View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5316_low_13 (Length: 422)

Name: NF5316_low_13
Description: NF5316
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5316_low_13
NF5316_low_13
[»] chr4 (56 HSPs)
chr4 (1-406)||(42312506-42312909)
chr4 (1-88)||(33629651-33629738)
chr4 (2-83)||(33629918-33629999)
chr4 (22-88)||(17076986-17077052)
chr4 (22-88)||(17077190-17077256)
chr4 (26-88)||(28245985-28246047)
chr4 (22-88)||(28497260-28497326)
chr4 (1-89)||(43943664-43943752)
chr4 (1-88)||(25753630-25753717)
chr4 (357-403)||(16572253-16572299)
chr4 (328-406)||(18838724-18838802)
chr4 (22-88)||(53720716-53720782)
chr4 (22-89)||(28245782-28245846)
chr4 (23-88)||(39110899-39110964)
chr4 (25-89)||(22865761-22865824)
chr4 (24-83)||(3055780-3055839)
chr4 (1-88)||(5488359-5488446)
chr4 (1-88)||(12016708-12016795)
chr4 (1-88)||(12016916-12017003)
chr4 (12-83)||(50307273-50307344)
chr4 (23-88)||(3640198-3640263)
chr4 (336-406)||(44884448-44884520)
chr4 (1-81)||(52827257-52827337)
chr4 (350-406)||(54863918-54863974)
chr4 (12-88)||(56511289-56511365)
chr4 (12-88)||(56511496-56511572)
chr4 (23-82)||(21647628-21647687)
chr4 (351-406)||(33721713-33721768)
chr4 (22-81)||(40716682-40716741)
chr4 (1-68)||(43972367-43972434)
chr4 (1-88)||(49380905-49380992)
chr4 (1-68)||(51469493-51469560)
chr4 (1-68)||(51470495-51470562)
chr4 (23-82)||(53863903-53863962)
chr4 (22-88)||(3640448-3640514)
chr4 (1-67)||(7806420-7806485)
chr4 (23-85)||(7892699-7892761)
chr4 (23-81)||(10390522-10390580)
chr4 (23-81)||(10390723-10390781)
chr4 (22-88)||(27634372-27634438)
chr4 (22-88)||(29113441-29113507)
chr4 (26-88)||(45684224-45684286)
chr4 (22-88)||(54210369-54210435)
chr4 (24-81)||(5065852-5065909)
chr4 (24-73)||(7198034-7198083)
chr4 (23-88)||(8305002-8305067)
chr4 (1-74)||(8559996-8560069)
chr4 (23-68)||(9758316-9758361)
chr4 (23-88)||(23350791-23350856)
chr4 (47-88)||(33629596-33629637)
chr4 (47-88)||(33629855-33629896)
chr4 (328-385)||(34319524-34319581)
chr4 (12-68)||(990559-990615)
chr4 (24-88)||(1923039-1923103)
chr4 (23-59)||(40197229-40197265)
chr4 (23-71)||(49544341-49544389)
[»] chr3 (60 HSPs)
chr3 (95-293)||(51565563-51565763)
chr3 (311-406)||(32211887-32211982)
chr3 (23-88)||(40230481-40230546)
chr3 (1-82)||(40230664-40230745)
chr3 (328-404)||(35455280-35455356)
chr3 (5-85)||(42604903-42604983)
chr3 (1-90)||(9264525-9264614)
chr3 (1-88)||(35015477-35015564)
chr3 (349-404)||(45261357-45261412)
chr3 (311-406)||(46918561-46918655)
chr3 (1-88)||(50692518-50692605)
chr3 (328-406)||(8825456-8825532)
chr3 (356-406)||(47860600-47860650)
chr3 (1-83)||(49477531-49477613)
chr3 (328-404)||(17003675-17003752)
chr3 (23-68)||(32215577-32215622)
chr3 (313-406)||(43320229-43320322)
chr3 (24-88)||(5440569-5440633)
chr3 (1-81)||(34992868-34992948)
chr3 (320-405)||(52596725-52596812)
chr3 (1-88)||(9264111-9264198)
chr3 (1-88)||(50692315-50692402)
chr3 (12-83)||(53761434-53761505)
chr3 (22-88)||(47702470-47702536)
chr3 (23-88)||(4191169-4191234)
chr3 (23-68)||(29763743-29763788)
chr3 (23-88)||(40926446-40926511)
chr3 (22-83)||(42311210-42311271)
chr3 (23-88)||(54495523-54495588)
chr3 (1-81)||(34992576-34992656)
chr3 (12-88)||(35011856-35011932)
chr3 (22-90)||(37223565-37223633)
chr3 (1-81)||(39956699-39956779)
chr3 (318-397)||(38854576-38854655)
chr3 (1-88)||(39078796-39078883)
chr3 (23-85)||(40926697-40926760)
chr3 (12-67)||(50203893-50203948)
chr3 (1-88)||(51338466-51338553)
chr3 (1-88)||(53640197-53640284)
chr3 (5-68)||(54369051-54369114)
chr3 (350-385)||(55452423-55452458)
chr3 (321-383)||(2564416-2564478)
chr3 (24-74)||(4029692-4029742)
chr3 (43-81)||(10758835-10758873)
chr3 (1-67)||(21832224-21832290)
chr3 (22-88)||(22339733-22339799)
chr3 (23-81)||(26915115-26915173)
chr3 (42-88)||(29369793-29369839)
chr3 (31-89)||(32034082-32034140)
chr3 (361-403)||(40345031-40345073)
chr3 (356-406)||(50452389-50452439)
chr3 (311-384)||(27721333-27721406)
chr3 (23-80)||(32515954-32516011)
chr3 (23-68)||(39269512-39269557)
chr3 (23-68)||(40927042-40927087)
chr3 (23-68)||(44145168-44145213)
chr3 (1-89)||(51642660-51642749)
chr3 (357-397)||(18085656-18085695)
chr3 (358-406)||(25295150-25295198)
chr3 (354-406)||(43105956-43106007)
[»] chr1 (56 HSPs)
chr1 (89-290)||(47977075-47977275)
chr1 (318-406)||(17971460-17971548)
chr1 (3-81)||(1233925-1234003)
chr1 (311-406)||(36437298-36437392)
chr1 (12-88)||(38871191-38871267)
chr1 (340-406)||(28165223-28165289)
chr1 (22-91)||(11581744-11581813)
chr1 (4-88)||(24382388-24382472)
chr1 (24-88)||(42845069-42845133)
chr1 (1-89)||(49895144-49895232)
chr1 (1-88)||(15392017-15392104)
chr1 (1-88)||(39649109-39649196)
chr1 (328-406)||(27442469-27442547)
chr1 (360-406)||(39150278-39150324)
chr1 (23-85)||(41812705-41812767)
chr1 (359-405)||(52336954-52337000)
chr1 (350-406)||(31181150-31181206)
chr1 (357-404)||(9851912-9851959)
chr1 (1-88)||(22892713-22892800)
chr1 (351-406)||(34702197-34702252)
chr1 (1-88)||(52846874-52846961)
chr1 (310-380)||(2619805-2619875)
chr1 (360-406)||(17988381-17988427)
chr1 (352-406)||(31003678-31003732)
chr1 (311-405)||(42745499-42745593)
chr1 (22-83)||(331447-331508)
chr1 (12-89)||(45395543-45395620)
chr1 (5-81)||(49895352-49895426)
chr1 (26-82)||(9632388-9632444)
chr1 (357-405)||(11435554-11435602)
chr1 (1-89)||(11590411-11590499)
chr1 (22-74)||(15391754-15391806)
chr1 (12-88)||(29413340-29413416)
chr1 (1-85)||(43361577-43361661)
chr1 (1-68)||(2697356-2697423)
chr1 (1-88)||(2997286-2997373)
chr1 (1-88)||(29273250-29273337)
chr1 (22-85)||(33342324-33342387)
chr1 (2-68)||(4022151-4022217)
chr1 (24-74)||(10017376-10017426)
chr1 (24-74)||(20429022-20429072)
chr1 (23-81)||(22826792-22826850)
chr1 (12-74)||(38870985-38871047)
chr1 (22-88)||(39648924-39648989)
chr1 (2-68)||(43423291-43423357)
chr1 (42-88)||(47377827-47377873)
chr1 (26-88)||(49142674-49142735)
chr1 (22-88)||(52921513-52921579)
chr1 (24-89)||(13959393-13959458)
chr1 (22-71)||(15391828-15391877)
chr1 (328-397)||(24547398-24547467)
chr1 (311-388)||(32715648-32715725)
chr1 (24-85)||(43361805-43361866)
chr1 (24-88)||(45982174-45982238)
chr1 (357-405)||(46443703-46443751)
chr1 (24-88)||(48558369-48558433)
[»] chr6 (34 HSPs)
chr6 (1-88)||(11316835-11316922)
chr6 (1-88)||(11317040-11317127)
chr6 (3-73)||(30526845-30526915)
chr6 (5-88)||(15102654-15102737)
chr6 (318-406)||(180302-180390)
chr6 (5-88)||(15102781-15102863)
chr6 (22-88)||(26394543-26394609)
chr6 (311-406)||(19780186-19780281)
chr6 (328-405)||(606716-606793)
chr6 (23-88)||(25998809-25998874)
chr6 (23-88)||(26098334-26098399)
chr6 (1-88)||(29742461-29742546)
chr6 (1-68)||(10418363-10418430)
chr6 (1-88)||(16877035-16877122)
chr6 (1-88)||(28149785-28149872)
chr6 (23-88)||(25999015-25999080)
chr6 (350-385)||(7926799-7926834)
chr6 (1-88)||(15101136-15101223)
chr6 (1-88)||(16590176-16590263)
chr6 (1-88)||(16605117-16605204)
chr6 (359-406)||(28363787-28363834)
chr6 (28-83)||(30539417-30539472)
chr6 (43-89)||(6623492-6623538)
chr6 (22-88)||(11313428-11313494)
chr6 (22-88)||(19712450-19712516)
chr6 (40-78)||(30527044-30527082)
chr6 (13-66)||(31910-31963)
chr6 (348-405)||(3611554-3611610)
chr6 (28-89)||(15293926-15293987)
chr6 (23-88)||(19291965-19292030)
chr6 (23-88)||(26098746-26098811)
chr6 (25-81)||(8929845-8929901)
chr6 (28-68)||(30539247-30539287)
chr6 (245-293)||(34029554-34029602)
[»] chr8 (39 HSPs)
chr8 (310-406)||(36054770-36054866)
chr8 (322-406)||(8251202-8251286)
chr8 (1-89)||(30176489-30176577)
chr8 (3-81)||(5496560-5496638)
chr8 (24-84)||(30117484-30117544)
chr8 (1-68)||(36037202-36037269)
chr8 (1-88)||(43599303-43599390)
chr8 (24-78)||(26122792-26122846)
chr8 (1-67)||(36039819-36039885)
chr8 (311-406)||(38209617-38209710)
chr8 (22-89)||(12941561-12941628)
chr8 (351-406)||(30112523-30112578)
chr8 (1-88)||(40902418-40902505)
chr8 (361-407)||(30654259-30654305)
chr8 (350-395)||(16890380-16890425)
chr8 (357-406)||(31658854-31658903)
chr8 (357-406)||(40694233-40694282)
chr8 (1-89)||(8559572-8559660)
chr8 (22-89)||(18313775-18313842)
chr8 (22-88)||(5720913-5720979)
chr8 (23-73)||(25186779-25186829)
chr8 (352-404)||(1445349-1445402)
chr8 (43-88)||(15857171-15857216)
chr8 (31-88)||(33435875-33435932)
chr8 (22-83)||(35561663-35561724)
chr8 (23-88)||(43901064-43901129)
chr8 (1-81)||(10989266-10989346)
chr8 (1-81)||(15011054-15011134)
chr8 (22-90)||(20760706-20760774)
chr8 (1-68)||(34248089-34248156)
chr8 (42-88)||(30065983-30066029)
chr8 (31-89)||(33435670-33435728)
chr8 (350-404)||(35431579-35431633)
chr8 (355-405)||(43594503-43594553)
chr8 (358-403)||(2520232-2520277)
chr8 (43-88)||(8559745-8559790)
chr8 (357-406)||(40696654-40696703)
chr8 (22-82)||(8056283-8056343)
chr8 (1-73)||(42228778-42228850)
[»] chr7 (61 HSPs)
chr7 (4-89)||(40703887-40703972)
chr7 (3-89)||(5775873-5775959)
chr7 (1-89)||(6751734-6751822)
chr7 (1-88)||(6751530-6751617)
chr7 (1-83)||(6813103-6813185)
chr7 (320-406)||(41508064-41508150)
chr7 (1-88)||(6813308-6813395)
chr7 (3-65)||(258444-258506)
chr7 (22-88)||(9378992-9379058)
chr7 (5-82)||(13310454-13310531)
chr7 (361-406)||(46341502-46341547)
chr7 (12-88)||(16565090-16565166)
chr7 (12-88)||(16600496-16600572)
chr7 (328-383)||(6549222-6549277)
chr7 (22-88)||(10903530-10903596)
chr7 (22-88)||(23821722-23821788)
chr7 (23-88)||(33855683-33855748)
chr7 (1-74)||(40703677-40703750)
chr7 (12-88)||(4258240-4258316)
chr7 (1-89)||(6782817-6782905)
chr7 (12-88)||(16564886-16564962)
chr7 (12-88)||(16600700-16600776)
chr7 (354-406)||(37048573-37048625)
chr7 (24-88)||(48113989-48114053)
chr7 (367-406)||(6549167-6549206)
chr7 (1-88)||(6783030-6783117)
chr7 (359-402)||(9183339-9183382)
chr7 (22-89)||(9378784-9378851)
chr7 (311-398)||(12506663-12506750)
chr7 (357-404)||(20949074-20949121)
chr7 (1-88)||(29252568-29252655)
chr7 (25-88)||(35866688-35866751)
chr7 (22-89)||(39808643-39808710)
chr7 (22-85)||(47856037-47856100)
chr7 (23-88)||(2179646-2179712)
chr7 (22-88)||(10903323-10903389)
chr7 (361-406)||(2195810-2195855)
chr7 (23-88)||(30768410-30768475)
chr7 (23-88)||(31357722-31357787)
chr7 (23-88)||(33855473-33855538)
chr7 (12-88)||(4258036-4258112)
chr7 (354-406)||(17757509-17757561)
chr7 (24-88)||(23390582-23390646)
chr7 (353-401)||(40016980-40017028)
chr7 (350-406)||(46101310-46101366)
chr7 (13-81)||(49040565-49040633)
chr7 (1-68)||(1661216-1661283)
chr7 (311-398)||(12485231-12485318)
chr7 (27-90)||(21557006-21557069)
chr7 (24-83)||(36621019-36621077)
chr7 (1-68)||(37272070-37272137)
chr7 (1-67)||(7135268-7135334)
chr7 (352-406)||(7307436-7307490)
chr7 (349-387)||(17205122-17205160)
chr7 (23-81)||(33833949-33834007)
chr7 (23-68)||(43366419-43366464)
chr7 (362-406)||(46572383-46572428)
chr7 (357-405)||(508464-508512)
chr7 (1-65)||(2232111-2232175)
chr7 (22-74)||(8681890-8681942)
chr7 (1-89)||(36237793-36237881)
[»] chr2 (40 HSPs)
chr2 (311-406)||(3269312-3269407)
chr2 (311-406)||(3269871-3269966)
chr2 (318-406)||(3268760-3268848)
chr2 (311-406)||(38496428-38496523)
chr2 (23-91)||(12419827-12419895)
chr2 (23-91)||(12431887-12431955)
chr2 (1-88)||(883626-883713)
chr2 (1-88)||(884049-884136)
chr2 (311-406)||(19285835-19285930)
chr2 (337-406)||(3711936-3712004)
chr2 (22-90)||(19859915-19859983)
chr2 (1-89)||(20999014-20999102)
chr2 (22-85)||(4721850-4721913)
chr2 (1-88)||(17727396-17727483)
chr2 (22-89)||(39386661-39386728)
chr2 (355-398)||(44883269-44883312)
chr2 (23-81)||(1218927-1218985)
chr2 (22-88)||(6986462-6986528)
chr2 (22-88)||(13839305-13839371)
chr2 (22-88)||(19860029-19860095)
chr2 (312-405)||(40442674-40442767)
chr2 (349-405)||(40503868-40503924)
chr2 (22-81)||(3435532-3435591)
chr2 (1-88)||(16006969-16007056)
chr2 (22-85)||(17265021-17265084)
chr2 (1-88)||(33986000-33986087)
chr2 (1-88)||(34775349-34775436)
chr2 (22-68)||(18901910-18901956)
chr2 (22-68)||(27545162-27545208)
chr2 (26-88)||(29695389-29695451)
chr2 (22-88)||(32667175-32667241)
chr2 (28-81)||(4772820-4772873)
chr2 (12-88)||(8044581-8044658)
chr2 (23-88)||(10542110-10542175)
chr2 (26-83)||(26847292-26847349)
chr2 (349-406)||(38214106-38214163)
chr2 (22-74)||(12432111-12432163)
chr2 (20-68)||(21734428-21734476)
chr2 (24-88)||(25621333-25621397)
chr2 (358-406)||(39063692-39063740)
[»] chr5 (46 HSPs)
chr5 (310-406)||(18704953-18705049)
chr5 (22-83)||(3015667-3015728)
chr5 (22-88)||(3015463-3015529)
chr5 (321-406)||(6688752-6688837)
chr5 (3-88)||(18107506-18107590)
chr5 (12-89)||(39268009-39268086)
chr5 (1-89)||(20720575-20720663)
chr5 (23-80)||(17135519-17135576)
chr5 (23-88)||(38376723-38376788)
chr5 (23-88)||(43490303-43490368)
chr5 (358-406)||(3629307-3629355)
chr5 (1-88)||(48129-48216)
chr5 (1-88)||(2908587-2908674)
chr5 (22-89)||(3762897-3762964)
chr5 (1-80)||(35527013-35527092)
chr5 (23-81)||(36307970-36308027)
chr5 (22-88)||(37781890-37781956)
chr5 (357-406)||(10656506-10656555)
chr5 (26-67)||(22732787-22732828)
chr5 (357-406)||(27193012-27193061)
chr5 (23-88)||(28358082-28358147)
chr5 (24-85)||(30870933-30870994)
chr5 (22-82)||(8812700-8812760)
chr5 (1-89)||(13413575-13413663)
chr5 (24-88)||(34457295-34457359)
chr5 (1-81)||(37656757-37656837)
chr5 (12-88)||(39268218-39268294)
chr5 (355-406)||(73565-73616)
chr5 (23-89)||(18914415-18914481)
chr5 (42-88)||(21019936-21019982)
chr5 (42-88)||(29008064-29008110)
chr5 (23-81)||(40961748-40961806)
chr5 (26-88)||(43490513-43490575)
chr5 (24-88)||(10516315-10516380)
chr5 (23-88)||(18914208-18914273)
chr5 (361-406)||(19296255-19296300)
chr5 (357-406)||(43442044-43442092)
chr5 (1-61)||(1892115-1892175)
chr5 (24-88)||(1893780-1893844)
chr5 (359-387)||(3257326-3257354)
chr5 (4-88)||(17130017-17130096)
chr5 (12-88)||(18107825-18107901)
chr5 (12-68)||(30329848-30329904)
chr5 (23-67)||(30592441-30592485)
chr5 (23-83)||(32501208-32501268)
chr5 (22-82)||(40169087-40169147)
[»] scaffold0836 (1 HSPs)
scaffold0836 (340-406)||(3006-3072)
[»] scaffold0024 (1 HSPs)
scaffold0024 (311-406)||(154295-154390)
[»] scaffold0989 (1 HSPs)
scaffold0989 (3-83)||(2974-3054)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-81)||(76851-76931)
[»] scaffold0434 (2 HSPs)
scaffold0434 (1-88)||(13298-13385)
scaffold0434 (1-88)||(13505-13592)
[»] scaffold0088 (1 HSPs)
scaffold0088 (357-406)||(51274-51323)
[»] scaffold0015 (1 HSPs)
scaffold0015 (349-405)||(38931-38987)
[»] scaffold0060 (1 HSPs)
scaffold0060 (43-80)||(13699-13736)
[»] scaffold1809 (1 HSPs)
scaffold1809 (350-406)||(595-651)
[»] scaffold1138 (1 HSPs)
scaffold1138 (1-81)||(1898-1978)
[»] scaffold0054 (1 HSPs)
scaffold0054 (22-74)||(21309-21361)


