View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5324-Insertion-4 (Length: 616)

Name: NF5324-Insertion-4
Description: NF5324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5324-Insertion-4
NF5324-Insertion-4
[»] chr3 (34 HSPs)
chr3 (10-616)||(13646829-13647433)
chr3 (335-426)||(18770-18861)
chr3 (335-426)||(34060748-34060840)
chr3 (335-398)||(51817323-51817386)
chr3 (513-606)||(8751790-8751883)
chr3 (335-391)||(18946-19002)
chr3 (335-411)||(4759848-4759924)
chr3 (335-386)||(8715524-8715575)
chr3 (335-386)||(9067411-9067462)
chr3 (335-418)||(37509146-37509229)
chr3 (335-405)||(49976145-49976215)
chr3 (435-491)||(21789645-21789701)
chr3 (335-398)||(8847463-8847526)
chr3 (363-426)||(27863985-27864048)
chr3 (335-418)||(32415604-32415687)
chr3 (335-418)||(35306367-35306450)
chr3 (335-398)||(39436500-39436563)
chr3 (335-418)||(44570377-44570460)
chr3 (488-606)||(29678496-29678613)
chr3 (335-423)||(45899529-45899618)
chr3 (337-426)||(46160549-46160638)
chr3 (337-405)||(8498039-8498107)
chr3 (335-422)||(39974792-39974880)
chr3 (335-382)||(11317001-11317048)
chr3 (335-398)||(36730164-36730227)
chr3 (335-386)||(52570817-52570868)
chr3 (335-393)||(10854894-10854952)
chr3 (335-405)||(26850498-26850568)
chr3 (335-373)||(34750293-34750331)
chr3 (278-319)||(34060852-34060893)
chr3 (335-392)||(46317521-46317578)
chr3 (435-487)||(5925598-5925650)
chr3 (335-391)||(12051073-12051129)
chr3 (335-399)||(21324551-21324613)
[»] chr4 (44 HSPs)
chr4 (335-424)||(35675175-35675264)
chr4 (337-426)||(40593638-40593727)
chr4 (335-414)||(19876178-19876257)
chr4 (335-426)||(30617984-30618075)
chr4 (335-398)||(34016660-34016723)
chr4 (335-418)||(35808387-35808470)
chr4 (335-418)||(55669774-55669857)
chr4 (335-426)||(13498100-13498191)
chr4 (335-418)||(23765613-23765696)
chr4 (335-426)||(31010410-31010501)
chr4 (335-426)||(31494644-31494735)
chr4 (336-405)||(27545899-27545967)
chr4 (335-400)||(51018388-51018453)
chr4 (335-418)||(26040351-26040434)
chr4 (335-418)||(31487756-31487839)
chr4 (335-398)||(33951735-33951798)
chr4 (335-386)||(35511203-35511254)
chr4 (335-418)||(41956204-41956287)
chr4 (336-418)||(31168170-31168252)
chr4 (335-423)||(35927260-35927348)
chr4 (335-386)||(19328951-19329002)
chr4 (335-398)||(20811298-20811361)
chr4 (335-418)||(32131177-32131260)
chr4 (335-418)||(51266959-51267042)
chr4 (336-418)||(2362667-2362749)
chr4 (335-424)||(23260739-23260829)
chr4 (335-384)||(3769848-3769897)
chr4 (335-392)||(20435807-20435864)
chr4 (335-399)||(30199796-30199860)
chr4 (335-418)||(34316713-34316797)
chr4 (335-399)||(52021067-52021131)
chr4 (335-418)||(27839297-27839380)
chr4 (335-398)||(45688778-45688841)
chr4 (335-398)||(50514625-50514687)
chr4 (335-406)||(52895759-52895830)
chr4 (342-404)||(9459935-9459997)
chr4 (372-405)||(3929817-3929850)
chr4 (335-392)||(30475460-30475517)
chr4 (335-372)||(46823507-46823544)
chr4 (335-396)||(52341636-52341697)
chr4 (335-400)||(55120126-55120191)
chr4 (338-426)||(11996087-11996174)
chr4 (523-603)||(30546734-30546814)
chr4 (335-399)||(42627109-42627173)
[»] chr2 (27 HSPs)
chr2 (335-423)||(11659297-11659385)
chr2 (335-418)||(765141-765224)
chr2 (335-405)||(34220650-34220720)
chr2 (335-426)||(2239617-2239708)
chr2 (335-406)||(37230255-37230326)
chr2 (335-418)||(39401526-39401608)
chr2 (335-393)||(862624-862682)
chr2 (335-414)||(12695231-12695312)
chr2 (336-405)||(2805419-2805488)
chr2 (337-397)||(2136473-2136533)
chr2 (338-418)||(16361604-16361684)
chr2 (335-418)||(1321203-1321286)
chr2 (335-398)||(2966575-2966638)
chr2 (335-398)||(33864390-33864453)
chr2 (335-405)||(8327015-8327085)
chr2 (335-384)||(747516-747565)
chr2 (335-392)||(6999237-6999294)
chr2 (335-391)||(13997922-13997978)
chr2 (435-487)||(29994517-29994569)
chr2 (342-386)||(41890142-41890186)
chr2 (335-411)||(44299679-44299755)
chr2 (336-398)||(35445301-35445363)
chr2 (335-393)||(39085808-39085866)
chr2 (336-386)||(43972031-43972081)
chr2 (337-386)||(10522828-10522877)
chr2 (335-391)||(30831653-30831709)
chr2 (338-418)||(33726418-33726498)
[»] chr5 (32 HSPs)
chr5 (334-418)||(4421955-4422039)
chr5 (336-418)||(35653246-35653328)
chr5 (335-426)||(3015033-3015124)
chr5 (335-417)||(25017283-25017365)
chr5 (335-416)||(38610285-38610366)
chr5 (335-391)||(35945281-35945337)
chr5 (335-426)||(678485-678576)
chr5 (335-398)||(1479147-1479210)
chr5 (339-418)||(15915871-15915950)
chr5 (335-398)||(27823294-27823357)
chr5 (335-398)||(43414075-43414138)
chr5 (335-412)||(1759852-1759929)
chr5 (335-399)||(3241963-3242027)
chr5 (335-391)||(12068192-12068248)
chr5 (335-406)||(5151524-5151595)
chr5 (335-406)||(17168711-17168782)
chr5 (335-418)||(34546813-34546896)
chr5 (335-398)||(38508040-38508103)
chr5 (335-426)||(39335508-39335599)
chr5 (335-418)||(39567938-39568021)
chr5 (335-423)||(39069264-39069350)
chr5 (335-387)||(12914210-12914262)
chr5 (350-398)||(16315545-16315593)
chr5 (335-399)||(20184558-20184622)
chr5 (336-400)||(24107539-24107602)
chr5 (335-398)||(3639086-3639149)
chr5 (336-391)||(4962534-4962589)
chr5 (335-406)||(28599657-28599728)
chr5 (335-394)||(37243882-37243941)
chr5 (344-394)||(27535139-27535189)
chr5 (335-387)||(10406822-10406874)
chr5 (278-310)||(28782666-28782698)
[»] chr7 (37 HSPs)
chr7 (488-606)||(25121825-25121942)
chr7 (335-418)||(40763284-40763367)
chr7 (335-406)||(41188789-41188860)
chr7 (516-606)||(6216373-6216463)
chr7 (499-601)||(43783034-43783135)
chr7 (335-412)||(36279154-36279231)
chr7 (335-386)||(32204217-32204268)
chr7 (335-398)||(42222256-42222319)
chr7 (335-418)||(43567497-43567580)
chr7 (335-414)||(48454817-48454896)
chr7 (360-405)||(9887207-9887252)
chr7 (435-491)||(6216602-6216658)
chr7 (335-411)||(8292780-8292856)
chr7 (335-415)||(8380476-8380556)
chr7 (338-426)||(31360275-31360363)
chr7 (335-423)||(35003640-35003727)
chr7 (335-399)||(40774252-40774316)
chr7 (335-418)||(1910279-1910361)
chr7 (335-394)||(22707084-22707143)
chr7 (335-398)||(29034722-29034785)
chr7 (335-398)||(30538491-30538554)
chr7 (335-393)||(5240348-5240406)
chr7 (335-393)||(27053509-27053567)
chr7 (342-423)||(41769634-41769715)
chr7 (335-371)||(29687511-29687547)
chr7 (335-411)||(49069590-49069666)
chr7 (335-398)||(3681729-3681792)
chr7 (335-386)||(5347995-5348046)
chr7 (335-398)||(7322964-7323027)
chr7 (339-398)||(22521625-22521684)
chr7 (335-398)||(24359719-24359782)
chr7 (342-405)||(38977167-38977230)
chr7 (335-398)||(46478567-46478629)
chr7 (435-464)||(25121662-25121691)
chr7 (335-400)||(44391030-44391095)
chr7 (335-367)||(5977757-5977789)
chr7 (335-411)||(40066915-40066991)
[»] chr8 (21 HSPs)
chr8 (335-418)||(4989968-4990051)
chr8 (335-418)||(19389301-19389384)
chr8 (343-406)||(7532828-7532891)
chr8 (335-398)||(18068997-18069060)
chr8 (335-418)||(5129447-5129530)
chr8 (335-426)||(11332777-11332868)
chr8 (335-398)||(26195384-26195447)
chr8 (335-399)||(6841706-6841770)
chr8 (335-398)||(8018796-8018859)
chr8 (335-386)||(25249364-25249415)
chr8 (335-426)||(39972135-39972226)
chr8 (335-412)||(38870039-38870116)
chr8 (335-418)||(35930171-35930254)
chr8 (335-398)||(45338039-45338102)
chr8 (337-399)||(24304978-24305040)
chr8 (335-392)||(6939193-6939250)
chr8 (278-319)||(11264411-11264452)
chr8 (335-400)||(20169320-20169385)
chr8 (335-399)||(26892821-26892885)
chr8 (335-399)||(31596431-31596495)
chr8 (335-407)||(44874360-44874432)
[»] chr1 (40 HSPs)
chr1 (335-418)||(28850898-28850981)
chr1 (335-418)||(34874602-34874685)
chr1 (335-417)||(7190464-7190546)
chr1 (335-418)||(11385798-11385881)
chr1 (335-426)||(14331872-14331963)
chr1 (335-426)||(43168176-43168267)
chr1 (335-426)||(44359652-44359743)
chr1 (335-418)||(49508722-49508804)
chr1 (335-398)||(49901961-49902024)
chr1 (335-412)||(2125701-2125778)
chr1 (335-424)||(41492944-41493032)
chr1 (335-411)||(50295428-50295504)
chr1 (335-398)||(4940748-4940811)
chr1 (335-426)||(16691329-16691420)
chr1 (342-405)||(42064502-42064565)
chr1 (335-392)||(6170565-6170622)
chr1 (335-418)||(27209709-27209792)
chr1 (335-398)||(33930001-33930064)
chr1 (335-398)||(40845286-40845349)
chr1 (335-418)||(41147466-41147549)
chr1 (335-386)||(41898879-41898930)
chr1 (335-418)||(43433810-43433893)
chr1 (335-393)||(11386016-11386074)
chr1 (343-392)||(40742636-40742685)
chr1 (335-405)||(40920220-40920292)
chr1 (335-391)||(4656051-4656107)
chr1 (335-406)||(17402983-17403054)
chr1 (335-418)||(22346225-22346308)
chr1 (335-398)||(28277490-28277553)
chr1 (335-398)||(32213897-32213960)
chr1 (335-398)||(42607332-42607395)
chr1 (335-398)||(47655379-47655442)
chr1 (351-406)||(48938686-48938741)
chr1 (335-386)||(51424192-51424243)
chr1 (335-397)||(8892780-8892842)
chr1 (335-393)||(26469595-26469653)
chr1 (335-413)||(45721787-45721865)
chr1 (335-412)||(932151-932228)
chr1 (335-391)||(5945455-5945511)
chr1 (335-399)||(27210760-27210824)
[»] chr6 (15 HSPs)
chr6 (335-418)||(29692332-29692415)
chr6 (335-411)||(12191528-12191604)
chr6 (335-399)||(27127517-27127581)
chr6 (335-386)||(7875204-7875255)
chr6 (335-418)||(10855467-10855550)
chr6 (335-400)||(6507398-6507463)
chr6 (335-424)||(28014670-28014759)
chr6 (335-411)||(6866950-6867026)
chr6 (335-418)||(5578309-5578392)
chr6 (335-386)||(7880450-7880501)
chr6 (335-406)||(28541991-28542062)
chr6 (337-391)||(14232509-14232563)
chr6 (278-319)||(31490776-31490817)
chr6 (278-319)||(32251335-32251376)
chr6 (343-399)||(13000173-13000229)
[»] scaffold0144 (1 HSPs)
scaffold0144 (335-392)||(39622-39679)
[»] scaffold0004 (2 HSPs)
scaffold0004 (513-606)||(243695-243788)
scaffold0004 (435-491)||(245225-245281)
[»] scaffold0809 (1 HSPs)
scaffold0809 (342-393)||(4286-4337)
[»] scaffold0062 (3 HSPs)
scaffold0062 (335-398)||(16783-16845)
scaffold0062 (335-398)||(26951-27013)
scaffold0062 (335-398)||(37117-37179)


Alignment Details
Target: chr3 (Bit Score: 437; Significance: 0; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 10 - 616
Target Start/End: Complemental strand, 13647433 - 13646829
Alignment:
Q  10 ggtatggctaatttctctaannnnnnnatactagtgttgattattccattgatcatgtgattttctttgtgtgcttcaagggttctaacaattcaggcta 109  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13647433 ggtatggctaatttctctaatttttttatactagtgttgattattccattgatcatgtgattttctttgtgtgcttcaagggttctaacaattcaggcta 13647334  T
Q  110 tcactttttcctctctttgtatcaatattcctaattttgtataaggactttggattctttttatctatatgtgttttttattcatgcattctttgagttt 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13647333 tcactttttcctctctttgtatcaatattcctaattttgtataaggactttggattctttttatctatatgtgttttttatttatgcattctttgagttt 13647234  T
Q  210 tgaagaatattaataatggatcgacctggattgacatctaccttcaataggggtggtatattacatgataaggaaattaaaagtagtaggtttgtattga 309  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||||||||||| ||||||    
T  13647233 tgaagaatattcataatggatcgacctggattgacatctaccttcaacaggggtggtatattacttgataa-gaaaccaaaagtagtaggtttatattga 13647135  T
Q  310 attcaacaatgnnnnnnnnnnnnagtaaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctcc 409  Q
    |||||||||||            ||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||| |    
T  13647134 attcaacaatg-ttttaatttttagtaaaaagttaaattcatcacttttcactatttttcaatccaatatttctatttttatcctcttaacaaatgcttc 13647036  T
Q  410 aagggcaatctttagcannnnnnnnacaaaagcaaaattaactcatatcattaattagaaaaagtttaatacaaaaaggagataattgattattaataac 509  Q
    || ||||||||||| ||        ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13647035 aaaggcaatctttaacattttttttacaaaagcaaaattaactcatatcattaattaggaaaagtttaatacaaaaaggagataattgattattaataac 13646936  T
Q  510 caaaaagtagcatataaaattcaggaactctgttacgatgagacaatagagaattcataggagtgcacaaatccgactcaaaaaagacattgtgccaccg 609  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||||||||||||||     
