactattaagaaaggtctatagagtaatgagttggagagaaatatgatgtatgataga 21214653  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 263
Target Start/End: Complemental strand, 27049301 - 27049267
Alignment:
Q  229 aactattaagaaagatttacagattaatgagttgg 263  Q
    ||||||||||||||||||| |||||||||||||||    
T  27049301 aactattaagaaagatttatagattaatgagttgg 27049267  T

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Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 38903843 - 38903789
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatga 282  Q
    ||||||||||||||||  || ||||||||||||| |||| | |||||||||||||    
T  38903843 aaactattaagaaagacctaaagattaatgagtttgatagagatatgatatatga 38903789  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Complemental strand, 42293390 - 42293332
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    ||||||||||||||||| || | ||||||||||| |||| | ||||| |||||||||||    
T  42293390 aaactattaagaaagatctagaaattaatgagttagatagacatatggtatatgataga 42293332  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 44384988 - 44385046
Alignment:
Q  229 aactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||| || |||||||| |||||||||  |||||| | ||||||||||    
T  44384988 aactattaagaaagatctagagattaataagttggatattaatatggtttatgatagaa 44385046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 287
Target Start/End: Complemental strand, 53518451 - 53518389
Alignment:
Q  225 gaaaaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||| || |||||||||| || ||||||||||||||  ||||||| | ||||||||||    
T  53518451 gaaaaactaataggaaagatttagaggttaatgagttggatctaaatatggtttatgatagaa 53518389  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 55007907 - 55007961
Alignment:
Q  232 tattaagaaagatttacagattaatgagttggataaaaatatgatatatgataga 286  Q
    |||||||||||||||| ||||||||||||||||   ||||||| | |||||||||    
T  55007907 tattaagaaagatttagagattaatgagttggaccgaaatatggtttatgataga 55007961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 7544648 - 7544599
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgata 277  Q
    ||||||||||||||||| || ||||||||||||| |||  ||||||||||    
T  7544648 aaactattaagaaagatctagagattaatgagtttgatcgaaatatgata 7544599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 285
Target Start/End: Complemental strand, 7682035 - 7681978
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatag 285  Q
    ||||||| |||||| || || ||||||||||||| |||| ||||||| ||||||||||    
T  7682035 aaactatcaagaaaaatctatagattaatgagttagatagaaatatggtatatgatag 7681978  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 277
Target Start/End: Complemental strand, 17666168 - 17666119
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgata 277  Q
    |||||||||  ||||||||| ||||||||||||| ||| |||||||||||    
T  17666168 aaactattagaaaagatttatagattaatgagttagatgaaaatatgata 17666119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 26024975 - 26024938
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggat 265  Q
    ||||||||||||||||| || |||||||||||||||||    
T  26024975 aaactattaagaaagatctagagattaatgagttggat 26024938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 286
Target Start/End: Complemental strand, 29209279 - 29209242
Alignment:
Q  249 agattaatgagttggataaaaatatgatatatgataga 286  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  29209279 agattaatgagttggatagaaatatggtatatgataga 29209242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 33225958 - 33225901
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    |||||||||||||||||||| ||||||| |||||  || |||||||| | ||||||||||    
T  33225958 aaactattaagaaagatttagagattaacgagtt--atcaaaatatgttttatgatagaa 33225901  T

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Target: scaffold0373 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 230 - 287
Target Start/End: Complemental strand, 2424 - 2367
Alignment:
Q  230 actattaagaaagatttacagattaatgagttggataaaaatatgatatatgatagaa 287  Q
    ||||||||||||||| || ||||||||||||| |||| ||||||| ||||| ||||||    
T  2424 actattaagaaagatctagagattaatgagtttgatagaaatatgttatataatagaa 2367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 284
Target Start/End: Complemental strand, 25572 - 25512
Alignment:
Q  225 gaaaaactattaagaaa-gatttacagattaatgagttggataaaaatatgatatatgata 284  Q
    ||||||||||||| ||| |||||| |||||||||||||||||| ||||| | |||||||||    
T  25572 gaaaaactattaaaaaatgatttagagattaatgagttggatagaaataagttatatgata 25512  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 178545 - 178509
Alignment:
Q  228 aaactattaagaaagatttacagattaatgagttgga 264  Q
    ||||||||||||||||| || ||||||||||||||||    
T  178545 aaactattaagaaagatatagagattaatgagttgga 178509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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