View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5316-Insertion-4 (Length: 868)

Name: NF5316-Insertion-4
Description: NF5316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5316-Insertion-4
NF5316-Insertion-4
[»] chr3 (45 HSPs)
chr3 (8-303)||(29555247-29555542)
chr3 (559-684)||(29555090-29555214)
chr3 (756-868)||(29554910-29555022)
chr3 (371-551)||(30801648-30801828)
chr3 (405-552)||(52629304-52629451)
chr3 (378-556)||(53982011-53982189)
chr3 (373-557)||(8076392-8076576)
chr3 (373-556)||(33118767-33118951)
chr3 (378-556)||(33644200-33644378)
chr3 (378-556)||(54868817-54868995)
chr3 (378-556)||(17470405-17470583)
chr3 (371-556)||(20764830-20765015)
chr3 (371-556)||(35536626-35536811)
chr3 (378-556)||(49607414-49607592)
chr3 (408-551)||(31456694-31456837)
chr3 (372-558)||(51419276-51419462)
chr3 (371-561)||(26141445-26141637)
chr3 (371-556)||(41189679-41189864)
chr3 (374-556)||(11347840-11348022)
chr3 (374-556)||(14623757-14623939)
chr3 (371-553)||(26754698-26754880)
chr3 (378-556)||(36707350-36707524)
chr3 (372-556)||(45058469-45058652)
chr3 (374-556)||(8956762-8956944)
chr3 (378-551)||(48587023-48587186)
chr3 (302-373)||(29555212-29555283)
chr3 (374-556)||(35965700-35965874)
chr3 (372-553)||(42823114-42823295)
chr3 (396-556)||(9562999-9563159)
chr3 (371-557)||(47531864-47532050)
chr3 (371-536)||(13897970-13898135)
chr3 (371-556)||(24699870-24700054)
chr3 (453-556)||(27714888-27714991)
chr3 (480-566)||(11095377-11095463)
chr3 (430-556)||(48375680-48375806)
chr3 (440-556)||(11907371-11907487)
chr3 (406-548)||(39670019-39670161)
chr3 (371-515)||(1758374-1758515)
chr3 (405-526)||(36331278-36331399)
chr3 (374-556)||(35093585-35093767)
chr3 (430-558)||(41080707-41080833)
chr3 (477-536)||(43745766-43745825)
chr3 (8-133)||(50295459-50295580)
chr3 (405-470)||(21746137-21746202)
chr3 (371-460)||(43746435-43746524)
[»] chr8 (36 HSPs)
chr8 (374-556)||(10284549-10284731)
chr8 (378-556)||(12831047-12831225)
chr8 (378-556)||(504043-504221)
chr8 (378-561)||(34012218-34012401)
chr8 (378-556)||(23122519-23122697)
chr8 (396-556)||(44507027-44507187)
chr8 (378-549)||(14547929-14548100)
chr8 (377-556)||(40423864-40424043)
chr8 (378-556)||(15197333-15197511)
chr8 (374-556)||(37038479-37038661)
chr8 (375-551)||(5957835-5958011)
chr8 (369-537)||(8841345-8841513)
chr8 (373-556)||(15048098-15048281)
chr8 (373-556)||(43414498-43414681)
chr8 (411-557)||(1179895-1180041)
chr8 (374-556)||(4854781-4854963)
chr8 (378-556)||(30479396-30479574)
chr8 (372-561)||(15258845-15259034)
chr8 (377-556)||(16056322-16056501)
chr8 (416-554)||(10621047-10621185)
chr8 (396-512)||(9122229-9122345)
chr8 (378-566)||(24307715-24307903)
chr8 (378-556)||(34307216-34307394)
chr8 (412-556)||(16383377-16383521)
chr8 (371-504)||(42354503-42354636)
chr8 (387-557)||(14055523-14055693)
chr8 (405-556)||(42221515-42221666)
chr8 (373-563)||(20074869-20075041)
chr8 (376-556)||(17443825-17444005)
chr8 (374-556)||(32032725-32032906)
chr8 (374-484)||(40467772-40467882)
chr8 (374-460)||(32707921-32708007)
chr8 (396-460)||(42710234-42710298)
chr8 (497-556)||(24307629-24307688)
chr8 (63-120)||(20241876-20241933)
chr8 (63-120)||(20251134-20251191)
[»] chr2 (40 HSPs)
chr2 (387-556)||(33436031-33436200)
chr2 (378-556)||(10249304-10249482)
chr2 (378-556)||(13438343-13438521)
chr2 (378-556)||(32505570-32505748)
chr2 (405-556)||(30915463-30915614)
chr2 (374-556)||(20700815-20700997)
chr2 (378-551)||(28863460-28863633)
chr2 (396-556)||(9058480-9058640)
chr2 (378-556)||(17473020-17473198)
chr2 (378-556)||(40701478-40701656)
chr2 (378-551)||(19930742-19930915)
chr2 (378-556)||(7465657-7465835)
chr2 (405-556)||(4060685-4060836)
chr2 (373-556)||(40613819-40614002)
chr2 (374-556)||(36168836-36169018)
chr2 (378-561)||(28381577-28381760)
chr2 (373-556)||(42257193-42257376)
chr2 (371-556)||(38732354-38732539)
chr2 (396-556)||(38882751-38882913)
chr2 (428-556)||(26891476-26891604)
chr2 (373-556)||(2533124-2533306)
chr2 (374-556)||(43490121-43490303)
chr2 (447-556)||(5574479-5574588)
chr2 (374-556)||(38273061-38273242)
chr2 (396-556)||(27864704-27864851)
chr2 (413-556)||(17819961-17820104)
chr2 (371-539)||(2997402-2997570)
chr2 (371-525)||(41758616-41758772)
chr2 (372-550)||(3439985-3440163)
chr2 (430-556)||(33436211-33436337)
chr2 (375-471)||(44152012-44152108)
chr2 (405-556)||(45097684-45097835)
chr2 (373-556)||(13365351-13365536)
chr2 (416-551)||(41575142-41575278)
chr2 (374-513)||(3737986-3738125)
chr2 (373-470)||(17823874-17823971)
chr2 (374-502)||(3034901-3035029)
chr2 (63-121)||(8986122-8986180)
chr2 (387-462)||(2329352-2329431)
chr2 (69-139)||(38584277-38584347)
[»] chr1 (35 HSPs)
chr1 (378-556)||(9474798-9474976)
chr1 (374-556)||(32813247-32813429)
chr1 (396-556)||(2581915-2582075)
chr1 (378-556)||(27564657-27564835)
chr1 (378-556)||(41758805-41758983)
chr1 (374-556)||(51898601-51898783)
chr1 (387-556)||(50630458-50630627)
chr1 (405-557)||(3000318-3000470)
chr1 (378-556)||(48716204-48716382)
chr1 (396-556)||(38632261-38632421)
chr1 (405-556)||(38595154-38595305)
chr1 (371-561)||(45044475-45044665)
chr1 (378-556)||(47452242-47452420)
chr1 (396-556)||(43132-43292)
chr1 (372-556)||(5958916-5959100)
chr1 (407-530)||(13414787-13414910)
chr1 (376-556)||(49811447-49811627)
chr1 (378-556)||(37649198-37649376)
chr1 (396-556)||(8346327-8346488)
chr1 (374-555)||(44453980-44454165)
chr1 (423-551)||(44548343-44548471)
chr1 (374-556)||(50590918-50591100)
chr1 (371-536)||(11152293-11152458)
chr1 (372-556)||(47748443-47748626)
chr1 (396-556)||(7740733-7740893)
chr1 (378-551)||(26274437-26274607)
chr1 (374-556)||(37926356-37926538)
chr1 (376-556)||(23597011-23597191)
chr1 (374-556)||(6260870-6261052)
chr1 (374-556)||(41608411-41608593)
chr1 (405-562)||(3302482-3302639)
chr1 (372-556)||(26440734-26440908)
chr1 (374-515)||(44332289-44332430)
chr1 (29-99)||(19825152-19825221)
chr1 (56-99)||(2072461-2072504)
[»] scaffold0110 (1 HSPs)
scaffold0110 (372-556)||(8779-8963)
[»] chr4 (39 HSPs)
chr4 (378-556)||(6034044-6034222)
chr4 (378-556)||(48182971-48183149)
chr4 (372-556)||(31910192-31910376)
chr4 (405-556)||(480396-480547)
chr4 (378-557)||(41236346-41236525)
chr4 (373-556)||(50052345-50052528)
chr4 (378-556)||(24995029-24995207)
chr4 (371-556)||(29239886-29240071)
chr4 (405-556)||(11511411-11511562)
chr4 (405-556)||(42044316-42044467)
chr4 (396-556)||(54473473-54473633)
chr4 (373-556)||(50526088-50526271)
chr4 (374-518)||(41823920-41824064)
chr4 (416-556)||(29234205-29234345)
chr4 (376-556)||(40574779-40574959)
chr4 (371-556)||(19670631-19670816)
chr4 (375-556)||(48647645-48647826)
chr4 (372-556)||(3481654-3481828)
chr4 (396-556)||(23608235-23608395)
chr4 (374-556)||(50813810-50813992)
chr4 (374-556)||(55475191-55475373)
chr4 (371-556)||(47986208-47986392)
chr4 (371-539)||(17983658-17983826)
chr4 (373-563)||(29547876-29548066)
chr4 (430-552)||(53352540-53352661)
chr4 (372-556)||(28480184-28480368)
chr4 (372-556)||(28481059-28481243)
chr4 (372-556)||(28481934-28482118)
chr4 (376-556)||(29977885-29978065)
chr4 (377-529)||(47104571-47104723)
chr4 (422-557)||(8343129-8343264)
chr4 (373-556)||(32766958-32767141)
chr4 (368-556)||(18924407-18924595)
chr4 (371-526)||(29589655-29589810)
chr4 (373-556)||(44536663-44536845)
chr4 (377-460)||(56300086-56300169)
chr4 (63-121)||(16870560-16870618)
chr4 (422-556)||(55079679-55079814)
chr4 (56-110)||(54147572-54147626)
[»] chr7 (41 HSPs)
chr7 (373-556)||(21234401-21234584)
chr7 (405-556)||(38267040-38267191)
chr7 (378-556)||(8080305-8080483)
chr7 (374-556)||(46033719-46033901)
chr7 (400-556)||(35137533-35137689)
chr7 (405-556)||(38837217-38837368)
chr7 (378-556)||(4999436-4999614)
chr7 (378-556)||(19329842-19330020)
chr7 (387-556)||(19436118-19436287)
chr7 (405-556)||(40957707-40957858)
chr7 (396-570)||(7389375-7389548)
chr7 (371-555)||(35522877-35523061)
chr7 (412-551)||(3784000-3784139)
chr7 (397-551)||(32951434-32951588)
chr7 (371-556)||(8238212-8238398)
chr7 (405-551)||(3694372-3694518)
chr7 (374-556)||(26296644-26296826)
chr7 (374-556)||(38044197-38044379)
chr7 (378-556)||(11044188-11044356)
chr7 (374-556)||(22343361-22343543)
chr7 (374-556)||(41423682-41423864)
chr7 (423-556)||(36208173-36208306)
chr7 (447-556)||(36361904-36362013)
chr7 (378-556)||(36362026-36362192)
chr7 (375-527)||(16374743-16374895)
chr7 (376-556)||(41915741-41915921)
chr7 (378-556)||(3434562-3434730)
chr7 (373-556)||(31735884-31736060)
chr7 (372-522)||(27744225-27744375)
chr7 (374-556)||(35468773-35468955)
chr7 (371-556)||(32564341-32564526)
chr7 (371-556)||(40846028-40846213)
chr7 (376-556)||(7727906-7728086)
chr7 (396-556)||(18207180-18207339)
chr7 (376-556)||(39255844-39256023)
chr7 (375-515)||(2318160-2318302)
chr7 (464-558)||(46374810-46374904)
chr7 (373-438)||(46374741-46374806)
chr7 (63-121)||(46963923-46963981)
chr7 (378-438)||(36361847-36361907)
chr7 (63-120)||(44338199-44338256)
[»] chr5 (33 HSPs)
chr5 (378-561)||(33149560-33149743)
chr5 (378-556)||(2740274-2740452)
chr5 (378-551)||(18520806-18520979)
chr5 (376-556)||(35943812-35943992)
chr5 (378-556)||(35785199-35785377)
chr5 (387-556)||(36732873-36733042)
chr5 (387-549)||(13811659-13811821)
chr5 (378-556)||(14831814-14831992)
chr5 (374-556)||(15409528-15409710)
chr5 (378-556)||(40145407-40145585)
chr5 (373-556)||(31008988-31009171)
chr5 (375-556)||(6679698-6679879)
chr5 (761-866)||(42779650-42779755)
chr5 (421-556)||(28177775-28177910)
chr5 (372-556)||(26720516-26720700)
chr5 (372-556)||(26990265-26990449)
chr5 (372-484)||(2177436-2177548)
chr5 (372-556)||(3921181-3921365)
chr5 (373-556)||(2252085-2252268)
chr5 (371-556)||(6259916-6260101)
chr5 (373-529)||(20073433-20073589)
chr5 (429-556)||(42414275-42414402)
chr5 (373-561)||(39688814-39689002)
chr5 (408-551)||(36875564-36875698)
chr5 (375-556)||(33825243-33825424)
chr5 (374-512)||(21370048-21370186)
chr5 (376-556)||(9603813-9603993)
chr5 (465-548)||(41470425-41470508)
chr5 (446-508)||(31132392-31132454)
chr5 (451-536)||(16327921-16328006)
chr5 (63-120)||(24136719-24136776)
chr5 (56-120)||(11335480-11335543)
chr5 (56-110)||(9511733-9511787)
[»] chr6 (23 HSPs)
chr6 (378-549)||(32869685-32869856)
chr6 (396-551)||(22880598-22880753)
chr6 (378-556)||(17598554-17598732)
chr6 (374-556)||(31976248-31976430)
chr6 (378-556)||(11427616-11427796)
chr6 (378-556)||(15832577-15832755)
chr6 (405-551)||(23128076-23128222)
chr6 (413-556)||(6209422-6209565)
chr6 (371-556)||(31952945-31953130)
chr6 (378-556)||(29857827-29858005)
chr6 (373-556)||(30341277-30341460)
chr6 (374-556)||(15989960-15990142)
chr6 (371-556)||(15507939-15508124)
chr6 (407-544)||(31109351-31109488)
chr6 (374-556)||(31110679-31110859)
chr6 (374-556)||(4231548-4231730)
chr6 (389-549)||(946383-946543)
chr6 (396-551)||(28536428-28536581)
chr6 (424-552)||(9379680-9379808)
chr6 (387-512)||(30870058-30870183)
chr6 (434-556)||(12732482-12732604)
chr6 (56-130)||(21861953-21862027)
chr6 (374-419)||(22421997-22422042)
[»] scaffold0321 (1 HSPs)
scaffold0321 (405-556)||(10058-10209)
[»] scaffold1268 (1 HSPs)
scaffold1268 (375-556)||(848-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (375-556)||(848-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (378-556)||(4029-4207)
[»] scaffold0018 (1 HSPs)
scaffold0018 (375-526)||(152528-152679)
[»] scaffold0316 (1 HSPs)
scaffold0316 (447-526)||(17084-17163)


Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 8 - 303
Target Start/End: Complemental strand, 29555542 - 29555247
Alignment:
Q  8 cacttgactcactaagcaattaaattgtgagcacttaactcaccaactaaacaatcaaaccaattgtgagcactatcttaactcacccaacatccaaata 107  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29555542 cacttgactaactaagcaactaaattgtgagcaattaactcaccaactaaacaatcaaatcaattgtgagcactatcttaactcacccaacatccaaata 29555443  T
Q  108 aatcggaccaaactgaaccaaattaatctaaacaaaaccaaaccaagacaaattgaataacaccaatgcgaaccaatacgaatggagcaaaggagagacg 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29555442 aatcggaccaaactgaaccaaattaatctaaacaaaaccaaaccaagacaaattgaataacaccaatgcgaaccaatacgaatggaacaaaggagagacg 29555343  T
Q  208 caatgagagacaaacaaaaaactgacccaagccacaccaaatcaattagcttttcaccaaatacaatagaaccgtatcgtgttgtccaaataccaa 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29555342 caatgagagacaaacaaaaaactgacccaagccacaccaaatcaattagcttttcaccaaatacaatagaaccgtatcgtgttgtccaaataccaa 29555247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 559 - 684
Target Start/End: Complemental strand, 29555214 - 29555090
Alignment:
Q  559 aaattaataacacaacatattcataaattcaccaattcatggagacattcaaagttcaaacaaaatcactttgcaaagtcttcgaaatccatcttgcgat 658  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  29555214 aaattaataacacaacatattcataaattcaccaattcatggagacattcaaagttcaaacaaaatcaccttgcaaagtctt-gaaatccatcttgcgat 29555116  T
Q  659 ccaaaatttcttttagcaccggaggc 684  Q
    ||||||||||||||||||||||||||    
T  29555115 ccaaaatttcttttagcaccggaggc 29555090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 756 - 868
Target Start/End: Complemental strand, 29555022 - 29554910
Alignment:
Q  756 cattctcaaaatcaacataactagatgccaggaataagtacttcgtggccacacaaaaacaaaagacacaagacactcacatctcctcggacaacgcaag 855  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29555022 cattctcaaaatcaacataactagatgccaggaacaagtacttcgtggccacacaaaaacaaaagacacaagacactcacatctcctcggacaacacaag 29554923  T
Q  856 ccaaaacgtacaa 868  Q
    |||||||||||||    
T  29554922 ccaaaacgtacaa 29554910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 371 - 551
Target Start/End: Original strand, 30801648 - 30801828
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| | ||||||||| ||||||||||||||||||||||| |||||||    
T  30801648 aaaggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgtactaggaagagagaagatgagaggaaagagaaaatgtgcttgt 30801747  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    | | ||||||  ||||||| ||||| |||||| ||||||| |||||||||||||| |||| ||||||| ||||||||||||    
T  30801748 gtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcat 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 405 - 552
Target Start/End: Complemental strand, 52629451 - 52629304
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||| |||||| |    
T  52629451 atacacccttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgt 52629352  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcata 552  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||||    
T  52629351 gtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 53982189 - 53982011
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 53982090  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  53982089 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 373 - 557
Target Start/End: Complemental strand, 8076576 - 8076392
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| |||||||  |||||||| ||||||  ||||||| |||||||| ||||||||| ||||| ||||||||||||||| | |||||||||    
T  8076576 aggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 8076477  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 557  Q
    | ||||||||||||||||||| | |||||| |||||||||||||||||||| || ||| ||||||| | |||||||||| |||||    
T  8076476 ggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactcg 8076392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 33118767 - 33118951
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaag-atgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||||||||||  ||||||   ||||||||||||||| |||||||| |||| |||| |||| | ||||||||||||||| | || || ||    
T  33118767 aggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatgcactagggagagagaaggaggagaggaaagagaaagtgtgtttctg 33118866  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  33118867 agggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 33644378 - 33644200
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  |||||||||| |||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  33644378 aatgatacatagacaccctttattcccatacacccttatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 33644279  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| |||  |||||| |||||||||||| ||||    
T  33644278 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 54868817 - 54868995
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| ||||||| |||||||   ||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| | || ||||||| |||    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 54868916  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  54868917 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 17470583 - 17470405
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| |||||   |||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||| | |||    
T  17470583 aatgatacatagacaccatttattctcatacatatttgtacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgtggggt 17470484  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||| ||| ||||||||| ||| ||| ||| |||||||||||| ||||    
T  17470483 ccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 371 - 556
Target Start/End: Original strand, 20764830 - 20765015
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| |||||||  |||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||| | |||||||    
T  20764830 aaaggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgt 20764929  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     || |||||| ||| | |||||||| |||||| ||||||||| |||| |||||||  ||| ||||| | ||||||| |||||||||    
T  20764930 acggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 371 - 556
Target Start/End: Complemental strand, 35536811 - 35536626
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| |||||||  |||||||| |||||||||| |||| |||||||| ||||||||| |||||  ||| ||||||| || | |||||||    
T  35536811 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgt 35536712  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |  |||||||| |||| |||||||| |||||||||||||||||||| ||||||||| ||| ||||| | |||||||||||| ||||    
T  35536711 gtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 49607592 - 49607414
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  |||||||||||||||   ||||||||||||||||  |||| ||||| ||||||||| | |||||||| | | |    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggat 49607493  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  49607492 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 408 - 551
Target Start/End: Complemental strand, 31456837 - 31456694
Alignment:
Q  408 cacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtg 507  Q
    |||||||||||| ||||||||||||||||||  |||| ||||| ||||||||| | |||||||||| ||||||| ||||||||||||| |||||| ||||    
T  31456837 cacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtg 31456738  T
Q  508 ggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    ||||||||||||||||||| | | || |||| ||||||||||||    
T  31456737 ggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcat 31456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 372 - 558
Target Start/End: Original strand, 51419276 - 51419462
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| || |||| |||||||   ||||||||||||||| ||||| |||||||||||| ||| | ||||| ||||||||| | ||||||||    
T  51419276 aaggaaaatgttacataaacaccttttatttccatacacccttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgtg 51419375  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgt 558  Q
    || |||| | ||| | |||||||| |||||| ||||||||| ||||| ||||||||||  ||||| | |||||||||||||||||||    
T  51419376 cggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactcgt 51419462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 371 - 561
Target Start/End: Original strand, 26141445 - 26141637
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagg--gaagatgagaggaaagagaaaatatgctt 468  Q