T  13646935 caaaaagtagcatataaaattcaggaactctgttacgatgagacaatagagaattcacaggagtgcacaatttcgactgaaaaaagacattgtgccaccc 13646836  T
Q  610 atttatg 616  Q
    |||||||    
T  13646835 atttatg 13646829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 18861 - 18770
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||||||||||| ||||| | ||||||| |||||||||    
T  18861 taaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttttatcctcttaaccaatgccctaagggcactctttagca 18770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 34060840 - 34060748
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttcta-ttcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||||| || || ||||| ||||||| ||||| |||||| || |||||||||    
T  34060840 taaaaagttaaattcatcacttttcaccatttttcaatacaatatttttattttttatcttcttaaccaatgcaccaaggacactctttagca 34060748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 51817386 - 51817323
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||| |||| |||||||||||    
T  51817386 taaaaagttaaatttatcacttttcaccattttccaatgctatatttttatttttatcctctta 51817323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 513 - 606
Target Start/End: Original strand, 8751790 - 8751883
Alignment:
Q  513 aaagtagcatataaaattcaggaactctgttacgatgagacaatagagaattcataggagtgcacaaatccgactcaaaaaagacattgtgcca 606  Q
    ||||||||||||||||||||| ||||| | |||| ||||| ||||||||||| | | |||||||  ||||||||| |||||  |||||||||||    
T  8751790 aaagtagcatataaaattcagaaactccgatacgctgagataatagagaattaacaagagtgcatgaatccgactaaaaaattacattgtgcca 8751883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 19002 - 18946
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    |||||||||||||||||||||||||||  ||| ||||||||||||||||||| ||||    
T  19002 taaaaagttaaattcatcacttttcaccgtttcccaatgcaatatttctatttttat 18946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 4759924 - 4759848
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaa 411  Q
    |||||||||||||| |||||||||||| ||||| |||||| ||||||||||| ||||||  ||| | ||||||||||    
T  4759924 taaaaagttaaatttatcacttttcaccatttttcaatgctatatttctatttttatccctttatccaatgctccaa 4759848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 8715575 - 8715524
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  8715575 taaaaagttaaatttatcacttttcaccattttccaatgctatatttctatt 8715524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 9067462 - 9067411
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||||    
T  9067462 taaaaagttaaatttatcacttttcaccattttccaatgctatatttctatt 9067411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 37509146 - 37509229
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||||||||||||||||   ||||| ||| |||||| |||| | ||||| |||| ||||||    
T  37509146 taaaaagttaaatttatcacttttcactattttccaatgctgcatttcaatttttatccccttatccaatgccccaaaggcaat 37509229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 49976215 - 49976145
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    ||||||||||||||||||||||||||| |||   |||| ||||| ||||||| |||||||| |||||||||    
T  49976215 taaaaagttaaattcatcacttttcaccattagtcaatacaataattctatttttatcctcctaacaaatg 49976145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 491
Target Start/End: Original strand, 21789645 - 21789701
Alignment:
Q  435 acaaaagcaaaattaactcatatcattaattagaaaaagtttaatacaaaaaggaga 491  Q
    |||||||||||||||||||||||||||||| || ||| ||| |||||| ||||||||    
T  21789645 acaaaagcaaaattaactcatatcattaataaggaaaggttcaatacataaaggaga 21789701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 8847526 - 8847463
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| ||||||||| || |||||||||||  ||||||||||| |||||| ||||    
T  8847526 taaaaagttaaattaatcactttttaccattttccaatgttatatttctatttttatcccctta 8847463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 363 - 426
Target Start/End: Complemental strand, 27864048 - 27863985
Alignment:
Q  363 attttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||||||||| || ||||||||||||| |||||   ||||||| |||||||||    
T  27864048 attttccaatgcaatatttctttttttatcctcttaaccaatgccttaagggcactctttagca 27863985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 32415604 - 32415687
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| || ||||||||| ||||| |||||| ||||||||||| ||||||  ||| | |||||  ||||||||||    
T  32415604 taaaaagttaaatttatgacttttcacaatttttcaatgctatatttctatttttatccctttatccaatgcctcaagggcaat 32415687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 35306367 - 35306450
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||  |||||||||||  ||||||||||| |||||| |||| | |||   |||||||||||    
T  35306367 taaaaagttaaatttatcacttttcatcattttccaatgttatatttctatttttatccccttatccaattgcccaagggcaat 35306450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 39436500 - 39436563
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    ||||||||||||||| | | ||||||| ||||| |||| ||||||||||||| |||||||||||    
T  39436500 taaaaagttaaattctttatttttcaccatttttcaatacaatatttctatttttatcctctta 39436563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 44570460 - 44570377
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||| | |||||||||||| |||||||||||  ||||||||||| | ||||  ||| | ||||| |||||||||||    
T  44570460 taaaaagttaaagttatcacttttcaccattttccaatgttatatttctattttgatccctttatcgaatgccccaagggcaat 44570377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 606
Target Start/End: Original strand, 29678496 - 29678613
Alignment:
Q  488 gagataattgattattaataaccaaaaagtagcatataaaattcaggaactctgttacgatgagacaatagagaattcataggagtgcacaaatccgact 587  Q
    |||||| ||| |||||||||||| ||| |||||||||||||||||| |||||   |||| ||||| ||||  ||| ||| | |||| |||||||| || |    
T  29678496 gagatagttggttattaataaccgaaa-gtagcatataaaattcagaaactcctctacgctgagataataatgaaatcacaagagtacacaaatctgatt 29678594  T
Q  588 caaaaaagacattgtgcca 606  Q
     ||||| ||||||||||||    
T  29678595 aaaaaatgacattgtgcca 29678613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 45899618 - 45899529
Alignment:
Q  335 taaaaagttaaattcatcactttt-cactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatcttta 423  Q
    |||||| ||||||||||||||||| ||  ||||||||||  |||||||||||| |||| |||||| | ||||| ||||| ||| ||||||    
T  45899618 taaaaatttaaattcatcactttttcatcattttccaatataatatttctatttttattctcttatccaatgccccaagagcactcttta 45899529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 337 - 426
Target Start/End: Original strand, 46160549 - 46160638
Alignment:
Q  337 aaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    |||||||| |||||||||||||||| |  |  || || |||||||||||| ||||||||||||| ||||| | || |||| |||||||||    
T  46160549 aaaagttacattcatcacttttcaccacctctcagtgaaatatttctatttttatcctcttaactaatgccctaaaggcactctttagca 46160638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 8498107 - 8498039
Alignment:
Q  337 aaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    |||||||||||||| | |||||||| ||||| | ||| |||||||||||| ||||||| ||||| ||||    
T  8498107 aaaagttaaattcaacgcttttcaccatttttcgatgtaatatttctatttttatccttttaaccaatg 8498039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 422
Target Start/End: Complemental strand, 39974880 - 39974792
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattctt-atcctcttaacaaatgctccaagggcaatcttt 422  Q
    |||||||||||||||||||||| |||  |||||| |||||||||||| |||| || ||||| | ||| |||| ||||||| || |||||    
T  39974880 taaaaagttaaattcatcacttctcatcattttctaatgcaatatttttatttttgatcctttcaaccaatgttccaaggacactcttt 39974792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 382
Target Start/End: Original strand, 11317001 - 11317048
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttc 382  Q
    ||||||||||||||||| ||||||||| |||||||||  |||||||||    
T  11317001 taaaaagttaaattcataacttttcaccattttccaaaacaatatttc 11317048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 36730227 - 36730164
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| ||||| |||| | |||||| |||| |||||| ||||    
T  36730227 taaaaagttaaatttatcacttttcaccatttttcaatactatatttatatttttatcccctta 36730164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 386
Target Start/End: Original strand, 52570817 - 52570868
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||| ||| |||||||||||| |||||||||| | |||||||||||    
T  52570817 taaaaagttatatttatcacttttcaccattttccaatactatatttctatt 52570868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 10854894 - 10854952
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcc 393  Q
    |||||||||||||| || | ||||||| |||||||||||| ||||||||| | ||||||    
T  10854894 taaaaagttaaatttattagttttcaccattttccaatgctatatttctacttttatcc 10854952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 26850568 - 26850498
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    |||||| ||||||||||||||||| || |||||| |||  ||||||| |||| ||||||| ||||| ||||    
T  26850568 taaaaaattaaattcatcactttttaccattttctaatataatatttatatttttatcctattaaccaatg 26850498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 373
Target Start/End: Complemental strand, 34750331 - 34750293
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatg 373  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  34750331 taaaaagttaaattcatcacttttcaccagtttccaatg 34750293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 34060893 - 34060852
Alignment:
Q  278 taaggaaattaaaagtagtaggtttgtattgaattcaacaat 319  Q
    |||||||||||||||||||  ||||| |||||||||||||||    
T  34060893 taaggaaattaaaagtagtttgtttgcattgaattcaacaat 34060852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 46317521 - 46317578
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatc 392  Q
    |||||||||||||| |||| ||||||  |||||||||||  ||||||||||| |||||    
T  46317521 taaaaagttaaatttatcatttttcatcattttccaatgttatatttctatttttatc 46317578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 487
Target Start/End: Original strand, 5925598 - 5925650
Alignment:
Q  435 acaaaagcaaaattaactcatatcattaattagaaaaagtttaatacaaaaag 487  Q
    ||||||||||||||||||| |||||||||| || ||  ||| |||||||||||    
T  5925598 acaaaagcaaaattaactcgtatcattaataaggaagggttcaatacaaaaag 5925650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 12051073 - 12051129
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    |||||||||||||| |||| |||||| |||||| |||| | ||||||||||| ||||    
T  12051073 taaaaagttaaatttatcatttttcattattttacaatactatatttctatttttat 12051129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 21324551 - 21324613
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    |||||||||||||  |||||||||||  |||| ||||||||||||||||||| |||||| |||||    
T  21324551 taaaaagttaaatctatcacttttcatcattt-ccaatgcaatatttctatt-ttatccgcttaa 21324613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 335 - 424
Target Start/End: Complemental strand, 35675264 - 35675175
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttag 424  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||| ||||| ||||||||| |||||||    
T  35675264 taaaaagttaaattcatcacttttcactatttcccaatacaatatttctatttttatcgtcttaaccaatgccccaagggcagtctttag 35675175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 337 - 426
Target Start/End: Original strand, 40593638 - 40593727
Alignment:
Q  337 aaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||   ||| | ||||  ||||||||||||||| |||||||||    
T  40593638 aaaagttaaattcatcacttttcactatttcccaatacaatatttctatttcaatctttttaatcaatgctccaagggcactctttagca 40593727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 414
Target Start/End: Complemental strand, 19876257 - 19876178
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaaggg 414  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||| |||| | |||||| ||||||    
T  19876257 taaaaagttaaatttatcacttttcactattttccaatactatatttctatttttatccccttatccaatgcttcaaggg 19876178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 30617984 - 30618075
