View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5312_low_78 (Length: 235)
Name: NF5312_low_78
Description: NF5312
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5312_low_78 |
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Alignment Details
Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 46 - 217
Target Start/End: Original strand, 22881499 - 22881670
Alignment:
| Q |
46 |
gtgtaattttgtttttacaatgaataaaaatcggatgtatcattttgttcttttgcataacataaataaagtaatgaatgcataatatttttatttccat |
145 |
Q |
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| T |
22881499 |
gtgtaattttgtttttacaatgaataaaaatcggatgtatcattttgttctttttcataacataaataaagtaatgaatgcataatatttttatttccat |
22881598 |
T |
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| Q |
146 |
atctgctgtgtagaaaaaatatgtgagcagcacatttatttttaatatataataactaaaaatagtgcttaa |
217 |
Q |
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| T |
22881599 |
atctgttgtgtagaaaaaatatgtgagcagcacatttatttttaacatataataactaaaaatagtgcttaa |
22881670 |
T |
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