    ||||||||||||||| |||||||  ||||||   |||||| |||||||| ||||| ||||||||||||   ||||| ||||| ||||||||| | |||||    
T  26141445 aaaggaaaatgttacatagacaccctttatttccatacactcttgtacaccccatacattaggaagagaaagaagaggagagaaaagagaaagtgtgctt 26141544  T
Q  469 gtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 561  Q
    ||| | |||||| ||||| |||||||| |||||| ||||||||| ||||||||||||| ||| ||||| | ||||||||||||||||| ||||    
T  26141545 gtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactcataaa 26141637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 371 - 556
Target Start/End: Original strand, 41189679 - 41189864
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| |||||||  ||||||   |||||| ||||||||  |||| |||||||||||  ||||| ||||| ||||||||| | |||||||    
T  41189679 aaaggaaaatgttacatagacaccctttatttccatacactcttgtacactccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgt 41189778  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| |||||| ||| | ||||||||||||||||||||||||||||| | ||||||| ||| ||||| | | |||||||||||||||    
T  41189779 gcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 11347840 - 11348022
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||| ||| |||||||  |||||||  |||||||||| |||| ||||| |||||||||||| ||||| ||||| ||||||||| | ||||| |||     
T  11347840 ggaaaatggtacatagacaccctttattcccatacacccttatacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttatgca 11347939  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||| | |||||||| |||||| ||||| ||||||||| ||||||||||| ||||| | |||||||||||||||||    
T  11347940 gggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 14623757 - 14623939
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||||||  |||||||| ||||| |||| |||| | |||||| ||| ||||| |||||  ||| |||||||||| | |||||||| |    
T  14623757 ggaaaatgttacatagacaccatttattctcatacatccttctacacctcatgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtg 14623856  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||| |||  || ||||| ||||||||||||||||||| |||||||||| ||| ||||| | |||||||||||| ||||    
T  14623857 aggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 371 - 553
Target Start/End: Complemental strand, 26754880 - 26754698
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| |||||||  ||||||   ||||||| ||||||| || ||    ||||||||| ||||| ||||||||||||||||| |||||||    
T  26754880 aaaggaaaatgttacatagacactctttatttccatacacctttgtacaccctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgt 26754781  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataa 553  Q
    ||| |||||| ||||| || ||||| |||||| ||||| |||| |||||||||||| ||| ||||||| |||||| |||||||    
T  26754780 gcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcataa 26754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 36707350 - 36707524
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| ||||||| ||||||||  |||||  |||||||| | |||||||||||||||| ||||| ||||| ||||||||| | |||    ||| | |    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgc----gcgggat 36707445  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||||||||||| |||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  36707446 ccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 372 - 556
Target Start/End: Original strand, 45058469 - 45058652
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| ||||||| ||||| |   ||||||| ||||||| |||||| ||||||||||| |||||  ||| |||||||||| ||| ||||||    
T  45058469 aaggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 45058568  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || ||||||  ||   || ||||| ||||||||||||||||| |||||||||||| ||| ||||||| | |||||||||||||||    
T  45058569 cggggtccatatggtcacatgtcagatttttatgtgggtgtc-aagggtgtattgccacctaagggtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 8956944 - 8956762
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||   |||||||| |||||||||| |||| ||  |||| ||||||||| |||||  ||| ||||||| || | ||||||||      
T  8956944 ggaaaatgttacatagacagcatttattctcatacacccttctacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgta 8956845  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||| |||  |||||||| |||||||||||||||||||||| ||||||| ||| ||||| | |||||||||||| ||||    
T  8956844 aggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 378 - 551
Target Start/End: Original strand, 48587023 - 48587186
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||| |||||||||||||||||||||||||||||| |||          |||||||| | | |||||||| | |    
T  48587023 aatgatacatagacaccctttattcccatatacccttgtacatcccatgcattaggaagagagaa----------aagagaaagtgtacttgtgcgggat 48587112  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||| ||||||||||||    
T  48587113 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcat 48587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 302 - 373
Target Start/End: Complemental strand, 29555283 - 29555212
Alignment:
Q  302 aatacaatagaacagtatcgtgttgtccaaataccaagagaacaaacccaataaatgagactatccatcaaa 373  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29555283 aatacaatagaaccgtatcgtgttgtccaaataccaagagaacaaacccaataaatgaaactatccatcaaa 29555212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 35965700 - 35965874
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||| | |||| |||| ||| ||  |||| ||||||||||||||| | |||||||||     
T  35965700 ggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaattaagaaaagaaaagaggagaggaaagagaaagtgtgcttgtgca 35965799  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | |||        |||||||| |||||||||||||||||||||| |||||| |||||||||| | | |||||||||| ||||    
T  35965800 ggatcc--------acgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 553
Target Start/End: Complemental strand, 42823295 - 42823114
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  | | |||||||||| ||| ||| ||    
T  42823295 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaataagaaagagaaagtatacttatg 42823196  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataa 553  Q
    || ||||||  |||| || |||||||||||| |||||||||||| |||||||||  ||| ||| ||| | ||||||||||||    
T  42823195 cggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcataa 42823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 396 - 556
Target Start/End: Complemental strand, 9563159 - 9562999
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||  ||||||| ||||||| | |||||||||||||||| ||||| ||||| | ||||||| | || ||||||  | |||||||||||||||||||    
T  9563159 tttattcccatacacctttgtacaactcatgcattaggaagagagaagaggagagaagagagaaagtgtgtttgtgcaggatccacgtgactacgtgtca 9563060  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||||| ||| ||||||||| ||||||||||  ||| ||| | |||||||||| ||||    
T  9563059 gatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactc 9562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 371 - 557
Target Start/End: Complemental strand, 47532050 - 47531864
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| || ||||  |||||||  |||||| ||||||||| |||| |||||||||||| ||| | ||||| ||||||||| | |||||||    
T  47532050 aaaggaaaatgttacataaacaccctttattcccatacacacttgtacattccatacattaggaagagagaataggagagaaaagagaaagtgtgcttgt 47531951  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 557  Q
    ||| ||| ||  || | |||||||| ||| || ||||| ||| ||| ||||||||| ||  ||||| | ||||||||||||||||||    
T  47531950 gcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactcg 47531864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 371 - 536
Target Start/End: Original strand, 13897970 - 13898135
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    |||| |||||||||  |||||||  |||||||| ||||||  || |||| ||||| || |||| |||| |||||  ||| |||||||||| | |||||||    
T  13897970 aaagaaaaatgttagatagacaccatttattctcatacacttttctacaccccatacactagggagagagaagagaagatgaaagagaaagtgtgcttgt 13898069  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg 536  Q
    | ||||||||| |||  |||||||| ||||||||||||||||||| |||||||||| ||| |||||    
T  13898070 gtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagg 13898135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 371 - 556
Target Start/End: Original strand, 24699870 - 24700054
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| ||||||  ||||||||| ||||| | || |||| | |||  | ||||||||| ||||| ||||||||||||||| | || ||||    
T  24699870 aaaggaaaatgttacatagacatcttttattctcatacatc-ttatacacctcataaactaggaagagagaagaggagaggaaagagaaagtgtgtttgt 24699968  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |  |||||||||| | ||||| || |||||||||||||||||||| ||||||||| ||  ||||| | |||||||||||| ||||    
T  24699969 acagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 453 - 556
Target Start/End: Original strand, 27714888 - 27714991
Alignment:
Q  453 aagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcata 552  Q
    |||||||| | |||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||  ||| ||| ||| ||||||||||||     
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcatt 27714987  T
Q  553 actc 556  Q
    ||||    
T  27714988 actc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 480 - 566
Target Start/End: Original strand, 11095377 - 11095463
Alignment:
Q  480 acgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaattaat 566  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| |||| ||| |||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttaatttaat 11095463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 430 - 556
Target Start/End: Original strand, 48375680 - 48375806
Alignment:
Q  430 taggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 529  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||| |||||| ||||| ||  |||| |||||| | ||| | |  | |||||||||||||    
T  48375680 taggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtca 48375779  T
Q  530 cttaagggtttctatgtatcataactc 556  Q
    | ||||||| |||||| ||||||||||    
T  48375780 cctaagggtgtctatgaatcataactc 48375806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 440 - 556
Target Start/End: Complemental strand, 11907487 - 11907371
Alignment:
Q  440 gaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtt 539  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||  |||| || ||||| |||||| |||| ||||  | | |||||||||||| |||||||     
T  11907487 gaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtg 11907388  T
Q  540 tctatgtatcataactc 556  Q
    |||||||||||||||||    
T  11907387 tctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 406 - 548
Target Start/End: Complemental strand, 39670161 - 39670019
Alignment:
Q  406 tacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatg 505  Q
    |||||||||||||||| ||| ||||| |||||| ||||| ||||| |||||| || | ||| ||| |||||||||| |||  |||||||||||||||||     
T  39670161 tacacccttgtacatctcatacattaagaagagagaagaggagagaaaagaggaagtgtgcgtgtacgaggtccacatgatcacgtgtcaaatttttata 39670062  T
Q  506 tgggtgtcaaagggtgtattgtcacttaagggtttctatgtat 548  Q
    | | |||||| || | ||||| ||| ||||| | |||||||||    
T  39670061 tagatgtcaagggatatattgccacataaggatgtctatgtat 39670019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 371 - 515
Target Start/End: Original strand, 1758374 - 1758515
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    |||| |||||||||| || ||||  |||||||  ||||||| ||||||| |||||||||||||||||| ||||| |||| |||||||||||| || ||||    
T  1758374 aaagaaaaatgttacataaacactgtttattc--atacacctttgtaca-cccatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgt 1758470  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 515  Q
    | |  |||||||| || |  ||||| |||||| ||||||||||||    
T  1758471 gtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaa 1758515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 405 - 526
Target Start/End: Original strand, 36331278 - 36331399
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||| ||||||  || | || ||||| |||||| |    
T  36331278 atacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgt 36331377  T
Q  505 gtgggtgtcaaagggtgtattg 526  Q
    ||||||||||| ||||| ||||    
T  36331378 gtgggtgtcaaggggtgcattg 36331399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 35093767 - 35093585
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||   |||||||| ||||||| ||||||||| |||||| ||||||||| ||| |  ||| | |||||||| | |||||||  |    
T  35093767 ggaaaatgttacctagacatcatttattctcatacacctttgtacatctcatgcactaggaagagagaaaaaaagatgcaagagaaagtgtgcttgtatg 35093668  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
      || ||| |||| || ||||| ||||||  |||| ||||||| | ||||||||||| ||| | | |||||||||| ||||||    
T  35093667 gagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgtaactc 35093585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 430 - 558
Target Start/End: Complemental strand, 41080833 - 41080707
Alignment:
Q  430 taggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 529  Q
    ||||||||| ||||| |||| |||||||||||| |||||||| | ||||||| |||| || | ||| ||||||  |||||||||||||||||| |||  |    
T  41080833 taggaagagagaagaggagatgaaagagaaaatgtgcttgtgtg-ggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta 41080735  T
Q  530 cttaagggtttctatgtatcataactcgt 558  Q
    | ||||| | |||||||||||| ||||||    
T  41080734 c-taaggatgtctatgtatcattactcgt 41080707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 477 - 536
Target Start/End: Complemental strand, 43745825 - 43745766
Alignment:
Q  477 tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg 536  Q
    |||||||||  |||||||||||||||| |||| |||||||| |||||||| |||||||||    
T  43745825 tccacgtgatgacgtgtcaaatttttacgtggatgtcaaagagtgtattgccacttaagg 43745766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 50295580 - 50295459
Alignment:
Q  8 cacttgactcactaagcaattaaattgtgagcacttaactcaccaactaaacaatcaaaccaattgtgagcactatcttaactcacccaacatccaaata 107  Q
    |||| ||||||| || |||  ||||||||||||||| || ||| ||  |||||||||    ||||||| ||||||||| |||||| |||||| ||||| |    
T  50295580 cactcgactcacgaaacaaccaaattgtgagcacttgacccactaaacaaacaatca----aattgtgtgcactatctcaactcatccaacaaccaaaca 50295485  T
Q  108 aatcggaccaaactgaaccaaattaa 133  Q
    ||| | ||||||| |||| |||||||    
T  50295484 aattgaaccaaacagaacgaaattaa 50295459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 470
Target Start/End: Original strand, 21746137 - 21746202
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| | |||  ||| ||||||| |||||||||| |||||||||| | |||||||    
T  21746137 atacacccttgtacacctcatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 21746202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 371 - 460
Target Start/End: Complemental strand, 43746524 - 43746435
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaa 460  Q
    |||| |||||||||| || ||||  ||| || | ||||||||||||||| | |||||| ||||||||  ||||| |||| ||||||||||    
T  43746524 aaagaaaaatgttacataaacaccctttgttgtcatacacccttgtacacctcatgcactaggaagaaagaagaggagatgaaagagaaa 43746435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 2e-67; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 10284549 - 10284731
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||| |||||||| ||||||||| |||||||| |||||||||||| | ||||||||||    
T  10284549 ggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgtgcg 10284648  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  10284649 gggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 12831225 - 12831047
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 12831126  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  12831125 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 504043 - 504221
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||  | |||||||||| |||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggt 504142  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  504143 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 378 - 561
Target Start/End: Original strand, 34012218 - 34012401
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  ||||||||  |||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  34012218 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 34012317  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 561  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||| |||| ||||    
T  34012318 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcataaa 34012401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 23122519 - 23122697
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||| | ||||| ||||||||| | ||||| |||| |||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggt 23122618  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||    
T  23122619 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 396 - 556
Target Start/End: Original strand, 44507027 - 44507187
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||||||||| || |||||||||||||||||||||    
T  44507027 tttattctcatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtca 44507126  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||||||||| |||| |||||||  ||| ||||||| |||||||||||| ||||    
T  44507127 gatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 378 - 549
Target Start/End: Complemental strand, 14548100 - 14547929
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  14548100 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 14548001  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatc 549  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| ||||||||||    
T  14548000 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 377 - 556
Target Start/End: Original strand, 40423864 - 40424043
Alignment:
Q  377 aaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgagg 476  Q
    ||||| ||| ||||||| ||||||||  ||||||||||||||| | |||| ||||||||||| ||||| ||||| ||||||||| | |||||||||| ||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggg 40423963  T
Q  477 tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||| ||||||||||||| |||||| ||||| ||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  40423964 tccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 15197511 - 15197333
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| ||||||| ||||||||  ||||||||||||||| | |||||||| |||||||  |||| ||||| ||||||||| | |||||||||| |||    
T  15197511 aatgatacatagacactttttattcccatacacccttgtacacctcatgcatttggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 15197412  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| |||| || |||||||||||| ||||    
T  15197411 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 37038661 - 37038479
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| || ||||  ||||||  |||||||||||||||| |||||||| ||||||||| ||||| ||||||||| ||||| | ||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 37038562  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||| | | |||||||||||| ||||    
T  37038561 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 375 - 551
Target Start/End: Complemental strand, 5958011 - 5957835
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 474  Q
    ||||||||||| || ||||  |||||||| ||||||||||||||| | |||||| ||||||||| ||||| ||||||||||||||| | || |||||||     
T  5958011 gaaaatgttacataaacaccctttattctcatacacccttgtacacctcatgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcgg 5957912  T
Q  475 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    | ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||  | ||||||||||||    
T  5957911 gatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcat 5957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 369 - 537
Target Start/End: Original strand, 8841345 - 8841513
Alignment:
Q  369 tcaaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgctt 468  Q
    |||| |||||||||||| |||||||  |||||||| |||||| |||||||| |||||||| |||||| || ||||| ||||||||||||||| | |||||    
T  8841345 tcaatggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatgcactaggaaaagagaagaggagaggaaagagaaagtgtgctt 8841444  T