Alignment Details
Target: chr4 (Bit Score: 341; Significance: 0; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 1 - 406
Target Start/End: Complemental strand, 42312909 - 42312506
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataacccgtaaagaa 100  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||    
T  42312909 cggcttgtgaagtgaggggttcctcctctttataaactttcatcaagagtctcatctatccgatatggaacttgagttttttccaataacccgtaaagaa 42312810  T
Q  101 aatagtttggatattgaactatttcaattgccacctaattaacaatgttaacttatagcatatttgctttagttatagaacattctatcatgaaaaatct 200  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42312809 aatagtttggatattgaactatttcaattgcgacctaattaacaatgttaacttatagcatatttgctttagttatagaacattctatcatgaaaaatct 42312710  T
Q  201 cattttggcattggagcatatggcttatatagtccacgtattgattttgcagttcgggatgctgattcaatacctctttgacaaatttccaaatatagaa 300  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42312709 cattttggcattggagcatatgacttatatagtccacgtattgattttgcagttcgggatgctgattcaatacctctttgacaaatttccaaatgtagaa 42312610  T
Q  301 gatacttcctcctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaat-atcacaacttttaaggtatagttattgc 399  Q
    ||||||||   |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  42312609 gatacttc---ctccgatcttatatacaagaaaatattcaaaaaattatttggtcttatttataaaaaaataatcacaacttttaaggtatagttattgc 42312513  T
Q  400 ttaaaag 406  Q
    |||||||    
T  42312512 ttaaaag 42312506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 33629738 - 33629651
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||| ||||||||  |||||| |||||||||| |||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  33629738 cggcttgtgatgtgaggagtacctcctatttataaactctcatcaagagtctcatctatccaatgtggaacttgggtttttcccaata 33629651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 33629999 - 33629918
Alignment:
Q  2 ggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||| ||||||||  |||||| |||||||||| |||||||||||||||||||||| |||||| ||||||||||||||    
T  33629999 ggcttgtgatgtgaggagtgcctcctatttataaactctcatcaagagtctcatctatccaatgtgggacttgagtttttcc 33629918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 17076986 - 17077052
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  17076986 cctcctctttatgaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaata 17077052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 17077190 - 17077256
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  17077190 cctcctctttatgaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaata 17077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 28246047 - 28245985
Alignment:
Q  26 ctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  28246047 ctctttataaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcccaata 28245985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 28497260 - 28497326
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  28497260 cctcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 28497326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43943752 - 43943664
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||||| |||||    
T  43943752 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 43943664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25753630 - 25753717
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| | |||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  25753630 cggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 25753717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 357 - 403
Target Start/End: Original strand, 16572253 - 16572299
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaa 403  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||    
T  16572253 tatttataagaaaatgtcacaacttttaaggtgtagttattgcttaa 16572299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 18838724 - 18838802
Alignment:
Q  328 aagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||| || |||||||| ||||||  ||||||| ||||||| ||| ||||||||||||||| |||||| |||||||    
T  18838724 aagaaaatttttaaaaaactttttggttctatttatgagaaaatgtcataacttttaaggtataattattgtttaaaag 18838802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 53720716 - 53720782
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||| ||||||||| ||||| ||||| ||||||||||||||| |||| ||||||||| ||||    
T  53720716 cctcctcttaataaacttttatcaaaagtcttatctatccgatgtgggacttcagtttttcccaata 53720782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 28245846 - 28245782
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||||||||||||||| ||||   |||||||||||||||||||||| ||||| |||||||| |||||    
T  28245846 cctcctctttataaactctcat---gagtctcatctatccgatgtgggacttgggtttttcccaataa 28245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 39110964 - 39110899
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||| ||| |  |||||||||| ||||||||||||||| |||||||||||||| ||||    
T  39110964 ctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 39110899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 22865824 - 22865761
Alignment:
Q  25 cctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||||||||| | |||||| |||| ||||||||||||||| |||||||||||||| |||||    
T  22865824 cctctttataaactattatcaagggtcttatctatccgatgtgg-acttgagtttttcccaataa 22865761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 3055839 - 3055780
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||||||||| ||||||||||||  |||||||| |||||| ||||| ||||||||    
T  3055839 tcctctttataaactctcatcaagagtcctatctatccaatgtgggacttgggtttttcc 3055780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5488446 - 5488359
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| || |||||||||||| ||||| |||||||| ||||    
T  5488446 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatttatccgatgtgggacttgggtttttcccaata 5488359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12016708 - 12016795
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  12016708 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 12016795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12016916 - 12017003
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  12016916 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 12017003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 50307344 - 50307273
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||  ||||| ||||||||||| |  |||||||||| ||||||||||||||| ||||| ||||||||    
T  50307344 gtgaggagtgcctccgctttataaactcttgtcaagagtcttatctatccgatgtgggacttgggtttttcc 50307273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 3640263 - 3640198
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||| |||||||| | ||||||||||| |||||||||| |||| || ||||||||||| ||||    
T  3640263 ctcctctatataaactcttatcaagagtcttatctatccgacgtgggacatgagtttttcccaata 3640198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 44884520 - 44884448
Alignment:
Q  336 attcaaaaaactatttggtcttatttataagaaaatatcacaac--ttttaaggtatagttattgcttaaaag 406  Q
    |||||||||| | ||||||| ||| ||||||||||| |||||||  ||||||||| ||||||||| |||||||    
T  44884520 attcaaaaaagtttttggtcctatatataagaaaatgtcacaacttttttaaggtgtagttattgtttaaaag 44884448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 52827257 - 52827337
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||| | ||||||||  ||||||||||||||||| | ||||||||||  |||||||| |||||  ||||| ||||||    
T  52827257 cggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctatccaatgtgagacttgggttttt 52827337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 54863918 - 54863974
Alignment:
Q  350 ttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| ||||||||||||||  ||||||||||||||||| | |||||| |||||||    
T  54863918 ttggtcctatttataagaaaaagtcacaacttttaaggtacatttattgtttaaaag 54863974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 56511365 - 56511289
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  ||||||||||||||||| | ||||||||||| |||||  | |||||| ||||| |||||||| ||||    
T  56511365 gtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaata 56511289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 56511572 - 56511496
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  ||||||||||||||||| | ||||||||||| |||||  | |||||| ||||| |||||||| ||||    
T  56511572 gtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaata 56511496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 21647628 - 21647687
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttc 82  Q
    ||||||||||||| || | ||||||||||  ||||||||||||||| |||||| ||||||    
T  21647628 ctcctctttataacctcttatcaagagtcatatctatccgatgtgggacttgaatttttc 21647687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 33721768 - 33721713
Alignment:
Q  351 tggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||| ||||||||||||||| |||||| |||||| || ||||||||| |||||||    
T  33721768 tggtcctatttataagaaaatgtcacaatttttaatgtgtagttattgtttaaaag 33721713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 40716682 - 40716741
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    ||||||||||||| ||| |  |||||||||| |||||| |||||||| ||||||||||||    
T  40716682 cctcctctttatatactattctcaagagtcttatctatacgatgtgggacttgagttttt 40716741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 43972434 - 43972367
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||| | ||||||||  |||||||||||| ||||||  |||||||||  |||||||||||||||    
T  43972434 cggcttgtaaggtgaggagtgcctcctctttatcaacttttctcaagagtcctatctatccgatgtgg 43972367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49380905 - 49380992
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||  |||||  ||||||| ||||    
T  49380905 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttggatttttcccaata 49380992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 51469560 - 51469493
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||| | ||||||||  ||||||||||||||||| |  |||||||||  |||||||||||||||    
T  51469560 cggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgg 51469493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 51470562 - 51470495
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||| | ||||||||| ||||||| ||||||||| |  |||||||||  |||||||||||||||    
T  51470562 cggcttgtaaggtgaggagagcctcctccttataaactcttctcaagagtcctatctatccgatgtgg 51470495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 53863962 - 53863903
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttc 82  Q
    |||||||||||||||| | ||||| ||||| ||||||||||||| | ||||| |||||||    
T  53863962 ctcctctttataaactattatcaaaagtcttatctatccgatgttggacttgggtttttc 53863903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 3640514 - 3640448
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||| | ||||||||||| ||||||||||||||| |  ||||||||||| ||||    
T  3640514 cctcctctatttaaactcttatcaagagtcttatctatccgatgtgggagatgagtttttcccaata 3640448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7806420 - 7806485
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtg 67  Q
    |||||||| | ||||||||   ||||||||||||| || ||||||||||||| ||||||||||||||    
T  7806420 cggcttgtaaggtgaggagtgtctcctctttataagctatcatcaagagtct-atctatccgatgtg 7806485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 7892699 - 7892761
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    ||||||| ||||||||   ||||||||||| ||||||||||||||| |||||| |||| ||||    
T  7892699 ctcctctatataaactcatatcaagagtcttatctatccgatgtgggacttgaattttcccaa 7892761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 10390522 - 10390580
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||||||||||| | |||||||| || |||||||| |||||| |||||| |||||    
T  10390522 ctcctctttataaactattatcaagagacttatctatccaatgtgggacttgaattttt 10390580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 10390723 - 10390781
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||||||||||| | |||||||| || || |||||||||||  ||||||||||||    
T  10390723 ctcctctttataaactattatcaagagacttatatatccgatgtgtgacttgagttttt 10390781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 27634372 - 27634438
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||| ||| |  |||||||||| ||||||||||||||| ||||  |||||||| ||||    
T  27634372 cctcctctttatatactcttctcaagagtcttatctatccgatgtgggactttggtttttcccaata 27634438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 29113507 - 29113441
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| |  |||||||||| ||||||| ||||||| || || |||||||| ||||    
T  29113507 cctcctctttataaactcttctcaagagtcttatctatctgatgtgggacatgggtttttcccaata 29113441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 45684224 - 45684286
Alignment:
Q  26 ctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||| |||||||||| ||||||||||  ||||||||||||||| || || |||||||| ||||    
T  45684224 ctctatataaacttttatcaagagtcgtatctatccgatgtgggacatgggtttttcccaata 45684286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 54210435 - 54210369
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||| ||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  54210435 cctcctctttatatactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 54210369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 5065909 - 5065852
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    ||||||||||| | |||  |||||||||| ||||||||||||||  ||||||||||||    
T  5065909 tcctctttatatatttttttcaagagtcttatctatccgatgtgagacttgagttttt 5065852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 7198034 - 7198083
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaactt 73  Q
    ||||||||||||||| | ||||||||||| |||||||| |||||| ||||    
T  7198034 tcctctttataaactcttatcaagagtcttatctatccaatgtgggactt 7198083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 8305002 - 8305067
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||| |||||||| | ||||| ||||| ||||||||||||| | || ||||||||||| ||||    
T  8305002 ctcctctatataaactcttatcaaaagtcttatctatccgatgtaggacatgagtttttcccaata 8305067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8559996 - 8560069
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    |||||| | |||||||||   |||||||  |||||||| | ||||||||||| ||||||||||||||| |||||    
T  8559996 cggcttctaaagtgaggattgcctcctcgatataaactcttatcaagagtcttatctatccgatgtgggacttg 8560069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 9758361 - 9758316
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||| |||||||| | ||||||||||| |||||||||||||||    
T  9758361 ctcctctatataaactcttatcaagagtcttatctatccgatgtgg 9758316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 23350856 - 23350791
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||| ||| | ||||||||||| || |||||||||||| | ||| |||||||| ||||    
T  23350856 ctcctctttatatactcttatcaagagtcttatttatccgatgtgggatttgggtttttcccaata 23350791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 33629637 - 33629596
Alignment:
Q  47 gagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||||||||| ||||| |||||||| ||||    
T  33629637 gagtctcatctatccgatgtgggacttgggtttttcccaata 33629596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 88
Target Start/End: Complemental strand, 33629896 - 33629855
Alignment:
Q  47 gagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||||||||| ||||| |||||||| ||||    
T  33629896 gagtctcatctatccgatgtgggacttgggtttttcccaata 33629855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 34319524 - 34319581
Alignment:
Q  328 aagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaa 385  Q
    |||||||| |||||||||  | |||||| ||||||||||||||| |||||| ||||||    
T  34319524 aagaaaattttcaaaaaaaaacttggtcctatttataagaaaatgtcacaatttttaa 34319581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 990615 - 990559
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||||  ||||||||||||||||| |  |||||||| | |||||||||||||||    
T  990615 gtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgtgg 990559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 1923039 - 1923103
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||| |  |||||||||| ||||||| ||||||| || || |||||||| ||||    
T  1923039 tcctctttataaactcttctcaagagtcttatctatctgatgtgggacatgggtttttcccaata 1923103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 40197265 - 40197229
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctat 59  Q
    |||||||||||||||| | ||||||||||||||||||    
T  40197265 ctcctctttataaactcttatcaagagtctcatctat 40197229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 49544389 - 49544341
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaac 71  Q
    |||||||||||||||| |  |||||| ||| ||||||||||||||||||    
T  49544389 ctcctctttataaactcttctcaagaatcttatctatccgatgtggaac 49544341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 8e-37; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 95 - 293
Target Start/End: Original strand, 51565563 - 51565763
Alignment:
Q  95 aaagaaaatagtttggatattgaactatttcaattgccacctaattaacaatgttaacttatagcatatttgctttagttataga----acattctatca 190  Q
    ||||||||||||||  | | ||||||||||||||||||||| || |||||||||| ||| ||  ||||||| ||| |||||||||     |||||||| |    
T  51565563 aaagaaaatagtttacacactgaactatttcaattgccaccaaaataacaatgtttactgatgacatattttcttgagttatagagcattcattctatta 51565662  T
Q  191 tgaaaaatctcattttggcattggagcatatggcttatatagtccacgtattgattttgcagttcgggatgctgattcaatacctctttgacaaatttcc 290  Q
    |||| ||||||||||||||| || |||||||| ||  || |||||| | ||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  51565663 tgaagaatctcattttggcactgtagcatatgtct--taaagtccatgcattgattttgcagttcgggatgctgattgcatacctctttgagaaatttcc 51565760  T
Q  291 aaa 293  Q
    |||    
T  51565761 aaa 51565763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 311 - 406
Target Start/End: Complemental strand, 32211982 - 32211887
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| ||||||||| |||||||| ||||||||| |  |||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  32211982 cctccggtcctatatataagaaaattttcaaaaaaattgttggtcttatttataagaaaatttcacaacttttaaggtgtagttattgtttaaaag 32211887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 40230481 - 40230546
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  40230481 ctcctctttataaactctcatcaagagtctcatctatccgatgtggaacttgggtttttcccaata 40230546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 40230664 - 40230745
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttc 82  Q
    |||||||| | |||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  40230664 cggcttgtaaggtgaggattgcctcctctttataaactctcatcaagagtctcatctatccgatgtggaacttgggtttttc 40230745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 35455280 - 35455356
Alignment:
Q  328 aagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaa 404  Q
    |||||||| |||||||||  | |||||||||||||||||||||| |||||||||||||||| || ||||||||||||    
T  35455280 aagaaaattttcaaaaaaaaaattggtcttatttataagaaaatgtcacaacttttaaggtgtaattattgcttaaa 35455356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 42604983 - 42604903
Alignment:
Q  5 ttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    |||||||||||||||  || | ||||||||||||| |||||||||||||||||||||||||||  |||||  |||||||||    
T  42604983 ttgtgaagtgaggagtgccccttctttataaacttccatcaagagtctcatctatccgatgtgagacttggatttttccaa 42604903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 9264525 - 9264614
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataac 90  Q
    |||||||| |||||||||   ||||||||||||| ||| |  |||||||||| ||||||||||||||| ||||| |||||||| ||||||    
T  9264525 cggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataac 9264614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 35015564 - 35015477
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||| | |||||||||   ||||||||||||||||||| ||||||||| | ||||||||||||||| |||||  ||||||| ||||    
T  35015564 cggcttataaagtgaggattgcctcctctttataaacttttatcaagagttttatctatccgatgtgggacttggctttttcccaata 35015477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 404
Target Start/End: Original strand, 45261357 - 45261412
Alignment:
Q  349 tttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaa 404  Q
    ||||||| ||||||||||||||| |||||||||||||| | |||||||||||||||    
T  45261357 tttggtcctatttataagaaaatgtcacaacttttaagctgtagttattgcttaaa 45261412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 406
Target Start/End: Complemental strand, 46918655 - 46918561
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||| ||||||  ||| |||||||| || ||||||   ||||||| ||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  46918655 cctcagatccttaatataagaaaatttttaaaaaaagttttggtcctatttataagaaaatgtcacaatttttaagg-atagttattgcttaaaag 46918561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50692605 - 50692518
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| | |||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  50692605 cggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 50692518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 8825532 - 8825456
Alignment:
Q  328 aagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||| |||||||||  ||| |||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  8825532 aagaaaattttcaaaaaaaaatt-ggtcctatttataagaaaatgtcacaa-ttttaaggtgtagttattgcttaaaag 8825456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 356 - 406
Target Start/End: Original strand, 47860600 - 47860650
Alignment:
Q  356 ttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  47860600 ttatttataagaaaatgtcacatcttttaaggtatagttattacttaaaag 47860650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 49477613 - 49477531
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||| ||||| ||||||||    
T  49477613 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcc 49477531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 17003752 - 17003675
Alignment:
Q  328 aagaaaatattcaaaaaactatttggtcttatttataagaaaa-tatcacaacttttaaggtatagttattgcttaaa 404  Q
    |||||||| |||||||||  || ||||| ||||||||| |||| | |||||||||||||||| |||||||||||||||    
T  17003752 aagaaaattttcaaaaaaaaatctggtcctatttataaaaaaaatgtcacaacttttaaggtgtagttattgcttaaa 17003675  T

