View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5315-Insertion-2 (Length: 961)
Name: NF5315-Insertion-2
Description: NF5315
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5315-Insertion-2 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 569; Significance: 0; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 569; E-Value: 0
Query Start/End: Original strand, 8 - 609
Target Start/End: Complemental strand, 2429862 - 2429265
Alignment:
| Q |
8 |
caacaacaaccacttgtttaccaacattttgaccactaaacagaccaaccaaagctgcagggccattctcaagaccctcagctatgtcttccacatacac |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2429862 |
caacaacaaccacttgtttaccaacattttgaccactaaacagaccaaccaaagctgcagggccattctcaagaccctcagctatgtcttccacatacac |
2429763 |
T |
|
| Q |
108 |
aacctttccttctcttataagaggcagcataaactccaagaattttgtataaagatgatagtattcaaatacagcaaaaccttccatccggatccgctta |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2429762 |
aacctttccttctcttataagaggcagcataaactccaagaattttgtataaagatgatagtattcaaatacagcaaaaccttccatccggatccgctta |
2429663 |
T |
|
| Q |
208 |
tatatgatatgtgccaaatttgtgacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatccgcccatggagtttcatattca |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2429662 |
tatatgatatgtgccaaatttgtgacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatccgcccatggagtttcatattca |
2429563 |
T |
|
| Q |
308 |
agagtacagcatcaagtgtctttccccccacattctcaaagtaaatgtcaatgccttctggaaagtatctagtttacataaattgatatctactagttat |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2429562 |
agagtacagcatcaagtgtctttccccccacattctcaaagtaaatgtcaatgccttctggaaagtatctagtttacataaattgatatctactagttat |
2429463 |
T |
|
| Q |
408 |
tagtgtgtctcattttaccaggtaactatctatgaagcactcacacgatacctgacactgataattaaatacacacgaataataatttggaaaaatagaa |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2429462 |
tagtgtgtctcattttaccaggtaactatctatgaagcactcacacgatacctggcactga----taaatacacacgaataataatttggaaaaatagaa |
2429367 |
T |
|
| Q |
508 |
gtgagtctatgcaatcacaagagacgctgttatgttggtgtcagatattaacacgtgtcgaacacgccttgaatatatagttttgatgctaggtaactat |
607 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
2429366 |
gtgagtgtatgcaatcacaagagacgctgttatgttggtgtcagatattaacacgtgtcggacacgccttgaatatatagtgttgatgctaggtaactat |
2429267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 664 - 957
Target Start/End: Complemental strand, 1459503 - 1459206
Alignment:
| Q |
664 |
cagaccttttcaaagctgcattgagttctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctggtgtgtcgt |
763 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1459503 |
cagaccttttcaaagctgcattgaggtctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctggtgtgtcgt |
1459404 |
T |
|
| Q |
764 |
aattatattcatttagtataattataggatagtggttataattaattatgtacaggtttccaaaatttaaaatagtattttgtatcataatcaaacta-- |
861 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1459403 |
aattatattcatttagtataattataggatagtggttataattaattatgtacaggtttccaaaatttaaaatagtattttgtatcataatcaaactaac |
1459304 |
T |
|
| Q |
862 |
-acttaacctcaacaagtgagcaaagacttggatagtggttattgtagttaggctaattc-aaatagcactactttaaaccgtagaatgaataatcaa |
957 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1459303 |
tacttaacctcaacaagtgagcaaagacttggatagtggttattgaagttaggctaattcaaaatagcactactttaaaccgtagaatgaataatcaa |
1459206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 664 - 957
Target Start/End: Complemental strand, 2429210 - 2428913
Alignment:
| Q |
664 |
cagaccttttcaaagctgcattgagttctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctggtgtgtcgt |
763 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2429210 |
cagaccttttcaaagctgcattgaggtctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctggtgtgtcgt |
2429111 |
T |
|
| Q |
764 |
aattatattcatttagtataattataggatagtggttataattaattatgtacaggtttccaaaatttaaaatagtattttgtatcataatcaaacta-- |
861 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2429110 |
aattatattcatttagtataattataggatagtggttataattaattatgtacaggtttccaaaatttaaaatagtattttgtatcataatcaaactaac |
2429011 |
T |
|
| Q |
862 |
-acttaacctcaacaagtgagcaaagacttggatagtggttattgtagttaggctaattc-aaatagcactactttaaaccgtagaatgaataatcaa |
957 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2429010 |
tacttaacctcaacaagtgagcaaagacttggatagtggttattgaagttaggctaattcaaaatagcactactttaaaccgtagaatgaataatcaa |
2428913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 8 - 413
Target Start/End: Complemental strand, 2436205 - 2435800
Alignment:
| Q |
8 |
caacaacaaccacttgtttaccaacattttgaccactaaacagaccaaccaaagctgcagggccattctcaagaccctcagctatgtcttccacatacac |
107 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||| | || |||| ||| || ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2436205 |
caacagcaaccacttgtttaccaacattgcgaccactatataggccaatcaatgcagcaggaccattctcaagaccctcagctatgtcttccacatacac |
2436106 |
T |
|
| Q |
108 |
aacctttccttctcttataagaggcagcataaactccaagaattttgtataaagatgatagtattcaaatacagcaaaaccttccatccggatccgctta |
207 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||| |||| ||| ||| | ||||||| || ||||| ||||||||| |
|
|
| T |
2436105 |
aacctttccttctcttataagaggcaggacaaactccaagaattttgtataaaggtgaaagtaatcagatataacaaaaccctcgatccgaatccgctta |
2436006 |
T |
|
| Q |
208 |
tatatgatatgtgccaaatttgtgacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatccgcccatggagtttcatattca |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| | ||||||||| |
|
|
| T |
2436005 |
tatatgatttgtgccaaatttgtgacaccttcaggttgagtaagattgtactgtgagatcattccacttacaggtatgcggccatggactctcatattca |
2435906 |
T |
|
| Q |
308 |
agagtacagcatcaagtgtctttccccccacattctcaaagtaaatgtcaatgccttctggaaagtatctagtttacataaattgatatctactagttat |
407 |
Q |
| |
|
| ||||||||||||||||| || || || |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||| |
|
|
| T |
2435905 |
aaagtacagcatcaagtgttttcccaccaacattctcaaagtaaatgtcaatgccttctggaaagtacctaatatacataaattgatatcccatagttat |
2435806 |
T |
|
| Q |
408 |
tagtgt |
413 |
Q |
| |
|
|||||| |
|
|
| T |
2435805 |
tagtgt |
2435800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 8 - 397
Target Start/End: Original strand, 2516150 - 2516539
Alignment:
| Q |
8 |
caacaacaaccacttgtttaccaacattttgaccactaaacagaccaaccaaagctgcagggccattctcaagaccctcagctatgtcttccacatacac |
107 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||| | |||||||| |||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2516150 |
caacaacaaccacttgtttaccaacattgcgaccgctaaagatgccaaccaaggctgcaggacctttctcaagaccctcagctatgtcttccacatacac |
2516249 |
T |
|
| Q |
108 |
aacctttccttctcttataagaggcagcataaactccaagaattttgtataaagatgatagtattcaaatacagcaaaaccttccatccggatccgctta |
207 |
Q |
| |
|
|||| | |||||||||||| ||||||| | |||||| |||||||| || || |||||||| || | | ||| | ||||||| ||| || ||||||||| |
|
|
| T |
2516250 |
aaccctaccttctcttatatgaggcaggacaaactctaagaatttggtgtatagatgataataattagctacggtgaaaccttgcatacgaatccgctta |
2516349 |
T |
|
| Q |
208 |
tatatgatatgtgccaaatttgtgacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatccgcccatggagtttcatattca |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
2516350 |
tatatgatatgtgccaaatttgtgacaccttcaggttgagtaagattatactgtgagatcattccacacacaggtatgcggccatggagtttcatattca |
2516449 |
T |
|
| Q |
308 |
agagtacagcatcaagtgtctttccccccacattctcaaagtaaatgtcaatgccttctggaaagtatctagtttacataaattgatatc |
397 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
