View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5325_high_6 (Length: 345)

Name: NF5325_high_6
Description: NF5325
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5325_high_6
NF5325_high_6
[»] chr8 (27 HSPs)
chr8 (17-153)||(40484552-40484688)
chr8 (228-335)||(35260157-35260264)
chr8 (229-335)||(3100053-3100159)
chr8 (229-335)||(11044157-11044263)
chr8 (229-335)||(27752686-27752792)
chr8 (227-335)||(11992828-11992936)
chr8 (228-328)||(37598176-37598276)
chr8 (229-335)||(27621230-27621336)
chr8 (229-335)||(31132986-31133090)
chr8 (240-335)||(44052721-44052816)
chr8 (239-328)||(44411174-44411263)
chr8 (228-335)||(25321540-25321647)
chr8 (239-328)||(35344474-35344564)
chr8 (229-322)||(34713641-34713734)
chr8 (242-335)||(24612445-24612541)
chr8 (239-328)||(35346270-35346358)
chr8 (229-314)||(39187351-39187436)
chr8 (255-335)||(36538158-36538238)
chr8 (289-335)||(40486507-40486553)
chr8 (228-300)||(32678471-32678544)
chr8 (230-287)||(37566453-37566510)
chr8 (291-335)||(44358508-44358552)
chr8 (239-335)||(41426439-41426535)
chr8 (244-315)||(2238565-2238636)
chr8 (228-322)||(12108268-12108363)
chr8 (292-335)||(37567449-37567492)
chr8 (250-335)||(2052962-2053047)
[»] chr7 (33 HSPs)
chr7 (228-335)||(43107816-43107923)
chr7 (229-335)||(35181288-35181394)
chr7 (229-325)||(3157542-3157638)
chr7 (229-335)||(18206231-18206337)
chr7 (229-335)||(19932967-19933073)
chr7 (242-335)||(44600542-44600635)
chr7 (227-335)||(23106549-23106657)
chr7 (227-335)||(32491017-32491125)
chr7 (229-335)||(42617767-42617874)
chr7 (228-335)||(47383502-47383609)
chr7 (239-335)||(22111251-22111348)
chr7 (239-335)||(40583241-40583338)
chr7 (242-335)||(48879484-48879577)
chr7 (227-328)||(40560485-40560586)
chr7 (242-335)||(41815618-41815711)
chr7 (239-328)||(41890166-41890254)
chr7 (228-335)||(9818564-9818671)
chr7 (228-335)||(10720489-10720596)
chr7 (228-335)||(21654032-21654139)
chr7 (229-328)||(41889274-41889373)
chr7 (255-335)||(7989246-7989326)
chr7 (243-335)||(48937816-48937907)
chr7 (239-335)||(23731656-23731754)
chr7 (274-335)||(19964151-19964212)
chr7 (278-335)||(36576514-36576570)
chr7 (239-317)||(45599019-45599099)
chr7 (228-324)||(29235980-29236075)
chr7 (227-285)||(40593964-40594022)
chr7 (227-315)||(30082467-30082555)
chr7 (278-324)||(34808326-34808372)
chr7 (255-335)||(2633316-2633396)
chr7 (228-322)||(18102644-18102738)
chr7 (228-324)||(35084011-35084108)
[»] chr4 (24 HSPs)
chr4 (227-335)||(29180330-29180438)
chr4 (227-335)||(28681753-28681861)
chr4 (228-335)||(30776403-30776510)
chr4 (229-335)||(29899809-29899915)
chr4 (229-335)||(39969909-39970015)
chr4 (228-335)||(10591422-10591529)
chr4 (229-335)||(37788545-37788651)
chr4 (239-328)||(9798005-9798094)
chr4 (239-328)||(55937633-55937722)
chr4 (228-335)||(51495243-51495349)
chr4 (239-333)||(53677409-53677503)
chr4 (239-328)||(43980599-43980688)
chr4 (228-328)||(3043086-3043186)
chr4 (229-328)||(30777588-30777688)
chr4 (235-329)||(32012252-32012347)
chr4 (229-335)||(50768539-50768645)
chr4 (228-317)||(38187647-38187736)
chr4 (260-335)||(38940963-38941038)
chr4 (242-324)||(49902132-49902214)
chr4 (239-335)||(47807289-47807384)
chr4 (227-335)||(1620123-1620232)
chr4 (264-335)||(52713149-52713220)
chr4 (244-324)||(5222227-5222308)
chr4 (275-324)||(17236262-17236311)
[»] chr1 (32 HSPs)
chr1 (228-335)||(23873783-23873890)
chr1 (228-335)||(46949418-46949525)
chr1 (229-335)||(26907048-26907154)
chr1 (228-335)||(25990845-25990952)
chr1 (240-335)||(40935581-40935676)
chr1 (229-335)||(18036641-18036747)
chr1 (229-335)||(44875276-44875382)
chr1 (239-335)||(40960441-40960537)
chr1 (239-328)||(35941945-35942034)
chr1 (228-319)||(28017769-28017860)
chr1 (239-328)||(43656004-43656093)
chr1 (243-335)||(15311274-15311366)
chr1 (228-328)||(18852327-18852427)
chr1 (228-324)||(49924527-49924623)
chr1 (229-327)||(18913301-18913400)
chr1 (228-335)||(29488845-29488952)
chr1 (241-335)||(28916485-28916578)
chr1 (228-324)||(39026201-39026298)
chr1 (239-335)||(31970276-31970372)
chr1 (229-335)||(40220153-40220262)
chr1 (239-324)||(35189309-35189395)
chr1 (246-335)||(38942414-38942504)
chr1 (242-328)||(15285907-15285992)
chr1 (242-335)||(26479836-26479930)
chr1 (239-328)||(9128147-9128236)
chr1 (240-328)||(6848278-6848365)
chr1 (239-323)||(45357842-45357928)
chr1 (246-322)||(47997064-47997140)
chr1 (242-308)||(4529300-4529365)
chr1 (261-324)||(35884319-35884382)
chr1 (228-287)||(36037382-36037441)
chr1 (227-322)||(36384038-36384133)
[»] chr6 (11 HSPs)
chr6 (229-335)||(5121410-5121516)
chr6 (229-335)||(374196-374302)
chr6 (228-328)||(10228016-10228116)
chr6 (228-335)||(17721762-17721869)
chr6 (229-335)||(12278803-12278909)
chr6 (239-335)||(30766543-30766639)
chr6 (240-328)||(30949239-30949327)
chr6 (275-335)||(17598390-17598450)
chr6 (228-280)||(17599464-17599516)
chr6 (244-335)||(21964054-21964145)
chr6 (229-322)||(31887074-31887168)
[»] chr5 (16 HSPs)
chr5 (229-335)||(31316755-31316861)
chr5 (228-328)||(35462672-35462772)
chr5 (227-335)||(25962400-25962508)
chr5 (229-328)||(8145967-8146066)
chr5 (228-335)||(20914958-20915065)
chr5 (242-335)||(13146828-13146921)
chr5 (239-335)||(8541528-8541624)
chr5 (229-324)||(42365145-42365240)
chr5 (239-335)||(12638988-12639083)
chr5 (239-335)||(16286047-16286143)
chr5 (243-335)||(24432368-24432460)
chr5 (243-333)||(31690588-31690678)
chr5 (258-335)||(37066206-37066283)
chr5 (228-328)||(30086499-30086601)
chr5 (227-335)||(24439671-24439779)
chr5 (229-322)||(36413890-36413983)
[»] chr2 (23 HSPs)
chr2 (229-335)||(792309-792415)
chr2 (229-335)||(21539854-21539960)
chr2 (228-328)||(15858641-15858741)
chr2 (227-335)||(38549594-38549702)
chr2 (228-335)||(14565325-14565432)
chr2 (240-335)||(35832509-35832604)
chr2 (229-335)||(38071403-38071509)
chr2 (229-335)||(43451602-43451708)
chr2 (227-335)||(4092108-4092216)
chr2 (228-335)||(10979266-10979373)
chr2 (228-335)||(29514427-29514534)
chr2 (240-335)||(28492617-28492712)
chr2 (229-335)||(29513973-29514078)
chr2 (228-328)||(10478282-10478382)
chr2 (239-335)||(44803995-44804091)
chr2 (227-335)||(33635433-33635541)
chr2 (243-324)||(8784503-8784585)
chr2 (243-324)||(5091507-5091588)
chr2 (229-335)||(28424368-28424476)
chr2 (228-316)||(43075865-43075953)
chr2 (279-335)||(4033678-4033734)
chr2 (228-315)||(38564669-38564756)
chr2 (239-335)||(13822730-13822829)
[»] chr3 (28 HSPs)
chr3 (228-328)||(21654350-21654450)
chr3 (227-335)||(26641026-26641134)
chr3 (239-335)||(45347639-45347735)
chr3 (228-335)||(32322154-32322261)
chr3 (228-335)||(55400836-55400943)
chr3 (229-328)||(31126317-31126416)
chr3 (229-328)||(46580640-46580739)
chr3 (239-328)||(34022704-34022793)
chr3 (228-335)||(53020281-53020388)
chr3 (229-327)||(49068157-49068255)
chr3 (227-335)||(51426717-51426825)
chr3 (228-322)||(37323998-37324092)
chr3 (239-324)||(46820143-46820228)
chr3 (243-335)||(43576055-43576147)
chr3 (228-335)||(46295991-46296099)
chr3 (239-327)||(51255292-51255380)
chr3 (228-320)||(23514554-23514647)
chr3 (228-319)||(13541347-13541438)
chr3 (229-335)||(16739081-16739182)
chr3 (249-335)||(28793260-28793346)
chr3 (229-335)||(52252134-52252237)
chr3 (246-335)||(1335208-1335297)
chr3 (281-335)||(45781495-45781549)
chr3 (244-328)||(36188937-36189021)
chr3 (240-285)||(45782326-45782371)
chr3 (229-280)||(52171976-52172029)
chr3 (244-324)||(46303687-46303767)
chr3 (239-322)||(54464818-54464902)
[»] scaffold0495 (1 HSPs)
scaffold0495 (228-328)||(4734-4834)


Alignment Details
Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 153
Target Start/End: Original strand, 40484552 - 40484688
Alignment:
Q  17 ccaccactattaattaatgaaaaaatagaaagagtactaaatgaagaggatcataactctaaagaaacatcgttgagactttcaagagagtttaatcgtt 116  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  40484552 ccaccactattaattaatgaaaaaatagaaagagtgctaaatgaagaggatcctaattctaaagaaacatcgttgagactttcaagagagtttaatcgtt 40484651  T
Q  117 gaagtggatcatgggtaattaagagcaatcatttaag 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  40484652 gaagtggatcatgggtaattaagagcaatcatttaag 40484688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 35260264 - 35260157
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||    
T  35260264 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtatcattttttgtgttctcct 35260165  T
Q  328 tagaataa 335  Q
    | ||||||    
T  35260164 tggaataa 35260157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 3100159 - 3100053
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| ||| |||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  3100159 tactccctccgtcttaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcgtt 3100060  T
Q  329 agaataa 335  Q
     ||||||    
T  3100059 ggaataa 3100053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 11044263 - 11044157
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| || ||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  11044263 tactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 11044164  T
Q  329 agaataa 335  Q
     ||||||    
