View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5320_high_17 (Length: 248)
Name: NF5320_high_17
Description: NF5320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5320_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 41509199 - 41509417
Alignment:
| Q |
3 |
ttaataccgtacataagacacatgtggtggaagtggtcatgcaagaatttattcaggtaaacaagtgggcatgagtcgtttccattctgactctcctgcc |
102 |
Q |
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| T |
41509199 |
ttaataccgtacataagacacatgtggtggatgtggtcatgcaagaatttattcaggtaaacaagtgggcatgagtcgtttccattttctgactcctgcc |
41509298 |
T |
|
| Q |
103 |
atactataattgaatcttcacgtcacttccttctcacttttttgtttgcgtcttagaagagaatttgtggtcatcattaaaagcatgctacgtgttattc |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
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| T |
41509299 |
atactataattgaatcttcacgtcacttccttctcacttttttgtttgcgtcttagaagagaatttgtggtcatcataaaaagcatgctacgtgtgattc |
41509398 |
T |
|
| Q |
203 |
acatgattctagacctata |
221 |
Q |
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||||||||||||||||||| |
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| T |
41509399 |
acatgattctagacctata |
41509417 |
T |
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