View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5320-Insertion-5 (Length: 677)

Name: NF5320-Insertion-5
Description: NF5320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5320-Insertion-5
NF5320-Insertion-5
[»] chr8 (15 HSPs)
chr8 (30-412)||(25617552-25617938)
chr8 (8-273)||(25391660-25391921)
chr8 (506-677)||(25392139-25392310)
chr8 (506-677)||(25358820-25358991)
chr8 (316-461)||(25391944-25392092)
chr8 (66-226)||(25494811-25494967)
chr8 (8-127)||(25358629-25358747)
chr8 (484-565)||(25650621-25650707)
chr8 (247-363)||(25650413-25650544)
chr8 (66-135)||(25678317-25678386)
chr8 (619-677)||(25650704-25650762)
chr8 (634-677)||(25398988-25399031)
chr8 (499-531)||(25617952-25617984)
chr8 (433-461)||(25358745-25358773)
chr8 (645-677)||(25618003-25618035)
[»] scaffold1041 (5 HSPs)
scaffold1041 (8-285)||(811-1084)
scaffold1041 (595-657)||(542-604)
scaffold1041 (486-537)||(605-656)
scaffold1041 (29-67)||(1221-1259)
scaffold1041 (360-421)||(708-778)
[»] scaffold0466 (4 HSPs)
scaffold0466 (484-677)||(6429-6619)
scaffold0466 (8-217)||(7955-8160)
scaffold0466 (215-393)||(7737-7930)
scaffold0466 (413-461)||(6660-6708)
[»] chr1 (1 HSPs)
chr1 (504-620)||(32973722-32973838)


Alignment Details
Target: chr8 (Bit Score: 276; Significance: 1e-154; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 30 - 412
Target Start/End: Original strand, 25617552 - 25617938
Alignment:
Q  30 tataggactccattcaaaaaggtatacttcttgtcgatatgaggagctctcaactcgtgtttttcaacttgtgggagtactattcttacggtaa-tttga 128  Q
    ||||||||| |||||||||||| |||||||| | | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  25617552 tataggactgcattcaaaaaggcatacttctcgcccatatgaggagctctcaactcgtgtttttcaacttgtgagagtactattcttacggtaaatttga 25617651  T
Q  129 tgagcgacttgcaaaaaatactatatatatttcaatcaatcttttca-------gtgtagccttttgcaactattctttccttgtgtccttcattgcaca 221  Q
    ||||||||||||||||||||||||||    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  25617652 tgagcgacttgcaaaaaatactatat----ttcaatcaatcttttcagacttcagtgtagccttttgcaactattctttccttgtgtccttcattgcaca 25617747  T
Q  222 ctttctagacattggtagccttatgcttttttagaaggttgtcaagtttatgtgttctattcttttctctgtctttaatttctttatccattgcatcttt 321  Q
    ||||||||| |||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  25617748 ctttctagaaattggtagccttatgcttttttagaagggtgtcgagtttatgtgctctattcttttctgtgtctttaatttctttatccactgcatcttt 25617847  T
Q  322 tgtagctgcttctaagtttgtgtatgcataatttgaaaagagacataataatgtggattatccattccctcatagatatctttaagtcatc 412  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||||||||||||||||    
T  25617848 tgtagctgcttctaagtttgtgtatgcataatttgaagagagacataataatgcgaagtatccattccctcatagatatctttaagtcatc 25617938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 8 - 273
Target Start/End: Original strand, 25391660 - 25391921
Alignment:
Q  8 tttcttaatgtatagttctttctataggactccattcaaaaaggtatacttcttgtcgatatgaggagctctcaactcgtgtttttcaacttgtgggagt 107  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||    
T  25391660 tttcttaatgtatagttatttctataggaatccattcaaaaaggcatacttctcgtccatatgaggagctctcaactcgtgtttttcaacttgtgagagt 25391759  T
Q  108 actattcttacggtaatttgatgagcgacttgcaaaaaatactatatatatttcaatcaatcttttcagtgtagccttttgcaactattctttccttgtg 207  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||    |||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  25391760 actattcttacggtattttgatgagagacttgcgaaaaatac----tatatttcaatcaatctttcaagtgtagccttttgcaactattctttccttgtg 25391855  T
Q  208 tccttcattgcacactttctagacattggtagccttatgcttttttagaaggttgtcaagtttatg 273  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  25391856 tccttcattgcacactttctagacattggtagccttatgcttttttagaagggtgtcgagtttatg 25391921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 506 - 677
Target Start/End: Original strand, 25392139 - 25392310