T  11044163 ggaataa 11044157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 27752792 - 27752686
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| ||||| |||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  27752792 tactccctccgtcctgatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 27752693  T
Q  329 agaataa 335  Q
     ||||||    
T  27752692 ggaataa 27752686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 11992936 - 11992828
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| ||||||||||||||| |||||||||||||||| | | |||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  11992936 aatactccctccgtcctaatttataagtaaaaaacactaattcacactaattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 11992837  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  11992836 ttggaataa 11992828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 37598276 - 37598176
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| ||||||||||||||||||||||||||||||||   |||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  37598276 atactccctccgtcctaatttataagcaaaaaacactaattcacggttattaagaaaactaacacttactgatttgaggtataattttttgtgttctcct 37598177  T
Q  328 t 328  Q
    |    
T  37598176 t 37598176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 27621336 - 27621230
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||| ||||||||||||||||||| |||    
T  27621336 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctactt 27621237  T
Q  329 agaataa 335  Q
     ||||||    
T  27621236 ggaataa 27621230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 31132986 - 31133090
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||  ||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  31132986 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 31133083  T
Q  329 agaataa 335  Q
     ||||||    
T  31133084 ggaataa 31133090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 240 - 335
Target Start/End: Complemental strand, 44052816 - 44052721
Alignment:
Q  240 tcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||||| ||||||||| | |||||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||||    
T  44052816 tcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctccttggaataa 44052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 44411174 - 44411263
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||    
T  44411174 gtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctcctt 44411263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 25321540 - 25321647
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | ||||| |||||||| ||| ||  ||||||||||||||||||| |||||||||||    
T  25321540 atactccctccgtcctaatttataagcaaaaaacactaattcacacttatttagaaaactaacatttggtgatttgaggtataattttctgtgttctcct 25321639  T
Q  328 tagaataa 335  Q
    | ||||||    
T  25321640 tggaataa 25321647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 35344564 - 35344474
Alignment:
Q  239 gtcctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||||||||||||||||||| | |||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  35344564 gtcctaatttataagcaaaaaaactctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 35344474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 229 - 322
Target Start/End: Complemental strand, 34713734 - 34713641
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgtt 322  Q
    ||||| ||| ||||||| ||||||| |||||| ||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  34713734 tactccctccgtcctaagttataagtaaaaaatactaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgtt 34713641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 335
Target Start/End: Original strand, 24612445 - 24612541
Alignment:
Q  242 ctaatttataagcaaaa---aacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||   |||||||||||| | |||||||||||| | ||||||| ||||||||||||||||||||| |||||||||| ||||||    
T  24612445 ctaatttataagcaaaaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttatgttctccttggaataa 24612541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 35346270 - 35346358
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||| | | | ||| ||||||||||||||||||||||||||||||||    
T  35346270 gtcctaatttataag-aaaaaactctaattcacatttattaagaaaattaatatttagtgatttgaggtataattttttgtgttctcctt 35346358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 229 - 314
Target Start/End: Complemental strand, 39187436 - 39187351
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattt 314  Q
    ||||| ||| ||| ||||||||||||||||||||||||||||   |||||||||||||| ||||||| ||||||||||||||||||    
T  39187436 tactccctccgtcataatttataagcaaaaaacactaattcacgcttattaagaaaactaacacttagtgatttgaggtataattt 39187351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 36538238 - 36538158
Alignment:
Q  255 aaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||| |||||||||||||||| ||| ||| |||||||||| |||||||||| ||||||| |||||||||    
T  36538238 aaaaaacactaattcacatttattaagaaaactaacatttagtgatttgaggaataattttttatgttctctttagaataa 36538158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 289 - 335
Target Start/End: Original strand, 40486507 - 40486553
Alignment:
Q  289 acacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  40486507 acacttaatgatttgaggtataattttttgtattctccttagaataa 40486553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 228 - 300
Target Start/End: Original strand, 32678471 - 32678544
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgat 300  Q
    |||||| ||| |||||||||||||||||||||| || ||||||| | |||||||||||||| ||||||| ||||    
T  32678471 atactccctccgtcctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgat 32678544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 287
Target Start/End: Original strand, 37566453 - 37566510
Alignment:
Q  230 actcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaact 287  Q
    |||| ||| |||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  37566453 actccctccgtcctaatttataagcaaaaaacactaattcacacttattaaaaaaact 37566510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 44358508 - 44358552
Alignment:
Q  291 acttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||    
T  44358508 acttagtgattttaggtataattttttgtgttctccttagaataa 44358552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 41426535 - 41426439
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||| |||||||||||||||||||  |||||| ||||||| | |||||  | || || |  ||| ||||||||||||||||||||| ||| ||||||    
T  41426535 gtcccaatttataagcaaaaaacaaaaattcacatttattgaaaaaacaaaaacatagtagtttaaggtataattttttgtgttcttcttggaataa 41426439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 315
Target Start/End: Original strand, 2238565 - 2238636
Alignment:
Q  244 aatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataatttt 315  Q
    |||||||||||||||||||| |||||| | |||||||||||||  | || || |  ||||||||||||||||    
T  2238565 aatttataagcaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgaggtataatttt 2238636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 12108363 - 12108268
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaac-actaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgtt 322  Q
    |||||| ||| || |||||||||||| ||||||  | ||||||  | |||||||||||||| ||| ||| | |||||| |||||||||||||||||    
T  12108363 atactccctccgttctaatttataagaaaaaaaatattaattctcacttattaagaaaactaacatttagtaatttgaagtataattttttgtgtt 12108268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 292 - 335
Target Start/End: Original strand, 37567449 - 37567492
Alignment:
Q  292 cttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||| ||||||||||||||||||||||||||||| || ||||||    
T  37567449 cttagtgatttgaggtataattttttgtgttctctttggaataa 37567492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 335
Target Start/End: Complemental strand, 2053047 - 2052962
Alignment:
Q  250 taagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||   ||| ||| | |||||||||||||| | || |||| ||| || ||||||||||||||||| || |||||||||    
T  2053047 taagcaaaaaaacttaaatcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttctttagaataa 2052962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 7e-40; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 43107816 - 43107923
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  43107816 atactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 43107915  T
Q  328 tagaataa 335  Q
    | ||||||    
T  43107916 tggaataa 43107923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 35181394 - 35181288
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  35181394 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttactgatttgaggtataattttttgtgttctcctt 35181295  T
Q  329 agaataa 335  Q
     ||||||    
T  35181294 ggaataa 35181288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 229 - 325
Target Start/End: Complemental strand, 3157638 - 3157542
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctc 325  Q
    ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  3157638 tactccctccgtcctaatttataagcaaaaaacactaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 3157542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 18206231 - 18206337
