View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5324-Insertion-5 (Length: 308)
Name: NF5324-Insertion-5
Description: NF5324
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5324-Insertion-5 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 7 - 308
Target Start/End: Complemental strand, 52544647 - 52544346
Alignment:
| Q |
7 |
aggataatcaagaataaaaacacacacacatacaattggttgataaaattaaaaaagagattatttgagttacccatttgtgcttgcttgtgagataacg |
106 |
Q |
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| T |
52544647 |
aggataatcaagaataaaaatacacacacatacaattggttgataaaattaaaaaagagattatttgagttacccatttgtgcttgcttgtgagataacg |
52544548 |
T |
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| Q |
107 |
acgattgaggagaaattggcaaggttccttcaaatcccaatagagcataactagtatgagagaacataattcttggacaaaattatttctttgaaaacaa |
206 |
Q |
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| T |
52544547 |
acgattgaggagaaattggcaaggttccttcaaatcccaatagagcataactagtatgagagaacataattcttggacaaaattatttctttgaaaacaa |
52544448 |
T |
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| Q |
207 |
aagaagcatgcacattgcacaaacacacaatttaaaagttttgcacaagcacacaattcaagaagaatcaatatttcaagccataacagaacatattcaa |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52544447 |
aagaagcatgcacattgcacaaacacacaatttaaaagttttgcacaagcacacaattcaagaagaatcaatatttcaagccataacagaacatattcaa |
52544348 |
T |
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| Q |
307 |
ag |
308 |
Q |
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|| |
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| T |
52544347 |
ag |
52544346 |
T |
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