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    |||||||||||||||||  |||||||  |||| ||||||||||||||||||  ||||||||||||| ||||| | ||||||| |||||||||    
T  30617984 taaaaagttaaattcattgcttttcatcatttcccaatgcaatatttctatgtttatcctcttaaccaatgccctaagggcactctttagca 30618075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 34016660 - 34016723
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||| ||||    
T  34016660 taaaaagttaaattcatcacttttcaccattttccaatgctatatttctatttttatcccctta 34016723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 35808470 - 35808387
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||| ||||||| |||||||||||| ||||||||||| |||||| |||| | ||||| |||||||||||    
T  35808470 taaaaagttaaatttatcatttttcacaattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaat 35808387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 55669774 - 55669857
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||| ||||||| |||||||||||| ||||||||||| |||||| |||| | ||||| |||||||||||    
T  55669774 taaaaagttaaatttatcatttttcaccattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaat 55669857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 13498191 - 13498100
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||||||  | || ||||||||||||| ||||||||||||| ||||| ||||||| |||||  ||||| || |||||||||    
T  13498191 taaaaagttaaattcatcgttctttactattttccaatacaatatttctatttttatcatcttaaccaatgcatcaaggacactctttagca 13498100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 23765613 - 23765696
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||| ||| |||||| |||| | ||||| |||| ||||||    
T  23765613 taaaaagttaaatttatcacttttcaccattttccaatgctatatttcaatttttatccccttatctaatgcaccaaaggcaat 23765696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 31010501 - 31010410
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||| |||||||| |  ||||  |||| |||| |||||||| ||||| ||||||| ||||||||||||||| |||||||||    
T  31010501 taaaaagttaaattcttcactttttatcatttctcaatacaatgtttctatttttatcatcttaaccaatgctccaagggcactctttagca 31010410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 31494735 - 31494644
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||| ||||||||||| |||| | ||| |||| |||||||| ||||| ||||||| ||||| ||||| ||| |||||||||    
T  31494735 taaaaagttaaattcttcacttttcaccatttccaaatacaatgtttctatttttatcatcttaactaatgccccaagagcactctttagca 31494644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 336 - 405
Target Start/End: Original strand, 27545899 - 27545967
Alignment:
Q  336 aaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    |||||||||||||||||||||||  | ||||| |||||||||||||||||| |||||||||||| |||||    
T  27545899 aaaaagttaaattcatcacttttatc-atttttcaatgcaatatttctatttttatcctcttaataaatg 27545967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 400
Target Start/End: Complemental strand, 51018453 - 51018388
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaac 400  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||| |||||||| ||||| |||||||    
T  51018453 taaaaagttaaattcttcacttttcaccatttttcaatgcaatgtttctatttttatcatcttaac 51018388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 26040434 - 26040351
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||| | |||||||||||| |||||||||| | ||||||||||| |||||| |||| | ||||| |||||| ||||    
T  26040434 taaaaagttaaacttatcacttttcaccattttccaatactatatttctatttttatccccttatccaatgccccaaggacaat 26040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 31487756 - 31487839
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||| ||||| ||||||||| |||||||| |||||| |||||| |||| |||||| ||||   |||||||||||||||||    
T  31487756 taaaaagtcaaatttatcacttttaactatttttcaatgctatatttttatttttatccccttattcaatgctccaagggcaat 31487839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 33951735 - 33951798
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||| |||||| ||||    
T  33951735 taaaaagttaaatttatcacttttcacaattttccaatactatatttctatttttatcccctta 33951798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 35511254 - 35511203
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  35511254 taaaaagtcaaattcatcacttttcaccattttccaatacaatatttctatt 35511203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 41956287 - 41956204
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||| ||||||  |||||||||||  ||||||||||| ||||||||||| |  |||| |||||||||||    
T  41956287 taaaaagttaaatttatcatttttcatcattttccaatgttatatttctatttttatcctcttatccgatgccccaagggcaat 41956204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 336 - 418
Target Start/End: Original strand, 31168170 - 31168252
Alignment:
Q  336 aaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    ||||| ||||||| |||||||||||| |||||||||||| | | ||||||| |||||| |||  | |||||||||||||||||    
T  31168170 aaaaaattaaatttatcacttttcaccattttccaatgctaaaattctatttttatccccttgtctaatgctccaagggcaat 31168252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 35927348 - 35927260
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatcttta 423  Q
    ||||||||||||||||||  ||||||| |||||| ||||||| ||| ||||| || || ||||||| |||| ||||||| || ||||||    
T  35927348 taaaaagttaaattcatcgtttttcaccattttctaatgcaaaattgctatttttttcttcttaaccaatggtccaaggacactcttta 35927260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 19329002 - 19328951
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||||||| ||||| |||||| |||||||||||| |||||||||||    
T  19329002 taaaaagttaaatttatcacatttcaccattttccaatgctatatttctatt 19328951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 20811298 - 20811361
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| | |||||||||  ||||||||||| |||||| ||||    
T  20811298 taaaaagttaaatttatcacttttcaccaatttccaatgttatatttctatttttatcccctta 20811361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 32131177 - 32131260
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| ||||||| |||| |||||||||| | ||||||||||| |||||   ||| | |||| ||||||||||||    
T  32131177 taaaaagttaaatttatcacttatcaccattttccaatactatatttctatttttatctctttatccaatgttccaagggcaat 32131260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 51266959 - 51267042
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| ||||| |||| | ||||||||||| |||||  |||| | |||| |||||| |||||    
T  51266959 taaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatctccttatccaatgttccaagagcaat 51267042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 418
Target Start/End: Original strand, 2362667 - 2362749
Alignment:
Q  336 aaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    ||||| ||||||| |||||||||||| |||||||||| | |||||| |||| |||||| |||| |  |||| |||||||||||    
T  2362667 aaaaaattaaatttatcacttttcaccattttccaatactatatttttatttttatccccttatccgatgccccaagggcaat 2362749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 23260739 - 23260829
Alignment:
Q  335 taaaaagttaaattcatca-cttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttag 424  Q
    ||||||||||||||||||| |||||||| ||||  ||||||||||||| |||| ||||| ||||||  |||| || ||| ||| |||||||    
T  23260739 taaaaagttaaattcatcagcttttcaccatttctcaatgcaatatttttatttttatcatcttaatcaatgttctaagagcattctttag 23260829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 384
Target Start/End: Original strand, 3769848 - 3769897
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttcta 384  Q
    |||||||| ||||| |||||||||||| ||||| ||||||||||||||||    
T  3769848 taaaaagtcaaatttatcacttttcaccatttttcaatgcaatatttcta 3769897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 20435864 - 20435807
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatc 392  Q
    ||||||||||||||| ||||||||||| |||||||||  |||| |||||||| |||||    
T  20435864 taaaaagttaaattcttcacttttcacaattttccaagacaatgtttctatttttatc 20435807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 30199860 - 30199796
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    |||||| |||| |||||||||||| |  ||||| ||||||||||||| |||| ||||||||||||    
T  30199860 taaaaaattaatttcatcactttttatcatttttcaatgcaatatttatatttttatcctcttaa 30199796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 34316797 - 34316713
Alignment:
Q  335 taaaaagttaaattc-atcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    ||||||||||||||  |||||||||||||||||| |||||  |||||| |||| |||||  |||| | ||||| |||||||||||    
T  34316797 taaaaagttaaattttatcacttttcactatttttcaatgttatatttatatttttatctccttatccaatgccccaagggcaat 34316713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 52021067 - 52021131
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    |||||||||||||| |||| |||| ||  |||| |||||||| ||||||||||||||| ||||||    
T  52021067 taaaaagttaaatttatcattttttacagtttttcaatgcaaaatttctattcttatcatcttaa 52021131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 27839380 - 27839297
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||| ||||||| |||| ||||||  ||||| |||||| ||||||||||| |||| | |||| | ||||| |||||||||||    
T  27839380 taaaaacttaaatttatcatttttcatcatttttcaatgctatatttctatttttattcccttatccaatgccccaagggcaat 27839297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 45688778 - 45688841
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||  ||||| |||||| || |||||||| |||||| ||||    
T  45688778 taaaaagttaaatttatcacttttcatcatttttcaatgctatgtttctatttttatcccctta 45688841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 50514687 - 50514625
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| ||||||||| || ||||| |||||  ||||||||||| |||||||||||    
T  50514687 taaaaagttaaatttatcactttttaccatttttcaatgttatatttctatt-ttatcctctta 50514625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 52895759 - 52895830
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    |||||||||||| |  ||||||||||| ||||  |||| |||| |||||||| ||||| |||||||||||||    
T  52895759 taaaaagttaaaattttcacttttcacaatttctcaatacaatgtttctatttttatcatcttaacaaatgc 52895830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 342 - 404
Target Start/End: Original strand, 9459935 - 9459997
Alignment:
Q  342 ttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaat 404  Q
    |||||||||||  ||||||| ||||| ||||||||||||| |||| | || ||||||||||||    
T  9459935 ttaaattcatcgtttttcaccatttttcaatgcaatatttatattttcattctcttaacaaat 9459997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 405
Target Start/End: Original strand, 3929817 - 3929850
Alignment:
Q  372 tgcaatatttctattcttatcctcttaacaaatg 405  Q
    ||||||||||||||| ||||||||||||||||||    
T  3929817 tgcaatatttctatttttatcctcttaacaaatg 3929850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 30475460 - 30475517
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatc 392  Q
    |||||||||||||| |||||||||||| ||||| |||| | |||||| |||| |||||    
T  30475460 taaaaagttaaatttatcacttttcaccatttttcaatactatatttttatttttatc 30475517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 372
Target Start/End: Original strand, 46823507 - 46823544
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaat 372  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  46823507 taaaaagttaaattcataacttttcaccattttccaat 46823544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 396
Target Start/End: Original strand, 52341636 - 52341697
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctct 396  Q
    ||||||||||||||||||| ||||||  |||||||||   ||||||||||||  ||||||||    
T  52341636 taaaaagttaaattcatcatttttcatcattttccaacataatatttctatttgtatcctct 52341697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 400
Target Start/End: Original strand, 55120126 - 55120191
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaac 400  Q