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Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 32215577 - 32215622
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  32215577 ctcctctttataaactctcatcaagagtctcatctatacgatgtgg 32215622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 406
Target Start/End: Complemental strand, 43320322 - 43320229
Alignment:
Q  313 tccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||| ||| || || ||||| |||||||||   ||||| | ||||||||||||||| |||||||||||||||| | ||||||| |||||||    
T  43320322 tccgatcttatgtataataaaattttcaaaaaaaagtttggacctatttataagaaaatgtcacaacttttaaggtgtggttattgtttaaaag 43320229  T

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Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 5440633 - 5440569
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||| |  ||||||||||  |||||||||||||||||||| |||||||| ||||    
T  5440633 tcctctttataaactcttctcaagagtcttgtctatccgatgtggaacttgggtttttcccaata 5440569  T

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Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34992948 - 34992868
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||||| |||||||   ||||||||||||||||| |  |||||||||| ||||||| ||||||| ||||| ||||||    
T  34992948 cggcttgtgaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 405
Target Start/End: Complemental strand, 52596812 - 52596725
Alignment:
Q  320 ctatatacaagaaaatattcaaaaaactatttggtcttattt--ataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    ||||||| |||||||| || ||| || |||||||||||||||  |||| ||||||| ||||||||||||||  ||||||| |||||||    
T  52596812 ctatatataagaaaattttaaaagaattatttggtcttatttttataaaaaaatattacaacttttaaggtgcagttattacttaaaa 52596725  T

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Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 9264111 - 9264198
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||| ||| |  |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  9264111 cggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 9264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 50692402 - 50692315
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  50692402 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 50692315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 83
Target Start/End: Original strand, 53761434 - 53761505
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||  ||||||||||||||||| | |||||| |||| |||||||||| |||| ||||| ||||||||    
T  53761434 gtgaggagtgcctcctctttataaactcttatcaagggtcttatctatccgaagtgggacttgggtttttcc 53761505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 47702470 - 47702536
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||| ||| ||| |  |||||||||||||||||||||||||| ||||| |||||||| ||||    
T  47702470 cctcctcttcatatactcttctcaagagtctcatctatccgatgtgggacttgtgtttttcccaata 47702536  T

