View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5320_high_16 (Length: 251)
Name: NF5320_high_16
Description: NF5320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5320_high_16 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 251
Target Start/End: Original strand, 41508949 - 41509190
Alignment:
| Q |
21 |
agtataagtctaaaacatggaggggttttagatatgttacctaattccatattttgttcattaacaatgttactattttatcaataactaatatttccat |
120 |
Q |
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| T |
41508949 |
agtataagtctaaaacatggaggagttttagatatgttacctaactccatattttgttcattaacaatgttactattttatcaataactaatatttccat |
41509048 |
T |
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| Q |
121 |
caaaaa-------tgaccccgcggtctt----taggtggaatattctctcgcaaacccattttttcagttggcaaaaactctaatctaaaacattaccta |
209 |
Q |
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| T |
41509049 |
caaaaaagttaattgaccccgcggtctttctttaggtggaatattctttcgcaaacccactttttcagttggcaaaaactctaatctaaaacattaccta |
41509148 |
T |
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| Q |
210 |
aaagatctaagacaaatacactgactttgaatatgttaagtt |
251 |
Q |
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| T |
41509149 |
aaagatctaagacaaatacactgattttgaatatgttaagtt |
41509190 |
T |
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