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  18206231 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcctt 18206330  T
Q  329 agaataa 335  Q
     ||||||    
T  18206331 ggaataa 18206337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 19932967 - 19933073
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  19932967 tactctctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcctt 19933066  T
Q  329 agaataa 335  Q
     ||||||    
T  19933067 ggaataa 19933073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 242 - 335
Target Start/End: Complemental strand, 44600635 - 44600542
Alignment:
Q  242 ctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||    
T  44600635 ctaatttataagcaaaaaatactaattcacatttattaagaaaactaacacttagcgatttgaggtataattttttgtgttctccttagaataa 44600542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 23106657 - 23106549
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| ||| |||||||||||||||||| ||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23106657 aatactccctccgtcttaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 23106558  T
Q  327 ttagaataa 335  Q
    ||| |||||    
T  23106557 ttaaaataa 23106549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 32491017 - 32491125
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| |||  ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||||| |||||||||||||||||||||    
T  32491017 aatactctctccatcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttctcc 32491116  T
Q  327 ttagaataa 335  Q
    ||| |||||    
T  32491117 ttataataa 32491125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 42617874 - 42617767
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    ||||| ||| |||||||||||||||||||||| |||||||||| | ||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  42617874 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaaaaaaactaacacttaatgatttgaggtataattttttgtgttctcct 42617775  T
Q  328 tagaataa 335  Q
    | ||||||    
T  42617774 tggaataa 42617767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 47383609 - 47383502
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| ||||||||||||||||||||||||| |||||| |  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  47383609 atactccctccgtcctaatttataagcaaaaaacacaaattcacacatattaagaaaactaacacttaatgatttgagatataattttttgtgttctcct 47383510  T
Q  328 tagaataa 335  Q
    || |||||    
T  47383509 taaaataa 47383502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 22111251 - 22111348
Alignment:
Q  239 gtcctaatttataagcaaaa-aacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  22111251 gtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 22111348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 40583338 - 40583241
Alignment:
Q  239 gtcctaatttataagcaaaa-aacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  40583338 gtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 40583241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 242 - 335
Target Start/End: Complemental strand, 48879577 - 48879484
Alignment:
Q  242 ctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||||||||||| | | |||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  48879577 ctaatttataagcaaaaaacactaatttacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattctccttggaataa 48879484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 227 - 328
Target Start/End: Complemental strand, 40560586 - 40560485
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| |||||||||||||||||||||||| ||||| | | ||||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  40560586 aatactccctccgtcctaatttataagcaaaaaacattaatttacacttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctcc 40560487  T
Q  327 tt 328  Q
    ||    
T  40560486 tt 40560485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 242 - 335
Target Start/End: Original strand, 41815618 - 41815711
Alignment:
Q  242 ctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||| | ||||| | | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  41815618 ctaatttataagcaaaaaataataattgacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 41815711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 41890166 - 41890254
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  41890166 gtcctaatttataag-aaaaaacactaattcaaacttattaagaaaactaacatttaatgatttggggtataattttttgtgttctcctt 41890254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 9818671 - 9818564
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| ||| |||||||||||  ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  9818671 atactccctccgtcgtaatttataagtcaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctcct 9818572  T
Q  328 tagaataa 335  Q
    | ||||||    
T  9818571 tggaataa 9818564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 10720596 - 10720489
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| ||| |||||||||||  ||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  10720596 atactccctccgtcgtaatttataagtcaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctcct 10720497  T
Q  328 tagaataa 335  Q
    | ||||||    
T  10720496 tggaataa 10720489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 21654032 - 21654139
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| || ||||||||||||||||||||||||||||| | |||||||||||||| | ||||| ||| ||||| ||| |||||||||||||||||    
T  21654032 atactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgacttgagatatcattttttgtgttctcct 21654131  T
Q  328 tagaataa 335  Q
    | ||||||    
T  21654132 tggaataa 21654139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 328
Target Start/End: Complemental strand, 41889373 - 41889274
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| || ||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||    
T  41889373 tactccctccgttctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgatgtataattttttgtattctcctt 41889274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 7989246 - 7989326
Alignment:
Q  255 aaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||| ||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  7989246 aaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 7989326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 48937816 - 48937907
Alignment:
Q  243 taatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||| |||||||||| |||||||| |||||||||||||  ||||||| ||  |||||||||||||||||||||||||||| ||||||    
T  48937816 taatttataaacaaaaaacacaaattcatacttattaagaaaacatacacttagtg-gttgaggtataattttttgtgttctccttggaataa 48937907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 23731754 - 23731656
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaac--tgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||  ||||||| |||||||| |||||||||||||||  | ||||||| |||||||| |||| |||||||||||||||||| ||||||    
T  23731754 gtcctaatttataaaaaaaaaacgctaattcacatttattaagaaaactataacacttagtgatttgatgtatgattttttgtgttctccttggaataa 23731656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 19964151 - 19964212
Alignment:
Q  274 ttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  19964151 ttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataa 19964212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 36576570 - 36576514
Alignment:
Q  278 taagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||    
T  36576570 taagaaaactaacacttagtgatttgaggtataattttttgt-ttctccttagaataa 36576514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 239 - 317
Target Start/End: Complemental strand, 45599099 - 45599019
Alignment:
Q  239 gtcctaatttataagcaaaaaacac--taattcatatttattaagaaaactgacacttaatgatttgaggtataatttttt 317  Q
    |||||||||||||| ||||||| ||  ||||||  | |||||||||||||| ||||||| |||||||||||||||||||||    
T  45599099 gtcctaatttataaacaaaaaaaacagtaattcgcacttattaagaaaactaacacttagtgatttgaggtataatttttt 45599019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 324
Target Start/End: Original strand, 29235980 - 29236075
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||| ||| ||||||||||||||||||||||||| |||||| | | |||||||||| ||| || || |  |||||||||||||||||||| ||||    
T  29235980 atactccctccgtcctaatttataagcaaaaaacacaaattcacactcattaagaaaa-tgaaacatagtagtttgaggtataattttttgtattct 29236075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 40594022 - 40593964
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaa 285  Q
    ||||||| ||| |||||||||||||||||||||| || |||||| ||||||||||||||    
T  40594022 aatactccctccgtcctaatttataagcaaaaaatacaaattcacatttattaagaaaa 40593964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 30082555 - 30082467
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataatttt 315  Q
    ||||||| |||||||| |||||||| ||||||||||| |||||| | |||||||||||||  | || || |  ||||||||||||||||    
T  30082555 aatactctctctgtcccaatttataggcaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgaggtataatttt 30082467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 34808372 - 34808326
Alignment:
Q  278 taagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||||||| | ||||| ||||||||||||||||||||||||||||    
T  34808372 taagaaaactaatacttagtgatttgaggtataattttttgtgttct 34808326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 2633316 - 2633396
Alignment:
Q  255 aaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||| || |||||| |||||||||||||||| | || |||| |||| ||||| || |||| |||||||||||| |||||    
T  2633316 aaaaaaaaccaattcacatttattaagaaaactaaaacataataattttaggtaaaacttttggtgttctccttaaaataa 2633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 18102738 - 18102644
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgtt 322  Q
    |||||| |||||||| || |||||||||||||| |  || ||| | |||||||||||||| | || |||  |||||  |||||||||||||||||    
T  18102738 atactccctctgtcccaaattataagcaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtt 18102644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 324
Target Start/End: Original strand, 35084011 - 35084108
Alignment:
Q  228 atactcactctgtcctaatttataagc-aaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||| ||| |||| ||||||||||| ||||||||| |||||| | ||| |||||||||| | ||  | | ||||||| |||| |||||||||||||    
T  35084011 atactccctccgtcccaatttataagcaaaaaaacacaaattcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttct 35084108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 29180330 - 29180438
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  29180330 aatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 29180429  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  29180430 ttggaataa 29180438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 28681861 - 28681753
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  28681861 aatactctctccgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcc 28681762  T
Q  327 ttagaataa 335  Q
    |||||||||    
T  28681761 ttagaataa 28681753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 30776403 - 30776510
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  30776403 atactccctccgtcctaatttataagcaaaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 30776502  T
Q  328 tagaataa 335  Q
    | ||||||    
T  30776503 tggaataa 30776510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 29899915 - 29899809
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||||||||||||||    
T  29899915 tactccctccgtcctaatttataagtaaaaaacactaattcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctcctt 29899816  T
Q  329 agaataa 335  Q
     ||||||    
T  29899815 ggaataa 29899809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 39969909 - 39970015
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  39969909 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 39970008  T
Q  329 agaataa 335  Q
     ||||||    
T  39970009 ggaataa 39970015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 10591422 - 10591529
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||| ||||||| | |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  10591422 atactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 10591521  T
Q  328 tagaataa 335  Q
    | ||||||    
T  10591522 tggaataa 10591529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 37788651 - 37788545
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| |||| ||||||||||||||||||||| | ||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  37788651 tactccctctctcctaatttataagcaaaaaatattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 37788552  T
Q  329 agaataa 335  Q
     ||||||    
T  37788551 ggaataa 37788545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 9798005 - 9798094
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||||||||| |||||||||    
T  9798005 gtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacatttagtgatttgaggtataattttttgcgttctcctt 9798094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 55937633 - 55937722
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  55937633 gtcctaatttataagtaaaaaacactaattcatacttattaagaaaactaacacttagtgatttgaggtataagtttttgtgttctcctt 55937722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 51495349 - 51495243
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| ||||||||||||||| |||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||||| |    
T  51495349 atactccctccgtcctaatttataag-aaaaaacactaattcacagttattaagaaaattaacacttaatgatttgaggtataattttttgtgttctctt 51495251  T
Q  328 tagaataa 335  Q
    || |||||    
T  51495250 tataataa 51495243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 333
Target Start/End: Original strand, 53677409 - 53677503
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaat 333  Q
    ||||||||||||||| |||||||| ||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||    
T  53677409 gtcctaatttataagtaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaat 53677503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 43980688 - 43980599
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||    
T  43980688 gtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataaatttttgtgttctcctt 43980599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 3043086 - 3043186
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| ||||||||||||||| |||||||||||||||| | |||||||||||||| ||||||| ||| ||||||||||||||||||||| |||||    
T  3043086 atactctctccgtcctaatttataagtaaaaaacactaattcacacttattaagaaaactaacacttagtgagttgaggtataattttttgtgtactcct 3043185  T
Q  328 t 328  Q
    |    
T  3043186 t 3043186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 229 - 328
Target Start/End: Complemental strand, 30777688 - 30777588
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    ||||| ||| |||||||||||||||||||||| |||||||||| | |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  30777688 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacaattagtgatttgaggtataattttttgtgttctcct 30777589  T
Q  328 t 328  Q
    |    
T  30777588 t 30777588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 235 - 329
Target Start/End: Original strand, 32012252 - 32012347
Alignment:
Q  235 ctctgtcctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctta 329  Q
    |||||| | ||||||||||||||||| || ||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32012252 ctctgttcaaatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcctta 32012347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 50768645 - 50768539
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| | ||||| ||||| ||| |||||||||||||||| |||||    
T  50768645 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgattcgagatataattttttgtgttttcctt 50768546  T
Q  329 agaataa 335  Q
     ||||||    
T  50768545 ggaataa 50768539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 38187647 - 38187736
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataatttttt 317  Q
    |||||| ||| |||||||||||||||| ||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||    
T  38187647 atactccctccgtcctaatttataagctaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt 38187736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 260 - 335
Target Start/End: Complemental strand, 38941038 - 38940963
Alignment:
Q  260 acactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  38941038 acactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataa 38940963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 49902214 - 49902132
Alignment:
Q  242 ctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    ||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||| |||||||||||| ||||||    
T  49902214 ctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttatgttct 49902132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 47807384 - 47807289
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||| | |  |||| ||||||||||||||||||||||||||||| || ||||||    
T  47807384 gtcctaatttataagcaaaaa-cactaattcacacttattaagaaaattaatccttagtgatttgaggtataattttttgtgttctctttggaataa 47807289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 1620232 - 1620123
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctc 325  Q
    ||||||| ||| || ||||||||||| ||||||| |||||||||| | |||||||| ||  | | ||||| ||||||||| ||| |||||||||||||||    
T  1620232 aatactccctcggttctaatttataaacaaaaaaacactaattcacacttattaaggaagttaatacttagtgatttgagatatcattttttgtgttctc 1620133  T
Q  326 cttagaataa 335  Q
    ||||||||||    
T  1620132 cttagaataa 1620123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 52713220 - 52713149
Alignment:
Q  264 taattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||||||||| | ||||| |||||||| ||||||||||||||||| | ||| ||||||    
T  52713220 taattcatatttattaagaaaactaatacttagtgatttgaagtataattttttgtgtttttcttggaataa 52713149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 5222227 - 5222308
Alignment:
Q  244 aatttataagcaaaaaacactaa-ttcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||||||||||||||   ||| |||| | |||||||||||||| | || || | ||||||| ||||||||||||||||||    
T  5222227 aatttataagcaaaaaaatataaattcacacttattaagaaaactaatacatagtaatttgagttataattttttgtgttct 5222308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 17236262 - 17236311