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Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 4191169 - 4191234
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  4191169 ctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 4191234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 29763743 - 29763788
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||    
T  29763743 ctcctctttataaactcttatcaagagtcttatctatccgatgtgg 29763788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 40926511 - 40926446
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||| |||||||| | ||||||||||| ||||||||||||||| || || |||||||| ||||    
T  40926511 ctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 40926446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 42311271 - 42311210
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||||||||||||| |||| || ||  ||||||||||||||| ||||| ||||||||    
T  42311271 cctcctctttataaacttttatcaggattcctatctatccgatgtgggacttgggtttttcc 42311210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 54495588 - 54495523
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| |  |||||||||| ||||||||||||||| |||||  ||||||| ||||    
T  54495588 ctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 54495523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 34992656 - 34992576
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    ||||||||||  ||||||   ||||||||||||||||| |  |||||||||| ||||||| ||||||| ||||| ||||||    
T  34992656 cggcttgtgagatgaggattgcctcctctttataaactcttctcaagagtcttatctatctgatgtgggacttgggttttt 34992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 35011932 - 35011856
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  ||||||||||||||||| | ||||||||||| |||||  | |||||| ||||| |||||||| ||||    
T  35011932 gtgaggagtgcctcctctttataaactcttatcaagagtcttatctactcaatgtgggacttgggtttttcccaata 35011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 37223633 - 37223565
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataac 90  Q
    ||||||||||||||||| |  ||| |||||| ||||||||||||||| ||||  |||||||| ||||||    
T  37223633 cctcctctttataaactcttctcaggagtcttatctatccgatgtgggacttaggtttttcccaataac 37223565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 39956699 - 39956779
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||| ||||||| ||||||||||||    
T  39956699 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatctgatgtgggacttgagttttt 39956779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 397
Target Start/End: Original strand, 38854576 - 38854655
Alignment:
Q  318 tcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttatt 397  Q
    |||||| || |||| ||| |||||| || ||||||||  ||||||||||||||  ||||||||||||| ||||| |||||    
T  38854576 tcctatttataagacaattttcaaacaaatatttggttctatttataagaaaaattcacaacttttaaagtatatttatt 38854655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39078796 - 39078883
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||| ||| ||||| |||||||| ||||    
T  39078796 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatatgggacttgggtttttcccaata 39078883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 40926760 - 40926697
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaac-ttgagtttttccaa 85  Q
    ||||||| |||||||| | ||||||||||| ||||||||||||||| || |||| |||||||||    
T  40926760 ctcctctatataaactcttatcaagagtcttatctatccgatgtgggacattgattttttccaa 40926697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 50203893 - 50203948
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtg 67  Q
    ||||||||  ||||||||||||||||| |  |||||||||| ||||||||||||||    
T  50203893 gtgaggagtgcctcctctttataaactcttctcaagagtcttatctatccgatgtg 50203948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 51338466 - 51338553
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||| ||| |  |||||||||| ||||||| ||||||| ||||| |||||||| ||||    
T  51338466 cggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 51338553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 53640197 - 53640284
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||| ||| |  |||||||||| ||||||| ||||||| ||||| |||||||| ||||    
T  53640197 cggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttcccaata 53640284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 54369114 - 54369051
Alignment:
Q  5 ttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||| ||||||||||  ||||||||||||||||| |  |||||||||  |||||||||||||||    
T  54369114 ttgtaaagtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgg 54369051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 385
Target Start/End: Original strand, 55452423 - 55452458
Alignment:
Q  350 ttggtcttatttataagaaaatatcacaacttttaa 385  Q
    |||||||||||||||||||||| |||||||||||||    
T  55452423 ttggtcttatttataagaaaatgtcacaacttttaa 55452458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 2564416 - 2564478
Alignment:
Q  321 tatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaactttt 383  Q
    |||||| |||||||| ||||||| | | ||||||| || ||||||||||||||||||| ||||    
T  2564416 tatatataagaaaattttcaaaatattttttggtcctaattataagaaaatatcacaaatttt 2564478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 4029692 - 4029742
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    ||||||||||||||| |  |||||||||| ||||||||||||||| |||||    
T  4029692 tcctctttataaactcttctcaagagtcttatctatccgatgtgggacttg 4029742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 10758835 - 10758873
Alignment:
Q  43 tcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||||| ||||||||||||||| ||||||||||||    
T  10758835 tcaagagtcttatctatccgatgtgggacttgagttttt 10758873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21832224 - 21832290
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtg 67  Q
    |||||||||| |||||||   |||| ||||||||||||||  ||||||||||  |||||||||||||    
T  21832224 cggcttgtgaggtgaggattgcctcatctttataaacttttctcaagagtcttgtctatccgatgtg 21832290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 22339799 - 22339733
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||| |||||  ||||||| ||||    
T  22339799 cctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 22339733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 26915173 - 26915115
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    ||||||| |||||||| | ||||||||||| ||||||| ||| ||| ||||||||||||    
T  26915173 ctcctctatataaactcttatcaagagtcttatctatctgatctgggacttgagttttt 26915115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 29369839 - 29369793
Alignment:
Q  42 atcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  29369839 atcaagagtcttatctatccgatgtgggacttgggtttttcccaata 29369793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 32034140 - 32034082
Alignment:
Q  31 tataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| | ||||||||||| |||||| |||||||| || ||||||||||| |||||    
T  32034140 tataaactcttatcaagagtcttatctattcgatgtgggacatgagtttttcccaataa 32034082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 403
Target Start/End: Complemental strand, 40345073 - 40345031
Alignment:
Q  361 tataagaaaatatcacaacttttaaggtatagttattgcttaa 403  Q
    ||||||||||| |||||||||||||||| |||| |||||||||    
T  40345073 tataagaaaatgtcacaacttttaaggtgtagtcattgcttaa 40345031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 406
Target Start/End: Complemental strand, 50452439 - 50452389
Alignment:
Q  356 ttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||||||||| || ||||||||||||  ||||| |||||||    
T  50452439 ttatttataagaaaatatcataatttttaaggtataactattgtttaaaag 50452389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 384
Target Start/End: Original strand, 27721333 - 27721406
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaactttta 384  Q
    |||||| |||| |||| |||||||  ||||||||| | ||| ||| ||||||||||||||| |||||| |||||    
T  27721333 cctccggtcctttatataagaaaaagttcaaaaaaattttttgtcctatttataagaaaatgtcacaattttta 27721406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 32515954 - 32516011
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttt 80  Q
    ||||||| ||||||||   ||||||||||| ||||||||||||||| || ||||||||    
T  32515954 ctcctctatataaactcctatcaagagtcttatctatccgatgtgggacatgagtttt 32516011  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 39269557 - 39269512
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||| |||||||| | ||||||||||| |||||||||||||||    
T  39269557 ctcctctatataaactcttatcaagagtcttatctatccgatgtgg 39269512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 40927087 - 40927042
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||| |||||||| | ||||||||||| |||||||||||||||    
T  40927087 ctcctctatataaactcttatcaagagtcttatctatccgatgtgg 40927042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 44145168 - 44145213
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||||||||||| | ||||||||||| ||||||| |||||||    
T  44145168 ctcctctttataaactattatcaagagtcttatctatctgatgtgg 44145213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 51642660 - 51642749
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaac-ttgagtttttccaaataa 89  Q
    |||||||| | |||||||   ||||||||||||| ||| |  |||||||||| ||||||||||||||| || ||| |||||||| |||||    
T  51642660 cggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggactttgggtttttcccaataa 51642749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 397
Target Start/End: Complemental strand, 18085695 - 18085656
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttatt 397  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  18085695 tatttataagaaaatatcacaa-ttttaaggtgtagttatt 18085656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 406
Target Start/End: Complemental strand, 25295198 - 25295150
Alignment:
Q  358 atttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||| | |||||||||||||| || |||||| |||||||    
T  25295198 atttataagaaaatgttacaacttttaaggtgtaattattgtttaaaag 25295150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 406
Target Start/End: Complemental strand, 43106007 - 43105956
Alignment:
Q  354 tcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||||||  |||||||||||||||| || |||||| |||||||    
T  43106007 tcttatttataagaaaaagtcacaacttttaaggt-tatttattgtttaaaag 43105956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 5e-35; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 47977275 - 47977075
Alignment:
Q  89 acccgtaaagaaaatagtttggatattgaactatttcaattgccacctaattaacaatgttaacttatagcatatttgctttagttatagaacattctat 188  Q
    |||| ||||||||||||| | ||||  |||||||||||||||||||| || |||||||||| ||||    ||||||| ||| ||| ||||||||||||||    
T  47977275 acccataaagaaaatagtctagataccgaactatttcaattgccaccaaaataacaatgtttacttgcgacatattttcttgagtaatagaacattctat 47977176  T
Q  189 catgaaaaatctcattttg-gcattggagcatatggcttatatagtccacgtattgattttgcagttcgggatgctgattcaatacctctttgacaaatt 287  Q
     ||||| |||||||||||  |||||| |||||||| |||| |  ||||| | ||||||||||||||||||||||||||||  |||||| ||||| |||||    
T  47977175 tatgaagaatctcatttttagcattgtagcatatgtcttaaa--gtccatgcattgattttgcagttcgggatgctgattgcatacctatttgagaaatt 47977078  T
Q  288 tcc 290  Q
    |||    
T  47977077 tcc 47977075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 406
Target Start/End: Complemental strand, 17971548 - 17971460
Alignment:
Q  318 tcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||| |||||||| ||||||||||  ||||||| ||||||||||||||  ||||||||||||||||||| |||||| |||||||    
T  17971548 tcctatatataagaaaattttcaaaaaacgttttggtcctatttataagaaaaagtcacaacttttaaggtatatttattgtttaaaag 17971460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 1234003 - 1233925
Alignment:
Q  3 gcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||| ||||||||   |||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  1234003 gcttgtgaggtgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgggttttt 1233925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 406
Target Start/End: Complemental strand, 36437392 - 36437298
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| ||||  ||| |||||||| |||||||||   ||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  36437392 cctccggtccttaatataagaaaattttcaaaaaaagttttggtcctatttataagaaaatgtcacaacttttaagg-atagttattgcttaaaag 36437298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 38871191 - 38871267
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  ||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||| |||||||| ||||    
T  38871191 gtgaggagtgcctcctctttataaacttttatcaagagtcttatctatctgatgtgggacttgggtttttcccaata 38871267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 28165289 - 28165223
Alignment:
Q  340 aaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| ||||||||  ||||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  28165289 aaaaaattatttggttctatttataataaaatgtcacaactttaaaggtatagttattgcttaaaag 28165223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 11581813 - 11581744
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataacc 91  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||| | |||||||||| | |||||||    
T  11581813 cctcctctttatatattttcatcaagagtcttatctatccgatgtgggatttgagttttttccaataacc 11581744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 24382388 - 24382472
Alignment:
Q  4 cttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||  |||||||  ||||||||||||||||| |||||||||||||||| |||||||||| | | ||| |||||||| ||||    
T  24382388 cttgtgagatgaggagtgcctcctctttataaactctcatcaagagtctcatttatccgatgttggatttgggtttttcccaata 24382472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 42845069 - 42845133
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||| | ||||||||||| ||||||| ||||||| |||||||||||||| ||||    
T  42845069 tcctctttataaactcttatcaagagtcttatctatctgatgtggtacttgagtttttcctaata 42845133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 49895232 - 49895144
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||||||||||||||  | ||||| ||||||| ||||||||| | | ||||||||| ||||||  |||||||||||||| |||||    
T  49895232 cggcttgtgaagtgaggagtgcatcctccttataaattttcatcaaaaatttcatctatctgatgtgagacttgagtttttcccaataa 49895144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 15392104 - 15392017
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| |||||||||   ||||||||||||| ||| |  |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  15392104 cggcttgtaaagtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 15392017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 39649109 - 39649196
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  39649109 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 39649196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 27442547 - 27442469
Alignment:
Q  328 aagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||| |||||||||  | |||||| |||||||||||||| |||||||||||||| ||||| ||| || |||||||    
T  27442547 aagaaaattttcaaaaaaaaacttggtcctatttataagaaaaaatcacaacttttaaagtatatttagtgtttaaaag 27442469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 360 - 406
Target Start/End: Complemental strand, 39150324 - 39150278
Alignment:
Q  360 ttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  39150324 ttataagaaaatatcactacttttaaggtgtagttattgcttaaaag 39150278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 41812705 - 41812767
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||  ||||| ||||||||||    
T  41812705 ctcctctttataaactctcatcaagagtctcatttatccaatgtgagacttgggtttttccaa 41812767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 359 - 405
Target Start/End: Complemental strand, 52337000 - 52336954
Alignment:
Q  359 tttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||    
T  52337000 tttataagaaaatgtcacatcttttaaggtatagttattgcttaaaa 52336954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 31181206 - 31181150
Alignment:
Q  350 ttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||| |||||||||||||||| |||||||||||||  ||||||||||| |||||||    
T  31181206 ttggttttatttataagaaaatgtcacaacttttaacttatagttattgtttaaaag 31181150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 404
Target Start/End: Complemental strand, 9851959 - 9851912
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaa 404  Q
    ||||||||||||||| ||||||||||||| || |||||||||||||||    
T  9851959 tatttataagaaaatgtcacaacttttaaagtgtagttattgcttaaa 9851912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 22892713 - 22892800
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||| | ||||||   |||||||||||||| | |||||||||||||||| |||  ||||||| ||||| |||||||| ||||    
T  22892713 cggcttgtgaggcgaggagtgtctcctctttataaagtctcatcaagagtctcatttatttgatgtgggacttgggtttttcccaata 22892800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 34702197 - 34702252
Alignment:
Q  351 tggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||| ||||||| |||||||||| ||||||||||| | |||||||||||||||||    
T  34702197 tggtcatatttattagaaaatatctcaacttttaagttgtagttattgcttaaaag 34702252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 52846874 - 52846961
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||| ||| |  |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  52846874 cggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 52846961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 380
Target Start/End: Complemental strand, 2619875 - 2619805
Alignment:
Q  310 tcctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaact 380  Q
    |||||||||| |||||| || |||| | | |||| | | ||||||||||||||||||||||||||||||||    
T  2619875 tcctccgatcttatatataaaaaaaaaattaaaatattttttggtcttatttataagaaaatatcacaact 2619805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 406
Target Start/End: Complemental strand, 17988427 - 17988381
Alignment:
Q  360 ttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||| |||||||||||||||| ||||||||| |||||||    
T  17988427 ttataagaaaatgtcacaacttttaaggtgtagttattgtttaaaag 17988381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 31003732 - 31003678
Alignment:
Q  352 ggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||| ||||||||||||||| |||||||||||||||| |||||| || |||||||    
T  31003732 ggtcctatttataagaaaatgtcacaacttttaaggtgtagttactgtttaaaag 31003678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 405
Target Start/End: Original strand, 42745499 - 42745593
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    |||||||||||  ||  |||||||  |||||||||  |||||||| ||||||||||||||| |||||| |||| | ||||| |||||| ||||||    
T  42745499 cctccgatccttaatgtaagaaaaatttcaaaaaaaaatttggtcctatttataagaaaatgtcacaatttttgaagtataattattgtttaaaa 42745593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 331447 - 331508
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||||||||||||| |||| || ||  ||||||||||||||| ||||| ||||||||    
T  331447 cctcctctttataaacttttatcaggattcctatctatccgatgtggtacttgggtttttcc 331508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 45395620 - 45395543
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||||||  ||||||| ||||||||| | ||||||||||| ||||||| ||| ||| ||||| |||||||| |||||    
T  45395620 gtgaggagtgcctcctcattataaactcttatcaagagtcttatctatctgatatgggacttgggtttttcccaataa 45395543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 49895426 - 49895352
Alignment:
Q  5 ttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    ||||||| |||||||  |||||| |||||||||  ||||||||||||||||||||| ||| ||  ||||||||||||    
T  49895426 ttgtgaaatgaggagtgcctcctttttataaacgatcatcaagagtctcatctatctgatatg--acttgagttttt 49895352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 9632444 - 9632388
Alignment:
Q  26 ctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttc 82  Q
    ||||||||||||| | | ||||||| | ||||||||||| |||||||||||||||||    
T  9632444 ctctttataaactcttaccaagagttttatctatccgatatggaacttgagtttttc 9632388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 357 - 405
Target Start/End: Original strand, 11435554 - 11435602
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    ||||||||||||||| ||||||||| ||||||||| |||||| ||||||    
T  11435554 tatttataagaaaatgtcacaacttataaggtataattattgtttaaaa 11435602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11590499 - 11590411
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||||| |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||| | |||| ||| |||||    
T  11590499 cggcttgtgaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggactcgggtttctcctaataa 11590411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 15391806 - 15391754
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    ||||||||||||| |||||  |||||||||| ||||||||||||||| |||||    
T  15391806 cctcctctttatatacttttctcaagagtcttatctatccgatgtgggacttg 15391754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 29413416 - 29413340
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  ||||||||||||||||| | ||||||||||| ||||| |||| || | ||||| |||||||| ||||    
T  29413416 gtgaggagtgcctcctctttataaactcttatcaagagtcttatctacccgaagtaggacttgggtttttcccaata 29413340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 43361577 - 43361661
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| ||||| ||||    
T  43361577 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttcccaa 43361661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 2697356 - 2697423
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||| | ||||||||  ||||||||||||||||| |  |||||||||  |||||||||||||||    
T  2697356 cggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgg 2697423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2997286 - 2997373
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||| ||| |||||||   |||| |||||||| ||| |  |||||||||| ||||||||||||||| | |||||||||||| ||||    
T  2997286 cggcttatgaggtgaggattgcctcatctttatatactcttctcaagagtcttatctatccgatgtgggatttgagtttttcctaata 2997373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29273250 - 29273337
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||| ||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  29273250 cggcttgtaaggtgaggattgcctcccctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 29273337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 33342324 - 33342387
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    ||||||||||||| ||| |  |||||||||||||||||| ||||||| ||||| ||||| ||||    
T  33342324 cctcctctttatatactcttctcaagagtctcatctatctgatgtgggacttgggttttcccaa 33342387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 4022151 - 4022217
Alignment:
Q  2 ggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||| | ||||||||  ||||||||||||||||| |  |||||||||  |||||||||||||||    
T  4022151 ggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtgg 4022217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 10017376 - 10017426
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    ||||||||||||||| | ||||||||||| ||||||| ||||||| |||||    
T  10017376 tcctctttataaactcttatcaagagtcttatctatctgatgtggcacttg 10017426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 20429022 - 20429072
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    ||||||||||||||| | ||||||||||| || |||||||||||| |||||    
T  20429022 tcctctttataaactattatcaagagtcttatgtatccgatgtgggacttg 20429072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 22826792 - 22826850
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    ||||||| |||||||| | ||||||||||| ||||||||||||||| || || ||||||    
T  22826792 ctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttt 22826850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 38870985 - 38871047
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    ||||||||  ||||| ||||||||||||| ||||||||||| ||| ||| ||||||| |||||    
T  38870985 gtgaggagtgcctccactttataaacttttatcaagagtcttatcgatctgatgtgggacttg 38871047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 39648924 - 39648989
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| |  |||||||||| |||||| |||||||| ||||| |||||||| ||||    
T  39648924 cctcctctttataaactcttctcaagagtcttatctat-cgatgtgggacttgggtttttcccaata 39648989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 43423357 - 43423291
Alignment:
Q  2 ggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||| | ||||||||  ||||||||||||||||| |  |||||||| | |||||||||||||||    
T  43423357 ggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtgttatctatccgatgtgg 43423291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 47377873 - 47377827
Alignment:
Q  42 atcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||| ||||||||||||||| || ||||||||||| ||||    
T  47377873 atcaagagtcttatctatccgatgtgggacatgagtttttcccaata 47377827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 49142735 - 49142674
Alignment:
Q  26 ctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||| ||||||| ||||| |||||||| |||||| ||||| |||||||| ||||    
T  49142735 ctctttataaactatcatcaa-agtcttatctatccaatgtgggacttgggtttttcccaata 49142674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 52921513 - 52921579
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||| |||||||||| ||| |||||||   ||||||||||||||| ||||| |||||||| ||||    
T  52921513 cctcctttttataaactctcaccaagagtactatctatccgatgtgggacttgggtttttcccaata 52921579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 13959458 - 13959393
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||||||||||||| |  |||||||||| ||||||||||||||  ||||| ||| |||| |||||    
T  13959458 tcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgcgttattcccaataa 13959393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 15391877 - 15391828
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaac 71  Q
    ||||||||||||| ||| |  |||||||||| ||||||||||||||||||    
T  15391877 cctcctctttatatactcttctcaagagtcttatctatccgatgtggaac 15391828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 24547398 - 24547467
Alignment:
Q  328 aagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttatt 397  Q
    |||||||| ||||||||  | |||| || ||||||||||||||| |||||| ||||||| | ||||||||    
T  24547398 aagaaaattttcaaaaatttttttgatcctatttataagaaaatgtcacaagttttaagatgtagttatt 24547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 388
Target Start/End: Original strand, 32715648 - 32715725
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggt 388  Q
    |||||| ||||||||| || ||||| ||  |||||  |||||||| ||||||||||||||  |||||| |||||||||    
T  32715648 cctccggtcctatatataacaaaattttttaaaaaaaatttggtcctatttataagaaaaagtcacaaattttaaggt 32715725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 43361805 - 43361866
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    ||||||||||||||| |  ||||||||||  |||||||||||||| ||||| ||||| ||||    
T  43361805 tcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttcccaa 43361866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 45982238 - 45982174
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| ||||||||| | ||||||| || || | ||||| |||||||| ||||    
T  45982238 tcctctttataaacttttatcaagagttttatctatctgacgttggacttgggtttttcccaata 45982174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 405
Target Start/End: Original strand, 46443703 - 46443751
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    ||||||||||||||  |||||||||||||||| || ||||| |||||||    
T  46443703 tatttataagaaaacgtcacaacttttaaggtgtaattattacttaaaa 46443751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 48558369 - 48558433
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||| ||| |  |||||||||| ||||||||||| ||| ||||| |||||||| ||||    
T  48558369 tcctctttatatactcttctcaagagtcttatctatccgatatgggacttgggtttttcccaata 48558433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11316922 - 11316835
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11316922 cggcttgtgaagtgaggagtgccccctctttataaactctcatcaagagtctcatctatccgatgtggaacttgagtttttcccaata 11316835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11317127 - 11317040
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||||||  || |||||||||||||| ||||||||||| ||||||||||||||||| ||||| |||||||| ||||    
T  11317127 cggcttgtgaagtgaggagtgccccctctttataaactctcatcaagagtttcatctatccgatgtgggacttgggtttttcccaata 11317040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 30526915 - 30526845
Alignment:
Q  3 gcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaactt 73  Q
    ||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  30526915 gcttgtgaagtgaggagttccccctctttataaactctcatcaagagtctcatctatccgatgtgggactt 30526845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 15102654 - 15102737
Alignment:
Q  5 ttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||||  ||||||| ||||| |||||||| ||||    
T  15102654 ttgtgaagtgaggagtgcctcctctttataaactctcatcaagagtctcatctatttgatgtgggacttgggtttttcccaata 15102737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 318 - 406
Target Start/End: Original strand, 180302 - 180390
Alignment:
Q  318 tcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||| ||| |||||||| ||||||||| |  |||||| |||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  180302 tcctaaatataagaaaattttcaaaaaatttgttggtcctatttataagaaaatatcacaatttttaagatgtagttattgcttaaaag 180390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 15102781 - 15102863
Alignment:
Q  5 ttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||   |||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |||||||| ||||    
T  15102781 ttgtgaagtgaggagtgactcctctttataaactctcatcaagagtctcatctatctgatgtgg-acttgggtttttcccaata 15102863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 26394609 - 26394543
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| |||||||| | ||||||||||| |||||||||||||||||| ||||||||||| ||||    
T  26394609 cctcctctatataaactcttatcaagagtcttatctatccgatgtggaacatgagtttttcccaata 26394543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 406
Target Start/End: Original strand, 19780186 - 19780281
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||| ||||||| |||||||| |||||||||  |||||||| ||| ||||||||||  |  ||||||||||| |||| |||||| |||||||    
T  19780186 cctccgattctatatataagaaaattttcaaaaaaaaatttggtcctatatataagaaaaagtttcaacttttaagatatatttattgtttaaaag 19780281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 405
Target Start/End: Complemental strand, 606793 - 606716
Alignment:
Q  328 aagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    |||||||| |||||||   | ||||||| ||||||||||||||| |||||||||||||||| || |||| ||||||||    
T  606793 aagaaaattttcaaaattttttttggtcctatttataagaaaatgtcacaacttttaaggtgtacttatagcttaaaa 606716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 25998874 - 25998809
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| | |||| |||||| ||||||||||||||| ||||| |||||||| ||||    
T  25998874 ctcctctttataaactattatcatgagtcttatctatccgatgtgggacttgggtttttcccaata 25998809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 26098399 - 26098334
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| | |||| |||||| ||||||||||||||| ||||| |||||||| ||||    
T  26098399 ctcctctttataaactattatcatgagtcttatctatccgatgtgggacttgggtttttcccaata 26098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 29742461 - 29742546
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   |||||||||||||||||||||||||||||||  |  ||||||||||| |||| ||||||||| ||||    
T  29742461 cggcttgtaaggtgaggattgcctcctctttataaactttcatcaagagtct--taaatccgatgtgggacttaagtttttcctaata 29742546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10418363 - 10418430
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||| | ||||||||  ||||||||||||||||| |||||||||||   |||||||||||||||    
T  10418363 cggcttgtaaggtgaggagtgcctcctctttataaactctcatcaagagtgctatctatccgatgtgg 10418430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16877035 - 16877122
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  16877035 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16877122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28149872 - 28149785
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| | ||||||||| | ||||||||||||||| || || |||||||| ||||    
T  28149872 cggcttgtaaggtgaggattgcctcctctttataaactcttatcaagagttttatctatccgatgtgggacatgggtttttcccaata 28149785  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 25999080 - 25999015