Q  469 gtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaaggg 537  Q
    ||||| ||||||||||||||||||| | |||||| |||||||||||||||||||| || ||| ||||||    
T  8841445 gtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 15048098 - 15048281
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgaga-ggaaagagaaaatatgcttgtg 471  Q
    ||||||||||||  |||||||  |||||||  ||||||||||||||||||||| |||||||||||| ||||| ||||   ||||||||| | ||||||||    
T  15048098 aggaaaatgttatatagacaccctttattccgatacacccttgtacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtg 15048197  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || |||||| ||| |||||||||| |||||| ||| ||||||||||||||||||| ||| ||||| | |||||||||||||||||    
T  15048198 cggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 43414498 - 43414681
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| |||||||  ||||||   ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | |||||||||    
T  43414498 aggaaaatgttacatagacaccctttattgccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 43414597  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | | |||| ||||| |||||| | |||||| ||||||||||||||||||| ||| ||  ||||| | |||||||||||||||||    
T  43414598 gggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 411 - 557
Target Start/End: Original strand, 1179895 - 1180041
Alignment:
Q  411 ccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggt 510  Q
    ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | ||||||||||   ||||| ||||||||||||| |||||| |||||||    
T  1179895 ccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggt 1179994  T
Q  511 gtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 557  Q
    |||||||||||||||  ||| ||||||| |||||||||||| |||||    
T  1179995 gtcaaagggtgtattaccacctaagggtgtctatgtatcattactcg 1180041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 4854781 - 4854963
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||||||  |||||||| ||| ||||||||||||||||| |||||| ||||| ||||| ||||| ||||||||| | |||||||||     
T  4854781 ggaaaatgttacatagacactctttattctcatatacccttgtacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgca 4854880  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||| | || | ||| |||||||||| ||||| ||||||||||||| ||| ||||| | |||||||||||| ||||    
T  4854881 gggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 30479396 - 30479574
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | ||||||||||||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgaggt 30479495  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||  |  | || ||||| |||||||||||| ||||||||||||||||| ||| ||||||| | |||||||||||||||    
T  30479496 ccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 372 - 561
Target Start/End: Original strand, 15258845 - 15259034
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| |||||||  ||||||   ||||||  |||||||||| ||    ||||||||| ||||| ||||||||||||||||| ||||||||    
T  15258845 aaggaaaatgttacatagacaccctttatttccatacacttttgtacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 15258944  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 561  Q
    |  |||||||||||| || ||||| |||||||||||| |||| | || ||||||| ||  |||| || ||||||||||||||||| ||||    
T  15258945 cagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactcttaaa 15259034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 377 - 556
Target Start/End: Original strand, 16056322 - 16056501
Alignment:
Q  377 aaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgagg 476  Q
    ||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||| ||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcgggg 16056421  T
Q  477 tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||  || | || ||||| |||||| |||||||||||| || ||||||||||| ||||| | | |||||||||||||||    
T  16056422 tccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 416 - 554
Target Start/End: Original strand, 10621047 - 10621185
Alignment:
Q  416 tacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 515  Q
    ||||||||||  ||||||||||| ||||| ||||| ||||||||| | |||||||||| | || | ||| |||||||||| |||||| ||||||||||||    
T  10621047 tacatcccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaa 10621146  T
Q  516 agggtgtattgtcacttaagggtttctatgtatcataac 554  Q
    ||||||||||  ||| ||||| | |||||||||||||||    
T  10621147 agggtgtattaccacctaaggatgtctatgtatcataac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 396 - 512
Target Start/End: Complemental strand, 9122345 - 9122229
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||  |||||| |||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | ||||||||||||| |||||    
T  9122345 tttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtca 9122246  T
Q  496 aatttttatgtgggtgt 512  Q
     |||||| |||||||||    
T  9122245 gatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 378 - 566
Target Start/End: Original strand, 24307715 - 24307903
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||| |||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 24307814  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaattaat 566  Q
    |||  || | || | ||| |||||| |||||||||||| || ||||||| ||| ||||||| | ||||||||||||||| |||| ||||    
T  24307815 ccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactcttaaaataat 24307903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 34307394 - 34307216
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||||| |||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggt 34307295  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  34307294 tcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 412 - 556
Target Start/End: Complemental strand, 16383521 - 16383377
Alignment:
Q  412 cttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtg 511  Q
    |||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||| ||||||  || | || ||||| |||||| ||||||||    
T  16383521 cttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtg 16383422  T
Q  512 tcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||| |||||||||| ||| ||||||| | |||||||||||||||    
T  16383421 tcaaggggtgtattgccacctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 371 - 504
Target Start/End: Original strand, 42354503 - 42354636
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| |||||||  |||||||| |||||||||| |||| |||||||| ||||||||| |||||  ||| |||||||||| | ||||| |    
T  42354503 aaaggaaaatgttacatagacaccatttattctcatacacccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgcttat 42354602  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    | ||| ||||| |||  |||||||| ||||||||    
T  42354603 gtgagatccacatgaacacgtgtcagatttttat 42354636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 387 - 557
Target Start/End: Original strand, 14055523 - 14055693
Alignment:
Q  387 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc-gaggtccacgtga 485  Q
    |||||||  |||||||| ||||||| ||||| | | ||| ||||| |||||| |||||| |||||||||| ||| |  |||||||  | |||||||||||    
T  14055523 tagacactatttattctcatacacctttgtatacctcattcattaagaagagagaagatcagaggaaagaaaaagtg-gcttgtgtaggggtccacgtga 14055621  T
Q  486 ctacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 557  Q
    |||| ||| | |||||| ||||| |||||| | |||||||||||| ||||||| || |||||||||||||||    
T  14055622 ctacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactcg 14055693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 405 - 556
Target Start/End: Complemental strand, 42221666 - 42221515
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| || ||  ||| ||||||| |||||||||| |||||||||| | |||||||  | ||||||  ||| ||||||||| |||||| |    
T  42221666 atacacccttgtacaccctatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgt 42221567  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||| | |  ||||||||||| ||||| | | |||||||||| ||||    
T  42221566 gtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 563
Target Start/End: Original strand, 20074869 - 20075041
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| ||||||||||||||||| |||||||           |||| | ||||||||| |||||  |||||||||||||| | |||||||||    
T  20074869 aggaaaatgttacatagacacattttattctcatacacct----------catgaactaggaagagagaagagaagaggaaagagaaagtgtgcttgtgc 20074958  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaatt 563  Q
      ||||||||||        ||| ||||||||||||||||||||| |||||||| ||| ||||| | |||||||||||| |||| ||||||    
T  20074959 agggtccacgtg--------tcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactcataaatt 20075041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 376 - 556
Target Start/End: Complemental strand, 17444005 - 17443825
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    |||||||||| |||||||  |||||    ||||| ||||||||| | |||||| | ||||||| |||||  ||| |||||||||| | |  ||||| | |    
T  17444005 aaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactgggaagagagaagagaagatgaaagagaaagtgtctttgtgtggg 17443906  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||||||| ||||| |||||| |||| |||| ||   |||||||||||| ||||| | |||||||||||||||||    
T  17443905 gtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 32032906 - 32032725
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||  |||||||||| | | |||||||     
T  32032906 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaaggagaaagagaaagtgtacttgtgca 32032807  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | ||||  || | || ||||| |||||| ||||| |||| |||| ||||||| ||| ||||||| | |||||||||||||||    
T  32032806 ggatccatatggccacatgtcagatttttgtgtggatgtc-aaggatgtattgccacctaagggtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 374 - 484
Target Start/End: Complemental strand, 40467882 - 40467772
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| |||||| |  ||| |   ||||||| |||||  | ||||||||| ||||||||||||||||||||| | ||||||||||    
T  40467882 ggaaaatgttacatagacaccttttatccccataaatttttgtacaccccatagactaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcg 40467783  T
Q  474 aggtccacgtg 484  Q
    | |||||||||    
T  40467782 aagtccacgtg 40467772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 374 - 460
Target Start/End: Original strand, 32707921 - 32708007
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaa 460  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| ||||||||||    
T  32707921 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaa 32708007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 396 - 460
Target Start/End: Original strand, 42710234 - 42710298
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaa 460  Q
    |||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| |||||||||    
T  42710234 tttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaa 42710298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 497 - 556
Target Start/End: Complemental strand, 24307688 - 24307629
Alignment:
Q  497 atttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| |||||||||||| || ||||||| ||| ||||||| | |||||||||||||||    
T  24307688 atttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactc 24307629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 20241933 - 20241876
Alignment:
Q  63 caaaccaattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaac 120  Q
    ||||| ||||||||||||||| || |||||||||||| ||||| |||| | |||||||    
T  20241933 caaactaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 20241876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 20251134 - 20251191
Alignment:
Q  63 caaaccaattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaac 120  Q
    ||||| ||||||||||||||| || |||||||||||| ||||| |||| | |||||||    
T  20251134 caaactaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 20251191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 6e-55; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 387 - 556
Target Start/End: Original strand, 33436031 - 33436200
Alignment:
Q  387 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 486  Q
    ||||||| ||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||    
T  33436031 tagacaccttttattctcatacacccttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgac 33436130  T
Q  487 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||| | |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  33436131 tacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 10249304 - 10249482
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||||| | |||||||||| |||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggt 10249403  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  10249404 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 13438521 - 13438343
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 13438422  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||| ||||    
T  13438421 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 32505570 - 32505748
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| ||||||||||| |||||| ||||| ||||| ||| ||||| | |||||||||| |||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggt 32505669  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  32505670 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 405 - 556
Target Start/End: Complemental strand, 30915614 - 30915463
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||| ||||||||    
T  30915614 atacacccttgtacaccccatgtattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttat 30915515  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||| |||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  30915514 gtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 20700997 - 20700815
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||||||  |||||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||||||||||||| | ||||| ||||    
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcg 20700898  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||||||||||||||||| |||||| ||| || |||||||||||||||| ||| ||||| | |||||||||||| ||||    
T  20700897 gggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 378 - 551
Target Start/End: Complemental strand, 28863633 - 28863460
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||  ||||||||| | |||||||||| |||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 28863534  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  28863533 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 396 - 556
Target Start/End: Complemental strand, 9058640 - 9058480
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||  |||||| |||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||| |||||||||||||    
T  9058640 tttattcccatacactcttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtca 9058541  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  9058540 gatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 17473198 - 17473020
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 17473099  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||||| |||||||||||| ||||    
T  17473098 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 40701656 - 40701478
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| ||||||| |||||||   ||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| | || ||||||| |||    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggt 40701557  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  40701556 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 378 - 551
Target Start/End: Original strand, 19930742 - 19930915
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| ||||||| ||||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||| ||||||||| | || ||||||| |||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 19930841  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    |||| ||||||||||||| |||||| ||||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  19930842 ccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 7465657 - 7465835
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||  ||||||||| | |||||||| | |||    
T  7465657 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgtggggt 7465756  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||  ||||||| |||||||||||| ||||    
T  7465757 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 405 - 556
Target Start/End: Complemental strand, 4060836 - 4060685
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||| | ||||| |||| | ||||||| ||||||||||| |||||| |    
T  4060836 atacacccttgtacaccccatgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgt 4060737  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||| ||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  4060736 gtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 40613819 - 40614002
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| |||||||  |||||||  ||||||||||||||| ||||| ||||| |||||  ||| | ||||| ||||||||| | |||||||||    
T  40613819 aggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatacattatgaagaaagaataggagagaaaagagaaagtgtgcttgtgc 40613918  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | |||||| ||| | |||||||| |||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||||||||    
T  40613919 ggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 36169018 - 36168836
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| || ||||  |||||||| |||||| |||||||| ||||| |||||||||||| ||| | ||||| ||||||||| ||||||||||||    
T  36169018 ggaaaatgttacataaacaccctttattctcatacactcttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtatgcttgtgcg 36168919  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||| | ||||||||||||||| |||||| || ||||| ||||||||||  ||||| | |||||||||||||||||    
T  36168918 gggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 378 - 561
Target Start/End: Original strand, 28381577 - 28381760
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||  ||||||||||| ||||||||||| ||||||||| | ||||||||||  ||    
T  28381577 aatgatacatagacaccctttattcccatacatccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggagt 28381676  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 561  Q
    ||| |||||||||||||| |||||| |||||||||| || ||||||||| ||| ||||||| |||||||||||| |||| ||||    
T  28381677 ccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactcataaa 28381760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 373 - 556
Target Start/End: Complemental strand, 42257376 - 42257193
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    |||||||| |||| |||||||  ||||||  ||||||| |||||||| ||||| |||||||||||  ||||| ||||| ||||||||| | |||||||||    
T  42257376 aggaaaatattacatagacaccctttatttctatacactcttgtacaccccatacattaggaagaaagaagaggagagaaaagagaaagtgtgcttgtgc 42257277  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | |||||| ||| | |||||||| |||||||||||||||||||| | ||||||| ||| ||| | | |||||||||||||||||    
T  42257276 ggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 371 - 556
Target Start/End: Complemental strand, 38732539 - 38732354
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| ||||||| ||||| |   ||||| ||||||||||| |||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  38732539 aaaggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 38732440  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| ||||||  |||| || ||||| |||||| |||||||||||| || ||||||||||| ||||||| | |||||||||||||||    
T  38732439 gcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 396 - 556
Target Start/End: Original strand, 38882751 - 38882913
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc---gaggtccacgtgactacgtg 492  Q
    |||||||  ||||||||||||||| ||||||||||||||||||  ||||| |||| ||||||||| |  ||||||||   | ||||||||||||||||||    
T  38882751 tttattcccatacacccttgtacaccccatgcattaggaagagataagataagagaaaagagaaagtgcgcttgtgcgggggggtccacgtgactacgtg 38882850  T