2516450 |
agagtacagcatcaagtgtctttcccccaacattctcaaagtaaatgtcaatgccttctggaaagtacctaatttacataaattgatatc |
2516539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 8 - 397
Target Start/End: Complemental strand, 2432844 - 2432455
Alignment:
| Q |
8 |
caacaacaaccacttgtttaccaacattttgaccactaaacagaccaaccaaagctgcagggccattctcaagaccctcagctatgtcttccacatacac |
107 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| | || |||| ||| || ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2432844 |
caacaacaaccacttgtttaccaacattgcgaccactgtataggccaatcaatgcagcaggaccattctcaagaccctcagctatgtcttccacatacac |
2432745 |
T |
|
| Q |
108 |
aacctttccttctcttataagaggcagcataaactccaagaattttgtataaagatgatagtattcaaatacagcaaaaccttccatccggatccgctta |
207 |
Q |
| |
|
|| |||||||||||||||||||||||| | ||| |||||||||||||||||||| ||| |||| ||| ||| | ||||||| || | ||| ||||||||| |
|
|
| T |
2432744 |
aatctttccttctcttataagaggcaggacaaattccaagaattttgtataaaggtgaaagtaatcagatataacaaaaccctcgaaccgaatccgctta |
2432645 |
T |
|
| Q |
208 |
tatatgatatgtgccaaatttgtgacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatccgcccatggagtttcatattca |
307 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| || ||||||||||||||||||| |
|
|
| T |
2432644 |
tatatgatttgtgccaaatttgtgacaccttcaggttgagtgagattatactgtgagatcattccacttacaggtatgcggccatggagtttcatattca |
2432545 |
T |
|
| Q |
308 |
agagtacagcatcaagtgtctttccccccacattctcaaagtaaatgtcaatgccttctggaaagtatctagtttacataaattgatatc |
397 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||| |
|
|
| T |
2432544 |
agagtacagcgtcaagtgtctttcccccaacattctcaaagtaaatgtcaatgccttctggaaagtacctaatttacatacattgatatc |
2432455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 8 - 373
Target Start/End: Original strand, 2511879 - 2512244
Alignment:
| Q |
8 |
caacaacaaccacttgtttaccaacattttgaccactaaacagaccaaccaaagctgcagggccattctcaagaccctcagctatgtcttccacatacac |
107 |
Q |
| |
|
||||||||| ||||||||| |||||||||| ||||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2511879 |
caacaacaagcacttgtttgccaacatttttaccactaaatatgccaaccaaagctgcaggacctttctcaagaccctcagctatgtcttccacatacac |
2511978 |
T |
|
| Q |
108 |
aacctttccttctcttataagaggcagcataaactccaagaattttgtataaagatgatagtattcaaatacagcaaaaccttccatccggatccgctta |
207 |
Q |
| |
|
|||||| |||||||| ||| ||||||| | || || ||||| || | ||| ||||||||||| |||| ||| ||||||||| || || ||||||||| |
|
|
| T |
2511979 |
aaccttcccttctctgatatgaggcaggacgaagtctaagaacttggcatatagatgatagtaatcaactacgacaaaaccttgcaaacgaatccgctta |
2512078 |
T |
|
| Q |
208 |
tatatgatatgtgccaaatttgtgacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatccgcccatggagtttcatattca |
307 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||| |
|
|
| T |
2512079 |
tatatgatatgtgccaaatttgttacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatgcgaccatgtagtttcatgttca |
2512178 |
T |
|
| Q |
308 |
agagtacagcatcaagtgtctttccccccacattctcaaagtaaatgtcaatgccttctggaaagt |
373 |
Q |
| |
|
||||||| |||||||||||||| || || || ||||||||||||| |||||| ||||||||||||| |
|
|
| T |
2512179 |
agagtacggcatcaagtgtcttgcctccaacgttctcaaagtaaacgtcaattccttctggaaagt |
2512244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 8 - 373
Target Start/End: Original strand, 2505258 - 2505623
Alignment:
| Q |
8 |
caacaacaaccacttgtttaccaacattttgaccactaaacagaccaaccaaagctgcagggccattctcaagaccctcagctatgtcttccacatacac |
107 |
Q |
| |
|
||||||||| ||||||||| |||||||||| |||||||| | |||||||| ||| ||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
2505258 |
caacaacaagcacttgtttgccaacatttttgccactaaatatgccaaccaaggcttcagggcctttctcaagaccctcagctatgtcttctacatacac |
2505357 |
T |
|
| Q |
108 |
