View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5318-Insertion-2 (Length: 1296)
Name: NF5318-Insertion-2
Description: NF5318
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5318-Insertion-2 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 1020; Significance: 0; HSPs: 24)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 1020; E-Value: 0
Query Start/End: Original strand, 8 - 1275
Target Start/End: Complemental strand, 37704459 - 37703199
Alignment:
| Q |
8 |
tttggtccttgccccttagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatcctaaatcatcaaaatgcggtccttttttattc |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37704459 |
tttggtccttgccccttagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatcctaaatcatcaaaatgcggtccttttttattc |
37704360 |
T |
|
| Q |
108 |
tattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatgatagctccgcctt |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37704359 |
tattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatgatagctccgcctt |
37704260 |
T |
|
| Q |
208 |
gttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgtctatgtgttcgtctttttcttttaagacagaatcttggaaaacc |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
37704259 |
gttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgtctatgtgtttgtctttttcttttaagacagaatcttggaaaacc |
37704160 |
T |
|
| Q |
308 |
ggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgcaacaatctgaaaggtgaattac |
407 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37704159 |
ggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgcaacaatctgaaaggtgaattac |
37704060 |
T |
|
| Q |
408 |
aacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcctcaatgcctattggtatgggcg |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||||||||| ||||| || ||||||||||||||||| |||| |
|
|
| T |
37704059 |
aacctaatagcacaatctacaagcttagacaccttcaa-caactcaacttgg-cttttaatcattttt-ctgga-tcttcaatgcctattggtattggcg |
37703964 |
T |
|
| Q |
508 |
atttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccacaatctctcatttgtcaaaattaatatcacttga |
607 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37703963 |
atttagtgaatctcacacatctaaatttatcattttgtcacctc-aagggtaat-actccctcc-acaatctctcatttgtcaaaattaatatcacttga |
37703867 |
T |
|
| Q |
608 |
tcttagcagttatagttactcgaacatggaaattaatccgttgacatggaagaaactcattcgtaatgctactaatttaagggagcttcatttggataga |
707 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37703866 |
tcttagcagttatagttactcgaacatggaaattaatccgttgacatggaagaaactcattcataatgctactaatttaagggagcttcatttgaatagt |
37703767 |
T |
|
| Q |
708 |
gtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggtttctcttagtctaccaaaaactgagttgcaaggaa |
807 |
Q |
| |
|
||| |||||||||| || | |||||||| |||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
37703766 |
gtggatatgtcttccattacggagagctcattgtcaatgctaaagaatttgtcatcctctttggtttctcttagtctatcagaaactgagttgcaaggaa |
37703667 |
T |
|
| Q |
808 |
atttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaattataaccttcgtggtcaacttccaaagtccaactggagcac |
907 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||| | |
|
|
| T |
37703666 |
atttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcattcaattataaccttagtggtcaacttccaaaatccaactggagctc |
37703567 |
T |
|
| Q |
908 |
tcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattaaagtctcttactcaattattcctttcacat |
1007 |
Q |
| |
|
||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
37703566 |
tcctctaagatacttgaacctctcttcctctgctttttcaggtgaaattccttattccataggtcaattgaagtctcttactcaattagacctttcacat |
37703467 |
T |
|
| Q |
1008 |
tgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttggatctttcaattaataagcttaacggtgagatctcaccat |
1107 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
37703466 |
tgcaatttagatgggatggttcctctatctttgtggaatctcacccaactaacatatttggacctttcatttaataaacttaacggtgagatctcaccat |
37703367 |
T |
|
| Q |
1108 |
tactttcaaacctcaaacacctcattcattgtaatcttgcagataataactttagcggtagcatcccaattgtttatggaaatttaatcaaattggaata |
1207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
37703366 |
tactttcaaacctcaaacacctcattcattgtaatcttgcatataataactttagcggaggcatcccaattgtttatggaaatttaaacaaattggaata |
37703267 |
T |
|
| Q |
1208 |
tttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacctcatcttt |
1275 |
Q |
| |
|
|||| ||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
37703266 |
tttatcactttcctctaacaagctaacaggccaagttccatcatcactttttcatctacctcaccttt |
37703199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 683; E-Value: 0
Query Start/End: Original strand, 95 - 1289
Target Start/End: Complemental strand, 37713328 - 37712141
Alignment:
| Q |
95 |
tccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatg |
194 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||| |||| ||| ||| |||||||||||||||||||| ||||||||||| |||||| | |||||| |
|
|
| T |
37713328 |
tccttttttattccattgccttattttacctttcacttcttctcgttgttgttgcttactcattttacttcccacactttctcactgtgcaacaaacatg |
37713229 |
T |
|
| Q |
195 |
atagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgt-ctatg--tgttcgtctttttcttttaagac |
291 |
Q |
| |
|
| | ||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||| | | || || || ||||| ||||||||||| ||||| |
|
|
| T |
37713228 |
acaactctgccttgttacaattcaaaaactctttttctgtcaacacttcatctcaacccaat---ccgtactttggttgttcctctttttctttcaagac |
37713132 |
T |
|
| Q |
292 |
agaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgcaacaat |
391 |
Q |
| |
|
|||||||||| ||| | | ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
37713131 |
agaatcttggcaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaat |
37713032 |
T |
|
| Q |
392 |
ctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcctcaatg |
491 |
Q |
| |
|
|| |||||||||||||| || |||||||| |||| |||||| |||||||||| | |||| |||||| ||||||||||||||| ||| || |||||| |
|
|
| T |
37713031 |
ctaaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaa-caactcaacttgg-cttttaatcatttttcttgg--tcttcaatg |
37712936 |
T |
|
| Q |
492 |
cctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccacaatctctcatttgtcaa |
591 |
Q |
| |
|
||||||||| | || ||||||||| | ||||||||||||||| ||||| |||| ||||| | | ||||| | ||| ||||||||||||||||||||| |
|
|
| T |
37712935 |
cctattggtgttggagatttagtgaaactcacacatctaaatctatcaaattgttacctcaatg-gtaata--ttccttccacaatctctcatttgtcaa |
37712839 |
T |
|
| Q |
592 |
aattaatatcacttgatcttagcagttatagttactcgaacatggaaattaatccgttgacatggaagaaactcattcgtaatgctactaatttaaggga |
691 |
Q |
| |
|
||||| ||||||||||||||||||||| | | | | | || || | ||||| |||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
37712838 |
aattagtatcacttgatcttagcagttttggggatgtggaattgaaactaaatccattgacatggaagaaactcattcataatgctactaatttaaggga |
37712739 |
T |
|
| Q |
692 |
gcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggtttctcttagtctaccaaaa |
791 |
Q |
| |
|
||| ||||||||| ||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
37712738 |
actttatttggataatgtgaacatgtcttccatcagagagagctctttgtcaatgctaaagaatttgtcatcctctttggtttctcttagtctacgagac |
37712639 |
T |
|
| Q |
792 |
actgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaattataaccttcgtggtcaacttccaa |
891 |
Q |
| |
|
|||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||||||| |
|
|
| T |
37712638 |
actgtgttgcaaggaaatatatcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatcaaaaccttagtggtcaacttccaa |
37712539 |
T |
|
| Q |
892 |
agtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattaaagtctcttactca |
991 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
37712538 |
agtccaactggagcactcctctaaggtacttggtcctctcttcctctgctttttcaggtgaaattccttattccataggtcaattgaagtctcttactca |
37712439 |
T |
|
| Q |
992 |
attattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttggatctttcaattaataagcttaac |
1091 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| ||||||| |||||| | ||||| |||||| |
|
|
| T |
37712438 |
attagtcctttcacattgcaattttgatgggatggttcctctatctttgtggaatctcacccaactaacacatttggacctttcattgaataaacttaac |
37712339 |
T |
|
| Q |
1092 |
ggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataataactttagcggtagcatcccaattgtttatggaaatt |
1191 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
37712338 |
ggtgagatctcaccattactttcaaacctcaaacacctcattcattgttatcttgcatataataactttagcggtagcatcccaaatgtttatggaaatt |
37712239 |
T |
|
| Q |
1192 |
taatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacctcatctttctcatttatattta |
1289 |
Q |
| |
|
||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37712238 |
taatcaaattgaaatatttagcactttcctctaacaacctaacaggccaagttccatcatcactttttcatctacctcatctttctcatttatattta |
37712141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 654; E-Value: 0
Query Start/End: Original strand, 95 - 1289
Target Start/End: Complemental strand, 37641585 - 37640389
Alignment:
| Q |
95 |
tccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatg |
194 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||| || ||||| ||| || ||||||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
37641585 |
tccttttttattccattgccttattttacctttcacttcttgttgttgttgttgattactcattttacttcctacactttctcactgtgcaaccaacatg |
37641486 |
T |
|
| Q |
195 |
atagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacc---cggttttctgtctatgtgttcgtctttttcttttaagac |
291 |
Q |
| |
|
| | ||| |||||||||||||||||| |||| |||||||||||||||||||||||||| || | || |||||| ||| | ||||||||||| ||||| |
|
|
| T |
37641485 |
acacctctgccttgttacaattcaaaaactctttttctgtcaacacttcatctaaaccggacgatattttgtctagttgtccctctttttctttcaagac |
37641386 |
T |
|
| Q |
292 |
agaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgcaacaat |
391 |
Q |
| |
|
|||||||||||||| | ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
37641385 |
agaatcttggaaaaacaatacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaat |
37641286 |
T |
|
| Q |
392 |
ctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcctcaatg |
491 |
Q |
| |
|
|| |||||||||||||| || |||||||| |||| |||||| ||||||||| | |||| |||||| |||||||| |||||| | | || |||||| |
|
|
| T |
37641285 |
ctaaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcac-caactcaacttgg-cttttaataatttttctttg--tcttcaatg |
37641190 |
T |
|
| Q |
492 |
cctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccacaatctctcatttgtcaa |
591 |
Q |
| |
|
||||||||| | || ||||||||| | ||||||||||||||| ||||| ||| ||||| | | ||||| | ||| ||||||||||||||||||||| |
|
|
| T |
37641189 |
cctattggtgttggagatttagtgaaactcacacatctaaatctatcaaaatgttacctcaatg-gtaata--ttccttccacaatctctcatttgtcaa |
37641093 |
T |
|
| Q |
592 |
aattaatatcacttgatcttagcagttatagttactcgaaca--------tggaaattaatccgttgacatggaagaaactcattcgtaatgctactaat |
683 |
Q |
| |
|
||||| |||||||||||||||||||||| | | | ||||| || || | ||| | || | |||||||||||||||| ||||||||||||| |
|
|
| T |
37641092 |
aattagtatcacttgatcttagcagttactggtcc--gaacaagtgggattgaaactcaattcattcatttggaagaaactcattcataatgctactaat |
37640995 |
T |
|
| Q |
684 |
ttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggtttctcttagtc |
783 |
Q |
| |
|
|||||||||||||||||| |||| ||| |||||||||| || | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37640994 |
ttaagggagcttcatttgaatagtgtggatatgtcttccattacggagagctctttgtcaatgctaaagaatttgtcatcctctttggtttctcttagtc |
37640895 |
T |
|
| Q |
784 |
taccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaattataaccttcgtggtca |
883 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||||||| |
|
|
| T |
37640894 |
tacgaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatcaaaaccttagtggtca |
37640795 |
T |
|
| Q |
884 |
acttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattaaagtct |
983 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37640794 |
acttccaaagtccaactggagcactcctctaaggtacttgaacctccgtttatctgctttctcaggtgaaattccttattccataggtcaattgaagtct |
37640695 |
T |
|
| Q |
984 |
cttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttggatctttcaattaata |
1083 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| |
|
|
| T |
37640694 |
cttactcaattagtcctttcagattgcaatttagatgggatggttcctctatctttgtggaacctcacccaactaacatatttggacctttcatttaata |
37640595 |
T |
|
| Q |
1084 |
agcttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataataactttagcggtagcatcccaattgttta |
1183 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
37640594 |
aacttaatggtgagatctcaccattactttcaaacctcaaacacctcattcattgtgatcttggatttaataactttagcggtagcatcccaattgttta |
37640495 |
T |
|
| Q |
1184 |
tggaaatttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacctcatctttctcattta |
1283 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37640494 |
tggaaatttaatcaaattggaatatttatcactttactttaacaacctaacaggccaagttccatcatcactttttcatctacctcatctttctcattta |
37640395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 639; E-Value: 0
Query Start/End: Original strand, 95 - 1277
Target Start/End: Complemental strand, 37534804 - 37533629
Alignment:
| Q |
95 |
tccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatg |
194 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||| |||||||| ||| || ||||||||||||||||||||||||||||| |||||| | |||||| |
|
|
| T |
37534804 |
tccttttttattccattgccttattttacctttcactttttcttgttgttgttgattactcattttacttcctacactttctcactgtgcaacaaacatg |
37534705 |
T |
|
| Q |
195 |
atagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgtctatgtgttcgtctttttcttttaagacaga |
294 |
Q |
| |
|
| | ||| |||||||||||||||||| |||| |||||||||| |||||||||| ||| | |||| | |||| ||||||||||| |||||||| |
|
|
| T |
37534704 |
acaactctgccttgttacaattcaaaaactctttttctgtcagcacttcatctcaactctattttgcgc------gttcttctttttctttcaagacaga |
37534611 |
T |
|
| Q |
295 |
atcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgcaacaatctg |
394 |
Q |
| |
|
||||||| ||| | | ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
37534610 |
atcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaacaatcta |
37534511 |
T |
|
| Q |
395 |
aaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcctcaatgcct |
494 |
Q |
| |
|
|||||||||||||| || |||||||| |||| |||||| |||||||||| | |||| |||||| ||||||||||||||| ||| || ||||| ||| |
|
|
| T |
37534510 |
aaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaa-caactcaacttgg-cttttaatcatttttcttgg--tcttcaatacct |
37534415 |
T |
|
| Q |
495 |
attggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccacaatctctcatttgtcaaaat |
594 |
Q |
| |
|
|||||| | || ||||||||| | ||||||||||||||| |||||| | | ||||| | ||||| | ||| |||||||||||||||||||||||| |
|
|
| T |
37534414 |
attggtgttggagatttagtgaaactcacacatctaaatctatcatactctgacctcagtg-gtaata--ttccttccacaatctctcatttgtcaaaat |
37534318 |
T |
|
| Q |
595 |
taatatcacttgatcttagcagttatagttactc-gaac----atggaaatt-aatccgttgacatggaagaaactcattcgtaatgctactaatttaag |
688 |
Q |
| |
|
|| |||||||||||||||||||||| | | | | ||| || |||| | ||| |||| | |||||||||||||||| |||||||||||||||||| |
|
|
| T |
37534317 |
tagtatcacttgatcttagcagttactggtccgcagaagtgggattgaaactcaattcgttcatttggaagaaactcattcataatgctactaatttaag |
37534218 |
T |
|
| Q |
689 |
ggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggtttctcttagtctacca |
788 |
Q |
| |
|
||| ||| ||||||||| ||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
37534217 |
ggaactttatttggataatgtgaacatgtcttccatcagagagagctctttgtcaatgctaaagaatttgtcatcctctttggtttctcttagtctatca |
37534118 |
T |
|
| Q |
789 |
aaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaattataaccttcgtggtcaacttc |
888 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
37534117 |
gaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaatgataaccttagtggtcaacttc |
37534018 |
T |
|
| Q |
889 |
caaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattaaagtctcttac |
988 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
37534017 |
caaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattgaagtctcttac |
37533918 |
T |
|
| Q |
989 |
tcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttggatctttcaattaataagctt |
1088 |
Q |
| |
|
||||||| |||||||| |||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||| |
|
|
| T |
37533917 |
tcaattagtcctttcattctgcaattttgatggaatggttcctctatctttgtggaacctcacccaactaacatatttggatctttcacataataaactt |
37533818 |
T |
|
| Q |
1089 |
aacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataataactttagcggtagcatcccaattgtttatggaa |
1188 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| | ||||||||||| ||||||||||| |
|
|
| T |
37533817 |
aacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtgatcttggattgaataactttagtgctagcatcccaaatgtttatggaa |
37533718 |
T |
|
| Q |
1189 |
atttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacctcatctttct |
1277 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37533717 |
atttaatcaaattggaatatttatcactttcctctaacaacctaacaggccaagttccatcatcactttttcatctacctcacctttct |
37533629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 613; E-Value: 0
Query Start/End: Original strand, 87 - 1293
Target Start/End: Complemental strand, 37698505 - 37697300
Alignment:
| Q |
87 |
aaatgcggtccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcag |
186 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| | |||||||| |||||||| ||| ||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
37698505 |
aaatggggtccttttttattctattgccttattttgcctttcactttttcttgttgttgttgcttactcattttacttcctacacactctcattatgcaa |
37698406 |
T |
|
| Q |
187 |
ccaacatgatagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgtctatgtgttcgtctttttctttt |
286 |
Q |
| |
|
||| ||||| || || |||||||||||||||||| |||||||||| || |||||||| ||| |||| | | || ||||| ||||| |||||||||| |
|
|
| T |
37698405 |
ccatcatgacagttctgccttgttacaattcaaaaactcattttcagttaacacttcgtctcaacctgatatttggtctagatgttcctctttttcttcc |
37698306 |
T |
|
| Q |
287 |
aagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgca |
386 |
Q |
| |
|
| ||||||||||||||||| | |||||||||||| ||||||||||||||||||| ||||| | ||| ||| |||||||||||||||| |||||||||| |
|
|
| T |
37698305 |
aggacagaatcttggaaaaacaatacagattgttgcaagtgggatggtgtcacgtgtgacactgagtcggattacgtgattggtttggacctcagttgca |
37698206 |
T |
|
| Q |
387 |
acaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcct |
486 |
Q |
| |
|
||||| |||||||||||||||| || |||||||| |||| | ||||||||| ||||||| | ||| | |||| |||||||| |||||| ||| || | |
|
|
| T |
37698205 |
acaatttgaaaggtgaattacatcccaatagcactatcttccagcttagacgccttcaa-caacttaatttgg-cttttaataatttttcttgg--tctt |
37698110 |
T |
|
| Q |
487 |
caatgcctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccacaatctctcattt |
586 |
Q |
| |
|
|||| ||||||||| | || ||||||||| | ||||||||||||||| ||||| |||| ||||| | | ||||| | ||| |||||||||||||||| |
|
|
| T |
37698109 |
caatacctattggtgtcggagatttagtgaaactcacacatctaaatctatcaaattgttacctcaatg-gtaata--ttccttccacaatctctcattt |
37698013 |
T |
|
| Q |
587 |
gtcaaaattaatatcacttgatcttagcagttatagttactcgaaca--------tggaaattaatccgttgacatggaagaaactcattcgtaatgcta |
678 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| | ||| ||||| || || | ||| | || | |||||||||||||||| |||||||| |
|
|
| T |
37698012 |
gtcaaaattagtatcacttgatcttagcagttactggtac--gaacaagtgggattgaaactcaattcattcatttggaagaaactcattcataatgcta |
37697915 |
T |
|
| Q |
679 |
ctaatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggtttctct |
778 |
Q |
| |
|
||||||||||||| |||||| | || ||||||| |||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37697914 |
ctaatttaagggatcttcatcttaatggagtgaacatgtcttcaatcggagagagctcattgtcaatgctaaagaatttgtcatcctctttggtttctct |
37697815 |
T |
|
| Q |
779 |
tagtctaccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaattataaccttcgt |
878 |
Q |
| |
|
|||||||| ||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| || |
|
|
| T |
37697814 |
tagtctacgaaacactgtgttgcaaggaaatatatcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatcaaaaccttagt |
37697715 |
T |
|
| Q |
879 |
ggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattaa |
978 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| | |||||||| | ||||||| |||||||||||||||||||||||||||||||| | |
|
|
| T |
37697714 |
ggtcaacttccaaagtccaactggagcactcctctaaggtacttagacctctcttacactgctttctcaggtgaaattccttattccataggtcaattga |
37697615 |
T |
|
| Q |
979 |
agtctcttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttggatctttcaat |
1078 |
Q |
| |
|
||| |||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37697614 |
agtatcttactcgattagatttttcatggtgcaattttgatgggatggttcctctatctttgtggaacctcactcaactaacatatttggatctttcaaa |
37697515 |
T |
|
| Q |
1079 |
taataagcttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataataactttagcggtagcatcccaatt |
1178 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
37697514 |
taataaacttaacggtgagatctcaccattactttcaaacctcaaacacctcattgattgtaatcttgcaaataataactttagcggtagcatcccaatt |
37697415 |
T |
|
| Q |
1179 |
gtttatggaaatttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacctcatctttctc |
1278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
37697414 |
gtttatggaaatttaatcaaattggaatatttagcactttcctctaacaacctaacaggccaagttccatcatcactttttcatctaccccacctttctc |
37697315 |
T |
|
| Q |
1279 |
atttatatttatcat |
1293 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
37697314 |
atttaggtttatcat |
37697300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 586; E-Value: 0
Query Start/End: Original strand, 269 - 1296
Target Start/End: Complemental strand, 37825425 - 37824405
Alignment:
| Q |
269 |
tgttcgtctttttcttttaagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattg |
368 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||| ||| | | ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
37825425 |
tgttcctctttttctttcaagacagaatcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattg |
37825326 |
T |
|
| Q |
369 |
gtttggatctcagttgcaacaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaat |
468 |
Q |
| |
|
|| |||| ||||||||||||||||| |||||||||||||| || |||||||| |||| |||||| |||||||||| | |||| |||||| |||||||| |
|
|
| T |
37825325 |
gtctggacctcagttgcaacaatctaaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaa-caactcaacttgg-cttttaat |
37825228 |
T |
|
| Q |
469 |
cattttttctggaatcctcaatgcctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccc |
568 |
Q |
| |
|
|||||| | | || ||||||||||||||| | || ||||||||| | ||||||||||||||| ||||| ||| ||||| | | ||||| | || |
|
|
| T |
37825227 |
gatttttctttg--tcttcaatgcctattggtgttggagatttagtgaaactcacacatctaaatctatcaaaatgttacctcaatg-gtaata--ttcc |
37825133 |
T |
|
| Q |
569 |
tcccacaatctctcatttgtcaaaattaatatcacttgatcttagcagttatagttactcgaacatggaaattaatccgttgacatggaagaaactcatt |
668 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||| ||||| | | || | || || | ||| | || | ||||||||||||||| |
|
|
| T |
37825132 |
ttccacaatctctcatttgtcaaaattagtatcacttgatctcagcagaaactggcacgtgggattgaaactcaattcattcatttggaagaaactcatt |
37825033 |
T |
|
| Q |
669 |
cgtaatgctactaatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctt |
768 |
Q |
| |
|
| ||||||||||||||||||||| |||||| | || ||||||| |||||||||||| |||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
37825032 |
cataatgctactaatttaagggatcttcatcttaatggagtgaacatgtcttcaatcggagagagctcattgtcaatgctaaagaatttgtcatcctctt |
37824933 |
T |
|
| Q |
769 |
tggtttctcttagtctaccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaatta |
868 |
Q |
| |
|
|||||||||||||||||| ||| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
37824932 |
tggtttctcttagtctacgaaacactgtgttgcaaggaaatatatcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatca |
37824833 |
T |
|
| Q |
869 |
taaccttcgtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccata |
968 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
37824832 |
taaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttggacctctcttcctctgctttttcaggtgaaattccttattccata |
37824733 |
T |
|
| Q |
969 |
ggtcaattaaagtctcttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttgg |
1068 |
Q |
| |
|
|||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37824732 |
ggtcaattgaagtctcttactcaattagacctttcatattgcaattttgatgggattgttcctctatctttgtggaacctcacccaactaacatatttgg |
37824633 |
T |
|
| Q |
1069 |
atctttcaattaataagcttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataataactttagcggtag |
1168 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
37824632 |
acctttcacaaaataagcttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtgatcttgcagagaataactttagcggtag |
37824533 |
T |
|
| Q |
1169 |
catcccaattgtttatggaaatttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacct |
1268 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37824532 |
catcccaaatgtttatggaaatttaatcaaattggaatatttagcactttcctctaacaacctaacaggccaagttccatcatcactttttcatctacct |
37824433 |
T |
|
| Q |
1269 |
catctttctcatttatatttatcatcta |
1296 |
Q |
| |
|
||||||||| |||||||||||||||||| |
|
|
| T |
37824432 |
catctttcttatttatatttatcatcta |
37824405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 576; E-Value: 0
Query Start/End: Original strand, 269 - 1296
Target Start/End: Original strand, 37399451 - 37400462
Alignment:
| Q |
269 |
tgttcgtctttttcttttaagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattg |
368 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||| ||| | | ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
37399451 |
tgttcctctttttctttcaagacagaatcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattg |
37399550 |
T |
|
| Q |
369 |
gtttggatctcagttgcaacaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaat |
468 |
Q |
| |
|
|| |||| |||||||||||||| || |||||||||||||| || ||||||| |||| ||||||||||||||||| | ||| | |||| |||||||| |
|
|
| T |
37399551 |
gtctggacctcagttgcaacaaactaaaaggtgaattacatcccaatagcatcatctttcagcttagacaccttcaa-caacttaatttgg-cttttaat |
37399648 |
T |
|
| Q |
469 |
cattttttctggaatcctcaatgcctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccc |
568 |
Q |
| |
|
|||||| |||| || ||||||||||||||| | || ||||||||| | ||||||||||||||| ||||| |||| ||||| | | ||||| | || |
|
|
| T |
37399649 |
aattttt-ctggg-tcttcaatgcctattggtgttggagatttagtgaaactcacacatctaaatacatcatattgtaacctcaatg-gtaata--ttcc |
37399743 |
T |
|
| Q |
569 |
tcccacaatctctcatttgtcaaaattaatatcacttgatcttagcagttatagttactcgaacatggaaattaatccgttgacatggaagaaactcatt |
668 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||||||||||||||| || | || |||||| || || | ||||||||||||||||||||| |
|
|
| T |
37399744 |
ttccacaatctctcatttgtcaaaattagtatcacttgatcttagc--tttaactttgtcgaacttg-------attcattgacatggaagaaactcatt |
37399834 |
T |
|
| Q |
669 |
cgtaatgctactaatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctt |
768 |
Q |
| |
|