Alignment:
Q  506 ttgttcaacttctctaaatttttcttcttcaaattctggaaggaaaccgtattccttttagtgagtaataacgtctcactctccttcttcgatgaagacc 605  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25392139 ttgttcaacttctctaaatttttcttcttcaaattctggaagaaaaccgtattccttttggtgagtaataacgtctcactctccttcttcgatgaagacc 25392238  T
Q  606 acatctcgactaatttatatcttgttgttgttcatttttgacaacatgattccctttgaactttgatgataa 677  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25392239 acatctcgactaatttatatcttgttgttgttcatttttgacaacatgattccctttgaactttgatgataa 25392310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 506 - 677
Target Start/End: Original strand, 25358820 - 25358991
Alignment:
Q  506 ttgttcaacttctctaaatttttcttcttcaaattctggaaggaaaccgtattccttttagtgagtaataacgtctcactctccttcttcgatgaagacc 605  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  25358820 ttgttcaacttctctaaatttttcttcttcaaattctggaaggaaaccgtattccttttagtgagtaataacatctcactttccttcttcgatgaagacc 25358919  T
Q  606 acatctcgactaatttatatcttgttgttgttcatttttgacaacatgattccctttgaactttgatgataa 677  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  25358920 acatctcgactaatttatatcttgttgatgttcatttttgacaacatgattccctttgaactttgatgataa 25358991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 316 - 461
Target Start/End: Original strand, 25391944 - 25392092
Alignment:
Q  316 atcttttgtagctgcttctaagtttgtgtatgcataatttgaaaagagacataa-taatgt--ggattatccattccctcatagatatctttaagtcatc 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  25391944 atcttttgtagctgcttctaagtttgtgtatgcataatttgaaaagagacataaataatgtatggattatccattccctcatagatatctttaagtcatc 25392043  T
Q  413 gaggtgataagacctctgtgttgtcatagtggtatgaatactacatgtg 461  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25392044 aaggtgataagagctctgtgttgtcatagtggtatgaatactacatgtg 25392092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 25494811 - 25494967
Alignment:
Q  66 atatgaggagctctcaactcgtgtttttcaacttgtgggagtactattcttacggtaatttgatgagcgacttgcaaaaaatactatatatatttcaatc 165  Q
    |||||||||||||||||||| |||||||||| ||||| || ||||||||||| |||||||||||||||||||||| |||||||||| ||    |||||||    
T  25494811 atatgaggagctctcaactcatgtttttcaatttgtgagattactattcttatggtaatttgatgagcgacttgcgaaaaatactaaat----ttcaatc 25494906  T
Q  166 aatcttttcagtgtagccttttgcaactattctttccttgtgtccttcattgcacactttc 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25494907 aatcttttcagtgtagccttttgcaactattctttccttgtgtccttcattgcacactttc 25494967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 25358629 - 25358747
Alignment:
Q  8 tttcttaatgtatagttctttctataggactccattcaaaaaggtatacttcttgtcgatatgaggagctctcaactcgtgtttttcaacttgtgggagt 107  Q
    |||||||||||| ||| |||||||||||| |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||    
T  25358629 tttcttaatgtacagt-ctttctataggaatccattcaaaaaggcatacttctcgtccatatgaggagctctcaactcgtgtttttcaacttgtgagagt 25358727  T
Q  108 actattcttacggtaatttg 127  Q
    ||||||||||||||| ||||    
T  25358728 actattcttacggtattttg 25358747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 484 - 565
Target Start/End: Original strand, 25650621 - 25650707
Alignment:
Q  484 acaattttggtaagtgtgacactt-----gttcaacttctctaaatttttcttcttcaaattctggaaggaaaccgtattcctttta 565  Q
    ||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25650621 acaattttggtaagtgtgacacttagcttgttcaacttctctaaatttttcttcttcaaattctggaaggaaaccgtattcctttta 25650707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 247 - 363
Target Start/End: Original strand, 25650413 - 25650544
Alignment:
Q  247 cttttttagaaggttgtcaagtttatgtgttctattcttttctctgtctttaatttctttatccattgc---------------atcttttgtagctgct 331  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||               ||||||||||||||||    
T  25650413 cttttttagaagggtgtcgagtttatgtgttctattcttttctatgtctttaatttctttatccattgcatctttttgtttcttatcttttgtagctgct 25650512  T