Q  493 tcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| |||||| ||||| ||||||||||| ||||| ||| ||||||| |||||||||||| ||||    
T  38882851 tcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 428 - 556
Target Start/End: Original strand, 26891476 - 26891604
Alignment:
Q  428 attaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgt 527  Q
    ||||||||||| |||||  |||||||||||||||| ||||||| ||||||||||||||| || ||||| |||||| |||||||||| | ||||||||||     
T  26891476 attaggaagagagaagagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgc 26891575  T
Q  528 cacttaagggtttctatgtatcataactc 556  Q
    ||| |||||||  ||||||||||||||||    
T  26891576 cacctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 373 - 556
Target Start/End: Complemental strand, 2533306 - 2533124
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||  || ||||  |||||||  ||||||||||||||| ||||| |||| ||||||| ||||| ||||  ||||| ||| | |||||||||    
T  2533306 aggaaaatgttatatatacaccctttattcccatacacccttgtacaccccatacattgggaagagagaagaggagataaaagaaaaagtgtgcttgtgc 2533207  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | |||| | ||| |||||||||| |||||| ||| ||||||||||| ||||||| ||||||||| | |||||||||||||||||    
T  2533206 ggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgccacttaaggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 43490303 - 43490121
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| || ||| ||||||||||| |||||  ||| |||||| ||| | | ||||||||    
T  43490303 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcg 43490204  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||  || | || ||||| |||||| |||||||||||| |||||||||||||| ||||||| | |||||||||||||||    
T  43490203 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 447 - 556
Target Start/End: Original strand, 5574479 - 5574588
Alignment:
Q  447 agaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgt 546  Q
    |||| ||||||||| | |||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || |||||||    
T  5574479 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgt 5574578  T
Q  547 atcataactc 556  Q
    ||||| ||||    
T  5574579 atcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 38273061 - 38273242
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    ||||||| |||| || ||||  |||||||| ||||| | ||||||| ||||| |||||||||||| ||| | ||||| ||||||||| | |||| |||||    
T  38273061 ggaaaatattacataaacaccatttattctcatacatc-ttgtacaccccatacattaggaagagagaataggagagaaaagagaaagtgtgctagtgcg 38273159  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||| |||||||||| |||||| ||||||||| ||||||||||||| ||  ||||  | |||||||||||||||||    
T  38273160 gggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 396 - 556
Target Start/End: Complemental strand, 27864851 - 27864704
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||| |||||||||||||||||||||| |||||||||||             ||||||||| | ||||| |||| ||||||||||| |||||||||    
T  27864851 tttattctcatacacccttgtacatcccatgtattaggaagag-------------aaagagaaagtgtgcttttgcggggtccacgtgattacgtgtca 27864765  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||||| ||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  27864764 gatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 413 - 556
Target Start/End: Original strand, 17819961 - 17820104
Alignment:
Q  413 ttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgt 512  Q
    ||||||| | |||||||||||||||| ||||| |||| |||||||||||| || ||||| | ||||||||| || || ||||| |||||| |||||||||    
T  17819961 ttgtacacctcatgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgt 17820060  T
Q  513 caaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| |||||||||| ||| ||  | | |||||||||||||||||    
T  17820061 caaggggtgtattgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 539
Target Start/End: Original strand, 2997402 - 2997570
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||| ||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  2997402 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 2997501  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtt 539  Q
    ||| ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||||    
T  2997502 gcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtt 2997570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 371 - 525
Target Start/End: Complemental strand, 41758772 - 41758616
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgc--tt 468  Q
    |||| |||||||||| ||||||||||||||||| ||||| ||||||||| |||||  ||||||||||| ||||| ||||  ||||||||||| |||  ||    
T  41758772 aaagaaaaatgttacatagacacattttattctcatacatccttgtacaccccatatattaggaagagagaagaggagataaaagagaaaatgtgcgttt 41758673  T
Q  469 gtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtatt 525  Q
     |||||| |  | ||| |||||||||| |||||||| | ||||||||| ||| ||||    
T  41758672 atgcgagatttatgtggctacgtgtcagatttttatataggtgtcaaaaggtatatt 41758616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 372 - 550
Target Start/End: Complemental strand, 3440163 - 3439985
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| |||||||  ||||||   ||||||| ||||||| || ||    ||| ||||| ||||| ||||||||||||||||| ||||||||    
T  3440163 aaggaaaatgttacatagacaccctttatttccatacacctttgtacaccctatattctagaaagagagaagaggagaggaaagagaaaatgtgcttgtg 3440064  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatca 550  Q
    || ||||||||| |  || ||| | |||||| |||||||||| | | |||||||| ||| ||||||| |||| ||||||    
T  3440063 cggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 430 - 556
Target Start/End: Complemental strand, 33436337 - 33436211
Alignment:
Q  430 taggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 529  Q
    ||||||||| ||||| || |||||||||||| | ||||||||| | |||||| ||   |||||||| |||||||||||||||||||| ||||||||| ||    
T  33436337 taggaagagagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgcca 33436238  T
Q  530 cttaagggtttctatgtatcataactc 556  Q
      ||||| | |||||||||||| ||||    
T  33436237 tctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 471
Target Start/End: Complemental strand, 44152108 - 44152012
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    ||||||||||| || |||| ||||||||  ||||||||||||| ||| |||||||||||||||| ||||| |||| |||||||||| | ||||||||    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgtatatctcatgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtg 44152012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 405 - 556
Target Start/End: Original strand, 45097684 - 45097835
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    |||||| ||||||||||| ||| ||||||||||| |||||  ||| |||||||||| | | |||||||| ||||||  || | || ||||| |||||| |    
T  45097684 atacactcttgtacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgt 45097783  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||||||| || ||||||| ||| ||||| | | |||||||||||||||    
T  45097784 atgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 556
Target Start/End: Complemental strand, 13365536 - 13365351
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| ||||||| ||||| |   || |||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||||    
T  13365536 aggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 13365437  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg--gtttctatgtatcataactc 556  Q
    | ||||||  ||   || ||||| |||||| |||||||||||| |||| ||||| ||  |||||  || | |||||||||||||||    
T  13365436 ggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatcataactc 13365351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 416 - 551
Target Start/End: Complemental strand, 41575278 - 41575142
Alignment:
Q  416 tacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc-gaggtccacgtgactacgtgtcaaatttttatgtgggtgtca 514  Q
    |||||| |||||||||||| ||| ||||| |||| |||||||||| | ||||||||  | ||||||| |||| || |||||||||||| ||||  |||||    
T  41575278 tacatctcatgcattaggacgagagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtca 41575179  T
Q  515 aagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    |||||||||||  ||  ||||| | ||||||||||||    
T  41575178 aagggtgtattaccatctaaggatgtctatgtatcat 41575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 374 - 513
Target Start/End: Complemental strand, 3738125 - 3737986
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||||||  | |||| | ||||||| ||||||| || ||    ||||||||  ||||| ||||||||| ||||||| ||||||||||    
T  3738125 ggaaaatgttacatagacaccctatattttcatacacctttgtacaccctatattctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcg 3738026  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtc 513  Q
     ||||||| |||| || ||||| |||||| ||||||||||    
T  3738025 gggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 373 - 470
Target Start/End: Complemental strand, 17823971 - 17823874
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||| ||||||   ||||||   ||||||||||||||| |||||  ||| ||||||| |||||||||| |||||||||| | |||||||    
T  17823971 aggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatttggaagagagaagatgagatgaaagagaaagtgtgcttgt 17823874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 374 - 502
Target Start/End: Original strand, 3034901 - 3035029
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||| |   ||||||| | ||||| | |||| ||||||||||| |||||  ||| |||||||||| ||| ||||||||    
T  3034901 ggaaaatgttacatagacaccttttaattgcatacaccttggtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 3035000  T
Q  474 aggtccacgtgactacgtgtcaaattttt 502  Q
     ||||||  |||| || ||||| ||||||    
T  3035001 gggtccatatgaccacatgtcagattttt 3035029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 8986180 - 8986122
Alignment:
Q  63 caaaccaattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaact 121  Q
    ||||||||||||||||||||| || |||||||||||| ||||| |||| | ||||||||    
T  8986180 caaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaact 8986122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 462
Target Start/End: Complemental strand, 2329431 - 2329352
Alignment:
Q  387 tagacacattttattcttatacacccttgtacatcccatgcat-ta---ggaagagggaagatgagaggaaagagaaaat 462  Q
    ||||||| |||||||||||| ||||||||||||||||||  || ||   ||||||| ||||| |||||||||||||||||    
T  2329431 tagacactttttattcttattcacccttgtacatcccatatatctatcgggaagagagaagaggagaggaaagagaaaat 2329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 139
Target Start/End: Original strand, 38584277 - 38584347
Alignment:
Q  69 aattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaactgaaccaaattaatctaaa 139  Q
    ||||||||||||||| || |||||||||||| ||||| |||| | |||||||| |||| ||| || |||||    
T  38584277 aattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaactaaaccgaataaaactaaa 38584347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 3e-53; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 9474798 - 9474976
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | || ||||||| |||    
T  9474798 aatgatacatagacactctttattctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 9474897  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  9474898 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 32813429 - 32813247
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||||||  |||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | ||||||||||    
T  32813429 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 32813330  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||||| |||||||| |||||| ||||||||| ||||||||||||| ||| ||||| | |||||||||||||||||    
T  32813329 gggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 396 - 556
Target Start/End: Complemental strand, 2582075 - 2581915
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||| ||||||||||||||| | |||| ||||||||||| ||||| ||||| ||| ||||| | |||||||||| |||||||||||||||||||||    
T  2582075 tttattctaatacacccttgtacacctcatgtattaggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 2581976  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  2581975 gatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 27564657 - 27564835
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 27564756  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||| ||||||||| |||||| ||||||||||||| ||||||||| ||| ||||| | |||||||||||| ||||    
T  27564757 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 41758983 - 41758805
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | || ||||||| |||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggt 41758884  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| |||||||||||||| |||||| ||||| ||||||||||||||||| || |||| ||| |||||||||||| ||||    
T  41758883 ccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 51898601 - 51898783
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| || ||||  ||||||  |||||||||||||||| |||||||| ||||||||| ||||| ||||||||| ||||| | ||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcg 51898700  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||| | | |||||||||||| ||||    
T  51898701 ggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 387 - 556
Target Start/End: Complemental strand, 50630627 - 50630458
Alignment:
Q  387 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 486  Q
    |||||||  |||||||| ||||||||||||||| || ||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||    
T  50630627 tagacaccatttattctcatacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgac 50630528  T
Q  487 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||| |||||| |||||||  |||||| ||||||| ||| ||||||| |||||||||||| ||||    
T  50630527 tacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 405 - 557
Target Start/End: Complemental strand, 3000470 - 3000318
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||| |||||| |    
T  3000470 atacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgt 3000371  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 557  Q
    |||||||||||||||||||||| ||| ||||||| | |||||||||| |||||    
T  3000370 gtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactcg 3000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 48716204 - 48716382
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| || || ||||| ||| | |||||||||| |||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggt 48716303  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  48716304 ccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 396 - 556
Target Start/End: Original strand, 38632261 - 38632421
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||| ||| | |||||||||| |||||||||||||||||||||    
T  38632261 tttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtca 38632360  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||||| ||| ||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  38632361 gatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 405 - 556
Target Start/End: Complemental strand, 38595305 - 38595154
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||| ||||||||| | ||||||| || ||||||||||||||||||||| |||||| |    
T  38595305 atacacccttgtacaccccatatattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgt 38595206  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||||||| ||| ||| ||| | |||||||||| ||||    
T  38595205 gtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 371 - 561
Target Start/End: Original strand, 45044475 - 45044665
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||||||||||   |||||||| ||||||||||||||| ||||| |||||||||||| |||||  |||| ||||||||||| || ||||    
T  45044475 aaaggaaaatgttacgtagacatcatttattctcatacacccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaaatgtgtttgt 45044574  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 561  Q
    ||| |||||| ||| |||| ||||| |||||| | ||||||||||| ||||||||| ||| |||||   | ||||||||||||||| ||||    
T  45044575 gcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactcttaaa 45044665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 47452242 - 47452420
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||| ||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 47452341  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||| ||||    
T  47452342 ccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 396 - 556
Target Start/End: Complemental strand, 43292 - 43132
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    ||||||||||||||| |||||||| |||||||||||| ||||| || || ||||| ||||||||| | ||||||||||  ||||||||||||||||||||    
T  43292 tttattcttatacactcttgtacaccccatgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtca 43193  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||||||||||||||| ||||||||| | ||||  | |||||||||||| ||||    
T  43192 gatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 372 - 556
Target Start/End: Original strand, 5958916 - 5959100
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| ||||||||||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | ||||||    
T  5958916 aaggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 5959015  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || ||||||  |||| || ||||| |||||| ||||||||||||  ||||||||| ||||||||||| | |||||||||||||||    
T  5959016 cggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 407 - 530
Target Start/End: Complemental strand, 13414910 - 13414787
Alignment:
Q  407 acacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgt 506  Q
    ||||||| |||||  ||||||||||||||||| |||||||| || ||||||||||| |||||||| | ||||||||||||||||||| | |||||| |||    
T  13414910 acaccctagtacactccatgcattaggaagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgt 13414811  T
Q  507 gggtgtcaaagggtgtattgtcac 530  Q
    ||||||||||||||||||||||||    
T  13414810 gggtgtcaaagggtgtattgtcac 13414787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 376 - 556
Target Start/End: Original strand, 49811447 - 49811627
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    |||||||||| |||||||  |||||||| |||||||||||| || | ||| |||||||||||| ||||| ||||| ||||||||| | ||||||||||      
T  49811447 aaaatgttacatagacaccctttattctcatacacccttgtgcaccacatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgga 49811546  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| |  || |||||||||| |||||| ||||| ||||||| ||||||||||||| ||||| | ||||| |||||||||||    
T  49811547 gtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 37649376 - 37649198
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| |||| |||| | ||||||||||   |    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcggaat 37649277  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||||| |||||||| |||||| |||||||||||||| |||||||| ||| ||| | | |||||||||||| ||||    
T  37649276 tcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 396 - 556
Target Start/End: Original strand, 8346327 - 8346488
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaa-gatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtc 494  Q
    |||||||| ||||||| |||||||  |||||||||||||||||  || || ||||| ||||||||| | |||||||||  ||||||||||||||||||||    
T  8346327 tttattctcatacacctttgtacactccatgcattaggaagagaaaaagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtc 8346426  T
Q  495 aaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | |||||| ||||||||||||| ||||||||| ||| ||| |||  ||||||||||| ||||    
T  8346427 agatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 374 - 555
Target Start/End: Complemental strand, 44454165 - 44453980
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtac----atcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttg 469  Q
    |||||||||||| || ||||  ||||||||||||||||||| |||    | |||||||||||||||||| ||||||||||||||||| ||| | ||||||    
T  44454165 ggaaaatgttacataaacaccatttattcttatacacccttatactctgaccccatgcattaggaagagagaagatgagaggaaagaaaaagtgtgcttg 44454066  T