    |||||||| |||||| ||| ||||||||||||| |||| ||||||||  ||| ||||| |||||||    
T  55120126 taaaaagtcaaattcttcatttttcactatttttcaatacaatattttaatttttatcatcttaac 55120191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 426
Target Start/End: Complemental strand, 11996174 - 11996087
Alignment:
Q  338 aaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||  |||||||||||| |||||||||| ||| |||||||   || ||||||||||  |||| | ||||||| |||||||||    
T  11996174 aaagttaaatctatcacttttcaccattttccaatacaacatttctaagtttgtcctcttaac-catgccctaagggcactctttagca 11996087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 523 - 603
Target Start/End: Original strand, 30546734 - 30546814
Alignment:
Q  523 ataaaattcaggaactctgttacgatgagacaatagagaattcataggagtgcacaaatccgactcaaaaaagacattgtg 603  Q
    ||||||||||| |||||  ||| | |||||||| |||||||||| | || ||||| ||| ||||| ||||| |||||||||    
T  30546734 ataaaattcagaaactccattatgttgagacaacagagaattcacaagactgcacgaattcgactaaaaaatgacattgtg 30546814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 42627173 - 42627109
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    ||||||||||||||||||| | ||||| |||| | ||  ||||||||||||| ||||| ||||||    
T  42627173 taaaaagttaaattcatcattcttcaccatttcctaaaacaatatttctatttttatcatcttaa 42627109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 7e-26; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 11659297 - 11659385
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatcttta 423  Q
    ||||||||||||||| ||||||||||||||||| |||| |||||||| |||| ||||||||||||| ||||||||||||||| ||||||    
T  11659297 taaaaagttaaattcttcacttttcactatttttcaatacaatatttttatttttatcctcttaacgaatgctccaagggcactcttta 11659385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 765224 - 765141
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| |||||||||||  ||||||||||| |||||| |||| | ||||| |||||||||||    
T  765224 taaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttatccccttatccaatgccccaagggcaat 765141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 335 - 405
Target Start/End: Complemental strand, 34220720 - 34220650
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    |||||| |||||||||||||||||||| | || ||||||||| ||||||||| ||||||||||||| ||||    
T  34220720 taaaaacttaaattcatcacttttcaccacttcccaatgcaagatttctatttttatcctcttaaccaatg 34220650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 2239617 - 2239708
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||||||| |||| || ||||| || ||||||||||||||  ||||||||||||| ||||  | ||| ||| |||||||||    
T  2239617 taaaaagttaaattcatcattttttaccatttttcattgcaatatttctatctttatcctcttaaccaatgtcctaagagcattctttagca 2239708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 37230255 - 37230326
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    ||||||||||| || |||||||||||| ||||| |||| |||||||||||||||||| || ||||| |||||    
T  37230255 taaaaagttaagtttatcacttttcaccatttttcaatacaatatttctattcttatgctattaaccaatgc 37230326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 39401608 - 39401526
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| ||||| |||||  ||||||||||| |||||| |||| | ||||| |||||||||||    
T  39401608 taaaaagttaaatt-atcacttttcaccatttttcaatgttatatttctatttttatccccttatccaatgccccaagggcaat 39401526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 862624 - 862682
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcc 393  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||| ||||||    
T  862624 taaaaagttaaatttatcacttttcaccattttccaatactatatttctatttttatcc 862682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 335 - 414
Target Start/End: Complemental strand, 12695312 - 12695231
Alignment:
Q  335 taaaaagttaaattcatcacttttcact--attttccaatgcaatatttctattcttatcctcttaacaaatgctccaaggg 414  Q
    ||||||||||||||| | |||||||||   |||||||||| |||| |||||||| ||||| ||||||| |||||||||||||    
T  12695312 taaaaagttaaattctttacttttcacaccattttccaatacaatgtttctatttttatcatcttaaccaatgctccaaggg 12695231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 336 - 405
Target Start/End: Original strand, 2805419 - 2805488
Alignment:
Q  336 aaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    ||||||||||||||||||||||| | |||||| |||| ||||| || |||| ||||||||||||| ||||    
T  2805419 aaaaagttaaattcatcacttttaattatttttcaatacaatacttatatttttatcctcttaaccaatg 2805488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 397
Target Start/End: Original strand, 2136473 - 2136533
Alignment:
Q  337 aaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctt 397  Q
    |||||| ||||||  |||||||||  |||||||||||||||||||||||| ||||||||||    
T  2136473 aaaagtcaaattctccacttttcatcattttccaatgcaatatttctatttttatcctctt 2136533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 16361604 - 16361684
Alignment:
Q  338 aaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    ||||||||||| |||| |||| || |||||||||||  ||||||||||| |||| | |||| | |||||||||||||||||    
T  16361604 aaagttaaatttatcaatttttaccattttccaatgttatatttctatttttattcccttatccaatgctccaagggcaat 16361684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 1321203 - 1321286
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||| ||||||||| || | |||| || |||||||||||  ||||||||||| ||||||||||| | |||||||||||| ||||    
T  1321203 taaagagttaaatttattattttttaccattttccaatgttatatttctatttttatcctcttatccaatgctccaaggacaat 1321286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 2966575 - 2966638
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||| ||||||| |||||||||||| |||||||||||  ||||||||||| |||||| ||||    
T  2966575 taaaaaattaaatttatcacttttcaccattttccaatgttatatttctatttttatcccctta 2966638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 33864390 - 33864453
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    ||||| |||||||| || ||||||||| |||||||||||| |||||| |||| |||||||||||    
T  33864390 taaaatgttaaatttattacttttcaccattttccaatgcgatatttttatttttatcctctta 33864453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 8327015 - 8327085
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    ||||||||||||||  |||||||||| |||||  ||| ||||||||| |||| ||||||||||||| ||||    
T  8327015 taaaaagttaaatttttcacttttcattatttctcaaagcaatatttttatttttatcctcttaaccaatg 8327085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 384
Target Start/End: Complemental strand, 747565 - 747516
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttcta 384  Q
    |||||||||||||  ||||||||||||||||||||||| ||| |||||||    
T  747565 taaaaagttaaatctatcacttttcactattttccaatacaacatttcta 747516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 6999237 - 6999294
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatc 392  Q
    |||||||||||||| |||| ||||||| |||||||||| | ||||||||||| |||||    
T  6999237 taaaaagttaaatttatcatttttcaccattttccaatactatatttctatttttatc 6999294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 13997978 - 13997922
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    |||||||||||||| |||| ||||||| ||||| |||||| ||||||||||| ||||    
T  13997978 taaaaagttaaatttatcatttttcacaatttttcaatgctatatttctatttttat 13997922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 487
Target Start/End: Original strand, 29994517 - 29994569
Alignment:
Q  435 acaaaagcaaaattaactcatatcattaattagaaaaagtttaatacaaaaag 487  Q
    |||||||||||||||||||||||||||||| || ||| ||| |||||| ||||    
T  29994517 acaaaagcaaaattaactcatatcattaataaggaaaggttcaatacataaag 29994569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 342 - 386
Target Start/End: Complemental strand, 41890186 - 41890142
Alignment:
Q  342 ttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||||||||||||  |||||||||| |||||||||||||    
T  41890186 ttaaattcatcacttttcatcattttccaatacaatatttctatt 41890142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 44299755 - 44299679
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaa 411  Q
    ||||| |||||||| |||||||||||| ||||| | | || ||||||||||| ||||||||||| | ||||| ||||    
T  44299755 taaaatgttaaatttatcacttttcaccatttttcgaggctatatttctatttttatcctcttacccaatgccccaa 44299679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 35445363 - 35445301
Alignment:
Q  336 aaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    ||||||||||||| |||||||||||| ||||| |||||  |||||| |||| |||||| ||||    
T  35445363 aaaaagttaaatttatcacttttcaccatttttcaatgttatatttatatttttatcccctta 35445301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 39085866 - 39085808
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcc 393  Q
    |||||||||||||| ||||||||| |  |||||||||||  ||||||||||| ||||||    
T  39085866 taaaaagttaaatttatcactttttatcattttccaatgttatatttctatttttatcc 39085808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 43972031 - 43972081
Alignment:
Q  336 aaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    ||||||| ||||||||| ||||||||  |||||||||||||||||| ||||    
T  43972031 aaaaagtcaaattcatctcttttcacctttttccaatgcaatatttttatt 43972081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 386
Target Start/End: Original strand, 10522828 - 10522877
Alignment:
Q  337 aaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    ||||||||||||||  ||||||||| |||||||||| |||| ||||||||    
T  10522828 aaaagttaaattcacaacttttcaccattttccaatacaatttttctatt 10522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 30831653 - 30831709
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    ||||||||||||||||||| |||| |  |||||  ||||||||||||||||| ||||    
T  30831653 taaaaagttaaattcatcattttttataattttttaatgcaatatttctatttttat 30831709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 33726418 - 33726498
Alignment:
Q  338 aaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    ||||||||||| || | ||||||| ||||| |||| | |||||| |||| |||||| |||| | ||||| |||||||||||    
T  33726418 aaagttaaatttattatttttcaccatttttcaatactatatttttatttttatccccttatccaatgccccaagggcaat 33726498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 4e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 334 - 418
Target Start/End: Complemental strand, 4422039 - 4421955
Alignment:
Q  334 gtaaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||||||||| ||||||||||| | ||||| | |||||||||    
T  4422039 gtaaaaagttaaatttatcacttttcaccattttccaatgctatatttctatttttatcctcttatccaatgccctaagggcaat 4421955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 336 - 418
Target Start/End: Complemental strand, 35653328 - 35653246
Alignment:
Q  336 aaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    ||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||| |||| | ||||| |||||||||||    
T  35653328 aaaaagttaaatttatcacttttcaccattttccaatgctatatttctatttttatccccttatccaatgcaccaagggcaat 35653246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 3015124 - 3015033
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    |||||||||||||| |||| ||| |||||||||| ||  ||||||||||||| ||||| |||||||| |||||  ||||||| |||||||||    
T  3015124 taaaaagttaaattaatcattttacactattttctaacacaatatttctatttttatcatcttaacagatgctttaagggcactctttagca 3015033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 25017365 - 25017283
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaa 417  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||| |||||| |||| | |||||  |||||||||    
T  25017365 taaaaagttaaatttatcacttttcacaattttccaatactatatttctatttttatccccttatccaatgcctcaagggcaa 25017283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 416
Target Start/End: Complemental strand, 38610366 - 38610285
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggca 416  Q
    ||||||||||||||| |||||||| |  ||||| ||||||||| |||||||| ||||| ||||||| | |||||||||||||    
T  38610366 taaaaagttaaattcttcactttttatcatttttcaatgcaatgtttctatttttatcatcttaaccattgctccaagggca 38610285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 35945281 - 35945337