aacctttccttctcttataagaggcagcataaactccaagaattttgtataaagatgatagtattcaaatacagcaaaaccttccatccggatccgctta |
207 |
Q |
| |
|
|||||| |||||||| ||| ||||||| | |||||||||||||||| || ||||||||||| ||| |||| |||||||| || |||| ||||||| |
|
|
| T |
2505358 |
aaccttcccttctctgatatgaggcaggacaaactccaagaattttccgtatagatgatagtaatcagctacaataaaaccttgcaaacggacccgctta |
2505457 |
T |
|
| Q |
208 |
tatatgatatgtgccaaatttgtgacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatccgcccatggagtttcatattca |
307 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || || | | |||| |||| |
|
|
| T |
2505458 |
tatacgatatgtgccaaatttgtcacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatgcgaccttgtaatctcatgttca |
2505557 |
T |
|
| Q |
308 |
agagtacagcatcaagtgtctttccccccacattctcaaagtaaatgtcaatgccttctggaaagt |
373 |
Q |
| |
|
||||||| |||||||||||||| || || || ||||||||||||| ||||||||||||||||||| |
|
|
| T |
2505558 |
agagtacggcatcaagtgtcttgccaccgacgttctcaaagtaaacatcaatgccttctggaaagt |
2505623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 8 - 365
Target Start/End: Original strand, 2496577 - 2496934
Alignment:
| Q |
8 |
caacaacaaccacttgtttaccaacattttgaccactaaacagaccaaccaaagctgcagggccattctcaagaccctcagctatgtcttccacatacac |
107 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||| | || |||| ||| |||||||||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
2496577 |
caacgacaaccacttgtttaccaacattgcgaccactatataggccaatcaaggctgcagggccattctcaagaccctcagttatgtcttcaacatacac |
2496676 |
T |
|
| Q |
108 |
aacctttccttctcttataagaggcagcataaactccaagaattttgtataaagatgatagtattcaaatacagcaaaacc-ttccatccggatccgctt |
206 |
Q |
| |
|
|| ||| || ||||| ||| |||| || | ||||||||| ||||| | || || ||| || | ||| || | ||||| |||||| || |||||||| |
|
|
| T |
2496677 |
aatcttcccatctctgatatgagggaggacaaactccaacaatttaggatttaggtgaaagaaatcagc-actgttaaacccttccatgcgaatccgctt |
2496775 |
T |
|
| Q |
207 |
atatatgatatgtgccaaatttgtgacaccttcaggttgagtaagattgtactgtgagatcattccacacacaggtatccgcccatggagtttcatattc |
306 |
Q |
| |
|
||||||||||||||||||||| || ||| |||||||||| ||||||||||||||||||||||||||||| ||||||| || || |||| | |||| ||| |
|
|
| T |
2496776 |
atatatgatatgtgccaaattcgttacagcttcaggttgcgtaagattgtactgtgagatcattccacatgcaggtatgcggccgtggactctcatgttc |
2496875 |
T |
|
| Q |
307 |
aagagtacagcatcaagtgtctttccccccacattctcaaagtaaatgtcaatgccttc |
365 |
Q |
| |
|
||||||||||||||||||||||| || || ||||||||||||||||| ||||||||||| |
|
|
| T |
2496876 |
aagagtacagcatcaagtgtcttgcctccaacattctcaaagtaaatatcaatgccttc |
2496934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 500 - 609
Target Start/End: Complemental strand, 1459668 - 1459559
Alignment:
| Q |
500 |
aaatagaagtgagtctatgcaatcacaagagacgctgttatgttggtgtcagatattaacacgtgtcgaacacgccttgaatatatagttttgatgctag |
599 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
1459668 |
aaatagaagtgagtgtatgcaatcacaagagacgctgttatgttggtgtcagatattaacacgtgtcggacacgccttgaatatatagtgttgatgctag |
1459569 |
T |
|
| Q |
600 |
gtaactatac |
609 |
Q |
| |
|
|||| ||||| |
|
|
| T |
1459568 |
gtaagtatac |
1459559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 664 - 788
Target Start/End: Complemental strand, 2432128 - 2432004
Alignment:
| Q |
664 |
cagaccttttcaaagctgcattgagttctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctggtgtgtcgt |
763 |
Q |
| |
|
|||||||||| |||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| ||||| | | |
|
|
| T |
2432128 |
cagacctttttaaagctgcattgaggtcaggttcttctttgtagttaaatgcttcatcatatccaaatttattcttcaaaagatccaccttgtgtgccat |
2432029 |
T |
|
| Q |
764 |
aattatattcatttagtataattat |
788 |
Q |
| |
|
|||| |||||||| ||||||||| |
|
|
| T |
2432028 |
aattcagttcatttaatataattat |
2432004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 664 - 759