Alignment:
Q  275 tattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    ||||||||||||| | || ||||  |||||||||||||||||||||||||    
T  17236262 tattaagaaaactaaaacataatagtttgaggtataattttttgtgttct 17236311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 23873783 - 23873890
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  23873783 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 23873882  T
Q  328 tagaataa 335  Q
    | ||||||    
T  23873883 tggaataa 23873890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 46949525 - 46949418
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  46949525 atactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 46949426  T
Q  328 tagaataa 335  Q
    | ||||||    
T  46949425 tggaataa 46949418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 26907048 - 26907154
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  26907048 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtgttctcctt 26907147  T
Q  329 agaataa 335  Q
     ||||||    
T  26907148 ggaataa 26907154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 25990952 - 25990845
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||| ||| ||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  25990952 atactccctccgtcctaatttataagcaaaaaacattaaatcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 25990853  T
Q  328 tagaataa 335  Q
    | ||||||    
T  25990852 tggaataa 25990845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 335
Target Start/End: Original strand, 40935581 - 40935676
Alignment:
Q  240 tcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  40935581 tcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataa 40935676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 18036747 - 18036641
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| ||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||    
T  18036747 tactccctccgtcctaatttataagtaaaaaacattaattcatacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttcttctt 18036648  T
Q  329 agaataa 335  Q
     ||||||    
T  18036647 ggaataa 18036641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 44875382 - 44875276
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  44875382 tactctctccgtcctaatttataagcaaaaaacactaattcacacttactaagaaaactaacacttagtgatttgaggtataaatttttgtgttctcctt 44875283  T
Q  329 agaataa 335  Q
    |||||||    
T  44875282 agaataa 44875276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 40960441 - 40960537
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||| || |||||||||||||||||| ||||||    
T  40960441 gtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggcatgattttttgtgttctccttggaataa 40960537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 35942034 - 35941945
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||| |||||||    
T  35942034 gtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaattatttgaggtataattttttgtgctctcctt 35941945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 228 - 319
Target Start/End: Complemental strand, 28017860 - 28017769
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgt 319  Q
    |||||| |||||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||    
T  28017860 atactccctctgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgt 28017769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 239 - 328
Target Start/End: Original strand, 43656004 - 43656093
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||||||||| |||||||||||| ||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  43656004 gtcctaatttaaaagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 43656093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 15311366 - 15311274
Alignment:
Q  243 taatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||| |||||||||||||| | |||||||||||||| | ||||||||||||||||||||||||||||| |||||||| ||||||    
T  15311366 taatttataagcataaaacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtattctccttggaataa 15311274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 18852427 - 18852327
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| || ||||||||||||||||||||||||||||| | ||||||||||| || ||| ||| |||||||||||||||||||||||||||||||    
T  18852427 atactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaagctaacagttagtgatttgaggtataattttttgtgttctcct 18852328  T
Q  328 t 328  Q
    |    
T  18852327 t 18852327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 324
Target Start/End: Complemental strand, 49924623 - 49924527
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||| ||| ||||||||||||||| |||||||| ||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  49924623 atactccctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttct 49924527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 229 - 327
Target Start/End: Original strand, 18913301 - 18913400
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaa-aacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    ||||| ||| |||||||||||||||||||| |||||||||||| | |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  18913301 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 18913400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 29488952 - 29488845
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||  ||||||||||||||| | |||||||||||||  ||||||| |||||||||||||||||| ||||||||||||    
T  29488952 atactccctccgtcctaatttataagtcaaaaacactaattcacacttattaagaaaacgaacacttagtgatttgaggtataatttgttgtgttctcct 29488853  T
Q  328 tagaataa 335  Q
    | ||||||    
T  29488852 tggaataa 29488845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 28916485 - 28916578
Alignment:
Q  241 cctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  28916485 cctaatttataag-aaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttcttggaataa 28916578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 228 - 324
Target Start/End: Original strand, 39026201 - 39026298
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaa-aacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||| ||| |||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||  |||||||| |||||||||||||||||||    
T  39026201 atactccctccgtcctaatttataagcaaaaaaacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttct 39026298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 31970276 - 31970372
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||||||| ||||||||| | |||||||||| | | ||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  31970276 gtcctaatttataagcaaaaaatactaattcacacttattaagaagattaacacttagtgatttgaggtatgattttttgtgttctccttggaataa 31970372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 40220262 - 40220153
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacact---taatgatttgaggtataattttttgtgttctc 325  Q
    ||||| ||| ||||||||||| |||||||||||| ||||||| | |||||||||||||| |||||   || |||||||||||||||||||||||||||||    
T  40220262 tactccctccgtcctaatttacaagcaaaaaacagtaattcacacttattaagaaaactaacacttagtagtgatttgaggtataattttttgtgttctc 40220163  T
Q  326 cttagaataa 335  Q
    ||| ||||||    
T  40220162 cttggaataa 40220153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 35189395 - 35189309
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaag-aaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| | ||||||||||||||||||| ||||||    
T  35189395 gtcctaatttataagcaaaaaacactaattcacatttattaagaaaaactaacacttagtaatttgaggtataattttttatgttct 35189309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 246 - 335
Target Start/End: Original strand, 38942414 - 38942504
Alignment:
Q  246 tttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||| || ||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  38942414 tttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 38942504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 328
Target Start/End: Complemental strand, 15285992 - 15285907
Alignment:
Q  242 ctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||||||||| |||||||| ||||||| | |||||||||||||| ||||||| |||||||| |||||||||||||||||||||||    
T  15285992 ctaatttataag-aaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctcctt 15285907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 335
Target Start/End: Complemental strand, 26479930 - 26479836
Alignment:
Q  242 ctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||| || ||||||| | ||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  26479930 ctaatttataagcaaaaaaacaataattcacacttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttctccttaaaataa 26479836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 9128236 - 9128147
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||||||||||||| |||||| | ||||||| | |||||||||||| | ||||||| |||||||||||||| |||||||||||||||||    
T  9128236 gtcctaatttataagtaaaaaatattaattcacacttattaagaaaattaacacttagtgatttgaggtatacttttttgtgttctcctt 9128147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 328
Target Start/End: Original strand, 6848278 - 6848365