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||| ||||    
T  35945281 taaaaagttaaatttatcacttttcactattttccaatgttatatttctatttttat 35945337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 678485 - 678576
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||| ||||||||||| ||||||||| |||||||||| ||| | ||||||| || |||||||||| ||||||  ||||||| |||| ||||    
T  678485 taaaaggttaaattcattacttttcaccattttccaatacaacaattctatttttgtcctcttaaccaatgctttaagggcactcttcagca 678576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 1479210 - 1479147
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| ||||||||||| |||||| |||||| ||||||||||| |||||| ||||    
T  1479210 taaaaagttaaatttatcacttttcattatttttcaatgctatatttctatttttatcccctta 1479147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 418
Target Start/End: Original strand, 15915871 - 15915950
Alignment:
Q  339 aagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||| |||||||||||| |||||||||||| ||||||||||| |||| | |||| | ||||| ||||| |||||    
T  15915871 aagttaaatttatcacttttcaccattttccaatgctatatttctatttttattcccttatccaatgccccaagtgcaat 15915950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 27823294 - 27823357
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||| |||||| ||||    
T  27823294 taaaaagttaaatttatcacttttcaccattttccaatactatatttctatttttatcccctta 27823357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 43414138 - 43414075
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||| ||||||| |||||||||||| ||||||||||| |||||| ||||    
T  43414138 taaaaagttaaattgatcatttttcaccattttccaatgctatatttctatttttatcccctta 43414075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 412
Target Start/End: Original strand, 1759852 - 1759929
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaag 412  Q
    |||||||||||||| |||||||||| | ||||| |||| | ||||||||||| ||||||||||| | ||||| |||||    
T  1759852 taaaaagttaaatttatcacttttctccatttttcaatactatatttctatttttatcctcttatccaatgccccaag 1759929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 3242027 - 3241963
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    ||||||||| ||||||||| ||||||||| || |||||||||||||| |||| ||||| ||||||    
T  3242027 taaaaagtttaattcatcaattttcactacttcccaatgcaatatttttatttttatcgtcttaa 3241963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 391
Target Start/End: Complemental strand, 12068248 - 12068192
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||| ||||    
T  12068248 taaaaagttaaatttatcacttttcaccattttccaatactatatttctatttttat 12068192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 5151524 - 5151595
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    |||||||||||||| |||| ||||||  |||||||||||  ||||||||||| |||||| |||| |||||||    
T  5151524 taaaaagttaaatttatcatttttcatcattttccaatgttatatttctatttttatccccttatcaaatgc 5151595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 17168711 - 17168782
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    |||||||| |||||||||| |||||||  |||| ||||||||||||||||||  |||| ||||||| |||||    
T  17168711 taaaaagtcaaattcatcatttttcaccgtttttcaatgcaatatttctatttgtatcttcttaaccaatgc 17168782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 34546813 - 34546896
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||| ||||||| |||||||||||| ||||| |||||  ||||||||||| |||||| |||| | ||| |||||||| ||||    
T  34546813 taaaaaattaaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatccaatactccaaggacaat 34546896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 38508040 - 38508103
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    ||||| ||||||||||| | ||| ||||||||||||||||||||||| |||| ||||| |||||    
T  38508040 taaaatgttaaattcattattttgcactattttccaatgcaatatttatatttttatcttctta 38508103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 39335508 - 39335599
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    |||||||||||||||||||||||| ||||||||  ||  ||| |||| ||||  |||||||||||  |||||  |||||||| |||||||||    
T  39335508 taaaaagttaaattcatcactttttactatttttgaacacaaaatttatatttgtatcctcttaatcaatgcatcaagggcattctttagca 39335599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 39567938 - 39568021
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||| ||||||  |||||||||||| |||||| |||| ||||||  ||| | ||||| |||||||||||    
T  39567938 taaaaagttaaatttatcatttttcatcattttccaatgctatatttatatttttatcccattatccaatgccccaagggcaat 39568021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 423
Target Start/End: Complemental strand, 39069350 - 39069264
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatcttta 423  Q
    ||||| ||||||||||||||||||||| |||||||||| |||| || ||||  ||||| ||||||| |||||  ||||| || ||||||    
T  39069350 taaaatgttaaattcatcacttttcacaattttccaatacaatgttcctat--ttatcatcttaaccaatgcctcaaggacactcttta 39069264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 387
Target Start/End: Original strand, 12914210 - 12914262
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattc 387  Q
    |||||| ||||||| |||||||||||| ||||| |||||| ||||||||||||    
T  12914210 taaaaaattaaatttatcacttttcaccatttttcaatgctatatttctattc 12914262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 350 - 398
Target Start/End: Complemental strand, 16315593 - 16315545
Alignment:
Q  350 atcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||| |||||||||||| ||||||||||| |||||| ||||    
T  16315593 atcacttttcaccattttccaatgctatatttctatttttatcccctta 16315545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 20184622 - 20184558
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    |||||||| ||||||||||||||||||  |||  ||||||||||||||||||  ||| |||||||    
T  20184622 taaaaagtgaaattcatcacttttcaccgtttctcaatgcaatatttctatttgtatactcttaa 20184558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 336 - 400
Target Start/End: Original strand, 24107539 - 24107602
Alignment:
Q  336 aaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaac 400  Q
    |||||||||| ||||||||||||||| | || ||||| |||||| |||||| |||||||||||||    
T  24107539 aaaaagttaa-ttcatcacttttcacaacttcccaatacaatatctctatttttatcctcttaac 24107602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 3639149 - 3639086
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||| ||||||| |||||| ||||| |||||||||||  ||||||||||| |||||| ||||    
T  3639149 taaaaaattaaatttatcactcttcaccattttccaatgttatatttctatttttatcccctta 3639086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 391
Target Start/End: Complemental strand, 4962589 - 4962534
Alignment:
Q  336 aaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    ||||||||||||| |||||||||||  |||||||||||  ||||||||||| ||||    
T  4962589 aaaaagttaaatttatcacttttcatcattttccaatgttatatttctatttttat 4962534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 406
Target Start/End: Complemental strand, 28599728 - 28599657
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    |||||||| ||||| |||| ||||||||||||||||||  ||||||| ||||| | | |||||||| |||||    
T  28599728 taaaaagtcaaatttatcatttttcactattttccaatataatatttttattcatgtgctcttaaccaatgc 28599657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 37243882 - 37243941
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcct 394  Q
    |||||||||||||| |||||||||||| ||||||||||   |||||| |||| |||||||    
T  37243882 taaaaagttaaatttatcacttttcaccattttccaatattatatttttatttttatcct 37243941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 344 - 394
Target Start/End: Original strand, 27535139 - 27535189
Alignment:
Q  344 aaattcatcacttttcactattttccaatgcaatatttctattcttatcct 394  Q
    |||||||||||||||||| ||||| |||| |||||||| |||| |||||||    
T  27535139 aaattcatcacttttcaccatttttcaatacaatatttatatttttatcct 27535189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 387
Target Start/End: Original strand, 10406822 - 10406874
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattc 387  Q
    |||||| ||||||| |||||||||| | ||||| |||| ||||||||||||||    
T  10406822 taaaaaattaaatttatcacttttctccatttttcaatacaatatttctattc 10406874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 28782666 - 28782698
Alignment:
Q  278 taaggaaattaaaagtagtaggtttgtattgaa 310  Q
    ||||||||||||||||||||| |||||||||||    
T  28782666 taaggaaattaaaagtagtagttttgtattgaa 28782698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 6e-20; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 488 - 606
Target Start/End: Original strand, 25121825 - 25121942
Alignment:
Q  488 gagataattgattattaataaccaaaaagtagcatataaaattcaggaactctgttacgatgagacaatagagaattcataggagtgcacaaatccgact 587  Q
    |||||| ||||| |||||||||  ||| |||||||| ||||||||| ||||| | |||| | ||||| ||||||||||| | |||||||| |||||||||    
T  25121825 gagatagttgataattaataacggaaa-gtagcatacaaaattcagaaactccgctacgcttagacactagagaattcacaagagtgcacgaatccgact 25121923  T
Q  588 caaaaaagacattgtgcca 606  Q
    |||||| ||||||||||||    
T  25121924 caaaaatgacattgtgcca 25121942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 40763284 - 40763367
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| ||||| |||||  ||||||||||| |||||| |||| | ||||| |||||||||||    
T  40763284 taaaaagttaaatttatcacttttcaccatttttcaatgttatatttctatttttatccccttatccaatgccccaagggcaat 40763367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 406
Target Start/End: Complemental strand, 41188860 - 41188789
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    |||||||||||||| ||||| |||||| |||||||||||| |||||| |||| ||||||||||| |||||||    
T  41188860 taaaaagttaaatttatcacctttcaccattttccaatgctatatttatatttttatcctcttatcaaatgc 41188789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 516 - 606
Target Start/End: Complemental strand, 6216463 - 6216373
Alignment:
Q  516 gtagcatataaaattcaggaactctgttacgatgagacaatagagaattcataggagtgcacaaatccgactcaaaaaagacattgtgcca 606  Q
    |||||||||||||||||| ||||||| |||  || |||||||||||||||| | |||| ||  ||||||||| ||||| ||||||||||||    
T  6216463 gtagcatataaaattcagaaactctgctacactgtgacaatagagaattcacaagagtacatgaatccgactaaaaaatgacattgtgcca 6216373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 601
Target Start/End: Original strand, 43783034 - 43783135
Alignment:
Q  499 ttattaataaccaaaaagtagcatataaaattcaggaactctgttacgatgagacaatagagaattcataggagtgcacaaatccgactcaaaaaagaca 598  Q
    |||||||||||| ||| ||||||| |||||||||| ||||| | |||| ||||||||| ||||||||| | |  ||||| ||||||||||||||| ||||    
T  43783034 ttattaataaccgaaa-gtagcatgtaaaattcagaaactccgctacgctgagacaatggagaattcacaagcatgcacgaatccgactcaaaaacgaca 43783132  T
Q  599 ttg 601  Q
    |||    
T  43783133 ttg 43783135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 412
Target Start/End: Original strand, 36279154 - 36279231
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaag 412  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||| |||| ||||||| ||| | ||||| |||||    
T  36279154 taaaaagttaaatttatcacttttcaccattttccaatgctatatttatatttttatcctattatccaatgccccaag 36279231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 386
Target Start/End: Original strand, 32204217 - 32204268
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  32204217 taaaaagttaaattcatcacttttcatcatttttcaatgcaatatttctatt 32204268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 42222256 - 42222319
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||| |||||| ||||    
T  42222256 taaaaagttaaatttatcacttttcaccattttccaataccatatttctatttttatcccctta 42222319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 43567580 - 43567497
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| |||||||||| | ||| ||||||| |||||  |||| | ||||| |||||||||||    