Q  470 tgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataact 555  Q
    || | | ||||||| || || ||||| |||||| ||||||| ||||  | ||||||| ||||||| ||| ||||||||||||||||    
T  44454065 tgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcataact 44453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 423 - 551
Target Start/End: Original strand, 44548343 - 44548471
Alignment:
Q  423 catgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgt 522  Q
    |||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| ||||||| ||||| |||||    
T  44548343 catgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgt 44548442  T
Q  523 attgtcacttaagggtttctatgtatcat 551  Q
    |||| ||| ||| | | ||||||||||||    
T  44548443 attgccacctaaagatgtctatgtatcat 44548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 50590918 - 50591100
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||| || ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  50590918 ggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50591017  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  50591018 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 371 - 536
Target Start/End: Original strand, 11152293 - 11152458
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||  |||||||  |||||||| ||||| |||| |||| |||||||| | ||||||| ||||| ||||||||| |||||   |||||||    
T  11152293 aaaggaaaatgttatatagacaccatttattctcatacatccttctacaccccatgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgt 11152392  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg 536  Q
    ||| |||| || ||||||||||||| |||||| ||||| |||| |||||||||||| ||| |||||    
T  11152393 gcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg 11152458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 372 - 556
Target Start/End: Complemental strand, 47748626 - 47748443
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| ||||||| ||||| |   |||||| |||||||| |||||| ||||||||||| |||||  ||| |||||||||| ||| ||||||    
T  47748626 aaggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtg 47748527  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || | ||||  || | || ||||| |||||||| |||||||| |||||||||||| ||| ||||||| | |||||||||||||||    
T  47748526 cgggatccatatggccacatgtcagatttttatatgggtgtc-aagggtgtattgccacctaagggtatttatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 396 - 556
Target Start/End: Complemental strand, 7740893 - 7740733
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    ||||||||  |||| | ||||||||||||||||  |||||||| ||||| |||| |||| |||||||||  ||||| | ||||||| |  | ||||||||    
T  7740893 tttattctcgtacatctttgtacatcccatgcaacaggaagagagaagaggagatgaaaaagaaaatatatttgtgtggggtccacatagccacgtgtca 7740794  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||||||| |||||||| || ||||||||||| ||||| | || ||||||||||||||    
T  7740793 tatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactc 7740733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 378 - 551
Target Start/End: Complemental strand, 26274607 - 26274437
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  |||||||||||| |||| |||||||||||||||| |||||   ||| ||||| ||| | | |||||||  | |    
T  26274607 aatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattaggaagagagaaga---gagaaaagaaaaagtgtacttgtgcaggat 26274511  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    ||||||||||| |||||| |||||| ||||| ||||||| | ||||||| ||| ||||||| ||||||||||||    
T  26274510 ccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcat 26274437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 37926356 - 37926538
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    ||||||| |||  |||||||  |||||||  ||||| ||||||||| ||||| |||||||||||| |||||  |||| ||||||||| | | ||||| ||    
T  37926356 ggaaaatattatatagacaccatttattcacatacatccttgtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtacttgtacg 37926455  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | |||| ||| | |||||||| |||||||||||||||| ||| | ||||||| ||| ||| | | |||||||||||||||||    
T  37926456 ggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 376 - 556
Target Start/End: Original strand, 23597011 - 23597191
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    |||||||||| ||||||  ||||||||| ||||| ||||| ||| | |||| | |||||| || ||| | ||||| ||||| ||| | || |||||| ||    
T  23597011 aaaatgttacatagacattttttattctcatacatccttggacacctcatgaactaggaatagagaataggagagaaaagataaagtgtgtttgtgcaag 23597110  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| ||||| | |||||||| |||||||||||||| |||||| |||||||| ||| ||| | | |||||||||||| ||||    
T  23597111 gtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 6261052 - 6260870
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| || ||||  |||||| | ||||||| ||||||| || ||  | ||| ||||| ||||| |||| |||| ||||||| ||||| ||||    
T  6261052 ggaaaatgttacatacacaccatttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaagaaatagaaaatgtgcttatgcg 6260953  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||||||||| || ||| | ||||||||||||||||  | |||||||||  ||| ||||| | ||||| |||||||||||    
T  6260952 gggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactc 6260870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 41608411 - 41608593
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| || |||| ||||| |   ||||||||||||||| || ||| ||||||||||| |||||  ||| |||||||||| | | ||||| ||    
T  41608411 ggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacg 41608510  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||  || | || ||||| |||||| |||| ||||||| |||||||||| ||| ||||| | | |||||||||||||||    
T  41608511 gggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 562
Target Start/End: Original strand, 3302482 - 3302639
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| || ||  ||| ||||||| |||||||||| |||| ||||| | |||||||  | ||||||  ||| ||||||||| |||||| |    
T  3302482 atacacccttgtacaccctatatatttggaagagagaagatgagatgaaaaagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgt 3302581  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaat 562  Q
    ||||||||| | |  | ||||||||| ||||| | | |||||||||| |||| |||||    
T  3302582 gtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactcataaat 3302639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 556
Target Start/End: Complemental strand, 26440908 - 26440734
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| || |||   ||||||| ||||||||||||||||| |||| ||||| |||||| |||          |||||||| | ||||| ||    
T  26440908 aaggaaaatgttacataaacatcctttattcctatacacccttgtacattccatacattacgaagagagaa----------aagagaaagtgtgcttatg 26440819  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || | |||| ||| | |||||||| |||||| ||||||||| ||||||||||||||||  ||||| | ||||| |||| ||||||    
T  26440818 cgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatcctaactc 26440734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 374 - 515
Target Start/End: Original strand, 44332289 - 44332430
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||| || ||||| |   |||||||||||||||  | ||| ||||||||||| |||||  ||| |||||||||| ||| ||||||||    
T  44332289 ggaaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattaggaagagagaagagaagaagaaagagaaagtatacttgtgcg 44332388  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 515  Q
     ||||||   | | || ||||| |||||||||||||||||||    
T  44332389 gggtccatagggccacatgtcagatttttatgtgggtgtcaa 44332430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 99
Target Start/End: Original strand, 19825152 - 19825221
Alignment:
Q  29 aaattgtgagcacttaactcaccaactaaacaatcaaaccaattgtgagcactatcttaactcacccaaca 99  Q
    |||||||||||||||| ||||||||| |||||| ||||| ||||||||||| |||||| ||||||| ||||    
T  19825152 aaattgtgagcactta-ctcaccaaccaaacaaacaaacaaattgtgagcattatcttgactcaccaaaca 19825221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 2072461 - 2072504
Alignment:
Q  56 aaacaatcaaaccaattgtgagcactatcttaactcacccaaca 99  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||    
T  2072461 aaacaatcaaaccaatggtgagccctatcttgactcacccaaca 2072504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 105; Significance: 5e-52; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 372 - 556
Target Start/End: Original strand, 8779 - 8963
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||| |||||  ||||||||||| ||||||| ||||||||||||||| | ||||||    
T  8779 aaggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattaggaagagagaagatgggaggaaagagaaaatgtacttgtg 8878  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | |||||||||||||| ||||||||||||| ||| | |||||||  |||||||||||||||||| | ||||| |||||||||||    
T  8879 tggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcacttaaggatgtctatatatcataactc 8963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 9e-51; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 6034222 - 6034044
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 6034123  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||| ||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  6034122 ccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 48182971 - 48183149
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| ||||||||||| |||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 48183070  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  48183071 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 372 - 556
Target Start/End: Complemental strand, 31910376 - 31910192
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| |||||||  |||||||  |||||| |||||||||||||| |||||||||||| ||||||||||| ||||||||| | ||||||||    
T  31910376 aaggaaaatgttacatagacaccatttattcccatacactcttgtacatcccatacattaggaagagagaagatgagagaaaagagaaagtgtgcttgtg 31910277  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || |||||| ||| ||| |||||| |||||| |||||||||||||| |||||||||||| ||||| | |||||||||||||||||    
T  31910276 cggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 405 - 556
Target Start/End: Original strand, 480396 - 480547
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||||| ||||||||| | ||||||| || ||||||||||||||||||||| |||||| |    
T  480396 atacacctttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgt 480495  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  480496 gtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 378 - 557
Target Start/End: Complemental strand, 41236525 - 41236346
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 41236426  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcg 557  Q
    |||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||||| |||||    
T  41236425 ccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactcg 41236346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 50052345 - 50052528
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| |||||||  |||||||  ||||||| ||||||| |  ||||| ||||||||| ||||| ||||||||||||||| | |||||||||    
T  50052345 aggaaaatgttacatagacaccctttattcccatacacctttgtacaccttatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgc 50052444  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||| ||||    
T  50052445 ggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 24995029 - 24995207
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||| ||||||| ||||||||||| |||||| ||||| ||||| ||||||||||| |||||||||| |||    
T  24995029 aatgatacatagacaccctttattcccatacaccattgtacaccccatgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggt 24995128  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||| || || |||||| ||||    
T  24995129 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 371 - 556
Target Start/End: Complemental strand, 29240071 - 29239886
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| |||||||  |||||||  |||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||| | |||||||    
T  29240071 aaaggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgt 29239972  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | | ||||||||||||||||||| | |||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  29239971 gtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 405 - 556
Target Start/End: Original strand, 11511411 - 11511562
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| | ||||||||| |||||| |||||  |||| ||||||||| | |||||||||| ||||||||||||||||||||| ||||||||    
T  11511411 atacacccttgtacacctcatgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttat 11511510  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  11511511 gtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 405 - 556
Target Start/End: Original strand, 42044316 - 42044467
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| |    
T  42044316 atacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgt 42044415  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||  |||| ||||||| ||| ||||||| |||||||||||| ||||    
T  42044416 gtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactc 42044467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 396 - 556
Target Start/End: Original strand, 54473473 - 54473633
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||  |||||||||||||||  ||||| ||||||||||| ||||| ||||| ||||| ||| | |||||||||| ||||||||||||||||||| |    
T  54473473 tttattcccatacacccttgtacactccatgtattaggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtta 54473572  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||    
T  54473573 gatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 50526088 - 50526271
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| || ||||  ||||||  |||||||||||||||| |||||||| ||||||||| ||||| ||||||||| |||||   |||||||||    
T  50526088 aggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgc 50526187  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |   |||||||||| |||||||| |||||| ||||||||||||||||||||||| ||| ||| | | |||||||||||| ||||    
T  50526188 ggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 374 - 518
Target Start/End: Complemental strand, 41824064 - 41823920
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||||||  |||||||| ||||||| ||||||| | |||||||||||||||| ||||| ||||| ||||||||| | ||||||||||    
T  41824064 ggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcg 41823965  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagg 518  Q
     |||||| |||||||||||||| |||||| ||||||||| |||||    
T  41823964 gggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 416 - 556
Target Start/End: Original strand, 29234205 - 29234345
Alignment:
Q  416 tacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 515  Q
    |||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| ||  ||| ||||    
T  29234205 tacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaa 29234304  T
Q  516 agggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||||| ||  ||||||| |||||||||||| ||||    
T  29234305 agggtgtattgccatctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 376 - 556
Target Start/End: Complemental strand, 40574959 - 40574779
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    |||||||||  ||||||| ||||||||| ||||||||||||||| |||||  ||||||||||| ||||| ||||| ||||||||| | ||||||| || |    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgttcggg 40574860  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||| ||  |  ||||||| |||||| ||||||||||||||||||||||  ||| ||||| | |||||||||||||||||    
T  40574859 atccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 371 - 556
Target Start/End: Original strand, 19670631 - 19670816
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  19670631 aaaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 19670730  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| ||||||  || | || ||||| |||||| |||| ||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  19670731 gcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 375 - 556
Target Start/End: Original strand, 48647645 - 48647826
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 474  Q
    ||||||||||| ||||||   |||||| ||||||| | |||||||| | ||||| ||||||||| ||||| ||||||||||||||| | ||||||||||     
T  48647645 gaaaatgttacatagacatcatttatttttatacatctttgtacattctatgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgcgg 48647744  T
Q  475 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||||||| |||||| | |||||||||||||||| ||  |||||||||| || ||||| | | ||||| |||||||||    
T  48647745 agtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactc 48647826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 372 - 556
Target Start/End: Complemental strand, 3481828 - 3481654
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| |||||||  |||||||| |||||||||          ||||| ||| ||||| ||||||| ||||||||||||| | ||||||||    
T  3481828 aaggaaaatgttacatagacaccctttattctcatacaccct----------atgcactagaaagagagaagatgggaggaaagagaaagtgtgcttgtg 3481739  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | |||||||||||||| |||||| |||||| |||||||||||||| |||||||| ||| ||| ||| |||||||||||| ||||    
T  3481738 tggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 396 - 556
Target Start/End: Complemental strand, 23608395 - 23608235
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||  ||||| || |||||| | |||||||||||||||| ||||| ||||  ||||||||| | |||||||| |  || |||||||||||||||||    
T  23608395 tttattcccatacatccctgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtca 23608296  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||||||||||||| ||||||||||||  ||||||| ||||| |||||| ||||    
T  23608295 gatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 50813810 - 50813992
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||||| |||| ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  50813810 ggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 50813909  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||| ||  |||| || ||||| |||||| |||||||||||| |||||||||  ||| |||| || | |||||||||||||||    
T  50813910 gggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 55475373 - 55475191
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | ||| |||     
T  55475373 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgca 55475274  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||  || | || ||||| |||||| ||||||||||||||||||||||| ||| ||||| | | |||||||||||||||    
T  55475273 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 371 - 556
Target Start/End: Complemental strand, 47986392 - 47986208
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| ||||||| ||| |||   |||||||||||||||||||||| ||||||||||| |||||  | | |||||||||| | | |||||    
T  47986392 aaaggaaaatgttacatagacacctttaattgc-atacacccttgtacatcccatgtattaggaagagagaagagaataagaaagagaaagtgtacttgt 47986294  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| ||||||  || | || ||||| |||||| ||||| |||||| || ||||||| ||| ||||||| | |||||||||||||||    
T  47986293 gcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 539
Target Start/End: Original strand, 17983658 - 17983826
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||| ||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  17983658 aaagggaaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 17983757  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtt 539  Q
    ||| ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||||    
T  17983758 gcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtt 17983826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 373 - 563
Target Start/End: Original strand, 29547876 - 29548066
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||| ||| | | ||| |||    
T  29547876 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagaaaaagtgtacttatgc 29547975  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaatt 563  Q