Alignment:
Q  240 tcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||| | | ||| ||||||||||||| ||||||||||||||||||    
T  6848278 tcctaatttataagaaaaaaacactaattcacatttattaa-aaaactaataattagtgatttgaggtatgattttttgtgttctcctt 6848365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 323
Target Start/End: Original strand, 45357842 - 45357928
Alignment:
Q  239 gtcctaatttataagcaaaaaacac--taattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttc 323  Q
    |||||||||||||||||||||| ||  ||||||| | ||||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  45357842 gtcctaatttataagcaaaaaaaacattaattcacacttattaagacaactaacacttagtgatttgaggtataattttttgtgttc 45357928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 322
Target Start/End: Complemental strand, 47997140 - 47997064
Alignment:
Q  246 tttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgtt 322  Q
    ||||||||||||||||| ||||||| | |||||||||||||| ||| ||| ||||||||||||| ||||||||||||    
T  47997140 tttataagcaaaaaacagtaattcacacttattaagaaaactaacatttagtgatttgaggtattattttttgtgtt 47997064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 4529365 - 4529300
Alignment:
Q  242 ctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggta 308  Q
    |||||||||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||    
T  4529365 ctaatttataag-aaaaaacactaattcatacttattaagaaaactaacacttagtgatttgaggta 4529300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 35884382 - 35884319
Alignment:
Q  261 cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    ||||| |||| |||||||||||||||| || |||| | ||||||||||||||||||||||||||    
T  35884382 cactagttcacatttattaagaaaactaactcttagtaatttgaggtataattttttgtgttct 35884319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 287
Target Start/End: Complemental strand, 36037441 - 36037382
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaact 287  Q
    |||||| ||| |||| |||||||||||||||||||| |||||| | ||||||||||||||    
T  36037441 atactccctccgtcccaatttataagcaaaaaacacaaattcacacttattaagaaaact 36037382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 36384133 - 36384038
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgtt 322  Q
    ||||||| ||| |||| ||||||||||||||||| || | |||| | |||||||||||  | | || | || ||||||| ||||||||||||||||    
T  36384133 aatactccctccgtcccaatttataagcaaaaaatacaatttcacacttattaagaaagttaaaacattataatttgagatataattttttgtgtt 36384038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 7e-37; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 5121410 - 5121516
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  5121410 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtatagttttttgtgttctcctt 5121509  T
Q  329 agaataa 335  Q
    | |||||    
T  5121510 aaaataa 5121516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 374302 - 374196
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||| | ||||| | ||||||||||||||||||||||||||||||    
T  374302 tactccctccgtcctaatttataagcaaaaaacactaattcacatttattaaaaaaactaatacttagttatttgaggtataattttttgtgttctcctt 374203  T
Q  329 agaataa 335  Q
    |||||||    
T  374202 agaataa 374196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 10228116 - 10228016
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  10228116 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctcct 10228017  T
Q  328 t 328  Q
    |    
T  10228016 t 10228016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 17721762 - 17721869
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||| ||||||| | |||||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  17721762 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcct 17721861  T
Q  328 tagaataa 335  Q
    | ||||||    
T  17721862 tggaataa 17721869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 12278909 - 12278803
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||||||  ||| ||||||||||||||||||||  |||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  12278909 tactcacttcgtcttaatttataagcaaaaaacatcaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 12278810  T
Q  329 agaataa 335  Q
    |||||||    
T  12278809 agaataa 12278803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 30766639 - 30766543
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  30766639 gtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctccttggaataa 30766543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 240 - 328
Target Start/End: Complemental strand, 30949327 - 30949239
Alignment:
Q  240 tcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||||||||||||||||||| ||||||||| | ||||||| |||||| ||| ||| ||||||||||||||||||||||||||||||||    
T  30949327 tcctaatttataagcaaaaaatactaattcacacttattaacaaaactaacatttattgatttgaggtataattttttgtgttctcctt 30949239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 335
Target Start/End: Complemental strand, 17598450 - 17598390
Alignment:
Q  275 tattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||||||| || ||||||    
T  17598450 tattaagaaaattaacacttaatgatttgaggtataattttttgtgttctctttggaataa 17598390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 17599516 - 17599464
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaa 280  Q
    |||||| ||| |||||||||||||||||||||||| ||||||| | |||||||    
T  17599516 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaa 17599464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 21964145 - 21964054
Alignment:
Q  244 aatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||  | |||||| | ||| ||| |||||| | || || | ||| ||| ||||||||||||||||||||||| |||||    
T  21964145 aatttataagcaaaaaaatccaattcacacttactaataaaactaaaacatagtaattagagatataattttttgtgttctccttaaaataa 21964054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 31887074 - 31887168
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgtt 322  Q
    ||||| ||| || ||||||||||||||||||| || ||||| | | ||||||| |||||| ||||| | ||||||||  ||| ||||||||||||    
T  31887074 tactccctccgttctaatttataagcaaaaaaacattaatttacacttattaataaaactaacactcagtgatttgatatatgattttttgtgtt 31887168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 7e-37; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 31316755 - 31316861
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  31316755 tactccctccgtcctaatttataagcaaaaaacactaattcacagttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 31316854  T
Q  329 agaataa 335  Q
     ||||||    
T  31316855 ggaataa 31316861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 35462672 - 35462772
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  35462672 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgttttctcct 35462771  T
Q  328 t 328  Q
    |    
T  35462772 t 35462772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 25962400 - 25962508
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| |||||||||||||||||||||| | ||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  25962400 aatactccctccgtcctaatttataagcaaaaaagaataattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 25962499  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  25962500 ttggaataa 25962508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 229 - 328
Target Start/End: Original strand, 8145967 - 8146066
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||| ||||||| | |||||||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  8145967 tactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctcctt 8146066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 20915065 - 20914958
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| |||||| ||||||||||||||||||| ||||||||| | |||||||||||||| ||||||| |||||| || |||||||||||||||||||||    
T  20915065 atactccctctgtgctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttaagatataattttttgtgttctcct 20914966  T
Q  328 tagaataa 335  Q
    | ||||||    
T  20914965 tggaataa 20914958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 242 - 335
Target Start/End: Complemental strand, 13146921 - 13146828
Alignment:
Q  242 ctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||    
T  13146921 ctaatttataagcaaaaaatactaattcatacttattatgaaaactaacacttagtgatttgaggtataattttttgtgttctctttggaataa 13146828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 8541528 - 8541624
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| ||||||    
T  8541528 gtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattcttcttggaataa 8541624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 229 - 324
Target Start/End: Complemental strand, 42365240 - 42365145
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    ||||| ||| || |||||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||||||||    
T  42365240 tactccctccgttctaatttataagtaaaaaacactaattcatatttattaagaaaactaatacttagtgatttgaggtacaattttttgtgttct 42365145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 12639083 - 12638988
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||| |||||||||||||||| | |||||||||||||| ||| ||| | |||||||||||||||||||||||||||||| ||||||    