T  43567580 taaaaagttaaatttatcacttttcaccattttccaatactataattctatttttatctccttatccaatgccccaagggcaat 43567497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 414
Target Start/End: Complemental strand, 48454896 - 48454817
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaaggg 414  Q
    |||||||||||||| |||||||||||| |||| ||||||  ||||||||||| |||||| |||| | ||||| |||||||    
T  48454896 taaaaagttaaatttatcacttttcaccatttcccaatgttatatttctatttttatccccttatccaatgccccaaggg 48454817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 405
Target Start/End: Original strand, 9887207 - 9887252
Alignment:
Q  360 actattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||    
T  9887207 actattttccaatgcaatatttctatttttatcctcttaaccaatg 9887252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 491
Target Start/End: Complemental strand, 6216658 - 6216602
Alignment:
Q  435 acaaaagcaaaattaactcatatcattaattagaaaaagtttaatacaaaaaggaga 491  Q
    ||||||||||||||||||||||| |||||| || ||| ||| |||||||||||||||    
T  6216658 acaaaagcaaaattaactcatattattaataaggaaatgttcaatacaaaaaggaga 6216602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 8292780 - 8292856
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaa 411  Q
    |||||||  ||||| || ||||||||| |||||||||||| ||||||||||| |||||| |||| | ||||||||||    
T  8292780 taaaaaggcaaatttataacttttcaccattttccaatgctatatttctatttttatccccttatccaatgctccaa 8292856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 415
Target Start/End: Original strand, 8380476 - 8380556
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggc 415  Q
    |||||||||||||| |||||||||||  |||||||||||| |||||| |||| |||||| |||| | ||| | ||||||||    
T  8380476 taaaaagttaaatttatcacttttcatcattttccaatgctatatttttatttttatccccttatccaataccccaagggc 8380556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 338 - 426
Target Start/End: Complemental strand, 31360363 - 31360275
Alignment:
Q  338 aaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||| ||||||||| || |||| ||||| ||||||||||||| ||||| ||| ||| ||| | | ||||||| |||||||||    
T  31360363 aaagttaaatttatcactttttaccatttcccaatacaatatttctatttttatcttctaaactaataccctaagggcactctttagca 31360275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 35003640 - 35003727
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatcttta 423  Q
    |||||||||||||| |||||||||||| ||||| ||||  |||||||||||| || |||||| ||| ||||| ||||| ||| ||||||    
T  35003640 taaaaagttaaattaatcacttttcaccatttt-caatataatatttctatttttgtcctctaaactaatgccccaagagcactcttta 35003727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 40774316 - 40774252
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    ||||||||||||||||||| ||||||  ||||| ||||||||||||||||||  |||| ||||||    
T  40774316 taaaaagttaaattcatcaattttcatcatttttcaatgcaatatttctatttgtatcttcttaa 40774252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 1910279 - 1910361
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||| ||||||| |||||| ||||  ||||||||||| |||||| |||| ||||||| | |||||||||    
T  1910279 taaaaagttaaatttatcatttttcaccattttctaatgttatatttctatttttatcc-cttatcaaatgccctaagggcaat 1910361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 394
Target Start/End: Original strand, 22707084 - 22707143
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcct 394  Q
    |||||||| ||||| |||| |||||| ||||||||||||| ||||||||||| |||||||    
T  22707084 taaaaagtaaaatttatcatttttcattattttccaatgctatatttctatttttatcct 22707143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 29034722 - 29034785
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| |||||||||| | |||||| |||| |||||| ||||    
T  29034722 taaaaagttaaatttatcacttttcaccattttccaatactatatttatatttttatcccctta 29034785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 30538554 - 30538491
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||| |||||||||||||| ||| | ||||||||||| |||||| ||||    
T  30538554 taaaaagttaaatttatcatttttcactattttctaatactatatttctatttttatcccctta 30538491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 5240406 - 5240348
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcc 393  Q
    |||||||||||||| |||||||||||| ||||| |||| | ||||||||||| ||||||    
T  5240406 taaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatcc 5240348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 27053567 - 27053509
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcc 393  Q
    |||||||||||||| |||||||||||| ||||||  |||| ||||||||||| ||||||    
T  27053567 taaaaagttaaatttatcacttttcaccattttctgatgctatatttctatttttatcc 27053509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 342 - 423
Target Start/End: Complemental strand, 41769715 - 41769634
Alignment:
Q  342 ttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatcttta 423  Q
    ||||||||  |||||||||| |||||  |||  ||| |||||||| ||||| ||||||| ||||||||||||||| ||||||    
T  41769715 ttaaattctccacttttcaccattttttaatataatgtttctatttttatcatcttaaccaatgctccaagggcactcttta 41769634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 371
Target Start/End: Original strand, 29687511 - 29687547
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaa 371  Q
    ||||||||||||||||||||||||||| |||||||||    
T  29687511 taaaaagttaaattcatcacttttcaccattttccaa 29687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 49069590 - 49069666
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaa 411  Q
    |||||||||| ||| |||||||||||| ||||| |||| | ||||||||||| ||||| ||||| | ||||| ||||    
T  49069590 taaaaagttagatttatcacttttcaccatttttcaatactatatttctatttttatcttcttatccaatgccccaa 49069666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 3681729 - 3681792
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| |||||||||||   ||||| |||| |||||| ||||    
T  3681729 taaaaagttaaatttatcacttttcaccattttccaatgttgtatttttatttttatcccctta 3681792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 5348046 - 5347995
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||||||| |||||||||||  |||||||||||  |||||||||||    
T  5348046 taaaaagttaaatttatcacttttcatcattttccaatgttatatttctatt 5347995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 7323027 - 7322964
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||| ||||||| |||||||||||| ||||| ||| |  ||||||||||| |||||||||||    
T  7323027 taaaaaattaaatttatcacttttcaccatttttcaaggttatatttctatttttatcctctta 7322964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 22521625 - 22521684
Alignment:
Q  339 aagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||| ||||||| |||  |||||||||||| ||||||||| | |||||||||||    
T  22521625 aagttaaatttatcacttctcatcattttccaatgctatatttctagttttatcctctta 22521684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 24359782 - 24359719
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| ||| ||||| || |||||||| ||| ||||||||||| |||||| ||||    
T  24359782 taaaaagttaaatttatccctttttaccattttccattgctatatttctatttttatcccctta 24359719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 405
Target Start/End: Original strand, 38977167 - 38977230
Alignment:
Q  342 ttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    ||||||||||| |||||| | ||||| ||||| |||||||||||| || | |||||||||||||    
T  38977167 ttaaattcatcgcttttctccatttttcaatgtaatatttctatttttgttctcttaacaaatg 38977230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 46478629 - 46478567
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||| ||||||||||||| |||||  ||||||||||| |||||| ||||    
T  46478629 taaaaagttaaatttatca-ttttcactatttttcaatgatatatttctatttttatcccctta 46478567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 435 - 464
Target Start/End: Original strand, 25121662 - 25121691
Alignment:
Q  435 acaaaagcaaaattaactcatatcattaat 464  Q
    ||||||||||||||||||||||||||||||    
T  25121662 acaaaagcaaaattaactcatatcattaat 25121691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 400
Target Start/End: Original strand, 44391030 - 44391095
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaac 400  Q
    |||||||| |||||||| | |||| || |||||| |||||||||||||||||  |||| |||||||    
T  44391030 taaaaagtcaaattcataattttttacaattttctaatgcaatatttctatttgtatcttcttaac 44391095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 5977789 - 5977757
Alignment:
Q  335 taaaaagttaaattcatcacttttcactatttt 367  Q
    ||||||||||||| |||||||||||||||||||    
T  5977789 taaaaagttaaatccatcacttttcactatttt 5977757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 40066991 - 40066915
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaa 411  Q
    |||||||||||||| |||| ||||||| ||||| ||||   ||||||||||| |||||| |||| | ||||| ||||    
T  40066991 taaaaagttaaatttatcatttttcaccatttttcaatattatatttctatttttatccccttatccaatgcaccaa 40066915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 4e-18; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 4989968 - 4990051
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||| |||||||||||||||||||| ||||||||||| |||||| |||| | |||||| ||||| ||||    
T  4989968 taaaaagttaaatttatcatttttcactattttccaatgctatatttctatttttatccccttatccaatgctacaaggacaat 4990051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 19389384 - 19389301
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||| |||||| |||| | ||||| |||||||||||    
T  19389384 taaaaagttaaatttatcacttttcacaattttccaatactatatttctatttttatccccttatccaatgccccaagggcaat 19389301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 7532828 - 7532891
Alignment:
Q  343 taaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||||| |||||| |||||    
T  7532828 taaattcatcacttttcaccattttccaatacaatatttctatttttatccccttaaccaatgc 7532891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 18068997 - 18069060
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||| ||||    
T  18068997 taaaaagttaaatttatcacttttcaccattttccaatgctatatttctatttttatcccctta 18069060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 5129530 - 5129447
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||| ||||||| |||||||||||  ||||| |||||| ||||||| ||| |||||| |||| ||||||||| |||||||||    
T  5129530 taaaaaattaaatttatcacttttcatcatttttcaatgctatatttcaatttttatccccttatcaaatgctctaagggcaat 5129447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 11332868 - 11332777
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||| ||||||| ||| ||||  |||| ||||||||||||| ||||| ||||||| |||||  ||| |||| |||||||||    
T  11332868 taaaaagttaaattcttcactttacaccatttctcaatacaatatttctatttttatcttcttaaccaatgccacaatggcactctttagca 11332777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 26195447 - 26195384
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| |||||||||||  ||||||||||| |||||| ||||    
T  26195447 taaaaagttaaatttatcacttttcacaattttccaatgttatatttctatttttatcccctta 26195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 6841770 - 6841706
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    |||||||||| || ||||||||||||  |||||| ||| ||||||||||||| ||||||||||||    
T  6841770 taaaaagttatatacatcacttttcatcattttctaatacaatatttctatttttatcctcttaa 6841706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 8018796 - 8018859
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| ||||||||||   ||||||||||| |||||| ||||    
T  8018796 taaaaagttaaatttatcacttttcaccattttccaatattatatttctatttttatcccctta 8018859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 25249415 - 25249364
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||| ||||    
T  25249415 taaaaagttaaatttatcacttttcaccattttccaatgctatatttttatt 25249364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 39972226 - 39972135
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    |||||||| |||||||||||||||||| |||| ||||| ||| |||||||   || || ||||||| ||||| | ||||||| |||||||||    
