View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5320_low_8 (Length: 349)

Name: NF5320_low_8
Description: NF5320
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5320_low_8
NF5320_low_8
[»] chr8 (8 HSPs)
chr8 (22-335)||(25391349-25391662)
chr8 (22-335)||(25358318-25358631)
chr8 (22-335)||(25677973-25678286)
chr8 (22-335)||(25617227-25617544)
chr8 (22-98)||(25494704-25494780)
chr8 (146-281)||(9229278-9229414)
chr8 (284-334)||(25494652-25494702)
chr8 (181-274)||(44300477-44300568)
[»] scaffold0466 (1 HSPs)
scaffold0466 (22-335)||(8158-8481)
[»] scaffold1041 (1 HSPs)
scaffold1041 (22-160)||(1082-1220)
[»] chr1 (2 HSPs)
chr1 (132-271)||(29360204-29360344)
chr1 (100-240)||(5716885-5717024)
[»] chr6 (4 HSPs)
chr6 (100-271)||(1094400-1094573)
chr6 (146-286)||(34249307-34249448)
chr6 (146-244)||(1090688-1090785)
chr6 (110-247)||(20728171-20728307)
[»] chr5 (3 HSPs)
chr5 (146-274)||(32743607-32743736)
chr5 (146-258)||(16098386-16098498)
chr5 (154-242)||(39777398-39777485)
[»] scaffold0009 (1 HSPs)
scaffold0009 (146-242)||(3228-3324)
[»] chr3 (1 HSPs)
chr3 (121-241)||(25079982-25080103)
[»] chr2 (1 HSPs)
chr2 (169-245)||(40709191-40709267)
[»] chr4 (1 HSPs)
chr4 (148-274)||(18982262-18982387)


Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 25391662 - 25391349
Alignment:
Q  22 aaaccattgggatacaaagtaaaaagtgagagggaaacaagatattactgttggaaatattaataggaaatagatttgggaaagatagaagagagatgat 121  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  25391662 aaaccattgggatacaaagtaaaaagcgagagggaaacaatatattactgttggaaatattaataggaaatagatttcggaaagatagaagagagatgtt 25391563  T
Q  122 gtgccgtggaaaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgta 221  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25391562 gtgccgtggaaaaagtcactaaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactatgta 25391463  T
Q  222 tctgaactcgtgcactcgaggccagcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaacttgatttttgacaa 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  25391462 tctgaactcgtgcactcgaggccagcactttggagcttcataaacaatgcccaaaataatcgagaatagaatataaaacaatgaacttgatttttgacaa 25391363  T
Q  322 cttatctgctcccc 335  Q
    ||||||||||||||    
T  25391362 cttatctgctcccc 25391349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 25358631 - 25358318
Alignment:
Q  22 aaaccattgggatacaaagtaaaaagtgagagggaaacaagatattactgttggaaatattaataggaaatagatttgggaaagatagaagagagatgat 121  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  25358631 aaaccattgggatacaaagtaaaaagcgagaggtaaacaatatattactgttggaaatattaataggaaatagattttggaaagatagaagagagatgtt 25358532  T
Q  122 gtgccgtggaaaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgta 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25358531 gtgccgtggaaaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactatgta 25358432  T
Q  222 tctgaactcgtgcactcgaggccagcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaacttgatttttgacaa 321  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  25358431 tctgaactcgtgcactcgagaccagcactttggagcttcataaacaatgcccaaaataatcgagaatagaatataaaacaatgaacttgatttttgacaa 25358332  T
Q  322 cttatctgctcccc 335  Q
    |||||||| |||||    
T  25358331 cttatctgatcccc 25358318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 25678286 - 25677973
Alignment:
Q  22 aaaccattgggatacaaagtaaaaagtgagagggaaacaagatattactgttggaaatattaataggaaatagatttgggaaagatagaagagagatgat 121  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  25678286 aaaccattgggatacaaagtaaaaagcgagagggaaacaagatattactgttggaaatattaataggaaatagatttcggaaagatagaagagagatgtt 25678187  T
Q  122 gtgccgtggaaaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgta 221  Q
    ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  25678186 gtgtcgtggaaaaagccactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctttccaaggtttacacaactacgta 25678087  T
Q  222 tctgaactcgtgcactcgaggccagcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaacttgatttttgacaa 321  Q
    |||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  25678086 tctgaactcgtgcactcgaggccagcatgttggagcttcacaaacaatgcccaaaataattgagaatagaatataaaataatgaacttgatttttgacaa 25677987  T
Q  322 cttatctgctcccc 335  Q
    ||||||||||||||    
T  25677986 cttatctgctcccc 25677973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 25617544 - 25617227
Alignment:
Q  22 aaaccattgggatacaaagtaaaaagtgagagggaaacaagatattactgttggaaatattaataggaaatagatttgggaaagatag--aagagaga-- 117  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||  |||| |||      
T  25617544 aaaccatagggatacaaagtaaaaagtgagagggaaacaagatattagcgttggaaatattaataggaaatagatttcggatagataggaaagatagaat 25617445  T
Q  118 --------tgatgtgccgtgg-aaaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggttt 208  Q
            || |||||||||  ||||||  ||| | |||||||||||||| |||||||||||||||||||||||||||| | |||||||| | || ||||    
T  25617444 attagagttgttgtgccgtgacaaaaagcaactcacatgaaagcaaatttccggtggacctccggtgcaatccaatatctgattttgctctctaaagttt 25617345  T
Q  209 acacaactacgtatctgaactcgtgcactcgaggccagcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaact 308  Q
    ||||||||||||         |||||||||||||| | ||| ||||||||||| ||||||||||||  ||||| ||||||| ||||||||||||||||||    
T  25617344 acacaactacgt---------cgtgcactcgaggctaacacgttggagcttcacaaacaatgcccaacataattgagaataaaatataaaataatgaact 25617254  T
Q  309 tgatttttgacaacttatctgctcccc 335  Q
    |||||||||||||||||||||||||||    
T  25617253 tgatttttgacaacttatctgctcccc 25617227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 25494780 - 25494704
Alignment:
Q  22 aaaccattgggatacaaagtaaaaagtgagagggaaacaagatattactgttggaaatattaataggaaatagattt 98  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25494780 aaaccattgggatacaaagtaaaaagcgagagggaaacaatatattactgttggaaatattaataggaaatagattt 25494704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 281
Target Start/End: Original strand, 9229278 - 9229414
Alignment:
Q  146 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcga-ggcc 244  Q
    |||||| ||||||||| | |||||| | ||||| ||||||||||||||||||| ||||||||||||||| | | | ||||||||||||||||  | |||     
T  9229278 tgaaagaaaattttcgatagacctcagatgcaacccaatatccggttttgctctccaaggtttacacaattgcatgtctgaactcgtgcacttaagggca 9229377  T
Q  245 agcactttggagcttcataaacaatgcccagaataat 281  Q
    | |||  |||||||||| |||||||| ||||||||||    
T  9229378 aacacaatggagcttcacaaacaatgtccagaataat 9229414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 25494702 - 25494652
Alignment:
Q  284 agaatagaatataaaataatgaacttgatttttgacaacttatctgctccc 334  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25494702 agaatagaatataaaatgatgaacttgatttttgacaacttatctgctccc 25494652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 274
Target Start/End: Complemental strand, 44300568 - 44300477
Alignment:
Q  181 caatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggccagcactttggagcttcataaacaatgccca 274  Q
    |||||||| |||||||||||||||||||||||||||| |  |||||||||||  |||||| |||| ||| ||||||| ||| |||| |||||||    
T  44300568 caatatccagttttgctccccaaggtttacacaactagg--tctgaactcgtatactcgaagccaacacgttggagcctcacaaacgatgccca 44300477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 8158 - 8481
Alignment:
Q  22 aaaccattgggatacaaagtaaaaagtgagagggaaacaagatattactgttggaaatattaataggaaatagatttgg--------gaaagatagaaga 113  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||        |||||||||||||    
T  8158 aaaccattgggatacaaagtgaaaagtgagagggaaacaagatattactgttggaaatattaataggaaatag-ttcggatagatacgaaagatagaaga 8256  T
Q  114 gagatgatgtgccgtggaaaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacaca 213  Q
    ||| || || ||||||| |||||  ||||  |||||||||||||| |  |||||||| ||||||||  |||||||||||||||||||||| |||||||||    
T  8257 gagttgttgcgccgtggcaaaagcaactgccatgaaagcaaatttccaatggacctctggtgcaatttaatatccggttttgctccccaatgtttacaca 8356  T
Q  214 actacgtatctgaactcgtgcactcgaggccagcactttggagcttcataaacaatgcccagaataatcgagaatagaatataaaataatgaacttgatt 313  Q
    ||||||| |||||||||||||||| ||||| ||||| ||||||||||| ||||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  8357 actacgtgtctgaactcgtgcacttgaggctagcacgttggagcttcacaaacaatacccaaaataattgagaatagaatataaaataatgaacttgatt 8456  T
Q  314 tttgacaac---ttatctgctcccc 335  Q
    |||||||||   |||||||||||||    
T  8457 tttgacaactaattatctgctcccc 8481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1041 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold1041
Description:

Target: scaffold1041; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 1082 - 1220
Alignment:
Q  22 aaaccattgggatacaaagtaaaaagtgagagggaaacaagatattactgttggaaatattaataggaaatagatttgggaaagatagaagagagatgat 121  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |    
T  1082 aaaccattgggatacaaagtaaaaagcgagagggaaacaagatattactgttgaaaatattattaggaaatagatttcggaaagatagaagagagatgtt 1181  T
Q  122 gtgccgtggaaaaagtcactgaaatgaaagcaaattttc 160  Q
    |  |||||||||||| |||||||||||||||||||||||    
T  1182 gcaccgtggaaaaagccactgaaatgaaagcaaattttc 1220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 29360344 - 29360204
Alignment:
Q  132 aaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcg 231  Q
    |||||||||||   ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||| |||||| |||    
T  29360344 aaaagtcactgccttgaaagcaaattttcggtggacctccggtgcaacccaatatccgattttgctcctcaaggtttacacaactgcgtgtctgaattcg 29360245  T
Q  232 tgcactcgaggcc-agcactttggagcttcataaacaatgc 271  Q
    |||||| |||||| | |||  ||||||||||||||||||||    
T  29360244 tgcacttgaggccaaacacgatggagcttcataaacaatgc 29360204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 240
Target Start/End: Complemental strand, 5717024 - 5716885
Alignment:
Q  100 ggaaagatagaagagagatgatgtgccgtggaaaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctcc 199  Q
    ||||||||||||||||| || |||||||||| ||||  |||||   |||| |||||||| ||||| || |||||||||| ||||  |||| |||||||||    
T  5717024 ggaaagatagaagagagttgttgtgccgtggtaaaaaccactgccctgaatgcaaatttccggtgtacttccggtgcaacccaa-gtccgattttgctcc 5716926  T
Q  200 ccaaggtttacacaactacgtatctgaactcgtgcactcga 240  Q
    ||||  ||||||||||| ||| ||| ||||| | |||||||    
T  5716925 ccaaaatttacacaactgcgtgtctaaactcatccactcga 5716885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 2e-37; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 100 - 271
Target Start/End: Original strand, 1094400 - 1094573
Alignment:
Q  100 ggaaagatagaagagagatgatgtgccgtggaaaaagtcactgaaatgaaagcaaattttcggtggacctccgg-tgcaatccaatatccggttttgctc 198  Q
    ||||||||||||||||| || |||||||||  |||||||||||   ||||||||||||||||||||| |||||| ||||| |||| ||||||||||||||    
T  1094400 ggaaagatagaagagagttgttgtgccgtgacaaaagtcactgtcctgaaagcaaattttcggtggatctccgggtgcaacccaa-atccggttttgctc 1094498  T
Q  199 cccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc--agcactttggagcttcataaacaatgc 271  Q
    || ||||||||||||||| ||| | |||||||||||||||||||||  | |||  |||||||||| |||||||||    
T  1094499 cctaaggtttacacaactgcgtgtgtgaactcgtgcactcgaggcctgaacacgatggagcttcacaaacaatgc 1094573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 286
Target Start/End: Complemental strand, 34249448 - 34249307
Alignment:
Q  146 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgag-gcc 244  Q
    |||||| ||||||||||||||||||| ||||||  || ||||| ||||||||||||||| |||||| |||| | | ||||||||||||||||||||  |     
T  34249448 tgaaagaaaattttcggtggacctccagtgcaactcattatccagttttgctccccaagatttacataactgcatgtctgaactcgtgcactcgagatca 34249349  T
Q  245 agcactttggagcttcataaacaatgcccagaataatcgaga 286  Q
    | |||  ||||||||||||||||||||||| |||||| ||||    
T  34249348 aacacgatggagcttcataaacaatgcccaaaataatagaga 34249307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 146 - 244
Target Start/End: Original strand, 1090688 - 1090785
Alignment:
Q  146 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc 244  Q
    ||||||| |||||||| ||||||| | |||||| |||| |||||||||| ||||||||| ||||||||||||||| ||||||||||  |||||||||||    
T  1090688 tgaaagctaattttcgatggaccttcagtgcaacccaa-atccggttttactccccaagatttacacaactacgtgtctgaactcggacactcgaggcc 1090785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 110 - 247
Target Start/End: Original strand, 20728171 - 20728307
Alignment:
Q  110 aagagagatgatgtgccgtggaaaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggttta 209  Q
    ||||||| || |||||||||  |||||||||||   | ||||||||||| |||||||| ||||||| || | || || | ||||||||| ||||  ||||    
T  20728171 aagagagttgttgtgccgtgacaaaagtcactggtttaaaagcaaatttccggtggacttccggtgtaacctaaaattcagttttgctctccaaaattta 20728270  T
Q  210 cacaactacgtatctgaactcgtgcactcgaggccagc 247  Q
    ||||||||||| | |||| | |||||||||||||||||    
T  20728271 cacaactacgtgtttgaa-ttgtgcactcgaggccagc 20728307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 274
Target Start/End: Original strand, 32743607 - 32743736
Alignment:
Q  146 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcc- 244  Q
    ||||||||||||| ||||||||||||| ||||||| ||| ||| | ||||||||||||||||||||||||| | | ||||||||| |||||| ||||||     
T  32743607 tgaaagcaaatttccggtggacctccgatgcaatctaatttcctgatttgctccccaaggtttacacaactgcttgtctgaactcatgcacttgaggcca 32743706  T
Q  245 agcactttggagcttcataaacaatgccca 274  Q
    | |||  |||||||||| ||||||| ||||    
T  32743707 aacacgatggagcttcacaaacaataccca 32743736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 146 - 258
Target Start/End: Original strand, 16098386 - 16098498
Alignment:
Q  146 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcca 245  Q
    |||||||||| || ||||||| |||| ||||||| ||||| ||||||||||||  ||| |||||||||||||||| | ||||||||| ||||||||||||    
T  16098386 tgaaagcaaaattccggtggatctccagtgcaattcaataaccggttttgctcttcaaagtttacacaactacgtgtgtgaactcgttcactcgaggcca 16098485  T
Q  246 gcactttggagct 258  Q
     ||| ||||||||    
T  16098486 acacgttggagct 16098498  T