Target Start/End: Complemental strand, 2435563 - 2435468
Alignment:
| Q |
664 |
cagaccttttcaaagctgcattgagttctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctggtgtg |
759 |
Q |
| |
|
|||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||| ||||| |
|
|
| T |
2435563 |
cagacctttttaaagttgcattgaggtctggttcttctttgtagttaaaggcttcatcatatccaaatttattcttcaacagatctacctagtgtg |
2435468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 666 - 756
Target Start/End: Original strand, 2505711 - 2505801
Alignment:
| Q |
666 |
gaccttttcaaagctgcattgagttctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctggt |
756 |
Q |
| |
|
||||||||||| | ||||||||| ||| | |||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||| |
|
|
| T |
2505711 |
gaccttttcaatgttgcattgaggtcttgctcttctttgtagttaatggcttcatcgtatccaaatttattcttcaacagatccacctggt |
2505801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 666 - 756
Target Start/End: Original strand, 2512369 - 2512459
Alignment:
| Q |
666 |
gaccttttcaaagctgcattgagttctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctggt |
756 |
Q |
| |
|
||||||||||| ||||||| || ||| |||||||||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||| |
|
|
| T |
2512369 |
gaccttttcaatgctgcatccaggtcttgttcttctttgtagttaatggcttcatcgtatccaaatttattcttcaacagatccacctggt |
2512459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 666 - 756
Target Start/End: Original strand, 2516645 - 2516735
Alignment:
| Q |
666 |
gaccttttcaaagctgcattgagttctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctggt |
756 |
Q |
| |
|
|||||||| || ||||||||||| || |||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||||||| |
|
|
| T |
2516645 |
gacctttttaatgctgcattgaggtcatgttcttctttgtagttaatggcttcatcgtatccaaatttattttttaacatatccacctggt |
2516735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 389 - 440
Target Start/End: Complemental strand, 1459725 - 1459674
Alignment:
| Q |
389 |
attgatatctactagttattagtgtgtctcattttaccaggtaactatctat |
440 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1459725 |
attgatatctactggttattagtgtgtctcattttacctggtaactatctat |
1459674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 826 - 923
Target Start/End: Complemental strand, 2431990 - 2431893
Alignment:
| Q |
826 |
aaatttaaaatagtattttgtatcataatcaaactaacttaacctcaacaagtgagcaaagacttggatagtggttattgtagttaggctaattcaaa |
923 |
Q |
| |
|
||||| |||||||||||||||| |||| |||| ||||| || |||| ||||||| |||||| ||||| |||||||||||| ||||||| ||||||| |
|
|
| T |
2431990 |
aaattgaaaatagtattttgtaatataaccaaattaactaaatctcaccaagtgaataaagacatggattgtggttattgtaattaggctcattcaaa |
2431893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 667 - 754
Target Start/End: Original strand, 2497093 - 2497180
Alignment:
| Q |
667 |
accttttcaaagctgcattgagttctggttcttctttgtagttaaaggcttcatcatatccaaatttatttttcaacaaatccacctg |
754 |
Q |
| |
|
|||||||||||||||||| ||| || || ||||| |||||||| || || ||||| ||||||||||||| ||||| | ||||||||| |
|
|
| T |
2497093 |
accttttcaaagctgcatcgaggtcaggctcttccttgtagttgaaacctccatcaaatccaaatttattcttcaaaagatccacctg |
2497180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 323
Target Start/End: Complemental strand, 32260106 - 32260020
Alignment:
| Q |
237 |
ttcaggttgagtaagattgtactgtgagatcattccacacacaggtatccgcccatggagtttcatattcaagagtacagcatcaag |
323 |
Q |
| |
|
|||||| |||| |||||||||||| || ||||||||||| | || || || ||||||||||||||||| | |||||| |||||||| |
|
|
| T |
32260106 |
ttcaggatgaggaagattgtactgggaaatcattccacatatagcaatgcgaccatggagtttcatatttaggagtactgcatcaag |
32260020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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