T  39972226 taaaaagtcaaattcatcacttttcaccatttcccaatacaacatttctaaatttgtcttcttaaccaatgccctaagggcactctttagca 39972135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 412
Target Start/End: Original strand, 38870039 - 38870116
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaag 412  Q
    ||||| ||| ||||| ||||||||||  ||||||||||||||| |||||||| ||||| ||||||  ||||| |||||    
T  38870039 taaaatgttgaattcttcacttttcatcattttccaatgcaatgtttctatttttatcatcttaatcaatgccccaag 38870116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 35930171 - 35930254
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| || | ||||||  ||||| |||| | |||||| |||| ||||| ||||| | |||||||||||||||||    
T  35930171 taaaaagttaaatttattatttttcatcatttttcaatactatatttttatttttatcttcttatccaatgctccaagggcaat 35930254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 45338039 - 45338102
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||| ||||||| ||||| |||||  ||||||||||| |||||| ||||    
T  45338039 taaaaagttaaatttatcatttttcaccatttttcaatgttatatttctatttttatcccctta 45338102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 24304978 - 24305040
Alignment:
Q  337 aaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    ||||||||||||| |||||||||||  |||| |||| ||||||||| ||| ||||| ||||||    
T  24304978 aaaagttaaattcttcacttttcaccgtttttcaatacaatatttccatttttatcatcttaa 24305040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 6939193 - 6939250
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatc 392  Q
    |||||||||||||| ||||||| |||| ||||| |||||  ||||||||||| |||||    
T  6939193 taaaaagttaaatttatcacttgtcaccatttttcaatgttatatttctatttttatc 6939250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 11264411 - 11264452
Alignment:
Q  278 taaggaaattaaaagtagtaggtttgtattgaattcaacaat 319  Q
    ||||||||||| || |||||||||||||||| ||||||||||    
T  11264411 taaggaaattataattagtaggtttgtattggattcaacaat 11264452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 400
Target Start/End: Original strand, 20169320 - 20169385
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaac 400  Q
    |||||||| |||||||| | |||| || |||||| |||||||||||||||||  |||| |||||||    
T  20169320 taaaaagtcaaattcataattttttacaattttctaatgcaatatttctatttgtatcttcttaac 20169385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 26892821 - 26892885
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    |||||||||||||| |||| |||| || ||||| ||||   ||||||||||| ||||||||||||    
T  26892821 taaaaagttaaatttatcattttttacaatttttcaatattatatttctatttttatcctcttaa 26892885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 31596495 - 31596431
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    |||||||| |||||||||| ||||||| |||||  ||  ||||||||||||| ||||| ||||||    
T  31596495 taaaaagtaaaattcatcatttttcaccattttttaacacaatatttctatttttatcatcttaa 31596431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 407
Target Start/End: Original strand, 44874360 - 44874432
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgct 407  Q
    |||||| ||||||| |||||||||||| ||||| |||||  |||||| |||| |||||| |||| | ||||||    
T  44874360 taaaaatttaaatttatcacttttcaccatttttcaatgttatatttatatttttatccccttatccaatgct 44874432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 28850981 - 28850898
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| |||||||||||  ||||||||||| |||| |||||| | ||||| |||||||||||    
T  28850981 taaaaagttaaatttatcacttttcaccattttccaatgttatatttctatttttattctcttatctaatgccccaagggcaat 28850898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 34874602 - 34874685
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||| ||||||| |||||||||||| |||||||||||| ||||||||||| |||||| |||| | ||||| |||||||||||    
T  34874602 taaaaaattaaatttatcacttttcaccattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaat 34874685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 335 - 417
Target Start/End: Complemental strand, 7190546 - 7190464
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaa 417  Q
    |||||||||||||| |||||||||||  |||||  ||||| ||||||||||| ||||||||||||| ||||| ||||||||||    
T  7190546 taaaaagttaaatttatcacttttcatcatttttgaatgctatatttctatttttatcctcttaaccaatgccccaagggcaa 7190464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 11385881 - 11385798
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| || ||||||||| |||||||||| | ||||||||||| |||||| |||| | |||||| ||||||||||    
T  11385881 taaaaagttaaatttataacttttcaccattttccaatactatatttctatttttatccccttatccaatgctgcaagggcaat 11385798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 14331872 - 14331963
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||| ||| ||||||| |||| ||||| |||| |||||||| ||||| | ||||| ||||| ||||||||| |||||||||    
T  14331872 taaaaagttaaattcttcatttttcaccatttcccaatacaatgtttctatttttatcattttaaccaatgccccaagggcactctttagca 14331963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 43168176 - 43168267
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    |||||||||||| || ||||||||||| |||| ||||| |||| |||||||| ||||| ||||||| ||||| | ||||||| |||||||||    
T  43168176 taaaaagttaaactcttcacttttcaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccctaagggcactctttagca 43168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 426
Target Start/End: Complemental strand, 44359743 - 44359652
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||| ||||||||||| |||| || || |||| |||||||| ||||| ||||||| ||||  ||||||||| |||||||||    
T  44359743 taaaaagttaaattcttcacttttcaccatttcccgatacaatgtttctatttttatcatcttaaccaatggcccaagggcactctttagca 44359652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 49508804 - 49508722
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||| ||| |||||||||||| ||||||||||| |||||| |||| | ||||| |||||||||||    
T  49508804 taaaaagttaaatttatcacttt-caccattttccaatgctatatttctatttttatccccttatccaatgccccaagggcaat 49508722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 49901961 - 49902024
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| |||||||||| | ||||||||||| |||||||||||    
T  49901961 taaaaagttaaatttatcacttttcaccattttccaatactatatttctatttttatcctctta 49902024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 2125778 - 2125701
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaag 412  Q
    |||||||||||||| |||||||||||| ||||| |||||| ||||||||||| |||||| |||| | ||||| |||||    
T  2125778 taaaaagttaaatttatcacttttcacaatttttcaatgctatatttctatttttatccccttatccaatgccccaag 2125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 41492944 - 41493032
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttag 424  Q
    ||||| || |||||||||||||||||| | || ||||||||||||||||||| ||||||||||||| |||||   ||||||| |||||||    
T  41492944 taaaatgtaaaattcatcacttttcaccacttcccaatgcaatatttctatt-ttatcctcttaaccaatgccttaagggcactctttag 41493032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 50295504 - 50295428
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaa 411  Q
    |||||||||||||| ||||||||||||||||||||||| | ||||||||||| ||| || |||| | ||||| ||||    
T  50295504 taaaaagttaaatttatcacttttcactattttccaatactatatttctatttttacccccttatccaatgccccaa 50295428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 4940811 - 4940748
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| ||||||||| || |||||||||||| ||||||||||| |||||| ||||    
T  4940811 taaaaagttaaatttatcacttttaaccattttccaatgctatatttctatttttatcccctta 4940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 426
Target Start/End: Original strand, 16691329 - 16691420
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttagca 426  Q
    ||||||||||||||| ||| |||| || |||| ||||| |||| |||||||| ||||| ||||||| ||||| ||||||||| || ||||||    
T  16691329 taaaaagttaaattcttcattttttaccatttcccaatacaatgtttctatttttatcatcttaaccaatgccccaagggcactcattagca 16691420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 405
Target Start/End: Original strand, 42064502 - 42064565
Alignment:
Q  342 ttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    |||||||||||| ||||||| |||||| |||| ||||||| |||||||||||||||||| ||||    
T  42064502 ttaaattcatcatttttcaccattttcaaatgtaatatttatattcttatcctcttaactaatg 42064565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 392
Target Start/End: Complemental strand, 6170622 - 6170565
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatc 392  Q
    |||||||||||||| |||| ||||| |||||||||||||| ||||||||||| |||||    
T  6170622 taaaaagttaaatttatcatttttctctattttccaatgctatatttctatttttatc 6170565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 27209792 - 27209709
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||| ||||||| |||||||||||  ||||||||||| ||||||  ||| | ||||| |||||| ||||    
T  27209792 taaaaagttaaatttatcaattttcaccattttccaatgttatatttctatttttatccctttatccaatgccccaaggacaat 27209709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 33930001 - 33930064
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||| ||||||||||||| |||||| |||||| |||| |||||| ||||    
T  33930001 taaaaagttaaatttatcagttttcactatttttcaatgctatatttatatttttatcccctta 33930064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 398
Target Start/End: Original strand, 40845286 - 40845349
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||||||||||| ||||| |||| | ||||||||||| |||||| ||||    
T  40845286 taaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatcccctta 40845349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 41147549 - 41147466
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||| |||| || ||||| |||||| ||||||||||| |||||| |||| | ||||| |||||| ||||    
T  41147549 taaaaagttaaattaatcattttttaccatttttcaatgctatatttctatttttatccccttatccaatgccccaaggacaat 41147466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 41898930 - 41898879
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||||||||||||||||| || ||||| |||| |||||||||||||    
T  41898930 taaaaagttaaattcatcactttttaccatttttcaatacaatatttctatt 41898879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 43433810 - 43433893
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| |||||  ||| | ||||||||||| |||||| |||| | ||||| ||||| |||||    
T  43433810 taaaaagttaaatttatcacttttcaccattttttaatactatatttctatttttatccccttatccaatgccccaagagcaat 43433893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 393
Target Start/End: Original strand, 11386016 - 11386074
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcc 393  Q
    |||||||||||||| |||| |||| || |||||||||||| ||||||||||| ||||||    
T  11386016 taaaaagttaaatttatcaatttttaccattttccaatgctatatttctatttttatcc 11386074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 343 - 392
Target Start/End: Complemental strand, 40742685 - 40742636
Alignment:
Q  343 taaattcatcacttttcactattttccaatgcaatatttctattcttatc 392  Q
    |||||||||| |||||||||||||||||| |||| ||||||||| |||||    
T  40742685 taaattcatcccttttcactattttccaaagcaaaatttctatttttatc 40742636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 40920220 - 40920292
Alignment:
Q  335 taaaaagttaaattcatcac--ttttcactattttccaatgcaatatttctattcttatcctcttaacaaatg 405  Q
    |||||||||||||| |||||  ||||||| | ||  |||||||||||||||||| ||||||||||||| ||||    
T  40920220 taaaaagttaaattaatcacacttttcaccacttctcaatgcaatatttctatttttatcctcttaaccaatg 40920292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 4656051 - 4656107
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    |||||||||||||| ||||||||| ||||||||||||||  |||||| |||| ||||    
T  4656051 taaaaagttaaatttatcactttttactattttccaatgttatatttttatttttat 4656107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 17402983 - 17403054
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    |||||||||||||||||||||||| || |||||  ||| ||||||||  ||| |||||| |||||| |||||    
