View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5316-Insertion-1 (Length: 158)
Name: NF5316-Insertion-1
Description: NF5316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5316-Insertion-1 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 141; Significance: 3e-74; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 141; E-Value: 3e-74
Query Start/End: Original strand, 14 - 158
Target Start/End: Original strand, 28280755 - 28280899
Alignment:
| Q |
14 |
gctttacatacattcccgctacacatacattctcactcaccatttcaaatcaagctttattttgtgaataacagtaaagaaaatggcttcttcatcttcc |
113 |
Q |
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| T |
28280755 |
gctttacatacattcccgctacacatacattctcactcaccatttcaaatcaagctttgttttgtgaataacagtaaagaaaatggcttcttcatcttcc |
28280854 |
T |
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| Q |
114 |
aaacctgatcatgcttccaaggacatgaaaaccgatggctcctcc |
158 |
Q |
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| T |
28280855 |
aaacctgatcatgcttccaaggacatgaaaaccgatggctcctcc |
28280899 |
T |
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