| ||||||||||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37399835 |
cataatgctactaatttaagggagcttcatttgaatattgtgaacatgtcttccctcagagagagctctttgtcaatgctaaagaatttgtcatcctctt |
37399934 |
T |
|
| Q |
769 |
tggtttctcttagtctaccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaatta |
868 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
37399935 |
tggtttctcttagtctatcagaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatca |
37400034 |
T |
|
| Q |
869 |
taaccttcgtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccata |
968 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
37400035 |
aaaccttagtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctcttcctctgctttttcaggtgaaattccctattccata |
37400134 |
T |
|
| Q |
969 |
ggtcaattaaagtctcttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttgg |
1068 |
Q |
| |
|
|| ||||| |||| |||||||| |||| |||||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
37400135 |
ggccaattgaagtatcttactcgattagatttttcacggtgcaatttagatgggatggttcctctatctttgtggaacctcacccaactaacatatttgg |
37400234 |
T |
|
| Q |
1069 |
atctttcaattaataagcttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataataactttagcggtag |
1168 |
Q |
| |
|
| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| |||| |
|
|
| T |
37400235 |
acctttcatttaataaacttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtgatcttggatttaataactttagtagtag |
37400334 |
T |
|
| Q |
1169 |
catcccaattgtttatggaaatttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacct |
1268 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37400335 |
catcccaattgtttatggaaatttaatcaaattggaatatttagcactttcctctaacaacctaacaggccaagttccatcatcactttttcatctacct |
37400434 |
T |
|
| Q |
1269 |
catctttctcatttatatttatcatcta |
1296 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
37400435 |
catctttctcatttatatttatcatcta |
37400462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 527; E-Value: 0
Query Start/End: Original strand, 87 - 1293
Target Start/End: Complemental strand, 37437413 - 37436220
Alignment:
| Q |
87 |
aaatgcggtccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcag |
186 |
Q |
| |
|
||||| |||||||||||||||| ||||||| |||| | |||||||||||| ||| ||| |||||||||| |||||| || ||||||||||||| |||| |
|
|
| T |
37437413 |
aaatggggtccttttttattcttttgccttgttttgcccttcacttgttctcgttgttgttgcttactcactttactacccacactttctcattatgcaa |
37437314 |
T |
|
| Q |
187 |
ccaacatgatagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgt-ctatg--tgttcgtctttttct |
283 |
Q |
| |
|
||| ||||| | ||| ||||| |||||||||||| |||| ||| | |||||||||||||| ||||| | | || || || |||| ||||||||| |
|
|
| T |
37437313 |
ccatcatgacacctctgccttattacaattcaaaaactcttttcttctcaacacttcatctcaacccaat---ccgtactttggttgtttctctttttct |
37437217 |
T |
|
| Q |
284 |
tttaagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagtt |
383 |
Q |
| |
|
|| ||||||||||||||| ||| | | ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| |||| ||||||| |
|
|
| T |
37437216 |
ttcaagacagaatcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagtt |
37437117 |
T |
|
| Q |
384 |
gcaacaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaat |
483 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| |||| |||||| |||||||||| | |||| |||||| ||||||||||||||| ||| | | |
|
|
| T |
37437116 |
gcaacaatctgaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttcaa-caactcaacttgg-cttttaatcattttt-ctg-agt |
37437021 |
T |
|
| Q |
484 |
cctcaatgcctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccacaatctctca |
583 |
Q |
| |
|
| ||||| ||||||||||| | ||||||||| | |||||||||||||| |||||| ||| ||||| | ||||| | ||| ||| ||||||||| |
|
|
| T |
37437020 |
cttcaatacctattggtattagtgatttagtgaaactcacacatctaaacctatcatactgtgacctcagtg-gtaata--ttccttccaaaatctctca |
37436924 |
T |
|
| Q |
584 |
tttgtcaaaattaatatcacttgatcttagcagttatagttactcgaacatggaaattaatccgttgacatggaagaaactcattcgtaatgctactaat |
683 |
Q |
| |
|
||||||||||||| |||| |||||||||| || |||| || | ||||| | ||||| || |||||||||||||||||| ||||||||||||| |
|
|
| T |
37436923 |
tttgtcaaaattagtatcccttgatcttaacaattatgattctt------tggaactcaatccattcgcatggaagaaactcattcataatgctactaat |
37436830 |
T |
|
| Q |
684 |
ttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggtttctcttagtc |
783 |
Q |
| |
|
||||||||||||||| || || ||||||| ||||||||||| ||||||||||||||| | || ||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
37436829 |
ttaagggagcttcatctgaatggagtgaaaatgtcttcaattggagagagctctttgtcgttgttaacgaatttgtcatcttctttggtttctcttagtc |
37436730 |
T |
|
| Q |
784 |
taccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaattataaccttcgtggtca |
883 |
Q |
| |
|
|| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||| ||||||| |
|
|
| T |
37436729 |
tagcatccactcagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatttaatcaaaaccttagtggtca |
37436630 |
T |
|
| Q |
884 |
acttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattaaagtct |
983 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37436629 |
acttccaaagtccaactggagcactcctctaaggtacttgaacctccgtttatctgctttctcaggtgaaattccttattccataggtcaattgaagtct |
37436530 |
T |
|
| Q |
984 |
cttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttggatctttcaattaata |
1083 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
37436529 |
cttactcaattagaccttttaggttgcaattttgatgggatggttcctctatctttgtggaacctcactcaactaacatatttggacctttcaagaaata |
37436430 |
T |
|
| Q |
1084 |
agcttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataataactttagcggtagcatcccaattgttta |
1183 |
Q |
| |
|
| |||||| ||||||| ||||||||||||||||||| | |||||||||| ||||| | |||| | |||||||||||||||||||||| |||| |||||| |
|
|
| T |
37436429 |
aacttaacagtgagatttcaccattactttcaaacccctcacacctcatttattgtgaccttggatataataactttagcggtagcattccaaatgttta |
37436330 |
T |
|
| Q |
1184 |
tggaaatttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacctcatctttctcattta |
1283 |
Q |
| |
|
| |||||||| |||||||||||||||| ||||||||| |||| |||| |||||||||||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
37436329 |
tcaaaatttaaccaaattggaatatttatcactttcctccaacagcctaacaggccaagttccatcatcactttttcatctaccccacctttctcattta |
37436230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 654 - 1277
Target Start/End: Complemental strand, 37595476 - 37594853
Alignment:
| Q |
654 |
tggaagaaactcattcgtaatgctactaatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaaga |
753 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||| || | ||||||||||||| |||||||||| |
|
|
| T |
37595476 |
tggaagaaactcattcataatgctactaatttaagggagcttcatttgaatagtgtggatatgtcttccattacggagagctctttgtccatgctaaaga |
37595377 |
T |
|
| Q |
754 |
atttgtcatcctctttggtttctcttagtctaccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattgga |
853 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37595376 |
atttttcatcctctttggtttctcttcttctacgaaacactgggttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattgga |
37595277 |
T |
|
| Q |
854 |
tttgtcatctaattataaccttcgtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaa |
953 |
Q |
| |
|
|||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| |||||||||||||||||| |
|
|
| T |
37595276 |
tttgtcatttaatgataaccttagtggtcaacttccaaagtccaacttgagcactcctctaaggtacttgaacctccgtttatctgctttttcaggtgaa |
37595177 |
T |
|
| Q |
954 |
attccttattccataggtcaattaaagtctcttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactc |
1053 |
Q |
| |
|
||||||||||||||||||||||| |||| |||||||| |||| ||||| ||| |||| |||||||| |||||||||||||||||||||||||| | |
|
|
| T |
37595176 |
attccttattccataggtcaattgaagtatcttactcgattagatttttcatggtgccatttagatgggatggttcctctatctttgtggaacctcaccc |
37595077 |
T |
|
| Q |
1054 |
aactaacatatttggatctttcaattaataagcttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataa |
1153 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| |
|
|
| T |
37595076 |
aactaacatatttgagtctttcatataataagcttgacggtgagatctcaccattactttcaaacctcaaacacctcattcattatgatcttacagataa |
37594977 |
T |
|
| Q |
1154 |
taactttagcggtagcatcccaattgtttatggaaatttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcatca |
1253 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
37594976 |
taactttagcggtagcatcccaattgtttatggaaatttaatcaaattggaatatttagcactttcctttaacaacctaacaggccaagttccatcatca |
37594877 |
T |
|
| Q |
1254 |
ctttttcatctacctcatctttct |
1277 |
Q |
| |
|
||||||||||||||||| |||||| |
|
|
| T |
37594876 |
ctttttcatctacctcacctttct |
37594853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 268 - 1173
Target Start/End: Original strand, 37391584 - 37392485
Alignment:
| Q |
268 |
gtgttcgtctttttcttttaagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgatt |
367 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||||| | | ||| |||||||| |||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
37391584 |
gtgttcctctttttctttcaagacagaatcttggaaaaacagtacaaattgttgcaagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgatt |
37391683 |
T |
|
| Q |
368 |
ggtttggatctcagttgcaacaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaa |
467 |
Q |
| |
|
| | || ||||||||||||||| |||| ||||| ||||| || |||||||| |||| ||||||||||||||||| | |||| ||||| |||| || |
|
|
| T |
37391684 |
gaactagacctcagttgcaacaatttgaatggtgatttacatcccaatagcactatctttcagcttagacaccttcaa-caactcaacttgt-ctttaaa |
37391781 |
T |
|
| Q |
468 |
tcattttttctggaatcctcaatgcctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactcc |
567 |
Q |
| |
|
| |||||| || || ||| ||| | ||||||| || ||||||||| |||||||| |||||||| ||||| |||| ||||| || | | || ||| |
|
|
| T |
37391782 |
ttttttttttggg--tcttcattgcatgttggtattggtgatttagtgaatctcacatatctaaatctatcaaattgttacctc--agtggtaatattcc |
37391877 |
T |
|
| Q |
568 |
ctcccacaatctctcatttgtcaaaattaatatcacttgatcttagcagttatagttactcg----aaca--tggaaattaatccgttgacatggaagaa |
661 |
Q |
| |
|
|||| |||||||||||||||||||||||| |||||||||||||||||| ||| | ||| | |||| | || || || | |||||||||||||| |
|
|
| T |
37391878 |
ctcc-acaatctctcatttgtcaaaattagtatcacttgatcttagcaattaccggcacttggaacaacaactcaaacttgatacattgacatggaagaa |
37391976 |
T |
|
| Q |
662 |
actcattcgtaatgctactaatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtca |
761 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |||||||| |||||| ||| || |||||||||||||||| |||||||||||| ||||| |
|
|
| T |
37391977 |
actcattcataatgctactaatttaagggagcttcatttgaatagagtggatatgtattccattagagagagctctttgtctatgctaaagaatgtgtca |
37392076 |
T |
|
| Q |
762 |
tcctctttggtttctcttagtctaccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcat |
861 |
Q |
| |
|
|||||||||||||||||||| ||| | ||| || ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||| |
|
|
| T |
37392077 |
tcctctttggtttctcttaggctaggagaaattgggttgcaaggaaatttgtcaagtgccatcctctctttacctaatcttcaaagactagatttgtca- |
37392175 |
T |
|
| Q |
862 |
ctaattataaccttcgtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattcctta |
961 |
Q |
| |
|
||| || | ||| | ||| |||||||||| || |||||||||||||||||||||||||||| ||| ||| | |||| |||||||||||||| | |
|
|
| T |
37392176 |
--aataatgaacttagcggtaaacttccaaaatcaaactggagcactcctctaaggtacttggacctatctggcatcactttctcaggtgaaattcccaa |
37392273 |
T |
|
| Q |
962 |
ttccataggtcaattaaagtctcttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaaca |
1061 |
Q |
| |
|
|| ||||| || || |||| ||||||||||||| |||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37392274 |
atctataggccatttgaagtatcttactcaattagtcctttcatattgcaatttagatgggatggttcctctatctttgtggaacctcactcaactaaca |
37392373 |
T |
|
| Q |
1062 |
tatttggatctttcaattaataagcttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataataacttta |
1161 |
Q |
| |
|
||||||| |||||| ||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| | ||||| |||||| |
|
|
| T |
37392374 |
catttggacctttcacaaaataaacttaacggtgagatctcaccattatttttgaacctcaaacacctcattcattgtgatcttggatataattacttta |
37392473 |
T |
|
| Q |
1162 |
gcggtagcatcc |
1173 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
37392474 |
gcggtaacatcc |
37392485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 118 - 1289
Target Start/End: Original strand, 37380802 - 37381978
Alignment:
| Q |
118 |
ttttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatgatagctccgccttgttacaattc |
217 |
Q |
| |
|
|||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||| ||||||||||| || ||||||||||| ||| |
|
|
| T |
37380802 |
ttttacctttcacttgttcttgttgttgttgcttactcattttacttcccacactttctcattgtgcaaccaacatgatacatctgccttgttacatttc |
37380901 |
T |
|
| Q |
218 |
aaacactcattttctgtcaacacttcatctaaacccggt------tttctgtctatgtgttcgtctttttcttttaagacagaatcttggaaaaccggca |
311 |
Q |
| |
|
||| ||||||||||| ||||||||||||| ||| ||| | ||| | ||| ||||| |||||||||| |||| |||||||||||||| | |
|
|
| T |
37380902 |
aaaaactcattttctttcaacacttcatcgaaatccgatatacatttttggcctagatgttccactttttctttcaagatagaatcttggaaaaataata |
37381001 |
T |
|
| Q |
312 |
cagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgcaacaatctgaaaggtgaattacaacc |
411 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| || |||| ||||| ||||||||| |||| |||||||||| ||||||||| ||||||||||| || |
|
|
| T |
37381002 |
cagattgttgtgggtgggatggtgtcacgtgcgactccatgtcagatcatgtgattggtctggacctcagttgcagcaatctgaatggtgaattacatcc |
37381101 |
T |
|
| Q |
412 |
taatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcctcaatgcctattggtatgggcgattt |
511 |
Q |
| |
|
||||||||||||| | ||||||||||||||||| | |||| |||||| |||||||| |||||| |||| || | | ||| | || |||| | ||||| |
|
|
| T |
37381102 |
caatagcacaatcttccagcttagacaccttcaa-caactcaacttgg-cttttaataattttt-ctggg-tctttattgcatgttagtattgatgattt |
37381197 |
T |
|
| Q |
512 |
agtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccacaatctctcatttgtcaaaattaatatcacttgatctt |
611 |
Q |
| |
|
|||| ||||||||||||||||| ||||| ||| |||| | ||||| | ||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37381198 |
agtgaatctcacacatctaaatctatcacactgttccctcggtg-gtaat-attccctcc-acaatctctcatttgtcaaaattagtatcacttgatctc |
37381294 |
T |
|
| Q |
612 |
agcagttatagttactcgaacatgg------aaattaatccgttgacatggaagaaactcattcgtaatgctactaatttaagggagcttcatttggata |
705 |
Q |
| |
|
||||||||| | | | | | |||| || | ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| | | |
|
|
| T |
37381295 |
agcagttattatgattggcatatgggattgaaactcaatccattgacatggaagaaactcattcataatgctactaatttaagggagctttctttaggtt |
37381394 |
T |
|
| Q |
706 |
gagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggtttctcttagtctaccaaaaactgagttgcaagg |
805 |
Q |
| |
|
| ||||| ||||| || || |||| ||||||||| | |||||||||||||||||||||||||||||||||||| ||||| | |||||| ||||||||| |
|
|
| T |
37381395 |
gtgtgaacatgtcctctattagagcgagctctttatctatgctaaagaatttgtcatcctctttggtttctcttggtctaggagaaactgggttgcaagg |
37381494 |
T |
|
| Q |
806 |
aaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaattataaccttcgtggtcaacttccaaagtccaactggagc |
905 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||| | | ||||| ||||||||| | | || | |||||||||| || |||||||||||| |
|
|
| T |
37381495 |
aaatttgtcaagtgacatcctctctttacctaatctccaaacactagatttatcatctaataaatatctgagcagtcaacttccgaaatccaactggagc |
37381594 |
T |
|
| Q |
906 |
actcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattaaagtctcttactcaattattcctttcac |
1005 |
Q |
| |
|
|||||| | |||||||||| ||||||| | | |||| |||||||||||||||||||||||||| || || |||||||| ||||||||| |||| | |
|
|
| T |
37381595 |
actcctttgaggtacttggacctctctcgcacccctttctcaggtgaaattccttattccataggccagttgaagtctctaactcaattagaccttgaaa |
37381694 |
T |
|
| Q |
1006 |
attgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttggatctttc-aattaataagcttaacggtgagatctcac |
1104 |
Q |
| |
|
||||||||||| ||| | |||||| ||||||| |||||||||||||||| |||| || | |||||| || || || ||||| ||||||||| || |
|
|
| T |
37381695 |
tgtgcaattttgacgggttgattcctccatctttggggaacctcactcaactcacatcctt-gttctttcaaagcaacaatcttaaaggtgagatcccat |
37381793 |
T |
|
| Q |
1105 |
cattactttcaaacctcaaacacctcattcattgtaatcttgcag-ataataactttagcggtagcatcccaattgtttatggaaatttaatcaaattgg |
1203 |
Q |
| |
|
||| ||||||||| || | |||||||| | | | | ||||| ||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||| | |
|
|
| T |
37381794 |
catcactttcaaaacttacacacctcacttactttgatctt-cagtataataactttagcggtagcatcccaaatgtttttgaaaatttaatcaaattag |
37381892 |
T |
|
| Q |
1204 |
aatatttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacctcatctttctcatttatattta |
1289 |
Q |
| |
|
||||||||| | | ||| ||| || ||| |||| ||||||||||||||| ||| |||| || | ||||||||| || ||||| |
|
|
| T |
37381893 |
aatatttaggattctccggtaataatctaagtggcctagttccatcatcactgtttaatctgactgagctttctcatctagattta |
37381978 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 232; E-Value: 1e-127
Query Start/End: Original strand, 87 - 1061
Target Start/End: Complemental strand, 37430469 - 37429486
Alignment:
| Q |
87 |
aaatgcggtccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcag |
186 |
Q |
| |
|
||||| ||||||||| | ||||||| |||||| || | ||||||||||||||||| ||||||| |||| |||||||||||| || || ||| |||||| |
|
|
| T |
37430469 |
aaatggggtccttttgttttctatttccttatcttgcctttcacttgttcttgttgatgctgctaactctttttacttcctatacattttcaatgtgcaa |
37430370 |
T |
|
| Q |
187 |
ccaacatgatagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgtctatgtgttcgtctttttctttt |
286 |
Q |
| |
|
|| ||||| || || ||||||||||||||||| | ||||||| | |||||||||||||| |||| |||||| |||| ||||| ||||||||||| |
|
|
| T |
37430369 |
gcatcatgacagttctgccttgttacaattcaagaattcattttttatcaacacttcatctcaacctggtttttggtctcactgttcctctttttctttc |
37430270 |
T |
|
| Q |
287 |
aagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgca |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||| | ||||||||| |||| || ||||||| |
|
|
| T |
37430269 |
aagacagaatcttggaaaaccggcacagattgctgcgagtgggatggtgtcacgtgcgacatcatgtacgattatgtgattggtctggaccttagttgca |
37430170 |
T |