T  17402983 taaaaagttaaattcatcactttttaccattttttaatacaatattttaatttttatccccttaaccaatgc 17403054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 22346308 - 22346225
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||| ||||||| |||||||||||| ||||| |||| | ||||||||||| |||| | |||| | || || |||||||||||    
T  22346308 taaaaaattaaatttatcacttttcaccatttttcaatactatatttctatttttattcccttatccaaagccccaagggcaat 22346225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 28277553 - 28277490
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| ||||||||| |  ||||| |||||  ||||||||||| |||||||||||    
T  28277553 taaaaagttaaatttatcactttttatcatttttcaatgttatatttctatttttatcctctta 28277490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 32213960 - 32213897
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||| ||||||| |||||||||||| |||||||||||   |||||||||| |||||| ||||    
T  32213960 taaaaaattaaatttatcacttttcaccattttccaatgttctatttctatttttatcccctta 32213897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 42607395 - 42607332
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||| ||||||| ||||| |||||| |||||| |||| |||||| ||||    
T  42607395 taaaaagttaaatttatcatttttcaccatttttcaatgctatatttttatttttatcccctta 42607332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 47655442 - 47655379
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||||||| |||| ||||||| ||||| |||||| ||| ||||||| |||||| ||||    
T  47655442 taaaaagttaaatttatcaattttcaccatttttcaatgctatacttctatttttatcccctta 47655379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 48938686 - 48938741
Alignment:
Q  351 tcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    ||||||||||| |||||| ||| ||||||||||||| ||||| ||||||| |||||    
T  48938686 tcacttttcaccattttctaatacaatatttctatttttatcatcttaactaatgc 48938741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 386
Target Start/End: Original strand, 51424192 - 51424243
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    ||||||||||||||||||||||||  | ||||| |||| |||||||||||||    
T  51424192 taaaaagttaaattcatcacttttagcaatttttcaatacaatatttctatt 51424243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 397
Target Start/End: Complemental strand, 8892842 - 8892780
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctt 397  Q
    ||||||||||||||| | ||||||||| |||||||||| | || |||||||| ||||| ||||    
T  8892842 taaaaagttaaattctttacttttcaccattttccaatacgatgtttctatttttatcatctt 8892780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 393
Target Start/End: Complemental strand, 26469653 - 26469595
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcc 393  Q
    |||||||||||||| |||| |||||| |||||| |||||| |||||| |||| ||||||    
T  26469653 taaaaagttaaatttatcatttttcattatttttcaatgctatatttttatttttatcc 26469595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 413
Target Start/End: Original strand, 45721787 - 45721865
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagg 413  Q
    |||||||||||||| |||| |||| || |||||||||||  |||||| |||| |||||  |||| | ||||||||||||    
T  45721787 taaaaagttaaatttatcagtttttaccattttccaatgttatatttttatttttatcaccttatccaatgctccaagg 45721865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 412
Target Start/End: Complemental strand, 932228 - 932151
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaag 412  Q
    |||||| ||||||| || | ||||||  |||||||||||| ||||||||||| |||||| |||| | ||||| |||||    
T  932228 taaaaaattaaatttataatttttcatcattttccaatgctatatttctatttttatccccttatccaatgccccaag 932151  T

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Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 391
Target Start/End: Original strand, 5945455 - 5945511
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    |||||||| ||||| |||||||||||| ||||| |||||  ||||||||||| ||||    
T  5945455 taaaaagtaaaatttatcacttttcaccatttttcaatgtcatatttctatttttat 5945511  T

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Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 399
Target Start/End: Original strand, 27210760 - 27210824
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    |||||||||||||| |||| ||||||| ||||| || | ||||| || |||| ||||||||||||    
T  27210760 taaaaagttaaattgatcatttttcaccatttttcattacaatagttttatttttatcctcttaa 27210824  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 418
Target Start/End: Complemental strand, 29692415 - 29692332
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||| ||||| |||| | ||||||||||| ||||||  ||| | ||||| |||||||||||    
T  29692415 taaaaagttaaatttatcacttttcaccatttttcaatactatatttctatttttatccatttatccaatgccccaagggcaat 29692332  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 12191528 - 12191604
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaa 411  Q
    |||||| ||||||| |||||||||||| |||| ||||||| ||||||||||| |||||| |||| | ||||| ||||    
T  12191528 taaaaaattaaatttatcacttttcaccatttaccaatgctatatttctatttttatccacttatccaatgcgccaa 12191604  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 335 - 399
Target Start/End: Complemental strand, 27127581 - 27127517
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    ||||||||||||||||||| ||||||| ||||  |||| ||||||||||||| ||||| ||||||    
T  27127581 taaaaagttaaattcatcatttttcaccatttctcaatacaatatttctatttttatcatcttaa 27127517  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 7875255 - 7875204
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||||||| |||||||||||  |||||||||||| |||||||||||    
T  7875255 taaaaagttaaatttatcacttttcatcattttccaatgctatatttctatt 7875204  T

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Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 10855467 - 10855550
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||||||||||  ||||| ||||   ||||||||||| |||||| |||| ||||||| |||||| ||||    
T  10855467 taaaaagttaaatttatcacttttcatcatttttcaatattatatttctatttttatccccttatcaaatgccccaaggacaat 10855550  T

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Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 400
Target Start/End: Complemental strand, 6507463 - 6507398
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaac 400  Q
    ||||||||||||||  |||||||||| ||||| |||||||||  |||||||| ||||| |||||||    
T  6507463 taaaaagttaaatttttcacttttcaatatttcccaatgcaaagtttctatttttatcatcttaac 6507398  T

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Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 335 - 424
Target Start/End: Original strand, 28014670 - 28014759
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaatctttag 424  Q
    |||||||| ||| |||||| ||||||| |||| ||||| ||||||||||| | ||| ||||||||| ||||| | || |||| |||||||    
T  28014670 taaaaagtcaaactcatcatttttcaccatttcccaatacaatatttctaattttaccctcttaaccaatgccctaaaggcactctttag 28014759  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 6866950 - 6867026
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaa 411  Q
    ||||| |||||||| |||||||||||| |||||| ||||| |||||| |||| |||||| |||| | ||||| ||||    
T  6866950 taaaaggttaaatttatcacttttcaccattttcaaatgctatatttttatttttatccccttatccaatgccccaa 6867026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 418
Target Start/End: Original strand, 5578309 - 5578392
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgctccaagggcaat 418  Q
    |||||||||||||| |||| || ||| |||||| |||||| ||||||||||| |||||| || | | |||||  ||||||||||    
T  5578309 taaaaagttaaatttatcaattctcattatttttcaatgctatatttctatttttatcccctcatccaatgcctcaagggcaat 5578392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 386
Target Start/End: Complemental strand, 7880501 - 7880450
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctatt 386  Q
    |||||||||||||| |||||||||||  |||||| ||||| |||||||||||    
T  7880501 taaaaagttaaatttatcacttttcatcattttctaatgctatatttctatt 7880450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 28541991 - 28542062
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaacaaatgc 406  Q
    ||||||||| |||||||||||||| |||| |||||||  |||||||| |||| || | |||||||| |||||    
T  28541991 taaaaagttgaattcatcactttttactactttccaacacaatatttttattattgttctcttaaccaatgc 28542062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 337 - 391
Target Start/End: Complemental strand, 14232563 - 14232509
Alignment:
Q  337 aaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttat 391  Q
    ||||| ||||||||||||||||||| ||||| |||| |||||||| |||| ||||    
T  14232563 aaaagctaaattcatcacttttcaccatttttcaattcaatatttttatttttat 14232509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 31490817 - 31490776
Alignment:
Q  278 taaggaaattaaaagtagtaggtttgtattgaattcaacaat 319  Q
    |||||||| ||||| ||||| |||||||||||||||||||||    
T  31490817 taaggaaactaaaaatagtaagtttgtattgaattcaacaat 31490776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 32251335 - 32251376
Alignment:
Q  278 taaggaaattaaaagtagtaggtttgtattgaattcaacaat 319  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  32251335 taaggaaacaaaaaatagtaggtttgtattgaattcaacaat 32251376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 343 - 399
Target Start/End: Original strand, 13000173 - 13000229
Alignment:
Q  343 taaattcatcacttttcactattttccaatgcaatatttctattcttatcctcttaa 399  Q
    ||||| |||||||| ||  ||||||||||| |||||||| |||| ||||||||||||    
T  13000173 taaatgcatcacttatctttattttccaatacaatatttatatttttatcctcttaa 13000229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 335 - 392
Target Start/End: Original strand, 39622 - 39679
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatc 392  Q
    ||||||||||||||| ||| |||||||||||||||||| |||| |||||||| |||||    
T  39622 taaaaagttaaattcttcagttttcactattttccaatacaatgtttctatttttatc 39679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 606
Target Start/End: Complemental strand, 243788 - 243695
Alignment:
Q  513 aaagtagcatataaaattcaggaactctgttacgatgagacaatagagaattcataggagtgcacaaatccgactcaaaaaagacattgtgcca 606  Q
    ||||||||||||||||||||| |||||   |||  | |||| |||||||||||| | || ||||| ||||||||||||| | |||| |||||||    
T  243788 aaagtagcatataaaattcagaaactccactacactaagacgatagagaattcacaagattgcacgaatccgactcaaagatgacactgtgcca 243695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 491
Target Start/End: Complemental strand, 245281 - 245225
Alignment:
Q  435 acaaaagcaaaattaactcatatcattaattagaaaaagtttaatacaaaaaggaga 491  Q
    |||||||| ||||||||||||||||||||| |||||  |||  ||||||||||||||    
T  245281 acaaaagctaaattaactcatatcattaataagaaagggttcgatacaaaaaggaga 245225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 393
Target Start/End: Complemental strand, 4337 - 4286
Alignment:
Q  342 ttaaattcatcacttttcactattttccaatgcaatatttctattcttatcc 393  Q
    ||||||| |||||||||||| |||||||||||| |||||| |||| ||||||    
T  4337 ttaaatttatcacttttcacaattttccaatgctatatttttatttttatcc 4286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 16845 - 16783
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||| ||| |||| ||||||||||||| |||||| ||||||||||| |||||| ||||    
T  16845 taaaaagttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 16783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 27013 - 26951
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||| ||| |||| ||||||||||||| |||||| ||||||||||| |||||| ||||    
T  27013 taaaaagttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 26951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 37179 - 37117
Alignment:
Q  335 taaaaagttaaattcatcacttttcactattttccaatgcaatatttctattcttatcctctta 398  Q
    |||||||||| ||| |||| ||||||||||||| |||||| ||||||||||| |||||| ||||    
T  37179 taaaaagttacatttatcatttttcactatttt-caatgctatatttctatttttatcccctta 37117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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