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| | |||| |||||| ||| ||||||||||| ||||| |||||||| ||||    
T  25999080 ctcctctttataaactattatcatgagtcttatcaatccgatgtgggacttgggtttttcccaata 25999015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 385
Target Start/End: Original strand, 7926799 - 7926834
Alignment:
Q  350 ttggtcttatttataagaaaatatcacaacttttaa 385  Q
    |||||| |||||||||||||||||||||||||||||    
T  7926799 ttggtcatatttataagaaaatatcacaacttttaa 7926834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 15101136 - 15101223
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| |||||  ||||||| ||||    
T  15101136 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttggatttttcccaata 15101223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16590263 - 16590176
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| |||||||||   ||||||||||||||| | |   |||||||||  |||||||||||||| ||||| |||||||| ||||    
T  16590263 cggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16590176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16605117 - 16605204
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| |||||||||   ||||||||||||||| | |   |||||||||  |||||||||||||| ||||| |||||||| ||||    
T  16605117 cggcttgtaaagtgaggattgcctcctctttataaattcttcccaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16605204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 359 - 406
Target Start/End: Original strand, 28363787 - 28363834
Alignment:
Q  359 tttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||||  ||||| |||||||||||||||||||| |||||||    
T  28363787 tttataagaaaacgtcacatcttttaaggtatagttattgattaaaag 28363834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 30539472 - 30539417
Alignment:
Q  28 ctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||||| | ||||| ||||| ||||||||||||||| ||||| ||||||||    
T  30539472 ctttataaactcttatcaaaagtcttatctatccgatgtgggacttgggtttttcc 30539417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 6623492 - 6623538
Alignment:
Q  43 tcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||||| ||||||||||||||| ||||| |||||||| |||||    
T  6623492 tcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 6623538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 11313428 - 11313494
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||| ||| |  |||||||||| ||||||||||||||| | ||| |||||||| ||||    
T  11313428 cctcctctttatatactcttctcaagagtcttatctatccgatgtgggatttgggtttttcccaata 11313494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 19712450 - 19712516
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||| ||||||||| |  |||||||||| |||||||||||||||||| ||  ||||||| ||||    
T  19712450 cctcctccttataaactattctcaagagtcttatctatccgatgtggaacatggatttttcccaata 19712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 30527082 - 30527044
Alignment:
Q  40 tcatcaagagtctcatctatccgatgtggaacttgagtt 78  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  30527082 tcatcaagagtttcatctatccgatgtgggacttgagtt 30527044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 31910 - 31963
Alignment:
Q  13 tgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgt 66  Q
    |||||||  |||| |||||||||||| | ||||||||||| |||||||||||||    
T  31910 tgaggagtgcctcgtctttataaactcttatcaagagtcttatctatccgatgt 31963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 405
Target Start/End: Original strand, 3611554 - 3611610
Alignment:
Q  348 atttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    ||||| || ||||||||||||||| | |||||||| ||||||||||||||| ||||||    
T  3611554 atttgatcctatttataagaaaatgttacaacttt-aaggtatagttattgtttaaaa 3611610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 15293926 - 15293987
Alignment:
Q  28 ctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||||||||| ||||||||| ||| ||||||| |||| |  |||||||||||||| |||||    
T  15293926 ctttataaactctcatcaagaatctaatctatctgatgcgagacttgagtttttcccaataa 15293987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 19291965 - 19292030
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||| || ||||| | ||||||||||| ||||||||||||||| ||||  |||||| ||||||    
T  19291965 ctcctctatacaaactcttatcaagagtcttatctatccgatgtgggactttggtttttgcaaata 19292030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 26098811 - 26098746
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| | |||| |||||| ||| ||||||||| | ||||| |||||||| ||||    
T  26098811 ctcctctttataaactattatcatgagtcttatcaatccgatgtaggacttgggtttttcccaata 26098746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 8929901 - 8929845
Alignment:
Q  25 cctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||||||||| ||||||  ||||| |||||||||| |||||| ||| ||||||    
T  8929901 cctctttataaactctcatcataagtcttatctatccgacgtggaatttgtgttttt 8929845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 30539287 - 30539247
Alignment:
Q  28 ctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||||||| | ||||||||||| |||||||||||||||    
T  30539287 ctttataaactcttatcaagagtcttatctatccgatgtgg 30539247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 34029554 - 34029602
Alignment:
Q  245 ttttgcagttcgggatgctgattcaatacctctttgacaaatttccaaa 293  Q
    |||||||||| |||||||||||  ||||||| ||||| |||||||||||    
T  34029554 ttttgcagtttgggatgctgatcgaatacctttttgaaaaatttccaaa 34029602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 5e-26; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 310 - 406
Target Start/End: Original strand, 36054770 - 36054866
Alignment:
Q  310 tcctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||||||||| |||||||| ||||||| | | ||||||| ||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  36054770 tcctccgatcctatatataagaaaattttcaaaataatttttggtcctatttataagaaaatgtcacaacttttaaggtatatttattgtttaaaag 36054866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 322 - 406
Target Start/End: Original strand, 8251202 - 8251286
Alignment:
Q  322 atatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||| |||||||| || |||||| ||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  8251202 atatataagaaaattttaaaaaaaatatttggtcctatttataagaaaatatcacaacttttaaggtgtaattattgcttaaaag 8251286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30176489 - 30176577
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||||| |||| |||  ||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||| |||||    
T  30176489 cggcttgtgaggtgaagagtgcctcctctttataaactctcatcaagagtctcgtctatccgatgtgggacttgagtttttcccaataa 30176577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 5496638 - 5496560
Alignment:
Q  3 gcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    ||||||||||| |||||  |||||||||||||||||||||||||||||||| |||||  ||||||| ||||||||||||    
T  5496638 gcttgtgaagtaaggagtgcctcctctttataaactttcatcaagagtctcgtctatttgatgtgggacttgagttttt 5496560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 30117484 - 30117544
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcca 84  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||    
T  30117484 tcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcca 30117544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36037269 - 36037202
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||||| ||||||||  | ||||||||||||||| |||||||||||||||||||||||||||||    
T  36037269 cggcttgtgaggtgaggagtgcatcctctttataaactctcatcaagagtctcatctatccgatgtgg 36037202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 43599390 - 43599303
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||| |||||||||||||| ||||    
T  43599390 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgagtttttcccaata 43599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 26122792 - 26122846
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtt 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  26122792 tcctctttataaactctcatcaagagtctcatctatccgatgtgggacttaagtt 26122846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36039819 - 36039885
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtg 67  Q
    |||||||||| ||||| ||  | ||||||||||||||| ||||||||||||||||||||||||||||    
T  36039819 cggcttgtgaggtgagtagtgcatcctctttataaactctcatcaagagtctcatctatccgatgtg 36039885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 311 - 406
Target Start/End: Complemental strand, 38209710 - 38209617
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| ||||||||| |||||||| |  ||||||  |||||||| ||||||||||||||  ||||||||||||||||| | |||||| |||||||    
T  38209710 cctccggtcctatatataagaaaatttaaaaaaaa--atttggtcatatttataagaaaaagtcacaacttttaaggtacatttattgtttaaaag 38209617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 12941628 - 12941561
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||| |||||||||| |||||| |||||||||||||| ||||||| ||||| |||||||| |||||    
T  12941628 cctcctttttataaactctcatcatgagtctcatctatctgatgtggtacttgggtttttcccaataa 12941561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 30112578 - 30112523
Alignment:
Q  351 tggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||| ||||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  30112578 tggtcctatttataagaaaatgtcacaaattttaaggtgtagttattgcttaaaag 30112523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40902418 - 40902505
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||||||||| |||||||| ||||    
T  40902418 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtggaacttgggtttttcccaata 40902505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 361 - 407
Target Start/End: Complemental strand, 30654305 - 30654259
Alignment:
Q  361 tataagaaaatatcacaacttttaaggtatagttattgcttaaaagt 407  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  30654305 tataagaaaatatcacaacttttaaagtgtagttattgcttaaaagt 30654259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 350 - 395
Target Start/End: Complemental strand, 16890425 - 16890380
Alignment:
Q  350 ttggtcttatttataagaaaatatcacaacttttaaggtatagtta 395  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  16890425 ttggtcctatttatatgaaaatatcacaacttttaaggtatagtta 16890380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 31658854 - 31658903
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||||||||||||||||||| | ||||||||| |||||||    
T  31658854 tatttataagaaaatatcacaacttttaagatgtagttattgtttaaaag 31658903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 40694233 - 40694282
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||||||||||||||||||| |||| || ||||||||||||||    
T  40694233 tatttataagaaaatatcacaactttttaggtgtaattattgcttaaaag 40694282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 8559660 - 8559572
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| | |||||||   ||||||||||||| ||| |  |||||||||| ||||||||||||||| ||||| |||||||| |||||    
T  8559660 cggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 8559572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 18313842 - 18313775
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| |||||||||| | ||||||||| ||||||||||||||| |||||  ||||||| |||||    
T  18313842 cctcctctatataaacttttaacaagagtcttatctatccgatgtgggacttggatttttcccaataa 18313775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 5720913 - 5720979
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| |  |||||||||| ||||||||||||||| |||||  ||||||| ||||    
T  5720913 cctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 5720979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 25186829 - 25186779
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaactt 73  Q
    ||||||| |||||||||| ||||||||||| ||||||||||||||| ||||    
T  25186829 ctcctctatataaacttttatcaagagtcttatctatccgatgtgggactt 25186779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 404
Target Start/End: Original strand, 1445349 - 1445402
Alignment:
Q  352 ggtcttatttataagaaaatatcacaacttttaaggtat-agttattgcttaaa 404  Q
    |||| ||||||||||||||| |||||||||||||||| | ||||||||||||||    
T  1445349 ggtcctatttataagaaaatgtcacaacttttaaggtgtaagttattgcttaaa 1445402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 15857216 - 15857171
Alignment:
Q  43 tcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||    
T  15857216 tcaagagtcttatctatccgatgtgggacttgagtttttcccaata 15857171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 33435932 - 33435875
Alignment:
Q  31 tataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | ||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  33435932 tataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 33435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 35561724 - 35561663
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||||||||||| |  |||||| ||| ||||||||||||||| ||||| ||||||||    
T  35561724 cctcctctttataaactcttctcaagaatcttatctatccgatgtgggacttgggtttttcc 35561663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 43901064 - 43901129
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||| |||||||| | ||||||||||| ||||||||||||||| || || |||||||| ||||    
T  43901064 ctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 43901129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10989266 - 10989346
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| ||||||    
T  10989266 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttt 10989346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 15011054 - 15011134
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| ||||||    
T  15011054 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggttttt 15011134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 90
Target Start/End: Original strand, 20760706 - 20760774
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataac 90  Q
    |||| |||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||||    
T  20760706 cctcatctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataac 20760774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34248156 - 34248089
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||| | ||||||||  ||||||||||||||||| | ||||||||||  ||||| |||||||||    
T  34248156 cggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgg 34248089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 30066029 - 30065983
Alignment:
Q  42 atcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| ||||    
T  30066029 atcaagagtcttatctatctgatgtgggacttgagtttttcccaata 30065983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 33435728 - 33435670
Alignment:
Q  31 tataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| | ||||||||| | ||||||||||||||  |||||||||||||| |||||    
T  33435728 tataaactcttatcaagagttttatctatccgatgtgagacttgagtttttcccaataa 33435670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 35431579 - 35431633
Alignment:
Q  350 ttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaa 404  Q
    |||||| ||||||||||||||| |||||||||||||  |||||| |||| |||||    
T  35431579 ttggtcctatttataagaaaatgtcacaacttttaaattatagtcattgtttaaa 35431633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 43594553 - 43594503
Alignment:
Q  355 cttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    ||||||||||||||||| ||||| ||||| | ||||||||||||| |||||    
T  43594553 cttatttataagaaaatgtcacatctttttaagtatagttattgcataaaa 43594503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 2520277 - 2520232
Alignment:
Q  358 atttataagaaaatatcacaacttttaaggtatagttattgcttaa 403  Q
    |||||||||||||| |||||| ||||||| | ||||||||||||||    
T  2520277 atttataagaaaatgtcacaaattttaagatgtagttattgcttaa 2520232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 8559745 - 8559790
Alignment:
Q  43 tcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  8559745 tcaagagtcttatctatccgatgtgggacttgggtttttcccaata 8559790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 40696703 - 40696654
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||||||||||||||||||| || | || ||||| ||||||||    
T  40696703 tatttataagaaaatatcacaactttttagatgtaattattccttaaaag 40696654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 8056283 - 8056343
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttc 82  Q
    |||||||| |||||||| | ||||||||||| |||| |||||||||| || || |||||||    
T  8056283 cctcctctatataaactcttatcaagagtcttatctttccgatgtgggacatgggtttttc 8056343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 42228850 - 42228778
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaactt 73  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||    
T  42228850 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggactt 42228778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 40703887 - 40703972
Alignment:
Q  4 cttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||||| ||||||||   |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  40703887 cttgtgaggtgaggagtgtctcctctttataaactctcatcaagagtctcatctatccgatgtgggacttgagcttttccaaataa 40703972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 5775959 - 5775873
Alignment:
Q  3 gcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||| ||||||||||  ||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||||| |||||    
T  5775959 gcttgtaaagtgaggagtgcctcctctttataaactctcattaagagtctcatctatgcgatgtgggacttgagtttttcccaataa 5775873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6751734 - 6751822
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||||| ||||||||  |||||||||| |||||| ||||||||| ||||||||||||||||||| ||||| |||||||| |||||    
T  6751734 cggcttgtgaggtgaggagtgcctcctctttgtaaactctcatcaagaatctcatctatccgatgtgggacttgggtttttcccaataa 6751822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6751530 - 6751617
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||| ||||||||  |||||||||| |||||| ||||||||||||||||||||||||| ||| ||||| |||||||| ||||    
T  6751530 cggcttgtgaggtgaggagtgcctcctctttgtaaactctcatcaagagtctcatctatccgatttgggacttgggtttttcccaata 6751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 6813103 - 6813185
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||||  |||||||  ||||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||||||    
T  6813103 cggcttgtgagttgaggagtgcctcctctttataaactctcatcaagagtcccatctatccgatgtgggacttgtgtttttcc 6813185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 406
Target Start/End: Original strand, 41508064 - 41508150
Alignment:
Q  320 ctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||| || ||||| |||||||||  |||||||| ||  |||||||||||||||||| ||||||||| |||||||||||||||||    
T  41508064 ctatatataataaaattttcaaaaaaaaatttggtcctaaatataagaaaatatcacaatttttaaggtgtagttattgcttaaaag 41508150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6813308 - 6813395
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||| ||||||||  ||||||||||||||||| |||||||||||| |||||||| |||| || ||||| | |||||| ||||    
T  6813308 cggcttgtgaggtgaggagtgcctcctctttataaactctcatcaagagtcccatctatctgatgcgggacttggggttttcccaata 6813395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 258506 - 258444
Alignment:
Q  3 gcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatg 65  Q
    |||||||||||||||||  ||||||||| || |||| ||||||||||||||||||||||||||    
T  258506 gcttgtgaagtgaggagtgcctcctcttcatcaactctcatcaagagtctcatctatccgatg 258444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 9379058 - 9378992
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| |  |||||||||| ||||||||||||||||||||| |||||||| ||||    
T  9379058 cctcctctttataaactcttctcaagagtcttatctatccgatgtggaacttgggtttttcccaata 9378992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 13310454 - 13310531
Alignment:
Q  5 ttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttc 82  Q
    |||||||||||||||   |||||||||||||||| || |||||||||||||||||| || |||| ||||| |||||||    
T  13310454 ttgtgaagtgaggagtgtctcctctttataaactctcgtcaagagtctcatctatctgacgtgggacttgggtttttc 13310531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 406
Target Start/End: Original strand, 46341502 - 46341547
Alignment:
Q  361 tataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  46341502 tataagaaaatatcacaacttttaaggtgtagttattgcttaaaag 46341547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 16565166 - 16565090
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  |||||| |||||||||| | ||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  16565166 gtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16565090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 16600496 - 16600572
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  |||||| |||||||||| | ||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  16600496 gtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 383
Target Start/End: Complemental strand, 6549277 - 6549222
Alignment:
Q  328 aagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaactttt 383  Q
    |||||||| |||||||||  |||||||| |||||||||||||||||||||||||||    
T  6549277 aagaaaattttcaaaaaaaaatttggtcctatttataagaaaatatcacaactttt 6549222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 10903530 - 10903596
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| |||||||| | ||||||||||| ||||||||||||||| || ||||||||||| ||||    
T  10903530 cctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgagtttttcccaata 10903596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 23821722 - 23821788
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| ||||||| ||||| || ||||||||||| |||||| |||||||| ||||    
T  23821722 cctcctctttataaactgtcatcaaaagtcttatttatccgatgtgaaacttgggtttttcccaata 23821788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 33855748 - 33855683
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| | |||| |||||| ||||||||||||||| ||||| |||||||| ||||    
T  33855748 ctcctctttataaactattatcatgagtcttatctatccgatgtgggacttgggtttttcccaata 33855683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 40703677 - 40703750
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    |||||||||| ||||||||   |||||||||||||| | |||||||||||||||| ||| |||||||| |||||    
T  40703677 cggcttgtgaggtgaggagtgtctcctctttataaagtctcatcaagagtctcatttattcgatgtgggacttg 40703750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 4258240 - 4258316
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  |||||| ||  |||||| | ||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  4258240 gtgaggagtgcctcctattggtaaactcttatcaagagtcttatctatccgatgtgggacttgagtttttcccaata 4258316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6782905 - 6782817
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||  ||||| |||||||| |||||    
T  6782905 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaataa 6782817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 16564962 - 16564886
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  |||||| |||||||||| | || |||||||| ||||||||||||||| ||||| |||||||| ||||    
T  16564962 gtgaggagtgcctcctatttataaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16564886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 16600700 - 16600776
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  |||||| |||||||||| | || |||||||| ||||||||||||||| ||||| |||||||| ||||    
T  16600700 gtgaggagtgcctcctatttataaactcttattaagagtcttatctatccgatgtgggacttgggtttttcccaata 16600776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 354 - 406
Target Start/End: Original strand, 37048573 - 37048625
Alignment:
Q  354 tcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||||||||||||||||||||| || |||| |||| |||||||    
T  37048573 tcttatttataagaaaatatcacaacttttaaagtgtagtgattgtttaaaag 37048625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 48114053 - 48113989
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||| ||||| ||| |||| ||||    
T  48114053 tcctctttataaactcttatcaagagtcttatctatccgatgtgggacttgggttattcccaata 48113989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 406
Target Start/End: Complemental strand, 6549206 - 6549167
Alignment:
Q  367 aaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  6549206 aaaatatcacaacttttaaggtatagttatttcttaaaag 6549167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 6783117 - 6783030
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||  ||||| |||||||| ||||    
T  6783117 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 6783030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 359 - 402
Target Start/End: Complemental strand, 9183382 - 9183339
Alignment:
Q  359 tttataagaaaatatcacaacttttaaggtatagttattgctta 402  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||    
T  9183382 tttataagaaaatgtcacatcttttaaggtatagttattgctta 9183339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 9378851 - 9378784
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||||||||||||||| |  |||||||||| |||||| |||||||| ||||| |||||||| |||||    
T  9378851 cctcctctttataaactcttctcaagagtcttatctattcgatgtgggacttgggtttttcccaataa 9378784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 12506663 - 12506750
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattg 398  Q
    |||||| ||||||||| |||||||| ||||||||    | ||||| ||  ||||||||||||| |||||||||||||| |||||||||    
T  12506663 cctccggtcctatatataagaaaattttcaaaaataattctggtcctaaatataagaaaatattacaacttttaaggtgtagttattg 12506750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 404
Target Start/End: Original strand, 20949074 - 20949121
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaa 404  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||||    
T  20949074 tatttataagaaaatgtcataacttttaaggtgtagttattgcttaaa 20949121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29252655 - 29252568
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| |||||||||| |||| ||||| |||||||| ||||    
T  29252655 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgacgtgggacttgggtttttcccaata 29252568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 35866688 - 35866751
Alignment:
Q  25 cctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||| |||||||| | ||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  35866688 cctctatataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 35866751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 39808643 - 39808710
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| |||||    
T  39808643 cctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataa 39808710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 47856037 - 47856100
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||||| | ||| ||||| ||||    
T  47856037 cctcctctttataaactcttatcaagagtcttatctatccgatgtgggatttgggttttcccaa 47856100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 2179712 - 2179646
Alignment:
Q  23 ctcctctttataaact-ttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| ||  |||||||||| ||||||||||||||| |||||| ||||||| ||||    
T  2179712 ctcctctttataaactctttctcaagagtcttatctatccgatgtgggacttgaatttttcccaata 2179646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 10903323 - 10903389
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| |||||||| | ||||||||||| ||||||||||||||| || || |||||||| ||||    
T  10903323 cctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgtgtttttcccaata 10903389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 406
Target Start/End: Original strand, 2195810 - 2195855
Alignment:
Q  361 tataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||    
T  2195810 tataagaaaatatcataacttttaaggtgtagttattgtttaaaag 2195855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 30768475 - 30768410
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||| |||||| | | ||||||||||| ||||||||||||||| || ||||||||||| ||||    
T  30768475 ctcctctatataaattattatcaagagtcttatctatccgatgtgggacatgagtttttcctaata 30768410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 31357722 - 31357787
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||| |||||||| | ||||||||||| ||||||||||||||| || || |||||||| ||||    
T  31357722 ctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 31357787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 33855538 - 33855473
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| | |||| |||||| ||||||||||| ||| ||||| |||||||| ||||    
T  33855538 ctcctctttataaactattatcacgagtcttatctatccgatatgggacttgggtttttcccaata 33855473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 4258036 - 4258112
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  |||||| || ||||||| | ||||||||||| ||||||||||||||  ||||| |||||||| ||||    
T  4258036 gtgaggagtgcctcctattgataaactcttatcaagagtcttatctatccgatgtgagacttgggtttttcccaata 4258112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 406
Target Start/End: Complemental strand, 17757561 - 17757509
Alignment:
Q  354 tcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||||||   |||||||||||||||| | ||||||||||||||    
T  17757561 tcttatttataagaaaaagacacaacttttaaggtacatttattgcttaaaag 17757509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 23390646 - 23390582
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||| |||||||| | ||||||||||| ||||||||||||||| || || |||||||| ||||    
T  23390646 tcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaata 23390582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 353 - 401
Target Start/End: Complemental strand, 40017028 - 40016980
Alignment:
Q  353 gtcttatttataagaaaatatcacaacttttaaggtatagttattgctt 401  Q
    |||||| |||||||||||||| ||||||||||| || ||||||||||||    
T  40017028 gtcttaattataagaaaatataacaacttttaaagtgtagttattgctt 40016980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 46101366 - 46101310
Alignment:
Q  350 ttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||||||||||| ||| |||||||||| | |||||||| || |||||    
T  46101366 ttggtcttatttataagaaaatgtcataacttttaagttgtagttattactcaaaag 46101310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 81
Target Start/End: Complemental strand, 49040633 - 49040565
Alignment:
Q  13 tgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||| || ||||||| |||||||| | ||||||||||| ||||||||||||||  || |||||||||    
T  49040633 tgaggatattctcctctatataaactcttatcaagagtcttatctatccgatgtgagacatgagttttt 49040565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1661216 - 1661283
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||| | ||||||||  ||||||||||||||||| |  |||||||| | |||||||||||||||    
T  1661216 cggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagttttatctatccgatgtgg 1661283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 398
Target Start/End: Original strand, 12485231 - 12485318
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattg 398  Q
    |||||| ||||||||| |||||||| ||||||||    | ||||| ||  ||||| ||||||| |||||||||||||| |||||||||    
T  12485231 cctccggtcctatatataagaaaattttcaaaaataattctggtcctaaatataataaaatattacaacttttaaggtgtagttattg 12485318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 21557069 - 21557006
Alignment:
Q  27 tctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataac 90  Q
    |||||||||||| | |||||||||   ||||||||||||||| |||||||||||| | ||||||    
T  21557069 tctttataaactcttatcaagagttctatctatccgatgtgggacttgagttttttccaataac 21557006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 36621077 - 36621019
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||||||| | ||||||||||||||||| |||||||||   ||||||||||||||    
T  36621077 tcctctttataaaatctcatcaagagtctcatc-atccgatgtaagacttgagtttttcc 36621019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 37272070 - 37272137
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||| | ||||||||  ||||||||||||||||| | ||||||||||  ||||| |||||||||    
T  37272070 cggcttgtaaggtgaggagtgcctcctctttataaactcttatcaagagtcctatctaaccgatgtgg 37272137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7135268 - 7135334
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtg 67  Q
    |||||||| | ||||||||  ||||||||||||||||| |  |||||||||  ||||||||||||||    
T  7135268 cggcttgtaaggtgaggagtgcctcctctttataaactcttctcaagagtcctatctatccgatgtg 7135334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 7307436 - 7307490
Alignment:
Q  352 ggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||| ||||||||||||||| ||||||||||||| |  ||||||||| |||||||    
T  7307436 ggtcatatttataagaaaatgtcacaacttttaaagagtagttattgtttaaaag 7307490  T