|
| Q |
387 |
acaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcct |
486 |
Q |
| |
|
|||||||||| ||||||||| | |||||||| |||| | |||| |||||||| ||| |||| |||| |||||||||| |||||||| || || | |
|
|
| T |
37430169 |
acaatctgaacggtgaattagcggccaatagcaccatctttcaacttaaacaccttc-aacaactcaactt-ggcttttaatgattttttcggg--tctt |
37430074 |
T |
|
| Q |
487 |
caatgcctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctcca--agagtaattactccctcccacaatctctcat |
584 |
Q |
| |
|
| ||| | |||||| || ||| ||||| | ||||||||||||||| ||||| |||| || || | | || | ||| |||||||||||||| |
|
|
| T |
37430073 |
cggtgcatgctggtattggtgatctagtgaagctcacacatctaaatctatca----aacaccggcattagtggtaatatttcct-ccacaatctctcat |
37429979 |
T |
|
| Q |
585 |
ttgtcaaaattaatatcacttgatcttagcagttatagttactcgaacatg------------gaaattaatccgttgacatggaagaaactcattcgta |
672 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||| ||| || ||| | ||||||||||||||||||| || |
|
|
| T |
37429978 |
ttgtcaaaattagtatcacttgatcttagcagttatagttactggaacatggaacagaaactcgaacttggtccactcacatggaagaaactcattctta |
37429879 |
T |
|
| Q |
673 |
atgctactaatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggt |
772 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||| |||| |||| |||||||||||| ||||||| | |||||| |||||| || ||||||||||| |
|
|
| T |
37429878 |
atgctactaatttaagggagcttcatttgaatactgtggatatatctttaatcagagagagatctttgtcgctgctaaggaatttatcgtcctctttggt |
37429779 |
T |
|
| Q |
773 |
ttctcttagtctaccaaaaactgagttgcaaggaaatttgtca----agtgacatcctctctttacctaatcttcaaagattggatttgtcatctaatta |
868 |
Q |
| |
|
||||| |||| ||| |||| ||||||| |||||| || |||||||||||||||||||| ||||||||| | | |||||||| | |||| | |
|
|
| T |
37429778 |
cgctcttgatctatcaatcactggcttgcaagaaaattttccaagctagtgacatcctctctttaccaaatcttcaagaactagatttgtcttttaatga |
37429679 |
T |
|
| Q |
869 |
taaccttcgtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccata |
968 |
Q |
| |
|
||||| |||| |||||||| |||||||||||||||||| ||||||||||||| |||||| | | | || || || | ||||||||| ||||||||| |
|
|
| T |
37429678 |
ggaccttagtgggaaacttccactgtccaactggagcactcccctaaggtacttggacctctcatacaccgccttctcggatgaaattccctattccata |
37429579 |
T |
|
| Q |
969 |
ggtcaattaaagtctcttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaaca |
1061 |
Q |
| |
|
|| | || |||| |||||| || ||| ||||||| | || ||||| ||| || ||||||||||||||||||||||||||||||||||| |
|
|
| T |
37429578 |
ggcaatttgaagtatcttacacatttaggcctttcaaactgtaatttctatgctgttcttcctctatctttgtggaacctcactcaactaaca |
37429486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 95 - 619
Target Start/End: Complemental strand, 37596037 - 37595517
Alignment:
| Q |
95 |
tccttttttattctattgccttattttacttttcacttgttcttgttattg---ctgcttactcattttacttcctacactttctcattgtgcagccaac |
191 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
37596037 |
tccttttttattccattgccttattttacctttcactttttcttgttgttgttgctgcttactcattttacttcctacactttctcattgtgcaacaaac |
37595938 |
T |
|
| Q |
192 |
atgatagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgt-ctatg--tgttcgtctttttcttttaa |
288 |
Q |
| |
|
|||| | ||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||| | | || || || ||||| ||||||||||| || |
|
|
| T |
37595937 |
atgacaactctgccttgttacaattcaaaaactctttttctgtcaacacttcatctcaacccaat---ccgtactttggttgttcctctttttctttcaa |
37595841 |
T |
|
| Q |
289 |
gacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgcaac |
388 |
Q |
| |
|
||||||||||||| ||| | | ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||||| |
|
|
| T |
37595840 |
gacagaatcttgggaaaacagtacagattgttgtgagtgggatggtgtcacgtgcgacaccatgtcagatcacgtgattggtctggacctcagttgcaac |
37595741 |
T |
|
| Q |
389 |
aatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcctca |
488 |
Q |
| |
|
||||| |||||||||||||| || |||||||| |||| |||||| |||||||| ||| |||| |||| |||||||||| | ||||||| || || ||| |
|
|
| T |
37595740 |
aatcttaaaggtgaattacatcccaatagcaccatctttcagcttaaacaccttc-aacaactcaactt-ggcttttaat-aatttttct-gagtcttca |
37595645 |
T |
|
| Q |
489 |
atgcctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccacaatctctcatttgt |
588 |
Q |
| |
|
|||||||||||| | || ||||||||| | ||||||||||||||| |||||| |||| |||| || ||||| | ||| |||||||||||||||||| |
|
|
| T |
37595644 |
atgcctattggtgttggagatttagtgaaactcacacatctaaatctatcatattgttacct-cagtggtaat--attccttccacaatctctcatttgt |
37595548 |
T |
|
| Q |
589 |
caaaattaatatcacttgatcttagcagtta |
619 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |
|
|
| T |
37595547 |
caaaattagtatcacttgatcttagcagtta |
37595517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 109; E-Value: 3e-54
Query Start/End: Original strand, 87 - 477
Target Start/End: Original strand, 37411754 - 37412144
Alignment:
| Q |
87 |
aaatgcggtccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcag |
186 |
Q |
| |
|
||||| |||||| |||| |||||||| | |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||| |||||||| |||| |
|
|
| T |
37411754 |
aaatggggtcctgttttgttctattgtcctattttacctttcacttgttcttgttgctgctgtttactcattttacttcctacaccttctcattatgcaa |
37411853 |
T |
|
| Q |
187 |
ccaacatgatagctccgccttgttacaattcaaacactcattttctgtcaa---cacttcatctaaacccggttttctgtctatgtgttcgtctttttct |
283 |
Q |
| |
|
| | ||||| |||| ||||||||||||||||| ||| | || |||||| || ||||||| | | | | || | ||| ||||| ||||||||| |
|
|
| T |
37411854 |
ctatcatgacagctttgccttgttacaattcaagaacttacttcttgtcaatggcatttcatctcagcatgatatttggcctagttgttcctctttttct |
37411953 |
T |
|
| Q |
284 |
tttaagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagtt |
383 |
Q |
| |
|
|| || ||||| |||||||||| |||||||||||||||||| ||||||||| |||||||||||| | ||||| |||||||||||||| || || | |
|
|
| T |
37411954 |
ttgaaaacagattcttggaaaaataatacagattgttgcgagtggtatggtgtcatgtgcgacaccgttttggatcatgtgattggtttggaccttaggt |
37412053 |
T |
|
| Q |
384 |
gcaacaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttc |
477 |
Q |
| |
|
|||||||||| |||||||||||||| | |||||||| |||| ||| |||| |||||||| |||||||| ||| |||||||||| |||||||| |
|
|
| T |
37412054 |
gcaacaatcttaaaggtgaattacatctcaatagcactatcttcaaacttaaacaccttc-aacgactcaact--ggcttttaatgattttttc |
37412144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 87 - 252
Target Start/End: Original strand, 37391389 - 37391554
Alignment:
| Q |
87 |
aaatgcggtccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcag |
186 |
Q |
| |
|
||||| ||||||| |||||| |||||||||||||||| |||||||||||| |||| ||| |||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
37391389 |
aaatggggtccttgtttattttattgccttattttacctttcacttgttcatgttgttgttgcttactcattttacttcctatactctctcattgtgcaa |
37391488 |
T |
|
| Q |
187 |
ccaacatgatagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacc |
252 |
Q |
| |
|
|| ||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||| ||||| |
|
|
| T |
37391489 |
ccttcatgatagctctgccttgctacaattcaaaaactcattttttgtcaacacttcatcaaaacc |
37391554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 87; E-Value: 5e-41
Query Start/End: Original strand, 93 - 254
Target Start/End: Complemental strand, 37441650 - 37441491
Alignment:
| Q |
93 |
ggtccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaaca |
192 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||||| ||||||| || |||||||||||||||||||||||||| ||||||||| |||| | | |||| |
|
|
| T |
37441650 |
ggtccttttttattttattgccttattttacctttcacatgttcttcttgttgctgcttactcattttacttcctatactttctcactgtgaaacaaaca |
37441551 |
T |
|
| Q |
193 |
tgatagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccg |
254 |
Q |
| |
|
||| | ||| |||||||||||||||||| |||| |||| |||||||||||||| ||||||| |
|
|
| T |
37441550 |
tgacacctctgccttgttacaattcaaaaactc--tttcagtcaacacttcatcgaaacccg |
37441491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 79; E-Value: 3e-36
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 37825582 - 37825460
Alignment:
| Q |
130 |
cttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatgatagctccgccttgttacaattcaaacactcattt |
229 |
Q |
| |
|
|||||||||||| ||| || ||||||||||||||||||||||||||||| |||||| | ||||||| | ||| |||||||||||||||||| |||| ||| |
|
|
| T |
37825582 |
cttgttcttgttgttgttgattactcattttacttcctacactttctcactgtgcaacaaacatgacaactctgccttgttacaattcaaaaactctttt |
37825483 |
T |
|
| Q |
230 |
tctgtcaacacttcatctaaacc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
37825482 |
tctgtcaacacttcatctaaacc |
37825460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 571 - 836
Target Start/End: Original strand, 37412233 - 37412504
Alignment:
| Q |
571 |
ccacaatctctcatttgtcaaaattaatatcacttgatcttagcagttatagttac-----tcgaacatggaaa-ttaatccgttgacatggaagaaact |
664 |
Q |
| |
|
||||||||||||| |||||||||||| |||||||||||||||||||| | | ||| || || | ||| || |||| || ||||||||| |||| |
|
|
| T |
37412233 |
ccacaatctctcacttgtcaaaattagtatcacttgatcttagcagtaactgatacatggatcaaaaactcaaacttgatcccttcacatggaaggaact |
37412332 |
T |
|
| Q |
665 |
cattcgtaatgctactaatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcc |
764 |
Q |
| |
|
||||| ||||| ||| |||||||| ||||||||| || |||| || |||||||||| |||||||||| ||||||| | |||||||||||||||||||| |
|
|
| T |
37412333 |
cattcataatgttacaaatttaagcgagcttcatctgaatagtgttgatatgtcttccatcagagagaattctttgtcgctgctaaagaatttgtcatcc |
37412432 |
T |
|
| Q |
765 |
tctttggtttctcttagtctaccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacct |
836 |
Q |
| |
|
||| |||| |||||||||||| || ||| |||||||||||||| |||||||||| | |||||||||| |
|
|
| T |
37412433 |
tctctggtctctcttagtctagggaacactagtttgcaaggaaatttagcaagtgacattccctctttacct |
37412504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 883 - 1117
Target Start/End: Original strand, 37412513 - 37412747
Alignment:
| Q |
883 |
aacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattaaagtc |
982 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
37412513 |
aacttccaatgttcaactggagcactcctctaaggtacttggatctctctttaacttttttctcaggtgaaattccttattccataggtcagttgaagtc |
37412612 |
T |
|
| Q |
983 |
tcttactcaattattcctttcacattgcaattttgatgggattg-ttcctctatctttgtggaacctcactcaactaacatatttggatctttcaattaa |
1081 |
Q |
| |
|
||| | || |||| ||| | || |||| || |||||| |||||| |||||| ||||||||||||||||||||| ||||||| |||||| |||| |
|
|
| T |
37412613 |
tctcaaccagttatcgcttaaagcatgtgatttgcat-ggattgattcctcaatctttatggaacctcactcaactaacacatttggacctttcatttaa |
37412711 |
T |
|
| Q |
1082 |
taagcttaacggtgagatctcaccattactttcaaa |
1117 |
Q |
| |
|
|| ||||||||||| ||| || ||||||||||||| |
|
|
| T |
37412712 |
caaacttaacggtgaaatcccatcattactttcaaa |
37412747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 37437525 - 37437445
Alignment:
| Q |
8 |
tttggtccttgccccttagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatcctaaatcatcaaa |
88 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
37437525 |
tttggtccttgccccttagtttcaagttatgtttcctatataaatagaggctaatcatttggtatatcctaaatcatcaaa |
37437445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 63; E-Value: 9e-27
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 37698641 - 37698571
Alignment:
| Q |
8 |
tttggtccttgccccttagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatccta |
78 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37698641 |
tttggtcctttccccgtagtttcaggttatgtttcctatataaatagaggctaatcaattggtatatccta |
37698571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 60; E-Value: 6e-25
Query Start/End: Original strand, 125 - 252
Target Start/End: Original strand, 37399289 - 37399416
Alignment:
| Q |
125 |
tttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatgatagctccgccttgttacaattcaaacact |
224 |
Q |
| |
|
||||||||||||||||| ||| || |||||||||||||||| |||||||||||| | |||| ||| ||||| | ||| |||||||||||||||||| | | |
|
|
| T |
37399289 |
tttcacttgttcttgttgttgttgattactcattttacttcatacactttctcactatgcaaccatcatgacacctctgccttgttacaattcaaaaatt |
37399388 |
T |
|
| Q |
225 |
cattttctgtcaacacttcatctaaacc |
252 |
Q |
| |
|
|||||| ||| |||||||||| ||||| |
|
|
| T |
37399389 |
cattttttgttgacacttcatcaaaacc |
37399416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 1238 - 1296
Target Start/End: Original strand, 37392484 - 37392542
Alignment:
| Q |
1238 |
ccaagttccatcatcactttttcatctacctcatctttctcatttatatttatcatcta |
1296 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||| |||| |||||||||||| |
|
|
| T |
37392484 |
ccaagttccatcatcactttttcatctacccaacctttcttttttagatttatcatcta |
37392542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1227 - 1277
Target Start/End: Complemental strand, 37429311 - 37429261
Alignment:
| Q |
1227 |
aacctagcaggccaagttccatcatcactttttcatctacctcatctttct |
1277 |
Q |
| |
|
|||||| |||||||||||||||||||| | ||||||||| |||| |||||| |
|
|
| T |
37429311 |
aacctaacaggccaagttccatcatcattgtttcatctaactcagctttct |
37429261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 482; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 87 - 1293
Target Start/End: Original strand, 16841327 - 16842523
Alignment:
| Q |
87 |
aaatgcggtccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcag |
186 |
Q |
| |
|
||||| |||||||||||||| | ||||||| |||| | ||||||||||||| | ||||||||||||| |||||||| ||||||| ||||| |||| |
|
|
| T |
16841327 |
aaatggggtccttttttattgttttgccttgttttgcccttcacttgttctttgtgctgctgcttactcactttacttcacacactttgtcattctgcaa |
16841426 |
T |
|
| Q |
187 |
ccaacatgatagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgtctatgtgttcgtctttttctttt |
286 |
Q |
| |
|
||||||||| ||||| || |||||||| |||||| |||||||||||||||||||||||||| ||| | | || ||||| ||| |||||| |
|
|
| T |
16841427 |
ccaacatgacagctctgctttgttacatttcaaaaactcattttctgtcaacacttcatctcaacttgatatt---------tgttcctctacttctttc |
16841517 |
T |
|
| Q |
287 |
aagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgca |
386 |
Q |
| |
|
|||||| |||||||||||| ||| || ||||||||| ||||||||||||||||||| ||||| | || ||| ||||| |||||||||| |||||||||| |
|
|
| T |
16841518 |
aagacaaaatcttggaaaaacggtacggattgttgcaagtgggatggtgtcacgtgtgacactgaatcagattacgtggttggtttggacctcagttgca |
16841617 |
T |
|
| Q |
387 |
acaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcct |
486 |
Q |
| |
|
||||| |||||||||||||||| || |||||||| ||| | || | |||||||||||| | |||| |||||| |||||||| |||||| |||| || | |
|
|
| T |
16841618 |
acaatttgaaaggtgaattacatcccaatagcactatcctccagttaagacaccttcaa-caactcaacttgg-cttttaataattttt-ctggg-tctt |
16841713 |
T |
|
| Q |
487 |
caatgcctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccacaatctctcattt |
586 |
Q |
| |
|
|||||||||||||||| ||||||||||| || |||||||||||||| |||||| ||| ||||| | | || | | || |||| |||||||||||||| |
|
|
| T |
16841714 |
caatgcctattggtattagcgatttagtgaatatcacacatctaaatctatcatactgtgacctcaatg-gtgac-attcactcc-acaatctctcattt |
16841810 |
T |
|
| Q |
587 |
gtcaaaattaatatcacttgatcttagcagttatagttactcgaacatgg------aaattaatccgttgacatggaagaaactcattcgtaatgctact |
680 |
Q |
| |
|
|||||||||| |||| |||||||||||| |||| ||| || ||| || | ||| |||| || |||||||||||||||| |||||||||| |
|
|
| T |
16841811 |
gtcaaaattagtatctcttgatcttagcggttactcgtacgaaaaagtgggattgaaactcaattcgttcacttggaagaaactcattcataatgctact |
16841910 |
T |
|
| Q |
681 |
aatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggtttctctta |
780 |
Q |
| |
|
|| |||||||| ||| || | || ||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
16841911 |
aaattaagggatctttatctaaatggagtgaacatgtcttcaattggagagagctctttgtcaatgctaaacaatttgtcatcctctttggtttctcttc |
16842010 |
T |
|
| Q |
781 |
gtctaccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaattataaccttcgtgg |
880 |
Q |
| |
|
|||| |||| |||| |||||||||||||||| ||||||||| |||||||| | |||||||||||| | ||||||||| |||| | ||||| |||| |
|
|
| T |
16842011 |
atctagcaaacactggtttgcaaggaaatttgttaagtgacatactctctttgtcaaatcttcaaagactagatttgtcacataatcaagaccttagtgg |
16842110 |
T |
|
| Q |
881 |
tcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaattaaag |
980 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| ||||| ||||| | ||||||||||||||||||||| |
|
|
| T |
16842111 |
tcaacttccaaaatccaactggagcactcctctaaggtacttgtacctctctcatactgctttctcaggagaaatctcctattccataggtcaattaaag |
16842210 |
T |
|
| Q |
981 |
tctcttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttggatctttcaatta |
1080 |
Q |
| |
|
||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
16842211 |
tctcttactcatttagtcctttcattttgcaattttgatgggatggttcctctatctttgtggaacctcactcaactaacatatttggatctttcaaata |
16842310 |
T |
|
| Q |
1081 |
ataagcttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtaatcttgcagataataactttagcggtagcatcccaattgt |
1180 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
16842311 |
ataaacttaacggtgagatctcaccattactttcaaacctcaaacacctcattcattgtgatcttgtatttaataactttagcggtagcatcccaattgt |
16842410 |
T |
|
| Q |
1181 |
ttatggaaatttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcatcactttttcatctacctcatctttctcat |
1280 |
Q |
| |
|
|||||||||||||| |||||| |||||| || ||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
16842411 |
ttatggaaatttaagcaaattagaatatctatcactttcctctaacagtctaacaggccaagttccatcatcactttttcatctaccttatctttctaat |
16842510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 651 - 1277
Target Start/End: Original strand, 24216751 - 24217371
Alignment:
| Q |
651 |
acatggaagaaactcattcgtaatgctactaatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaa |
750 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||| | || || ||||| | || |||||||||||||||||||||||| |||| |
|
|
| T |
24216751 |
acatggaagaaactcattcataatgctactaatttaagggagctttacctgaatggagtggacatatcttcaatcagagagagctctttg------ctaa |
24216844 |
T |
|
| Q |
751 |
agaatttgtcatcctctttggtttctcttagtctaccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagatt |
850 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||||||||||||||| |||||||||| | | |
|
|
| T |
24216845 |
