View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5320_high_11 (Length: 301)
Name: NF5320_high_11
Description: NF5320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5320_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 38556428 - 38556710
Alignment:
| Q |
1 |
ctgtaggtaattacgagtttgtcttggatttggaaacttaagatgacattctttcacaatgatgaataattttttatggtttaacattcatgcaaatggt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
38556428 |
ctgtaggtaattacgagtttgtcttggatttggaaacttaagatgacattctttgacaatgat-aataattttttatggtttaacattcatgcaaatggt |
38556526 |
T |
|
| Q |
101 |
gatcataattctctc-tttctcattggttgttgatttatctgaaagtccacagatgatggggttttctttgatattaatcacctctcgggaatattttca |
199 |
Q |
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||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
38556527 |
gatcataattctctcctttttcattggttgttgatttatctgaaagtccacagatgatggggttttctttgatattaatcacctctcgagaatattttca |
38556626 |
T |
|
| Q |
200 |
tccaaatttatcctctctacacacattcacaaaagaaaatttggtggtctttctcaaattccaagtcctgtattagtttcttgg |
283 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38556627 |
tccaaatttatcctctctacacacattcacacaagaaaatttggtggtctttctcaaattccaagtcctgtattagtttcttgg |
38556710 |
T |
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