    | | ||||  || | || ||||| |||||| |||||||||||| || ||||||| ||| ||||| | | ||||||||||||||| ||||||    
T  29547976 gggatccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactcttaaatt 29548066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 430 - 552
Target Start/End: Original strand, 53352540 - 53352661
Alignment:
Q  430 taggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 529  Q
    ||||||||| ||||| ||||| ||||||||| |||||||||||| ||||||| | ||||||||||| |||||| ||| ||||| ||||  ||||||| ||    
T  53352540 taggaagagagaagaggagagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-ca 53352638  T
Q  530 cttaagggtttctatgtatcata 552  Q
    | ||||||| |||||||||||||    
T  53352639 cctaagggtgtctatgtatcata 53352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 372 - 556
Target Start/End: Original strand, 28480184 - 28480368
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| |||||||  |||||    ||||| ||||||||| | |||||| ||||||||| ||||| |||| ||| |||||| | || |||||    
T  28480184 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28480283  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | ||||||| ||||||| ||||| |||||| |||| |||| ||   |||||||||||| ||||| | ||||||||| |||||||    
T  28480284 tggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 372 - 556
Target Start/End: Original strand, 28481059 - 28481243
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| |||||||  |||||    ||||| ||||||||| | |||||| ||||||||| ||||| |||| ||| |||||| | || |||||    
T  28481059 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28481158  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | ||||||| ||||||| ||||| |||||| |||| |||| ||   |||||||||||| ||||| | ||||||||| |||||||    
T  28481159 tggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28481243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 372 - 556
Target Start/End: Original strand, 28481934 - 28482118
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| |||||||  |||||    ||||| ||||||||| | |||||| ||||||||| ||||| |||| ||| |||||| | || |||||    
T  28481934 aaggaaaatgttacatagacaccctttataagaatacatccttgtacaactcatgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtg 28482033  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | ||||||| ||||||| ||||| |||||| |||| |||| ||   |||||||||||| ||||| | ||||||||| |||||||    
T  28482034 tggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactc 28482118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 376 - 556
Target Start/End: Complemental strand, 29978065 - 29977885
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    |||||||||| |||| |  |||||||| ||||||| |||||||| ||||| ||||||  ||||  ||||  ||| |||||||||| | |||||||| | |    
T  29978065 aaaatgttacatagatatcttttattcctatacacacttgtacaccccatacattagtgagagaaaagagaagatgaaagagaaagtgtgcttgtgtggg 29977966  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||  ||||||||||||| |||||| ||||||||| || |||||||||| ||| || || | | |||||||||| ||||    
T  29977965 gtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactc 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 377 - 529
Target Start/End: Complemental strand, 47104723 - 47104571
Alignment:
Q  377 aaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgagg 476  Q
    ||||||||||||||||| |||||||||  ||||  || ||||| | ||||||||| |||||| ||||| |||| |||||||||| | || ||||| | ||    
T  47104723 aaatgttacgtagacactttttattctcgtacattctagtacacctcatgcattaagaagagagaagaggagatgaaagagaaagtgtgtttgtgtgggg 47104624  T
Q  477 tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 529  Q
    || |    || ||||||||||||||| ||||||||||| || |||||||||||    
T  47104623 tcaataaaaccacgtgtcaaatttttgtgtgggtgtcagagagtgtattgtca 47104571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 422 - 557
Target Start/End: Original strand, 8343129 - 8343264
Alignment:
Q  422 ccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtg 521  Q
    ||||| ||||||||||| |||||  ||| |||||||||| ||| ||| |||| ||||||  || | || ||||| |||||||||| ||||||||||| ||    
T  8343129 ccatgtattaggaagagagaagagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatg 8343228  T
Q  522 tattgtcacttaagggtttctatgtatcataactcg 557  Q
    ||||| ||| ||||| | | ||||||||||||||||    
T  8343229 tattgccacctaaggatgtttatgtatcataactcg 8343264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 373 - 556
Target Start/End: Complemental strand, 32767141 - 32766958
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| ||||||||||||| |   |||||||||||||||  | ||| ||||| ||||| || ||  ||| |||||||||| | | |||||||    
T  32767141 aggaaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattagaaagagagaggagaagaagaaagagaaagtgtacttgtgc 32767042  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
      ||||||  || | || ||||| |||||| | |||||||||| |||||||||| ||| |||| || | |||||||||||||||    
T  32767041 agggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactc 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 556
Target Start/End: Original strand, 18924407 - 18924595
Alignment:
Q  368 atcaaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgct 467  Q
    |||||||||||||||||| ||||||| ||||| |   |||||||||| |||| | |||| ||||||||||| |||||  ||| |||||||||| | | ||    
T  18924407 atcaaaggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtact 18924506  T
Q  468 tgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||  || ||  |  | || ||||| |||||| ||||| | |||| |||||||||| ||| ||||||| | |||| ||||||||||    
T  18924507 tgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 371 - 526
Target Start/End: Original strand, 29589655 - 29589810
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    |||||||||| |||| ||||||| ||||| |   |||||| |||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  29589655 aaaggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 29589754  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattg 526  Q
    | | ||||||  || | || | ||| |||||| |||||||||||| ||||||||||    
T  29589755 gtggggtccatatggccacatatcagatttttgtgtgggtgtcaaggggtgtattg 29589810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 44536663 - 44536845
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| ||||||||||||| |   |||||  |||||||| || ||| ||||||||||| |||||  ||| |||||||||| | | ||| ||     
T  44536663 aggaaaatgttacatagacacattttaattgcatacattcttgtacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgt 44536762  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | |||| |  |||| || ||||| |||||| ||||| |||| |||||||||||| ||| |||  || | |||||||||||||||    
T  44536763 ggggtctatatgaccacatgtcagatttttgtgtggatgtc-aagggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 377 - 460
Target Start/End: Original strand, 56300086 - 56300169
Alignment:
Q  377 aaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaa 460  Q
    ||||||||||||||||   |||||||| |||||  |||||||||| ||| |||||| ||||| ||||| |||||||||||||||    
T  56300086 aaatgttacgtagacattctttattctcatacaatcttgtacatctcatacattagaaagagagaagaggagaggaaagagaaa 56300169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 16870618 - 16870560
Alignment:
Q  63 caaaccaattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaact 121  Q
    ||||||||||||||||||||| || |||||||||||| ||||| |||| | ||||||||    
T  16870618 caaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaact 16870560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 556
Target Start/End: Original strand, 55079679 - 55079814
Alignment:
Q  422 ccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgagg-tccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggt 520  Q
    ||||| ||||||||||| |||||  ||| |||||||||| | | |||||| | || ||||  || | || ||||| |||||| | ||||||||||  |||    
T  55079679 ccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggt 55079778  T
Q  521 gtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||| ||||||| | |||||||||||||||    
T  55079779 gtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 54147626 - 54147572
Alignment:
Q  56 aaacaatcaaaccaattgtgagcactatcttaactcacccaacatccaaataaat 110  Q
    |||||| ||||||||||||||| |||||||| ||||||| |||| ||||| ||||    
T  54147626 aaacaaacaaaccaattgtgaggactatcttgactcacctaacaaccaaacaaat 54147572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 5e-49; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 373 - 556
Target Start/End: Complemental strand, 21234584 - 21234401
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| ||||||| ||||||||| ||||||| ||||||| ||||| |||||||||||| | | | |||||| |||||||||| |||||||||    
T  21234584 aggaaaatgttacatagacaccttttattctcatacaccattgtacaccccatacattaggaagagaggaaaggagaggtaagagaaaatgtgcttgtgc 21234485  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | ||| || ||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||| | |||||||||||||||||    
T  21234484 ggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 405 - 556
Target Start/End: Complemental strand, 38267191 - 38267040
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||| | |||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| |    
T  38267191 atacaccttcgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgt 38267092  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||| ||||    
T  38267091 gtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 8080305 - 8080483
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||| ||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 8080404  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||| |||||||||||| ||||    
T  8080405 ccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 46033719 - 46033901
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||||||  |||||||| ||||||||||||||| ||||| ||||||||| || ||||| ||||| ||||||||||||||||||||||    
T  46033719 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaatagagaagaggagagaaaagagaaaatatgcttgtgcg 46033818  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
      || || ||||| |||||||| |||||||||||||||| ||||||||||||| ||| ||||  | |||||||||||||||||    
T  46033819 gagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 400 - 556
Target Start/End: Complemental strand, 35137689 - 35137533
Alignment:
Q  400 ttcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatt 499  Q
    |||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | || ||||||| ||||||||||||||||||| | |||    
T  35137689 ttctcatacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatt 35137590  T
Q  500 tttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| ||||||||||||||||||||||| ||| ||||||| ||||| |||||| ||||    
T  35137589 tttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 405 - 556
Target Start/End: Complemental strand, 38837368 - 38837217
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||| |||||| |    
T  38837368 atacacccttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgt 38837269  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || |||||  |||||||||||| ||| ||||||| |||||||||||| ||||    
T  38837268 gtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Original strand, 4999436 - 4999614
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| ||||||| ||||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||  ||||||||| | || ||||||| |||    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggt 4999535  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||| ||| |||||| ||||||||||||| ||||||||| ||  ||||||| |||||||||||| ||||    
T  4999536 ccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 19330020 - 19329842
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 19329921  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||| ||||||||| |||||| ||||||||||||| ||||||||| ||| ||||| | |||||||||||| ||||    
T  19329920 ccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 387 - 556
Target Start/End: Original strand, 19436118 - 19436287
Alignment:
Q  387 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 486  Q
    |||||||  |||||||| ||||||||||||||| ||||||||||||||||||  ||||  |||| ||||||||| | ||||| |||| | ||||||||||    
T  19436118 tagacaccatttattctcatacacccttgtacaccccatgcattaggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtgac 19436217  T
Q  487 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||| ||||| | |||||||||||| ||||    
T  19436218 tacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 405 - 556
Target Start/End: Complemental strand, 40957858 - 40957707
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| | ||||||| || | ||||||||||||||||||| |||||| |    
T  40957858 atacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgt 40957759  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| |||||| |||||||| ||| |||| || |||||||||||| ||||    
T  40957758 gtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 396 - 570
Target Start/End: Complemental strand, 7389548 - 7389375
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||  ||||||||| ||||| |||||| ||||||||||| ||  | ||||| ||||||||| | |||||||||| |||||||||||||||||||||    
T  7389548 tttattcccatacaccct-gtacaccccatgtattaggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 7389450  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaattaataaca 570  Q
     |||||| |||||||||||||| |||||||| ||| ||||||| |||||||||||| |||| |||| ||||||||    
T  7389449 gatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactcttaaaataataaca 7389375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 371 - 555
Target Start/End: Complemental strand, 35523061 - 35522877
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| || ||||  |||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | |||||||    
T  35523061 aaaggaaaatgttacataaacaccatttattcccatacacccttgtacaccccatacattaggaagagagaagaagagagaaaagagaaagtgtgcttgt 35522962  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataact 555  Q
    ||| | ||||  || | |||||||| |||||| ||||||||| ||| ||||||||| ||||||||| | ||||||||||||||||    
T  35522961 gcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcataact 35522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 412 - 551
Target Start/End: Complemental strand, 3784139 - 3784000
Alignment:
Q  412 cttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtg 511  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | ||||||||||||||||||| |||||| ||||||||    
T  3784139 cttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtg 3784040  T
Q  512 tcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    ||||| | ||||||| ||| ||||||| ||||||||||||    
T  3784039 tcaaaagatgtattgccacctaagggtgtctatgtatcat 3784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 397 - 551
Target Start/End: Original strand, 32951434 - 32951588
Alignment:
Q  397 ttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaa 496  Q
    ||||||| ||||||||||||||| |||||| ||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||||||||| |     
T  32951434 ttattctcatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttag 32951533  T
Q  497 atttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    |||||| ||||| ||| ||||| ||||||||||  |||| || ||||||||||||    
T  32951534 atttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 371 - 556
Target Start/End: Complemental strand, 8238398 - 8238212
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| ||||| | ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | |||||    
T  8238398 aaaggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgt 8238299  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcactta-agggtttctatgtatcataactc 556  Q
    ||| ||||||  ||||||| ||||| |||||| ||||||||||||||||||||||| ||| || ||||| | |||||||||||||||    
T  8238298 gcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactc 8238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 405 - 551
Target Start/End: Complemental strand, 3694518 - 3694372
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    |||||| |||||||| |||||||||| ||||||| ||||| ||||| ||||||||| | |||||||||| | ||||| ||||||||||||| |||||| |    
T  3694518 atacactcttgtacaccccatgcattgggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgt 3694419  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    |||||||| ||| ||||||||||||| ||||||| | ||| ||||||    
T  3694418 gtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcat 3694372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 26296826 - 26296644
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    ||||||||||||||||||||  | ||||   ||||||||||||||| | ||| ||||| |||||| ||||| ||||| |||||||||||  |||||||||    
T  26296826 ggaaaatgttacgtagacaccatatatttccatacacccttgtacacctcatacattaagaagagagaagaggagagaaaagagaaaatgcgcttgtgcg 26296727  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||  || | |||| ||| |||||||||||| ||| ||||||| ||||||||| ||||| | |||||||||||||||||    
T  26296726 gggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 38044379 - 38044197
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| |||||||||||  ||||  ||| |||||||||| | | ||||||||    
T  38044379 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagaaaagagaagaagaaagagaaagtgtacttgtgcg 38044280  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||  || |||| ||||| |||||| ||||| |||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  38044279 gggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 11044356 - 11044188
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||| | ||||||| ||||||| | |||||||||||||||| ||||||||||||||||||||| | | |||||||| |||    
T  11044356 aatgatacatagacactctttattttcatacacctttgtacacctcatgcattaggaagagagaagatgagaggaaagagaaagtgtacttgtgcggggt 11044257  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||||||||||||           |||||||||||| ||||||| ||| ||||||| |||||||||||| ||||    
T  11044256 ccacgtgactacgtgtca----------ggggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactc 11044188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 22343543 - 22343361
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  22343543 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 22343444  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||  ||   || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  22343443 gggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 41423864 - 41423682
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| || ||||  |||||||| ||||||| ||||||| |||||||| ||||||||| ||||| |||| |||||||||||||||||||| ||    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacg 41423765  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     | || ||||||| || ||||| |||||| |||  |||||||  ||||||||  ||  ||| | | |||||||||||||||||    
T  41423764 ggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 556
Target Start/End: Complemental strand, 36208306 - 36208173
Alignment:
Q  423 catgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgt 522  Q
    |||||| ||||||||| ||||| ||||||||||||||||| |||||||||  |||||||||||| || |||||  ||||| |||||||||||| |  |||    
T  36208306 catgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgt 36208207  T
Q  523 attgtcacttaagggtttctatgtatcataactc 556  Q
    |||  ||| ||||||| |||||||||||||||||    
T  36208206 attaccacctaagggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 447 - 556
Target Start/End: Original strand, 36361904 - 36362013
Alignment:
Q  447 agaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgt 546  Q
    |||| ||||||||| | |||||||| | ||||||||||||||||||||| |||||| ||||||||||||||| ||||||| ||| ||||||| |||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgt 36362003  T
Q  547 atcataactc 556  Q
    ||||| ||||    
T  36362004 atcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 36362192 - 36362026
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| |||||||||||||||||||||| |||||||||||             ||||||||| | |||||||| | |||    