agaatttgtcatcctctttggtttctcttagtctagcatccactggattgcaaggaaatatgtcaagtgacatcctctctttaccaaatcttcaaaaact |
24216944 |
T |
|
| Q |
851 |
ggatttgtcatctaattataaccttcgtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggt |
950 |
Q |
| |
|
||||||||||| ||| | ||||||||||| || |||||| |||||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||| |
|
|
| T |
24216945 |
agatttgtcatcgaatcaagaccttcgtggtaaatttccaacgtccaactggagcactcccctaaggtacttggacctctctttctctggtttctcaggt |
24217044 |
T |
|
| Q |
951 |
gaaattccttattccataggtcaattaaagtctcttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctca |
1050 |
Q |
| |
|
|||||| | || || || ||||| || |||| |||| |||| |||| |||| | ||||| |||||||| |||||||| |||||||||||| |||| |
|
|
| T |
24217045 |
gaaatttcatactctattggtcagttgaagtttcttgctcacttatcccttacggggtgcaaatttgatggatttgttccttcatctttgtggaagctca |
24217144 |
T |
|
| Q |
1051 |
ctcaactaacatatttggatctttcaattaataagcttaacggtgagatctcaccattactttcaaacctcaaacacctca-ttcattgtaatcttgcag |
1149 |
Q |
| |
|
||||||| |||| || ||||||| || || ||||| || |||||| || |||||||||||||||||| |||||||| ||| || ||||| | |
|
|
| T |
24217145 |
ctcaactcacattcttaagcctttcaaacaacaatcttaaaggcgagatcccatcattactttcaaacctcacacacctcacttcctt-agatcttcaaa |
24217243 |
T |
|
| Q |
1150 |
ataataactttagcggtagcatcccaattgtttatggaaatttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatc |
1249 |
Q |
| |
|
||||||||||| |||| |||||||| ||||| || ||||||||||||||| | | |||||||||||| ||||| | ||| |||||| ||||||| |
|
|
| T |
24217244 |
ttaataactttaatggtaacatcccaaatgtttttgaaaatttaatcaaattaaactttttagcactttcttttaatagtctaagtggccaaattccatc |
24217343 |
T |
|
| Q |
1250 |
atcactttttcatctacctcatctttct |
1277 |
Q |
| |
|
|||| | ||| ||||| |||| |||||| |
|
|
| T |
24217344 |
atcattgtttaatctaactcaactttct |
24217371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 142; E-Value: 7e-74
Query Start/End: Original strand, 95 - 539
Target Start/End: Original strand, 24216193 - 24216633
Alignment:
| Q |
95 |
tccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatg |
194 |
Q |
| |
|
||||||||||||||| ||||| |||| || |||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||||| |||| ||| |||| |
|
|
| T |
24216193 |
tccttttttattctaatgcctcatttgacctttcacttgttcatgttgttgttgcttactcattttacttcttacacttactcattctgcaaccatcatg |
24216292 |
T |
|
| Q |
195 |
atagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacccggttttctgtctatgtgttcgtctttttcttttaagacaga |
294 |
Q |
| |
|
| || || || |||||||||||||| |||||||| |||||||||||||||| |||||| | || |||||||||||| |||||| ||| | ||| || |
|
|
| T |
24216293 |
acagttctgcattgttacaattcaagaactcatttgttgtcaacacttcatctgaacccgatatttggtctatgtgttccactttttatttcaggacgga |
24216392 |
T |
|
| Q |
295 |
atcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttggatctcagttgcaacaatctg |
394 |
Q |
| |
|
||| ||||||| || |||||||||||||||||||||| |||| ||| ||||| ||| || ||||||||||| |||| || ||||||||||||||| |
|
|
| T |
24216393 |
atcctggaaaaatggtgcagattgttgcgagtgggatggggtcatgtgtgacactaggtcaaattacgtgattggtctggaccttagttgcaacaatctg |
24216492 |
T |
|
| Q |
395 |
aaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcattttttctggaatcctcaatgcct |
494 |
Q |
| |
|
|||||||| ||||| || ||| |||| |||| ||||||||||||||||| ||| |||| |||| ||| |||||| |||||| ||| || ||||||| | |
|
|
| T |
24216493 |
aaaggtgagttacatccaaattgcactatcttcaagcttagacaccttc-aacaactcaactt-ggcctttaataatttttcttgg--tcttcaatgcat |
24216588 |
T |
|
| Q |
495 |
attggtatgggcgatttagtggatctcacacatctaaatttatca |
539 |
Q |
| |
|
|||| || || ||| ||||| |||||||| |||||||||||||| |
|
|
| T |
24216589 |
gttgggattggtgatctagtgaatctcacatatctaaatttatca |
24216633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 48; E-Value: 8e-18
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 16841203 - 16841272
Alignment:
| Q |
22 |
cttagtttcaggttatgtttcctatataaata---gaggctaatcaattggtatatcctaaatcatcaaa |
88 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||| |
|
|
| T |
16841203 |
cttagtttcaggttatgtttcctatataaatagaggaggctaatcagttggtatatcgtaaatcatcaaa |
16841272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 324; Significance: 0; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 275 - 1076
Target Start/End: Complemental strand, 14554556 - 14553768
Alignment:
| Q |
275 |
tctttttcttttaagacagaatcttggaaaaccggcacagattgttgcgagtgggatggtgtcacgtgcgacaccgtgtctgatcacgtgattggtttgg |
374 |
Q |
| |
|
||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | || | ||||||||||| | | |
|
|
| T |
14554556 |
tctttttctttcaagacagaatcttggaaaaagagtacagattgttgcgagtgggatggtgtcacgtgcgacaccatatcaggtcacgtgattgaactag |
14554457 |
T |
|
| Q |
375 |
atctcagttgcaacaatctgaaaggtgaattacaacctaatagcacaatctacaagcttagacaccttcaaacgactccacttgggcttttaatcatttt |
474 |
Q |
| |
|
| || |||||||||||| |||| ||||||||||| ||||||||||| |||| | ||||||||||||||||| | |||| || | | |||||||| || || |
|
|
| T |
14554456 |
accttagttgcaacaatttgaatggtgaattacatcctaatagcactatcttccagcttagacaccttcaa-caactcaacctag-cttttaatgatatt |
14554359 |
T |
|
| Q |
475 |
ttctggaatcctcaatgcctattggtatgggcgatttagtggatctcacacatctaaatttatcattttgtcacctccaagagtaattactccctcccac |
574 |
Q |
| |
|
|| || || ||||||||| ||||||| |||||||||||| | |||| ||||||||| |||| |||| |||| | ||||| | ||| |||| |
|
|
| T |
14554358 |
tttggg--tcttcaatgcctcttggtattggcgatttagtgaaactcatgcatctaaatatatccaattgttaccttagtg-gtaata--ttccttccac |
14554264 |
T |
|
| Q |
575 |
aatctctcatttgtcaaaattaatatcacttgatcttagcagttatagttactcgaacatggaaattaatccgttgacatggaagaaactcattcgtaat |
674 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| ||| ||| | | ||||||||||||| || |||||||| |||||||||| |||| |
|
|
| T |
14554263 |
aatctctcatttgtcaaaattagtatcacttgatcttagca-tta-----actggttcttggaaattaatccatttacatggaataaactcattcataat |
14554170 |
T |
|
| Q |
675 |
gctactaatttaagggagcttcatttggatagagtgaatatgtcttcaatcagagagagctctttgttgatgctaaagaatttgtcatcctctttggttt |
774 |
Q |
| |
|
||||||||||||||||| ||| || || || ||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
14554169 |
gctactaatttaagggatctttatctgaatggagtgaacatgtcttccatcagagagagctctttgtcaatgctaaagaatttgtcatcctctttggttt |
14554070 |
T |
|
| Q |
775 |
ctcttagtctaccaaaaactgagttgcaaggaaatttgtcaagtgacatcctctctttacctaatcttcaaagattggatttgtcatctaattataacct |
874 |
Q |
| |
|
||||||||||| |||| || | ||||||||||||||||||||||||||| |||||||| || |||||||||| | | |||||| | |||| || || |
|
|
| T |
14554069 |
ctcttagtctagcaaacaccgggttgcaaggaaatttgtcaagtgacatactctctttgccaaatcttcaaaaactagatttggtaggtaatgatggtct |
14553970 |
T |
|
| Q |
875 |
tcgtggtcaacttccaaagtccaactggagcactcctctaaggtacttggtcctctctttctctgctttttcaggtgaaattccttattccataggtcaa |
974 |
Q |
| |
|
| |||||||||||||||| ||||||||||| |||||||||||||||||| |||| || ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
14553969 |
tagtggtcaacttccaaaatccaactggagtactcctctaaggtacttgtacctccattactctgctttctcaggtgaaattccttattccataggtcaa |
14553870 |
T |
|
| Q |
975 |
ttaaagtctcttactcaattattcctttcacattgcaattttgatgggattgttcctctatctttgtggaacctcactcaactaacatatttggatcttt |
1074 |
Q |
| |
|
|| |||||||||||||| ||| |||||||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
14553869 |
ttgaagtctcttactcatttagtcctttcagattgcaatttagatgggatggttcctctatctttgtggaacctcactcaactaacacatttggaccttt |
14553770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 96; E-Value: 2e-46
Query Start/End: Original strand, 95 - 252
Target Start/End: Complemental strand, 14554760 - 14554606
Alignment:
| Q |
95 |
tccttttttattctattgccttattttacttttcacttgttcttgttattgctgcttactcattttacttcctacactttctcattgtgcagccaacatg |
194 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||||| |||| |||||||||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
14554760 |
tccttttttattctattgccttattttacctttcactttttctt---attgttgcttactcattttacttcctatactttctcattgtgcaaccaacatg |
14554664 |
T |
|
| Q |
195 |
atagctccgccttgttacaattcaaacactcattttctgtcaacacttcatctaaacc |
252 |
Q |
| |
|
| | ||| |||||||||||||||||| |||| ||||||||||||||||| || ||||| |
|
|
| T |
14554663 |
acacctctgccttgttacaattcaaaaactctttttctgtcaacacttcttcgaaacc |
14554606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 1152 - 1296
Target Start/End: Complemental strand, 14553764 - 14553620
Alignment:
| Q |
1152 |
aataactttagcggtagcatcccaattgtttatggaaatttaatcaaattggaatatttagcactttcctttaacaacctagcaggccaagttccatcat |
1251 |
Q |
| |
|
|||||||| ||| | ||||||||| ||||| |||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||| |
|
|
| T |
14553764 |
aataacttaagctggagcatcccagatgtttgtggaaatttaatcaaattggaatatttataccttttctctaacaacctagcaggccaagttccatcat |
14553665 |
T |
|
| Q |
1252 |
cactttttcatctacctcatctttctcatttatatttatcatcta |
1296 |
Q |
| |
|
|||||||| |||||||||| |||||| ||||| ||||||||||| |
|
|
| T |
14553664 |
cactttttaatctacctcagctttcttttttatgtttatcatcta |
14553620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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