Q  332 tctaagtttgtgtatgcataatttgaaaagag 363  Q
    ||||||||||||||||||||||||||| ||||    
T  25650513 tctaagtttgtgtatgcataatttgaagagag 25650544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 66 - 135
Target Start/End: Original strand, 25678317 - 25678386
Alignment:
Q  66 atatgaggagctctcaactcgtgtttttcaacttgtgggagtactattcttacggtaatttgatgagcga 135  Q
    |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  25678317 atatgaggagctctcaactcatgtttttcaacttgtgaaagtactattcttacggtaatttgatgagcga 25678386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 619 - 677
Target Start/End: Original strand, 25650704 - 25650762
Alignment:
Q  619 tttatatcttgttgttgttcatttttgacaacatgattccctttgaactttgatgataa 677  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  25650704 tttatatcttgttgttgttcattttttaaaacatgattccctttgaactttgatgataa 25650762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 634 - 677
Target Start/End: Original strand, 25398988 - 25399031
Alignment:
Q  634 tgttcatttttgacaacatgattccctttgaactttgatgataa 677  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25398988 tgttcatttttgacaacatgattccctttgaactttgatgataa 25399031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 531
Target Start/End: Original strand, 25617952 - 25617984
Alignment:
Q  499 gtgacacttgttcaacttctctaaatttttctt 531  Q
    |||||||||||||||||||||||||||||||||    
T  25617952 gtgacacttgttcaacttctctaaatttttctt 25617984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 433 - 461
Target Start/End: Original strand, 25358745 - 25358773
Alignment:
Q  433 ttgtcatagtggtatgaatactacatgtg 461  Q
    |||||||||||||||||||||||||||||    
T  25358745 ttgtcatagtggtatgaatactacatgtg 25358773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 645 - 677
Target Start/End: Original strand, 25618003 - 25618035
Alignment:
Q  645 gacaacatgattccctttgaactttgatgataa 677  Q
    ||||||||||||||||| |||||||||||||||    
T  25618003 gacaacatgattcccttagaactttgatgataa 25618035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 221; Significance: 1e-121; HSPs: 5)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 8 - 285
Target Start/End: Complemental strand, 1084 - 811
Alignment:
Q  8 tttcttaatgtatagttctttctataggactccattcaaaaaggtatacttcttgtcgatatgaggagctctcaactcgtgtttttcaacttgtgggagt 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  1084 tttctaaatgtatagttctttctataggactccattcaaaaaggcacacttcttgtccatatgaggagctctcaactcgtgtttttcaactcgtgagagt 985  T
Q  108 actattcttacggtaatttgatgagcgacttgcaaaaaatactatatatatttcaatcaatcttttcagtgtagccttttgcaactattctttccttgtg 207  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  984 actattcttacggtattttgatgagcgacttgcgaaaaatactatat----ttcaatcaatcttttcagtgtagccttttgcaactattctttccttgtg 889  T
Q  208 tccttcattgcacactttctagacattggtagccttatgcttttttagaaggttgtcaagtttatgtgttctattctt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||    
T  888 tccttcattgcacactttctagacattggtagccttatgcttttttagaagggtgtcgagtttatgtgttctattctt 811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 595 - 657
Target Start/End: Complemental strand, 604 - 542
Alignment:
Q  595 cgatgaagaccacatctcgactaatttatatcttgttgttgttcatttttgacaacatgattc 657  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  604 cgatgaagaccacatctcgactaatttatatcttgttgttgttcatttttgacaacatgattc 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 537
Target Start/End: Complemental strand, 656 - 605
Alignment:
Q  486 aattttggtaagtgtgacacttgttcaacttctctaaatttttcttcttcaa 537  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  656 aattttggtaagcgtgacacttgttcaacttctctaaatttttcttcttcaa 605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 1259 - 1221
Alignment:
Q  29 ctataggactccattcaaaaaggtatacttcttgtcgat 67  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  1259 ctataggactccattcaaaaaggcatacttcttgtcgat 1221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 360 - 421
Target Start/End: Complemental strand, 778 - 708
Alignment:
Q  360 agagacataataatgtggattatcc---------attccctcatagatatctttaagtcatcgaggtgata 421  Q
    |||||||||||||||||||||||||         ||| ||||||||| |||||||||||||||||||||||    
T  778 agagacataataatgtggattatccatttcctcaatttcctcatagagatctttaagtcatcgaggtgata 708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 164; Significance: 3e-87; HSPs: 4)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 484 - 677
Target Start/End: Complemental strand, 6619 - 6429
Alignment:
Q  484 acaattttggtaagtgtgacacttgttcaacttctctaaatttttcttcttcaaattctggaaggaaaccgtattccttttagtgagtaataacgtctca 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||     
T  6619 acaattttggtaagtgtgacacttgttcaacttctctaaatttttcttcttcaaattcttgaaggaaaccgtattcctttgagtgagtaataacgtctcg 6520  T
Q  584 ctctccttcttcgatgaagaccacatctcgactaatttatatcttgttgttgttcatttttgacaacatgattccctttgaactttgatgataa 677  Q
    |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||    
T  6519 ctctccttcttcgatgaagaccacatctcgactaatttatatcttgt---tgttcatttttgacaacatgattccctatgaactttgatgataa 6429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 8 - 217
Target Start/End: Complemental strand, 8160 - 7955
Alignment:
Q  8 tttcttaatgtatagttctttctataggactccattcaaaaaggtatacttcttgtcgatatgaggagctctcaactcgtgtttttcaacttgtgggagt 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  8160 tttctaaatgtatagttctttctataggactccattcaaaaaggcatagttcttgtccatatgaggagctctcaactcgtgtttttcaacttgtgagagt 8061  T
Q  108 actattcttacggtaatttgatgagcgacttgcaaaaaatactatatatatttcaatcaatcttttcagtgtagccttttgcaactattctttccttgtg 207  Q
    |||||||||| |||| ||||||||| ||||||| |||||||||    |||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  8060 actattcttatggtattttgatgagtgacttgcgaaaaatact----atatttcaatcaatattttcagcttagccttttgcaactattctttccttgtg 7965  T
Q  208 tccttcattg 217  Q
    ||||||||||    
T  7964 tccttcattg 7955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 215 - 393
Target Start/End: Complemental strand, 7930 - 7737
Alignment:
Q  215 ttgcacactttctagacattggtagccttatgcttttttagaaggttgtcaagtttatgtgttctattcttttctctgtctttaatttctttatccattg 314  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7930 ttgcacactttctagacattggtagccttaggcttttttagaagggtgtcgagtttatgtgttctattcttttctgtgtctttaatttctttatccattg 7831  T
Q  315 catc---------------ttttgtagctgcttctaagtttgtgtatgcataatttgaaaagagacataataatgtggattatccattccctca 393  Q
    ||||               |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7830 catctttttgtttcttatcttttgtagctgcttctaagtttgtgtatgcataatttgaagagagacataataatgtggattatccattccctca 7737  T

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Target: scaffold0466; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 461
Target Start/End: Complemental strand, 6708 - 6660
Alignment:
Q  413 gaggtgataagacctctgtgttgtcatagtggtatgaatactacatgtg 461  Q
    |||||||||||| || ||||||||||||||| |||| ||||||| ||||    
T  6708 gaggtgataagagctatgtgttgtcatagtgatatggatactacgtgtg 6660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 620
Target Start/End: Complemental strand, 32973838 - 32973722
Alignment:
Q  504 acttgttcaacttctctaaatttttcttcttcaaattctggaaggaaaccgtattccttttagtgagtaataacgtctcactctccttcttcgatgaaga 603  Q
    ||||||| ||| |||||| || ||||||||||||||| ||||| ||||  ||||||||||| ||||||  |||  || || | ||||||||||   ||||    
T  32973838 acttgttgaacgtctctagatgtttcttcttcaaattatggaaagaaattgtattcctttttgtgagttctaaattcccattttccttcttcgtcaaaga 32973739  T
Q  604 ccacatctcgactaatt 620  Q
    | |||||||| ||||||    
T  32973738 caacatctcgtctaatt 32973722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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