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Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 387
Target Start/End: Original strand, 17205122 - 17205160
Alignment:
Q  349 tttggtcttatttataagaaaatatcacaacttttaagg 387  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  17205122 tttggtcctatttataagaaaatgtcacaacttttaagg 17205160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 33834007 - 33833949
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    ||||||| |||||||| | ||||||||||| ||||||||||||||| || || ||||||    
T  33834007 ctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggttttt 33833949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 43366464 - 43366419
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||||||||||| |||||||||||||| || || ||||||||    
T  43366464 ctcctctttataaactctcatcaagagtctcgtcaattcgatgtgg 43366419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 406
Target Start/End: Complemental strand, 46572428 - 46572383
Alignment:
Q  362 ataagaaaatatcacaactttt-aaggtatagttattgcttaaaag 406  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||||    
T  46572428 ataagaaaatatcacatctttttaaggtatagttatttcttaaaag 46572383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 405
Target Start/End: Original strand, 508464 - 508512
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    |||||| |||||||| |||||| |||||||||  |||||||||||||||    
T  508464 tatttagaagaaaatttcacaatttttaaggtgaagttattgcttaaaa 508512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 2232175 - 2232111
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatg 65  Q
    |||||||||| |||||||   |||||||| |||||||| | ||||||||| | ||||||||||||    
T  2232175 cggcttgtgaggtgaggattgcctcctctatataaactcttatcaagagttttatctatccgatg 2232111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 8681942 - 8681890
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    |||| |||||||||||| | ||||||||||| ||||||| ||||||| |||||    
T  8681942 cctcttctttataaactcttatcaagagtcttatctatctgatgtgggacttg 8681890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36237881 - 36237793
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| | | ||||||  ||||||||||||||||| | ||||||||||  || ||||| |||||| ||||| || ||||| |||||    
T  36237881 cggcttgtaaggagaggagtgcctcctctttataaactcttatcaagagtcctatgtatccaatgtgggacttgggtgtttccgaataa 36237793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 406
Target Start/End: Original strand, 3269312 - 3269407
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| ||||||||| |||||||| ||||||||| | |||||||  | ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  3269312 cctccgttcctatatataagaaaattttcaaaaaaatctttggtccaaattataagaaaatatcacaacttttaaggtgtagttattgcctaaaag 3269407  T