T  12639083 gtcctaatttataag-aaaaaacactaattcacacttattaagaaaactaacatttagttatttgaggtataattttttgtgttctccttggaataa 12638988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 16286047 - 16286143
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||| |||||||| ||||||| | |||||||||||| | ||||||| ||||||||||||||||||||||||||||| || ||||||    
T  16286047 gtcctaatttataagtaaaaaacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctctttggaataa 16286143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 243 - 335
Target Start/End: Original strand, 24432368 - 24432460
Alignment:
Q  243 taatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||  |||||| | ||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  24432368 taatttataataaaaaaagattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 24432460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 31690588 - 31690678
Alignment:
Q  243 taatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaat 333  Q
    |||||||||||||||||| ||||||||| | |||||||||||| | | ||||| |||||||||||||||||||||||||||| ||| ||||    
T  31690588 taatttataagcaaaaaatactaattcacacttattaagaaaattaatacttagtgatttgaggtataattttttgtgttcttcttggaat 31690678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 37066206 - 37066283
Alignment:
Q  258 aaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||| ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||    
T  37066206 aaacagtaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattcttcttggaataa 37066283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 30086499 - 30086601
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataatttttt-gtgttctc 325  Q
    |||||| ||| || ||||||||||||||||||| || ||||||| | |||||||||||||| ||| ||| | ||||||||||||||||||| ||||||||    
T  30086499 atactccctccgttctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacatttagtaatttgaggtataattttttcgtgttctc 30086598  T
Q  326 ctt 328  Q
    |||    
T  30086599 ctt 30086601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 24439779 - 24439671
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||||||| ||||||||||||||||||||||||| | |||| | ||||||| |||  | | || | || ||||||| |||||||||||||||| | |    
T  24439779 aatactcactccgtcctaatttataagcaaaaaacacaatttcacacttattaaaaaagttaaaacattataatttgagatataattttttgtgttattc 24439680  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  24439679 ttggaataa 24439671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 322
Target Start/End: Original strand, 36413890 - 36413983
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgtt 322  Q
    ||||| ||| |||||||||||||| |||||||||| |||||| | |||||||||||||  | || || |  |||||| ||||||||||||||||    
T  36413890 tactccctccgtcctaatttataaacaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgagatataattttttgtgtt 36413983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 79; Significance: 7e-37; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 792309 - 792415
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  792309 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 792408  T
Q  329 agaataa 335  Q
     ||||||    
T  792409 ggaataa 792415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 21539960 - 21539854
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  21539960 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 21539861  T
Q  329 agaataa 335  Q
     ||||||    
T  21539860 ggaataa 21539854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 328
Target Start/End: Original strand, 15858641 - 15858741
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  15858641 atactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcct 15858740  T
Q  328 t 328  Q
    |    
T  15858741 t 15858741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 38549594 - 38549702
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  38549594 aatactccctctgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattctcc 38549693  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  38549694 ttggaataa 38549702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 14565325 - 14565432
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  14565325 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 14565424  T
Q  328 tagaataa 335  Q
    | ||||||    
T  14565425 tggaataa 14565432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 335
Target Start/End: Complemental strand, 35832604 - 35832509
Alignment:
Q  240 tcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  35832604 tcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 35832509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 38071403 - 38071509
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||| |||||||||||||| ||||||||    
T  38071403 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctcctt 38071502  T
Q  329 agaataa 335  Q
    |||||||    
T  38071503 agaataa 38071509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 43451708 - 43451602
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||| ||| ||| ||||||||||||| ||||||||||||||||||    
T  43451708 tactccctccgtcctaatttataagcaaaaaatactaattcatacttattaagaaaactaacatttagtgatttgaggtatgattttttgtgttctcctt 43451609  T
Q  329 agaataa 335  Q
    |||||||    
T  43451608 agaataa 43451602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 4092216 - 4092108
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| || |||||||||||||||||||||||| |||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  4092216 aatactccctccgttctaatttataagcaaaaaacactacttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 4092117  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  4092116 ttggaataa 4092108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 10979373 - 10979266
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | | |||||||||||| ||||||| |||||||||||||||||||||||||||| ||    
T  10979373 atactccctccgtcctaatttataagcaaaaaacactaattcacactcattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttct 10979274  T
Q  328 tagaataa 335  Q
    | ||||||    
T  10979273 tggaataa 10979266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 29514427 - 29514534
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||| | |||||||||||||||||||||||| ||||    
T  29514427 atactccctccgtcctaatttataagcaaaaaacagtaattcatacttattaaaaaaactaacacttagtaatttgaggtataattttttgtgttatcct 29514526  T
Q  328 tagaataa 335  Q
    ||||||||    
T  29514527 tagaataa 29514534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 240 - 335
Target Start/End: Complemental strand, 28492712 - 28492617
Alignment:
Q  240 tcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||||||||||||||| |||||| ||| | |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||    
T  28492712 tcctaatttataagcaaaaagcactaaatcacacttattaagaaaactaacacttaatgatttgagatataattttttgtgttctccttggaataa 28492617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 29513973 - 29514078
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||||||||||| ||||||| | |||||||||||| | ||||||| | ||||||||||||||||||||||||||||||    
T  29513973 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaa-taacacttagtaatttgaggtataattttttgtgttctcctt 29514071  T
Q  329 agaataa 335  Q
    |||||||    
T  29514072 agaataa 29514078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 10478382 - 10478282
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||| ||||| |||||||||||||||||||||    
T  10478382 atactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgagttgagatataattttttgtgttctcct 10478283  T
Q  328 t 328  Q
    |    
T  10478282 t 10478282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 239 - 335
Target Start/End: Complemental strand, 44804091 - 44803995
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||||||| |||| ||||||| | |||||||||||| | ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  44804091 gtcctaatttataagcaaacaacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctccttggaataa 44803995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 33635541 - 33635433
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| | | ||| ||||||||| |||||||||||||||| | |    
T  33635541 aatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgagatataattttttgtgtttttc 33635442  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  33635441 ttggaataa 33635433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 243 - 324
Target Start/End: Complemental strand, 8784585 - 8784503
Alignment:
Q  243 taatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||||||||||||||| || ||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  8784585 taatttataagcaaaaaaacattaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttct 8784503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 243 - 324
Target Start/End: Original strand, 5091507 - 5091588
Alignment:
Q  243 taatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||||||||||||||| ||||||||| | |||||||||||||| ||||||| ||||||||| ||||||||||||||||||    
T  5091507 taatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttct 5091588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 28424476 - 28424368