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Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 39777485 - 39777398
Alignment:
Q  154 aattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgagg 242  Q
    ||||||||||||||||||||| ||| |||  ||||||||||||||||||| |||||||||||| ||| | |||||   |||||||||||    
T  39777485 aattttcggtggacctccggtacaacccag-atccggttttgctccccaaagtttacacaactgcgtgtttgaacctatgcactcgagg 39777398  T

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Target: scaffold0009 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 3228 - 3324
Alignment:
Q  146 tgaaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgagg 242  Q
    |||||||||||||| |||| | |||||||||||| ||||||||| |||| |||| ||||||||| |||| | ||| ||||||| |||||||||||||    
T  3228 tgaaagcaaatttttggtgaaactccggtgcaattcaatatccgattttactcctcaaggtttatacaatttcgtgtctgaacccgtgcactcgagg 3324  T

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Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 25079982 - 25080103
Alignment:
Q  121 tgtgccgtggaaaaagtcactgaaatgaaagcaaattttcggtggacctccggtgcaatccaatatcc-ggttttgctccccaaggtttacacaactacg 219  Q
    ||||| |||| ||||| |||||   ||||||||||||| || |||||||||||||||| |||||| || |||||| ||||  ||||||||||||| |  |    
T  25079982 tgtgcagtggcaaaagccactgctctgaaagcaaatttccgctggacctccggtgcaacccaatacccgggtttttctccgtaaggtttacacaattgtg 25080081  T
Q  220 tatctgaactcgtgcactcgag 241  Q
    | ||||||||||||||||||||    
T  25080082 tgtctgaactcgtgcactcgag 25080103  T

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Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 40709267 - 40709191
Alignment:
Q  169 tccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggcca 245  Q
    |||||||||| |||||||||||||||||||||||| |||||||  ||| | | ||||||| | ||||||||||||||    
T  40709267 tccggtgcaacccaatatccggttttgctccccaaagtttacattactgcatgtctgaacccatgcactcgaggcca 40709191  T

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Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 274
Target Start/End: Original strand, 18982262 - 18982387
Alignment:
Q  148 aaagcaaattttcggtggacctccggtgcaatccaatatccggttttgctccccaaggtttacacaactacgtatctgaactcgtgcactcgaggccagc 247  Q
    |||||||||||||| | |||||||| |  ||||| |||| || ||||||||| ||| | ||||  ||||| || ||||| | ||||||||||||| || |    
T  18982262 aaagcaaattttcgatagacctccgatataatcccatattcgattttgctcctcaaaggttacgtaactatgtgtctgacc-cgtgcactcgaggtcaac 18982360  T
Q  248 actttggagcttcataaacaatgccca 274  Q
    || ||||||||||| ||||||| ||||    
T  18982361 acattggagcttcacaaacaataccca 18982387  T

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