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Target: chr2; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 406
Target Start/End: Original strand, 3269871 - 3269966
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| ||||||||| |||||||| ||||||||| | |||||||  | ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  3269871 cctccgttcctatatataagaaaattttcaaaaaaatctttggtccaaattataagaaaatatcacaacttttaaggtgtagttattgcctaaaag 3269966  T

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Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 318 - 406
Target Start/End: Original strand, 3268760 - 3268848
Alignment:
Q  318 tcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| || |||||||| ||||||||| | |||||||  | ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  3268760 tcctatgtataagaaaattttcaaaaaaatctttggtccaaattataagaaaatatcacaacttttaaggtgtagttattgcctaaaag 3268848  T

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Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 311 - 406
Target Start/End: Original strand, 38496428 - 38496523
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactat-ttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||||| |||||||| ||||||||| ||| || ||| ||||||||||||||| ||| || ||||||||||||||||||| |||||||    
T  38496428 cctccgatcctatatataagaaaattttcaaaaaa-tatgttagtcctatttataagaaaatgtcagaatttttaaggtatagttattgtttaaaag 38496523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 12419895 - 12419827
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataacc 91  Q
    |||||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||||| |||||||    
T  12419895 ctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataacc 12419827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 91
Target Start/End: Complemental strand, 12431955 - 12431887
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataacc 91  Q
    |||||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||||| |||||||    
T  12431955 ctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaataacc 12431887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 883626 - 883713
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  883626 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 883713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 884136 - 884049
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||| ||| |  |||||||||||||||||||||||||| ||||| |||||||| ||||    
T  884136 cggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtctcatctatccgatgtgggacttgggtttttcccaata 884049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 406
Target Start/End: Original strand, 19285835 - 19285930
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||   || |||||||| |||||||||  |||||||| |||||||||| || | |||||| ||||||||| |||||||||| ||||||    
T  19285835 cctccgatccttattataagaaaattttcaaaaaaaaatttggtcctatttataagtaattgtcacaagttttaaggtgtagttattgcataaaag 19285930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 3712004 - 3711936
Alignment:
Q  337 ttcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||  |||||||  ||||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  3712004 ttcaaaaaaaaatttggttctatttataagaaaatgtcacaacttttaagg-atagttattgtttaaaag 3711936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 19859983 - 19859915
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataac 90  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||||    
T  19859983 cctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataac 19859915  T