T  36362192 aatgatacatagacaccctttattctcatacacccttgtacatcccatgtattaggaagaga------------aaagagaaagtgtgcttgtgtggggt 36362105  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||  ||| ||||||| |||||||||||| ||||    
T  36362104 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 375 - 527
Target Start/End: Original strand, 16374743 - 16374895
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 474  Q
    ||||||||||| |||||||  |||||||| ||||||| |||||||  |||| |||||||||||| ||| | |||| |||||||||  | |||||||| ||    
T  16374743 gaaaatgttacatagacaccctttattctcatacacctttgtacactccatacattaggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtga 16374842  T
Q  475 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgt 527  Q
    | |||||||||| |||||||| |||||| ||||| |||||| || ||||||||    
T  16374843 gatccacgtgaccacgtgtcagatttttgtgtggatgtcaagggatgtattgt 16374895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 376 - 556
Target Start/End: Complemental strand, 41915921 - 41915741
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    |||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||||| |    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggg 41915822  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||  || | || ||||| |||||| ||| |||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  41915821 gtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 3434730 - 3434562
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| |||          |||||||| | |||||||||| | |    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattaggaagagagaa----------aagagaaagtgtgcttgtgcgggat 3434641  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||| ||||    
T  3434640 ccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 373 - 556
Target Start/End: Complemental strand, 31736060 - 31735884
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||  |||| || ||||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | |||||||||    
T  31736060 aggaaaatgttagatagataccttttattcccatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgc 31735961  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | | |||| ||| | |||||       ||| ||||||||| |||| |||||||| ||| ||||| | |||||||||||||||||    
T  31735960 gggatccatgtggccacgtg-------tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 372 - 522
Target Start/End: Original strand, 27744225 - 27744375
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||  || ||||  |||||||  ||| | |||||||||||||||||| ||||||||| ||||| ||||||| ||||||||| ||||| ||    
T  27744225 aaggaaaatgttatataaacaccatttattcccatatatccttgtacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtgcttatg 27744324  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgt 522  Q
     | | |||||||| | || ||||| |||||| ||||||| |||||||||||    
T  27744325 agggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggtgt 27744375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 35468773 - 35468955
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| || |||| ||||||||| ||||| |||| |||||| |||| | ||||||||| ||||| || |||||||||||| | || ||||||     
T  35468773 ggaaaatgttacatatacaccttttattctcatacatccttatacatctcatgaactaggaagagagaagaggataggaaagagaaagtgtgtttgtgca 35468872  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||| ||   || | | | |||||||||||||||||||| | ||||||| ||  ||||| | |||||||||||| ||||    
T  35468873 gggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 371 - 556
Target Start/End: Original strand, 32564341 - 32564526
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||| ||||||| |||||| |||||| |   ||||||||||||||| | |||| ||||||||||| |||||  ||| |||||||||| | |  ||||    
T  32564341 aaaggaagatgttacatagacatattttaattgcatacacccttgtacacctcatgtattaggaagagagaagagaagaagaaagagaaagtgtatttgt 32564440  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| ||||||  |  | || ||||| |||||| |||||||||||| |||||||||| ||| ||||  | | |||||||||||||||    
T  32564441 gcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 371 - 556
Target Start/End: Original strand, 40846028 - 40846213
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| |||| || ||||| |   ||||||||||||||||| |||   |||||||||| |||||  ||| |||||||||| | |  ||||    
T  40846028 aaaggaaaatgttacatagataccttttaattgcatacacccttgtacatctcatcttttaggaagagagaagagaagaagaaagagaaagtgtatttgt 40846127  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| ||||||  | ||||| ||| | |||||| ||||| |||||| |||||||||| ||| ||||| | | |||||||||||||||    
T  40846128 gcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 376 - 556
Target Start/End: Complemental strand, 7728086 - 7727906
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    |||||||||| ||||||| ||||| |   ||||| ||||||||| |||||  ||||||||||| |||||  ||| |||| ||||| | | |||||||| |    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaacagaaagtgtacttgtgcggg 7727987  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||  |||| || ||||| |||||||||||  ||||||  ||||||||  ||| ||||||| | |||||||||||||||    
T  7727986 gtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactc 7727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 396 - 556
Target Start/End: Complemental strand, 18207339 - 18207180
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||| | |||||||||||||||  | || || ||||||||| ||||| |||| |||||||||| | |||||||| | ||| |||||| | |||||| |    
T  18207339 tttattatcatacacccttgtacactctatccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtgcc-acgtgtta 18207241  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| | ||||||||||  ||||||||| ||| ||||| | |||||||||||||||||    
T  18207240 gatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 376 - 556
Target Start/End: Original strand, 39255844 - 39256023
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    |||||||||| |||||||  |||||| | |||||||||||||||| | || ||   ||||||| ||||| |||| |||||||||| | | |||||| |      
T  39255844 aaaatgttacatagacaccctttattatcatacacccttgtacattctatccaccgggaagagagaagaggagatgaaagagaaagtgttcttgtgtgga 39255943  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||| | |||||||| |||||| | ||||| ||||  ||||||||| ||| ||||| | |||||||||||||||||    
T  39255944 gtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 375 - 515
Target Start/End: Original strand, 2318160 - 2318302
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattag-ga-agagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||| |||||||| ||||||   ||||||| |||||||  ||||||||||| || |||| |||||||||| |||||||||| ||||||| ||     
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacactccatgcattagagagagagagaagatgagatgaaagagaaagtatgcttatgt 2318259  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa 515  Q
      |||||||||||| ||  |||| |||||| ||||||||||||    
T  2318260 cgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaa 2318302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 464 - 558
Target Start/End: Original strand, 46374810 - 46374904
Alignment:
Q  464 tgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgt 558  Q
    |||||||||| |||||| ||| | |||||||| |||||| ||||||||| ||||||||| ||| ||| ||||| | |||||||||||||||||||    
T  46374810 tgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactcgt 46374904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 373 - 438
Target Start/End: Original strand, 46374741 - 46374806
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagag 438  Q
    ||||||||||||| |||||||  |||||||  ||||||||||||||| ||||| ||||||||||||    
T  46374741 aggaaaatgttacatagacaccatttattcccatacacccttgtacaccccatacattaggaagag 46374806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 46963923 - 46963981
Alignment:
Q  63 caaaccaattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaact 121  Q
    ||||||||||||||||||||| || |||||||||||| ||||| |||| | ||||||||    
T  46963923 caaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaact 46963981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 378 - 438
Target Start/End: Original strand, 36361847 - 36361907
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagag 438  Q
    |||| ||| |||||||  |||||||| |||||||||||||||| ||||| |||||||||||    
T  36361847 aatgatacatagacaccctttattctcatacacccttgtacattccatgtattaggaagag 36361907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 44338256 - 44338199
Alignment:
Q  63 caaaccaattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaac 120  Q
    ||||| ||||||||||||||| || |||||||||||| ||||| |||| | |||||||    
T  44338256 caaactaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 44338199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 5e-49; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 378 - 561
Target Start/End: Original strand, 33149560 - 33149743
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  ||||||||  |||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  33149560 aatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 33149659  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 561  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||| |||| ||||    
T  33149660 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactcataaa 33149743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 2740452 - 2740274
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||| | |||||||||| | |    
T  2740452 aatgatacatagacaccctttattcccatacacccttgtacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgcgggat 2740353  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||| ||||    
T  2740352 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 378 - 551
Target Start/End: Original strand, 18520806 - 18520979
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||| | ||||||||||||||| | |||||||||||||||| ||||| ||||  ||||||||| | |||||||||| |||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggt 18520905  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  18520906 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 376 - 556
Target Start/End: Original strand, 35943812 - 35943992
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    |||||||||| |||||||||||||||   ||||||||||||||| |||||||| |||||||||  |||| ||||||||||||||| | |||||||| | |    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtggg 35943911  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||| ||||||||||| |||||| ||||||||||||| | ||||||| ||| ||||||| |||||||||||||||||    
T  35943912 atccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 35785377 - 35785199
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| ||||||| |||||||   ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| | || ||||||| | |    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcgggat 35785278  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||||||||||| |||||| ||||||||||||| ||||||||| ||| ||||||| |||||||||||| ||||    
T  35785277 ccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 387 - 556
Target Start/End: Original strand, 36732873 - 36733042
Alignment:
Q  387 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 486  Q
    |||||||  |||||||  ||||||||||||||| | |||||||||||||||| ||||| ||||| ||||||||| | |||||||||| ||||||||||||    
T  36732873 tagacaccctttattcccatacacccttgtacacctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgac 36732972  T
Q  487 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || |||||| |||||| |||||||||||||||||||||||  || ||||||| |||||||||||| ||||    
T  36732973 tatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 387 - 549
Target Start/End: Complemental strand, 13811821 - 13811659
Alignment:
Q  387 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 486  Q
    |||||||  |||||||  ||||| |||||||||||||||||||||||||||| ||||| |||||  |||||||| | |||||||||| ||||||||||||    
T  13811821 tagacaccatttattcccatacatccttgtacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgac 13811722  T
Q  487 tacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatc 549  Q
    ||||||||| |||||| ||||||||||||| | ||||||| ||| ||||||| ||||||||||    
T  13811721 tacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 14831992 - 14831814
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||  ||| ||||| | |||||||||| | |    
T  14831992 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggat 14831893  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| || |||||||||||| ||||    
T  14831892 ccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 15409528 - 15409710
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| || ||||  |||||||  ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||| | | ||||||||||    
T  15409528 ggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagagagtgtgcttgtgcg 15409627  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| ||| |||||||||| |||||| ||||||||||||||  ||||||||||| ||||| | |||||||||||||||||    
T  15409628 gggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 40145585 - 40145407
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| ||| ||||||||||| | | |||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  40145585 aatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 40145486  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||| ||| ||||||||||||| ||| ||||||| |||||||||||| ||||    
T  40145485 ccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 373 - 556
Target Start/End: Complemental strand, 31009171 - 31008988
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| |||||||  |||||||| ||||||| ||||||| |||||||| ||||||||| |||||  |||||||| ||||| | |||||||||    
T  31009171 aggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgc 31009072  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | | ||||||||||||||||||| |||||| |||||||||  |||  ||||||||||| ||||| | | |||||||||||||||    
T  31009071 gggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 375 - 556
Target Start/End: Complemental strand, 6679879 - 6679698
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 474  Q
    ||||||||||| ||||||   |||||| | ||||||||||||||| || || |||||||||||| ||||| ||||| ||||||||||| || |||||||     
T  6679879 gaaaatgttacatagacatcatttattgtcatacacccttgtacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcgg 6679780  T
Q  475 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||||| |||||||| |||||| ||||||||||||| ||||||||| ||| ||| | | |||||||||||||||||    
T  6679779 ggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 761 - 866
Target Start/End: Original strand, 42779650 - 42779755
Alignment:
Q  761 tcaaaatcaacataactagatgccaggaataagtacttcgtggccacacaaaaacaaaagacacaagacactcacatctcctcggacaacgcaagccaaa 860  Q
    ||||||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  42779650 tcaaaatcaacgtaactagatgctaggaacaagtacttcgtagccacacaaaaacaaaagacacaagacactcacatctcctcagacaacacaagccaaa 42779749  T
Q  861 acgtac 866  Q
    | ||||    
T  42779750 atgtac 42779755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 421 - 556
Target Start/End: Complemental strand, 28177910 - 28177775
Alignment:
Q  421 cccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggt 520  Q
    ||||| |||||||||||||||||| ||||| ||||||||| | || ||||||| |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  28177910 cccatacattaggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggt 28177811  T
Q  521 gtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||| ||||| | |||||||||||||||||    
T  28177810 gtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 372 - 556
Target Start/End: Complemental strand, 26720700 - 26720516
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||  ||||||   |||||||| ||||||||| ||||| ||||| |||||||||||| |||||  |||| ||||||||| | ||||||||    
T  26720700 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26720601  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || | |||| ||| | |||||||| |||||| ||| ||||| ||||||||||||| ||| ||||| | |||||||||||||||||    
T  26720600 cgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 372 - 556
Target Start/End: Complemental strand, 26990449 - 26990265
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||  ||||||   |||||||| ||||||||| ||||| ||||| |||||||||||| |||||  |||| ||||||||| | ||||||||    
T  26990449 aaggaaaatgttatatagacatcatttattctcatacaccctagtacaccccatacattaggaagagagaagagaagagaaaagagaaagtgtgcttgtg 26990350  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || | |||| ||| | |||||||| |||||| ||| ||||| ||||||||||||| ||| ||||| | |||||||||||||||||    
T  26990349 cgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 372 - 484
Target Start/End: Complemental strand, 2177548 - 2177436
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||| ||||||||    
T  2177548 aaggaaaatgttacagagacacattttattctcatacacccttgtacatccaatgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtg 2177449  T
Q  472 cgaggtccacgtg 484  Q
     | | ||||||||    
T  2177448 tgggatccacgtg 2177436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 372 - 556
Target Start/End: Original strand, 3921181 - 3921365
Alignment:
Q  372 aaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtg 471  Q
    |||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | ||||||    
T  3921181 aaggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtg 3921280  T
Q  472 cgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    || ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  3921281 cggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 2252085 - 2252268
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||||    
T  2252085 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 2252184  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||| | | |||||||||||||||    
T  2252185 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 371 - 556
Target Start/End: Original strand, 6259916 - 6260101
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| |||| |   ||||||| ||||||| |||||||||||||| ||||||  |||| ||||| |||| |||||||||| | ||||| |    
T  6259916 aaaggaaaatgttacatagatatcctttattcctatacacacttgtacatcccatacattagtgagagagaagaggagatgaaagagaaagtgtgcttct 6260015  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | |||||||| ||||| | |||| | ||||||  |||||||| ||||||||||||||||| || || | | |||||||||| ||||    
T  6260016 gtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 373 - 529
Target Start/End: Original strand, 20073433 - 20073589
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||  ||||||  ||||||||| ||||||| ||||| ||| |||| | ||||||||| ||||| ||||||||| ||||| | |||||||||    
T  20073433 aggaaaatgttagatagacattttttattctcatacacctttgtaaatctcatgaactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgc 20073532  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtca 529  Q
      ||||||||||   |||||  | ||||||||||| |||||||||||||||||||||    
T  20073533 agggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtca 20073589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 429 - 556
Target Start/End: Original strand, 42414275 - 42414402
Alignment:
Q  429 ttaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtc 528  Q
    |||||||||| ||||| || || ||||| ||| | |||||||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||||| |    
T  42414275 ttaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgcc 42414374  T
Q  529 acttaagggtttctatgtatcataactc 556  Q
    || ||  ||| |||||||||||| ||||    
T  42414375 acctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 373 - 561
Target Start/End: Original strand, 39688814 - 39689002
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| ||||||| ||||| |   ||||||| ||||||| || ||| ||||||||||| |||||  ||| |||||||||| | | ||| |||    
T  39688814 aggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattaggaagagagaagaaaagaagaaagagaaagtgtacttatgc 39688913  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactcgtaaa 561  Q
    | ||| ||  |||| || | ||| |||||| |||||||||||| || ||||||| ||||||||||| | ||||||||||||||| ||||    
T  39688914 ggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactcttaaa 39689002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 408 - 551
Target Start/End: Original strand, 36875564 - 36875698
Alignment:
Q  408 cacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtg 507  Q
    |||||||||||| |||||| ||||||||||| ||||| ||||  ||||||||| | |||||||||| | |||||||||||         |||||| ||||    
T  36875564 cacccttgtacaccccatgtattaggaagagagaagaggagaaaaaagagaaagtgtgcttgtgcgggatccacgtgact---------atttttgtgtg 36875654  T
Q  508 ggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    ||||||||||||||||||| ||| ||||||| ||||||||||||    
T  36875655 ggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 375 - 556
Target Start/End: Original strand, 33825243 - 33825424
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 474  Q
    ||||||||||| | |||||  |||||||| ||||| |||| |||| |||||||| ||||||||| |||||  |||  ||||||||| | ||||||||  |    
T  33825243 gaaaatgttacattgacaccatttattctcatacagccttctacaccccatgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtgtaa 33825342  T
Q  475 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| ||| |||  |||||||| ||||||||||||||||||| | |||||||| ||| ||||  | |||||| ||||| ||||    
T  33825343 ggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 374 - 512
Target Start/End: Complemental strand, 21370186 - 21370048
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| || ||||  |||||| | ||||||| |||||||||  ||  | ||||||||  ||||||||||||||||||||||| || |||||||    
T  21370186 ggaaaatgttacataaacaccctttattttcatacacctttgtacatcttatatactaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcg 21370087  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgt 512  Q
     |||||||||||| || ||||| ||||||  ||||||||    
T  21370086 gggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 376 - 556
Target Start/End: Complemental strand, 9603993 - 9603813
Alignment:
Q  376 aaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgag 475  Q
    ||||||||||||||||||  |||||||| ||||||| |||||||||||| ||| || |||||| ||||| || | |||||||||| | || ||||  | |    
T  9603993 aaaatgttacgtagacaccatttattctcatacacctttgtacatcccaagcactaagaagagagaagacgaaatgaaagagaaagtgtgattgtatggg 9603894  T
Q  476 gtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||  |||| | |||||| |||||| ||| ||||| || | ||||||| |||| ||||| | | |||||||||| ||||    
T  9603893 gtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactc 9603813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 465 - 548
Target Start/End: Original strand, 41470425 - 41470508
Alignment:
Q  465 gcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtat 548  Q
    ||||||||| ||||||||||||||||||||| |||||||| ||  | | ||||| ||||||| ||| ||| ||| |||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtat 41470508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 446 - 508
Target Start/End: Complemental strand, 31132454 - 31132392
Alignment:
Q  446 gagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgg 508  Q
    ||||| ||||| ||| |||||||||||| ||||||||||||||| ||||| |||||| |||||    
T  31132454 gagagaaaagaaaaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 536
Target Start/End: Complemental strand, 16328006 - 16327921
Alignment:
Q  451 gaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagg 536  Q
    |||||| ||| | |||||||| ||||| ||| |||  |||||||| ||||||||||||||||||| || ||||||| ||| |||||    
T  16328006 gaaagaaaaagtgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaagg 16327921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 24136776 - 24136719
Alignment:
Q  63 caaaccaattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaac 120  Q
    ||||||||||||||||||||| || |||||||||||| ||||| |||| | |||||||    
T  24136776 caaaccaattgtgagcactattttgactcacccaacaaccaaacaaattgaaccaaac 24136719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 11335480 - 11335543
Alignment:
Q  56 aaacaatcaaaccaattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaac 120  Q
    |||||| |||||||||||||||||||||||| ||||| |||||| ||||| |||| | |||||||    
T  11335480 aaacaaacaaaccaattgtgagcactatcttgactca-ccaacaaccaaacaaattgaaccaaac 11335543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 9511787 - 9511733
Alignment:
Q  56 aaacaatcaaaccaattgtgagcactatcttaactcacccaacatccaaataaat 110  Q
    |||||| ||||| ||||||||| |||||||||||||||| |||| ||||| ||||    
T  9511787 aaacaaacaaacgaattgtgaggactatcttaactcacctaacaaccaaacaaat 9511733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 1e-46; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 378 - 549
Target Start/End: Complemental strand, 32869856 - 32869685
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||| ||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  32869856 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 32869757  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatc 549  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||| ||||||||||    
T  32869756 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 32869685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 396 - 551
Target Start/End: Original strand, 22880598 - 22880753
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||||  ||||||||||||||| |||||| ||||||||||| ||||| ||||| ||||||||| | |||||||||| |||||||||||||||||||||    
T  22880598 tttattcccatacacccttgtacaccccatgtattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtca 22880697  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
     | |||| ||||||||||||||||||||||| ||| ||||||| ||||||||||||    
T  22880698 gaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 17598732 - 17598554
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| ||||||| |||||||   ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| |||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggt 17598633  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||| |||||||| |||||| ||||||||||||| | ||||||| ||| ||||||| |||||||||||| ||||    
T  17598632 ccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 31976430 - 31976248
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| |||||||  |||||||| ||||||||||||||| ||||| |||||||||||| ||||| ||||| ||||||||| | ||||||||||    
T  31976430 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccatacattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcg 31976331  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||| || ||||| |||||||| |||||| ||||||||| ||||||| ||||| ||| ||||| | |||||||||||||||||    
T  31976330 gggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 11427796 - 11427616
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||| | |||||||||| | |    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggat 11427697  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcactta--agggtttctatgtatcataactc 556  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||| ||| ||  ||||| |||||||||||| ||||    
T  11427696 ccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 15832755 - 15832577
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| |||||||||||  |||||||  ||||||||||||||| |||||||||||||||||  ||||| ||||  ||||||||||| |  ||||||  | |    
T  15832755 aatgatacgtagacaccctttattccaatacacccttgtacaccccatgcattaggaagatagaagaggagaaaaaagagaaaatgtatttgtgcaggat 15832656  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||||||||||||||||||||||| ||||||||||||| | | ||||||||| ||| ||| |||||||||||| ||||    
T  15832655 ccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactc 15832577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 405 - 551
Target Start/End: Original strand, 23128076 - 23128222
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||||||||||||||||||||||  |||| ||||| ||||||||| | |||||||| | | ||||||||||||||||||| |||||| |    
T  23128076 atacacccttgtacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgt 23128175  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
    |||||||||||||| |||||| |||| ||| ||| ||||| ||||||    
T  23128176 gtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcat 23128222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 413 - 556
Target Start/End: Original strand, 6209422 - 6209565
Alignment:
Q  413 ttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgt 512  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||||| | |||| ||||| |||||||||||||||||| || |||||| |||| ||||    
T  6209422 ttgtacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgt 6209521  T
Q  513 caaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||||  |||||||| ||| ||||||| |||||||||||| ||||    
T  6209522 caaatagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 371 - 556
Target Start/End: Original strand, 31952945 - 31953130
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| |||||||  |||||||| ||||| |||| |||| |||||||| ||||||||| |||||  ||| |||||||||| | || ||||    
T  31952945 aaaggaaaatgttacatagacaccatttattctcatacatccttctacaccccatgcactaggaagagagaagagaagatgaaagagaaagtgtgtttgt 31953044  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | ||||||||| |||  || ||||| ||||||||||||||||||| |||||||||| ||| ||||| | ||||| |||||| ||||    
T  31953045 gtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 29858005 - 29857827
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| |||||  |||| ||||||||| | ||||| |||| | |    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 29857906  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||||||||||| |||||| ||||||||| ||| ||||||||| ||  ||| ||| |||||||||||| ||||    
T  29857905 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 373 - 556
Target Start/End: Original strand, 30341277 - 30341460
Alignment:
Q  373 aggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgc 472  Q
    ||||||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||||    
T  30341277 aggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgc 30341376  T
Q  473 gaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  30341377 ggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 15989960 - 15990142
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  15989960 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 15990059  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  15990060 gggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 371 - 556
Target Start/End: Original strand, 15507939 - 15508124
Alignment:
Q  371 aaaggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgt 470  Q
    ||||||||||||||| ||||||| ||||| |   ||||| ||||||||| |||||  ||||||||||| |||||  ||| |||||||||| | | |||||    
T  15507939 aaaggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattaggaagagagaagagaagaagaaagagaaagtgtacttgt 15508038  T
Q  471 gcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    ||| ||||||  || | || ||||| |||||| |||||||||||| |||||||||| ||| ||||||| | |||||||||||||||    
T  15508039 gcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 407 - 544
Target Start/End: Original strand, 31109351 - 31109488
Alignment:
Q  407 acacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgt 506  Q
    ||||||||||| | ||||||||||||||||||  |||| ||||| ||||||||| | | ||| |||| |||| |||||||||||||||| |||||| |||    
T  31109351 acacccttgtataccccatgcattaggaagagaaaagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgt 31109450  T
Q  507 gggtgtcaaagggtgtattgtcacttaagggtttctat 544  Q
    || ||||||||||||||||| ||| ||||||| |||||    
T  31109451 ggatgtcaaagggtgtattgccacctaagggtgtctat 31109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 374 - 556
Target Start/End: Original strand, 31110679 - 31110859
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||   ||||||   ||||||| ||||||| ||||| |||||||||||| |||||  |||| ||||||||| | |||||||||     
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccatacattaggaagagagaagagtagagaaaagagaaagtgtgcttgtgca 31110778  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     |||||| |||  ||||||||| |||||  |||| |||||||||||||||||| ||| ||||| | |||||||||||||||||    
T  31110779 gggtccatgtggttacgtgtcagatttt--tgtgagtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 374 - 556
Target Start/End: Complemental strand, 4231730 - 4231548
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcg 473  Q
    |||||||||||| ||||||| ||||| |   ||||||||||||||| |||||| ||||||||||| |||||  ||| |||||||||| | | ||||||||    
T  4231730 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcg 4231631  T
Q  474 aggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
     ||||||  || | |||||||| |||||| |||||||| ||| |||||||||| ||| ||| | | | |||| ||||||||||    
T  4231630 gggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 389 - 549
Target Start/End: Complemental strand, 946543 - 946383
Alignment:
Q  389 gacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgacta 488  Q
    ||||| ||||||| | |||||  |||||||||| |||||||||||||||| ||||| ||||| ||||||||| | |||| | ||| | |  |||||||||    
T  946543 gacactttttattgtcatacattcttgtacatctcatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgacta 946444  T
Q  489 cgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatc 549  Q
     |||||| ||||||  || |||||||||||||||||| |||| ||||| | ||||||||||    
T  946443 ggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 396 - 551
Target Start/End: Original strand, 28536428 - 28536581
Alignment:
Q  396 tttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtca 495  Q
    |||||| | ||||||||||||||| |||||||| |||||||||||||||  |||  ||||||||| | |||||||| | ||||||| ||||  |||||||    
T  28536428 tttattttcatacacccttgtacaccccatgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggggtccacatgac--cgtgtca 28536525  T
Q  496 aatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcat 551  Q
     |||||| |||||||||||| || ||||||| ||| ||||| | | ||||||||||    
T  28536526 gatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 424 - 552
Target Start/End: Original strand, 9379680 - 9379808
Alignment:
Q  424 atgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgta 523  Q
    |||||||||||||||  ||||  ||| |||||||||||| || ||||| ||| ||||| || | ||||||||||||||| | |||||||||| || ||||    
T  9379680 atgcattaggaagagaaaagagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgta 9379779  T
Q  524 ttgtcacttaagggtttctatgtatcata 552  Q
    ||||||  ||||| | |||||||||||||    
T  9379780 ttgtcatctaaggatgtctatgtatcata 9379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 512
Target Start/End: Complemental strand, 30870183 - 30870058
Alignment:
Q  387 tagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgac 486  Q
    |||||||  |||||| | ||||||| ||||||| || ||  | ||| ||||| ||||| ||||||||||||||||| |||||||||| |||||| |||||    
T  30870183 tagacaccctttattttcatacacctttgtacaccctatatactagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgac 30870084  T
Q  487 tacgtgtcaaatttttatgtgggtgt 512  Q
     || ||| | |||||||| |||||||    
T  30870083 cacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 434 - 556
Target Start/End: Complemental strand, 12732604 - 12732482
Alignment:
Q  434 aagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcactta 533  Q
    ||||| ||||| |||| |||||||||||| ||||| || | | ||||| |  | |||||||| |||||| |||||||||||| |  | ||||| ||||||    
T  12732604 aagagagaagaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccactta 12732505  T
Q  534 agggtttctatgtatcataactc 556  Q
    ||  | |||||||||||| ||||    
T  12732504 agaatgtctatgtatcattactc 12732482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 130
Target Start/End: Complemental strand, 21862027 - 21861953
Alignment:
Q  56 aaacaatcaaaccaattgtgagcactatcttaactcacccaacatccaaataaatcggaccaaactgaaccaaat 130  Q
    |||||| ||||||||||||||| ||||| || |||||| ||| | |||||||||| | |||||||  ||||||||    
T  21862027 aaacaaacaaaccaattgtgagaactattttgactcactcaaaaaccaaataaattgaaccaaacgaaaccaaat 21861953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 22421997 - 22422042
Alignment:
Q  374 ggaaaatgttacgtagacacattttattcttatacacccttgtaca 419  Q
    |||||||||||| |||||||  |||||||| |||||||||||||||    
T  22421997 ggaaaatgttacatagacaccatttattctcatacacccttgtaca 22422042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 88; Significance: 8e-42; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 405 - 556
Target Start/End: Original strand, 10058 - 10209
Alignment:
Q  405 atacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttat 504  Q
    ||||||||||||||| || ||||||||||||||| ||||| ||||| ||||||||| | ||||||| || ||||||||||||||||||||| ||||||||    
T  10058 atacacccttgtacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttat 10157  T
Q  505 gtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||| ||||||||| ||||||| ||| ||| ||| |||||||||||||||||    
T  10158 gtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 375 - 556
Target Start/End: Original strand, 848 - 1029
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 474  Q
    ||||||||||| || ||||  |||||||  |||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||     
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  475 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | | |||||||||||||||||  ||||| ||||| ||| ||||||||||||| ||| ||| | | |||||||||||| ||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 375 - 556
Target Start/End: Original strand, 848 - 1029
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 474  Q
    ||||||||||| || ||||  |||||||  |||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||||| | ||||||||||     
T  848 gaaaatgttacataaacaccctttattcccatacactcttgtacaccccatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgg 947  T
Q  475 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    | | |||||||||||||||||  ||||| ||||| ||| ||||||||||||| ||| ||| | | |||||||||||| ||||    
T  948 gattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 378 - 556
Target Start/End: Complemental strand, 4207 - 4029
Alignment:
Q  378 aatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcgaggt 477  Q
    |||| ||| |||||||  |||||||  ||||||||||||||| |||||||||||||||||| |||||  |||| ||||||||| | ||||| |||| | |    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggat 4108  T
Q  478 ccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgtcacttaagggtttctatgtatcataactc 556  Q
    |||||| ||||||||||| |||||| ||||||||| ||| ||||||||| ||  ||| ||| |||||||||||| ||||    
T  4107 ccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

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Target: scaffold0018 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 375 - 526
Target Start/End: Complemental strand, 152679 - 152528
Alignment:
Q  375 gaaaatgttacgtagacacattttattcttatacacccttgtacatcccatgcattaggaagagggaagatgagaggaaagagaaaatatgcttgtgcga 474  Q
    ||||||||||| ||||||| ||||| |   |||||||||||||||||||||| ||||| ||||| |||||  ||| |||||||||| | |  |||||||     
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcgg 152580  T
Q  475 ggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattg 526  Q
    | ||||  |||| || ||||| |||||| |||||||||||| ||||||||||    
T  152579 gatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattg 152528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 447 - 526
Target Start/End: Complemental strand, 17163 - 17084
Alignment:
Q  447 agaggaaagagaaaatatgcttgtgcgaggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattg 526  Q
    |||||||||||||||| |||||||||| |||||| ||||| || ||||| |||||| ||||| |||| | || |||||||    
T  17163 agaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattg 17084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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