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Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20999014 - 20999102
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| |||||    
T  20999014 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaataa 20999102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 4721850 - 4721913
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    |||||||| |||||||| | ||||||||||| ||||||||||||||| || || ||||||||||    
T  4721850 cctcctctatataaactcttatcaagagtctaatctatccgatgtgggacatgggtttttccaa 4721913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17727483 - 17727396
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||| ||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  17727483 cggcttgtaaggtgaggattgccttctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 17727396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 39386728 - 39386661
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| |||||||| | ||||||||||| ||||||||||||||| || || |||||||| |||||    
T  39386728 cctcctctatataaactcttatcaagagtcttatctatccgatgtgggacatgggtttttcccaataa 39386661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 398
Target Start/End: Complemental strand, 44883312 - 44883269
Alignment:
Q  355 cttatttataagaaaatatcacaacttttaaggtatagttattg 398  Q
    |||||||||||||||||||||||| |||||||||||| ||||||    
T  44883312 cttatttataagaaaatatcacaatttttaaggtatatttattg 44883269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 1218927 - 1218985
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||||||||||| |  |||| ||| | ||||||||||||||||||||||||||||    
T  1218927 ctcctctttataaactcttctcaatagttttatctatccgatgtggaacttgagttttt 1218985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 6986462 - 6986528
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| |  |||||||||| ||||||||||||||| |||||  ||||||| ||||    
T  6986462 cctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttggatttttcccaata 6986528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 13839305 - 13839371
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||| |||||| ||||| |  ||||||||||  ||||||||||||| ||||||||||||||||||||    
T  13839305 cctcatctttagaaactcttctcaagagtcttgtctatccgatgtgaaacttgagtttttccaaata 13839371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 19860095 - 19860029
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  19860095 cctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 19860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 312 - 405
Target Start/End: Original strand, 40442674 - 40442767
Alignment:
Q  312 ctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    ||||| ||||||||| |||||| | ||||||    | |||| || ||||||||||||||| |||||||||||||||| || |||||| ||||||    
T  40442674 ctccggtcctatataaaagaaatttttcaaatttttttttgatcctatttataagaaaatgtcacaacttttaaggtgtaattattgtttaaaa 40442767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 40503868 - 40503924
Alignment:
Q  349 tttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    |||||||  |||||||||||||| |||||||||||||||| || |||||| ||||||    
T  40503868 tttggtcccatttataagaaaatgtcacaacttttaaggtgtaattattgtttaaaa 40503924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 3435532 - 3435591
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||| |||||||| |  |||||||||| ||||||||||||||| |||||| |||||    
T  3435532 cctcctctgtataaactcttctcaagagtcttatctatccgatgtgggacttgaattttt 3435591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16007056 - 16006969
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||| ||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  16007056 cggcttgtaaggtgaggattacctcctctttatatactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 16006969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 17265021 - 17265084
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    |||||||| |||||||||| | ||||||||| ||||||||||||||| || || ||||| ||||    
T  17265021 cctcctctatataaacttttaccaagagtcttatctatccgatgtgggacatgggttttcccaa 17265084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 33986000 - 33986087
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||| ||| |  |||||||||| ||||||||||||||| | ||| |||||||| ||||    
T  33986000 cggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgggagttgggtttttcccaata 33986087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34775436 - 34775349
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||| | |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  34775436 cggcttgtaaggtgaggattgcctcctctttataaattcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 34775349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 18901910 - 18901956
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||||||||||||| |  |||||||||| |||||||||||||||    
T  18901910 cctcctctttataaactcttttcaagagtcttatctatccgatgtgg 18901956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 27545162 - 27545208
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||||||||||||| |  |||||||||| |||||||||||||||    
T  27545162 cctcctctttataaactcttctcaagagtcttatctatccgatgtgg 27545208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 29695389 - 29695451
Alignment:
Q  26 ctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||| |  |||||||||| ||||||||||||||  ||||| |||||||| ||||    
T  29695389 ctctttataaactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 29695451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 32667241 - 32667175
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| |||||||| | ||||||||||| ||||||| ||||||| ||||  |||||||| ||||    
T  32667241 cctcctctatataaactcttatcaagagtcttatctatctgatgtgggacttcggtttttcccaata 32667175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 4772820 - 4772873
Alignment:
Q  28 ctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    ||||||||||| | ||||||||||  ||||||| |||||| |||||||||||||    
T  4772820 ctttataaactcttatcaagagtcatatctatctgatgtgaaacttgagttttt 4772873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 88
Target Start/End: Original strand, 8044581 - 8044658
Alignment:
Q  12 gtgaggagatcctcctcttt-ataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  |||||||||| ||||||| | ||||||||||| ||||||| |||| || ||||| |||||||| ||||    
T  8044581 gtgaggagtgcctcctcttttataaactcttatcaagagtcttatctatctgatgcgggacttgggtttttcccaata 8044658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 10542110 - 10542175
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| | |||||||||   |||||||  |||||| |||||||||||||| ||||    
T  10542110 ctcctctttataaactcttatcaagagttcaatctatctaatgtgggacttgagtttttcccaata 10542175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 26847292 - 26847349
Alignment:
Q  26 ctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||||||||||| | ||||||||||  |||||||| |||||| ||||| ||||||||    
T  26847292 ctctttataaactcttatcaagagtcctatctatccaatgtgggacttgggtttttcc 26847349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 406
Target Start/End: Original strand, 38214106 - 38214163
Alignment:
Q  349 tttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||  |||||||||||||  |||||||||||||||| || |||||| |||||||    
T  38214106 tttggtccaatttataagaaaaattcacaacttttaaggtgtatttattgtttaaaag 38214163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 74
Target Start/End: Complemental strand, 12432163 - 12432111
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    ||||||||||||||||| |  |||||| ||| ||||||||||||||| |||||    
T  12432163 cctcctctttataaactcttctcaagattcttatctatccgatgtgggacttg 12432111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 21734476 - 21734428
Alignment:
Q  20 atcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    ||||||||||||||| ||| |  |||||||||| |||||||||||||||    
T  21734476 atcctcctctttatatactcttctcaagagtcttatctatccgatgtgg 21734428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 25621333 - 25621397
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||| ||| |  |||||||||| ||||||||||||||  ||||| |||||||| ||||    
T  25621333 tcctctttatatactcttctcaagagtcttatctatccgatgtgagacttgggtttttcccaata 25621397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 406
Target Start/End: Complemental strand, 39063740 - 39063692
Alignment:
Q  358 atttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||  |||||||||||||||| || |||||| |||||||    
T  39063740 atttataagaaaaattcacaacttttaaggtgtatttattgtttaaaag 39063692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 7e-19; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 310 - 406
Target Start/End: Original strand, 18704953 - 18705049
Alignment:
Q  310 tcctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||| ||||| |||||||| ||||||||| | |||||||  | ||||||||||| |||| |||||||||||| |||||||| ||||||||    
T  18704953 tcctccgatccgatatataagaaaattttcaaaaaaatctttggtccaaattataagaaaacatcataacttttaaggtgtagttattacttaaaag 18705049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 3015667 - 3015728
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  3015667 cctcctctttatgaactctcatcaagagtctcatctatccgatgtgggacttgggtttttcc 3015728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 3015463 - 3015529
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||  |||| |||||||| ||||    
T  3015463 cctcctctttatgaactctcatcaagagtctcatctatccgatgtggggcttgggtttttcccaata 3015529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 406
Target Start/End: Original strand, 6688752 - 6688837
Alignment:
Q  321 tatatacaagaaaatattcaaaaaactatt-tggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| |||||||| ||||||||| |||| ||||| ||  |||||||||||||||||||||||||||| ||||||||| |||||||    
T  6688752 tatatataagaaaattttcaaaaaa-tattatggtcctaaatataagaaaatatcacaacttttaaggtgtagttattgtttaaaag 6688837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 18107506 - 18107590
Alignment:
Q  3 gcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||| |||||  | ||||||| ||||||| ||||||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  18107506 gcttgtgaagtaaggagtacatcctctt-ataaactctcatcaagagtcttatctatccgatgtgggacttgggtttttcccaata 18107590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 39268086 - 39268009
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||||||  |||||| |||||||||| | ||||||||||| ||||||||||||||| ||||| |||||||| |||||    
T  39268086 gtgaggagtgcctcctatttataaactcttatcaagagtcttatctatccgatgtgggacttgggtttttcccaataa 39268009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20720575 - 20720663
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| ||||||||||  |||||| |||| ||||| | ||||||| ||| ||||||| ||||||| |||||||||||||| |||||    
T  20720575 cggcttgtaaagtgaggagtgcctcctttttacaaactcttatcaagaatcttatctatctgatgtgggacttgagtttttcccaataa 20720663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 17135576 - 17135519
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttt 80  Q
    |||||||||||||||| | ||||||||||| || |||||||||||| |||||||||||    
T  17135576 ctcctctttataaactcttatcaagagtcttatttatccgatgtgggacttgagtttt 17135519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 38376788 - 38376723
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  38376788 ctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 38376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 43490303 - 43490368
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||||| ||||    
T  43490303 ctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttttcccaata 43490368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 406
Target Start/End: Complemental strand, 3629355 - 3629307
Alignment:
Q  358 atttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  3629355 atttataagaaaatgtcacaacttttaaggtgtagttattacttaaaag 3629307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 48129 - 48216
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  48129 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 48216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2908587 - 2908674
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  2908587 cggcttgtaaggtgaggattgcctcctctttataaactattctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 2908674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 3762964 - 3762897
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||||||||||||||| |  |||||||||| ||||||||||||||| || || |||||||| |||||    
T  3762964 cctcctctttataaactcttctcaagagtcttatctatccgatgtgggacatgggtttttcccaataa 3762897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 35527013 - 35527092
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttt 80  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||| ||||| |||||    
T  35527013 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggtttt 35527092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 36307970 - 36308027
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||||||||||| |  |||||||||| |||||||||||||||||||||| |||||    
T  36307970 ctcctctttataaactctt-tcaagagtcttatctatccgatgtggaacttgaattttt 36308027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 37781890 - 37781956
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||| ||| |  |||||||||| ||||||||||||||  |||||||||||||| ||||    
T  37781890 cctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttgagtttttcccaata 37781956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 10656555 - 10656506
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||||||||||| |||||||| | | |||||||||||||||||    
T  10656555 tatttataagaaaatatcaaaacttttatgatgtagttattgcttaaaag 10656506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 22732787 - 22732828
Alignment:
Q  26 ctctttataaactttcatcaagagtctcatctatccgatgtg 67  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  22732787 ctctttataaactctcatcaggagtctcatctatccgatgtg 22732828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 27193012 - 27193061
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||| |||| |||||||||||||| ||||||||||| |||||||    
T  27193012 tatttataaggaaatgtcacaacttttaagatatagttattgtttaaaag 27193061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 28358082 - 28358147
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  28358082 ctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 28358147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 30870933 - 30870994
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaa 85  Q
    ||||||||||||||| |  |||||| ||| ||||||||||||||||| ||| ||||||||||    
T  30870933 tcctctttataaactcttctcaagaatcttatctatccgatgtggaatttgggtttttccaa 30870994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 8812700 - 8812760
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttc 82  Q
    |||||||| |||||||| | || |||||||| || |||||||||||||| |||||||||||    
T  8812700 cctcctctatataaactcttattaagagtcttatttatccgatgtggaatttgagtttttc 8812760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 13413663 - 13413575
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||  ||||||| ||||| |||||||| |||||    
T  13413663 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatttgatgtgggacttgggtttttcccaataa 13413575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 34457359 - 34457295
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  34457359 tcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 34457295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 37656757 - 37656837
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||| | |||||||   ||||||||||||| ||| |  |||||||||| ||||||||||||||  ||||||||||||    
T  37656757 cggcttgtaaggtgaggattgcctcctctttatatactcttctcaagagtcttatctatccgatgtgagacttgagttttt 37656837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 39268294 - 39268218
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  |||||  |||||||||| | ||||||||| | ||||||||||||||| ||||| |||||||| ||||    
T  39268294 gtgaggagtgcctccaatttataaactcttatcaagagttttatctatccgatgtgggacttgggtttttcccaata 39268218  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 406
Target Start/End: Original strand, 73565 - 73616
Alignment:
Q  355 cttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||| |||||| ||| ||||||||| |||||||| |||||||||||||||||    
T  73565 cttaattataaaaaattatcacaacctttaaggtgtagttattgcttaaaag 73616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 18914415 - 18914481
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaataa 89  Q
    ||||| ||||||||||||  ||||||||||   ||||||||||||| ||||| |||||||| |||||    
T  18914415 ctcctttttataaacttttctcaagagtcttgactatccgatgtgggacttgggtttttcccaataa 18914481  T

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Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 21019936 - 21019982
Alignment:
Q  42 atcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||| || ||||||||||||||| ||||||||||| ||||    
T  21019936 atcaagagtcttatatatccgatgtggaacatgagtttttcccaata 21019982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 29008110 - 29008064
Alignment:
Q  42 atcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||| |||||||||||||||||| || |||||||| ||||    
T  29008110 atcaagagtcttatctatccgatgtggaacatgggtttttcccaata 29008064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 40961806 - 40961748
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||| ||||||||| | ||||| ||||| ||||||| ||| ||||||||||||||||    
T  40961806 ctcctcgttataaactcttatcaaaagtcttatctatctgatatggaacttgagttttt 40961748  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 43490513 - 43490575
Alignment:
Q  26 ctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||| |  ||||||||||  |||||||||||||| ||||| |||||||| ||||    
T  43490513 ctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcccaata 43490575  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 10516315 - 10516380
Alignment:
Q  24 tcctctttataaactttcatcaagagtctc-atctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||| ||||   ||||||||||  ||||||||||||||| |||||||||||||| ||||    
T  10516315 tcctctttatatacttctctcaagagtctttatctatccgatgtgggacttgagtttttcccaata 10516380  T

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Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 18914208 - 18914273
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||| ||||||||||||  ||||||||||   ||||||||||||| ||||| |||||||| ||||    
T  18914208 ctcctttttataaacttttctcaagagtcttgactatccgatgtgggacttgggtttttcccaata 18914273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 406
Target Start/End: Complemental strand, 19296300 - 19296255
Alignment:
Q  361 tataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||| ||||| ||||||||||||| || |||||||||||||||||    
T  19296300 tataaaaaaatgtcacaacttttaaagtgtagttattgcttaaaag 19296255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 43442044 - 43442092
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    ||||||||||||||| | ||| |||| |||||||||||||||||||||||    
T  43442044 tatttataagaaaattttacatcttt-aaggtatagttattgcttaaaag 43442092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1892115 - 1892175
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatcc 61  Q
    |||||||| | ||||||||  ||||||||||||||| | ||||||||||||  ||||||||    
T  1892115 cggcttgtaaggtgaggagggcctcctctttataaattctcatcaagagtcctatctatcc 1892175  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 1893844 - 1893780
Alignment:
Q  24 tcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||||||||| | ||||||||||  |||||||| || ||  |||||||||||||| ||||    
T  1893844 tcctctttataaactcttatcaagagtcgtatctatccaatatgagacttgagtttttcccaata 1893780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 387
Target Start/End: Complemental strand, 3257354 - 3257326
Alignment:
Q  359 tttataagaaaatatcacaacttttaagg 387  Q
    |||||||||||||||||||||||||||||    
T  3257354 tttataagaaaatatcacaacttttaagg 3257326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 17130017 - 17130096
Alignment:
Q  4 cttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||||||||||    ||||| |||||||||| ||||||||||     |||||||||||||| ||||| |||||||| ||||    
T  17130017 cttgtgaagtgaggaatgactcctatttataaactctcatcaagag-----tctatccgatgtgggacttgggtttttcccaata 17130096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 18107901 - 18107825
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    ||||||||  ||||||||||||||| | | ||||||||||| ||| || |||||||| | ||| |||||||| ||||    
T  18107901 gtgaggagtgcctcctctttataaattcttatcaagagtcttatcgattcgatgtgggaattgggtttttcccaata 18107825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 30329904 - 30329848
Alignment:
Q  12 gtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtgg 68  Q
    |||||||| |||||||||||||||||| |  |||||| ||  |||||||||||||||    
T  30329904 gtgaggagttcctcctctttataaactcttctcaagaatcctatctatccgatgtgg 30329848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 30592485 - 30592441
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtg 67  Q
    |||||||||||| |||||  |||||||||| ||||||||||||||    
T  30592485 ctcctctttatatacttttctcaagagtcttatctatccgatgtg 30592441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 32501268 - 32501208
Alignment:
Q  23 ctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    ||||| |||| ||||| | ||||||||||| ||||||||||||||| |||||  |||||||    
T  32501268 ctcctttttacaaactcttatcaagagtcttatctatccgatgtgggacttggatttttcc 32501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 40169087 - 40169147
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttc 82  Q
    ||||||||||||| ||| |  |||||||||| ||||||| ||||||| ||||| |||||||    
T  40169087 cctcctctttatatactcttctcaagagtcttatctatctgatgtgggacttgggtttttc 40169147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0836 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 406
Target Start/End: Original strand, 3006 - 3072
Alignment:
Q  340 aaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| | ||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||||||    
T  3006 aaaaaagtttttggtcctatttataagaaaatgtcacaacttttaaggtgtagttattgtttaaaag 3072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 406
Target Start/End: Original strand, 154295 - 154390
Alignment:
Q  311 cctccgatcctatatacaagaaaatattcaaaaaactatttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| ||||||||| ||| |||| ||   |||| | ||||||  ||||||||||||||||| |||||||||||||| ||||||||| |||||||    
T  154295 cctccggtcctatatataaggaaatttttttaaaattttttggttctatttataagaaaatattacaacttttaaggtgtagttattgtttaaaag 154390  T

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Target: scaffold0989 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 2974 - 3054
Alignment:
Q  3 gcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttcc 83  Q
    |||||| |||||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| ||||| ||||||||    
T  2974 gcttgtaaagtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttgggtttttcc 3054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 76931 - 76851
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||| | |||||||   ||||||||||||||||| |  |||||||||| ||||||||||||||| ||||| ||||||    
T  76931 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttatctatccgatgtgggacttgggttttt 76851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13385 - 13298
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||||||| || ||||||||||| ||||    
T  13385 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacctgagtttttcccaata 13298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13592 - 13505
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagtttttccaaata 88  Q
    |||||||| | |||||||   ||||||||||||||||| |  ||||||||||  |||||||||| ||| ||||| |||||||| ||||    
T  13592 cggcttgtaaggtgaggattgcctcctctttataaactcttctcaagagtcttgtctatccgatttgggacttgggtttttcccaata 13505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 51274 - 51323
Alignment:
Q  357 tatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||||||| |||| |||||||||||||||| || ||||||||||||||    
T  51274 tatttataagtaaatgtcacaacttttaaggtgtatttattgcttaaaag 51323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 405
Target Start/End: Complemental strand, 38987 - 38931
Alignment:
Q  349 tttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaa 405  Q
    ||||||||||||||||||||||  |||||| ||||||| |||| |||||| ||||||    
T  38987 tttggtcttatttataagaaaaagtcacaatttttaagatatatttattgtttaaaa 38931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 13699 - 13736
Alignment:
Q  43 tcaagagtctcatctatccgatgtggaacttgagtttt 80  Q
    |||||||||||||||||||||||||  |||||||||||    
T  13699 tcaagagtctcatctatccgatgtgtgacttgagtttt 13736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 651 - 595
Alignment:
Q  350 ttggtcttatttataagaaaatatcacaacttttaaggtatagttattgcttaaaag 406  Q
    |||||| || |||||||||||  ||||||| |||||||| ||||||||| |||||||    
T  651 ttggtcctaattataagaaaaagtcacaacatttaaggtgtagttattgtttaaaag 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1138 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold1138
Description:

Target: scaffold1138; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 1898 - 1978
Alignment:
Q  1 cggcttgtgaagtgaggagatcctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttgagttttt 81  Q
    |||||||| | |||| |||  |||||||  |||||||| | ||||||||||| ||||||||||||||  ||||| ||||||    
T  1898 cggcttgtaaggtgaagagtgcctcctcggtataaactcttatcaagagtcttatctatccgatgtgagacttgggttttt 1978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 21309 - 21361
Alignment:
Q  22 cctcctctttataaactttcatcaagagtctcatctatccgatgtggaacttg 74  Q
    ||||||||||||||||| |  ||||||||||  |||||||||||||| |||||    
T  21309 cctcctctttataaactcttctcaagagtcttgtctatccgatgtgggacttg 21361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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