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgag--gtataattttttgtgttctcc 326  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||| |||||||||  ||| ||  |||||||||||||    
T  28424476 tactccctccgtcctaatttataagcaaaaaacactaattgatacttattaagaaaactaacacttagtgatttgagatgtaaaaaattttgtgttctcc 28424377  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  28424376 ttggaataa 28424368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 228 - 316
Target Start/End: Complemental strand, 43075953 - 43075865
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttt 316  Q
    |||||| ||| |||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||| ||||||||||| ||||||||    
T  43075953 atactccctccgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgaggtgtaattttt 43075865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 279 - 335
Target Start/End: Original strand, 4033678 - 4033734
Alignment:
Q  279 aagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  4033678 aagaaaactaacacttaatgatttgaggtataattttttgtgttctccttaaaataa 4033734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 315
Target Start/End: Original strand, 38564669 - 38564756
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataatttt 315  Q
    |||||| ||| |||||||||||||| ||||||||  ||||||| | |||||||||||||| ||| ||| |||||||||||||||||||    
T  38564669 atactccctccgtcctaatttataaacaaaaaacgataattcacacttattaagaaaactaacatttagtgatttgaggtataatttt 38564756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 13822730 - 13822829
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgat---ttgaggtataattttttgtgttctccttagaataa 335  Q
    |||| ||||||||||||||||| || |||||| | |||||||||||||  | || || |  |   |||||||||||||||||||||||| ||||||||||    
T  13822730 gtcccaatttataagcaaaaaatacaaattcacacttattaagaaaacaaaaacatactagtattttgaggtataattttttgtgttcttcttagaataa 13822829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 1e-35; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 21654450 - 21654350
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  21654450 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 21654351  T
Q  328 t 328  Q
    |    
T  21654350 t 21654350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 227 - 335
Target Start/End: Original strand, 26641026 - 26641134
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  26641026 aatactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcc 26641125  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  26641126 ttggaataa 26641134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 239 - 335
Target Start/End: Original strand, 45347639 - 45347735
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  45347639 gtcctaatttataagtaaaaaacactaattcatatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataa 45347735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 32322154 - 32322261
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  32322154 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcct 32322253  T
Q  328 tagaataa 335  Q
    | ||||||    
T  32322254 tggaataa 32322261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 55400943 - 55400836
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||| |    
T  55400943 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctctt 55400844  T
Q  328 tagaataa 335  Q
    | ||||||    
T  55400843 tggaataa 55400836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 229 - 328
Target Start/End: Complemental strand, 31126416 - 31126317
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||||||  |||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  31126416 tactccctctgttttaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 31126317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 229 - 328
Target Start/End: Complemental strand, 46580739 - 46580640
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||| || || ||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  46580739 tactcattccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 46580640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 328
Target Start/End: Complemental strand, 34022793 - 34022704
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  34022793 gtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcctt 34022704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 228 - 335
Target Start/End: Complemental strand, 53020388 - 53020281
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||| ||| ||||||||| |||||||||||||||||| ||    
T  53020388 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgagttataattttttgtgttcttct 53020289  T
Q  328 tagaataa 335  Q
    | ||||||    
T  53020288 tggaataa 53020281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 229 - 327
Target Start/End: Complemental strand, 49068255 - 49068157
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    ||||| ||| |||||||||||||||||||||| | ||||||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||    
T  49068255 tactctctccgtcctaatttataagcaaaaaatattaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 49068157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 227 - 335
Target Start/End: Complemental strand, 51426825 - 51426717
Alignment:
Q  227 aatactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcc 326  Q
    ||||||| ||| |||||||||||||||||||||||||||||| |   ||||||| |||||| ||| ||| |||||||||||||||||||||||||||| |    
T  51426825 aatactccctccgtcctaatttataagcaaaaaacactaatttacgcttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttcttc 51426726  T
Q  327 ttagaataa 335  Q
    |||||||||    
T  51426725 ttagaataa 51426717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 37323998 - 37324092
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgtt 322  Q
    |||||| ||| || ||||||||||||||||||||||||||||| | |||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  37323998 atactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgtt 37324092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 239 - 324
Target Start/End: Complemental strand, 46820228 - 46820143
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    ||||||||||||||| ||||| |||||||||| |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  46820228 gtcctaatttataagtaaaaaccactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttct 46820143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 243 - 335
Target Start/End: Complemental strand, 43576147 - 43576055
Alignment:
Q  243 taatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||||||  |||||||||||||||||| |||||||||||| | ||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  43576147 taatttataactaaaaaacactaattcatacttattaagaaaattaacacttagtgatttgaggtatgattttttgtgttctccttcgaataa 43576055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 46295991 - 46296099
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataa-ttttttgtgttctcc 326  Q
    |||||| ||| ||||||||||||||| |||||| ||||||||| | |||||||||||||| ||  ||| ||||||||||||||| |||||||||||||||    
T  46295991 atactccctccgtcctaatttataagtaaaaaatactaattcacacttattaagaaaactaacggttagtgatttgaggtataatttttttgtgttctcc 46296090  T
Q  327 ttagaataa 335  Q
    || ||||||    
T  46296091 ttggaataa 46296099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 239 - 327
Target Start/End: Complemental strand, 51255380 - 51255292
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| |||| || | || ||| ||||||||||||||||||||||    
T  51255380 gtcctaatttataagcaaaaaatattaattcatatttattaagaaaactaacacgtagtaatatgaagtataattttttgtgttctcct 51255292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 228 - 320
Target Start/End: Complemental strand, 23514647 - 23514554
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaa-cactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtg 320  Q
    |||||| ||| ||| |||||||||||||||||| || ||||||| |||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  23514647 atactccctccgtcttaatttataagcaaaaaaacattaattcacatttattaagaaaactaacacttattgatttgaggtataattttgtgtg 23514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 228 - 319
Target Start/End: Complemental strand, 13541438 - 13541347
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgt 319  Q
    |||||| ||| || ||||||||||| ||||||||||||||||| | |||||||||||| | ||||||| | |||||||||||||||||||||    
T  13541438 atactccctccgttctaatttataaccaaaaaacactaattcacacttattaagaaaattaacacttagtaatttgaggtataattttttgt 13541347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 229 - 335
Target Start/End: Original strand, 16739081 - 16739182
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| |||||||||||||||| ||||||||||||||| | |||||||||||||| ||     || |||||||||||||||| |||||||||||||    
T  16739081 tactccctccgtcctaatttataagccaaaaacactaattcacacttattaagaaaactaac-----attatttgaggtataatttgttgtgttctcctt 16739175  T
Q  329 agaataa 335  Q
     ||||||    
T  16739176 ggaataa 16739182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 249 - 335
Target Start/End: Complemental strand, 28793346 - 28793260
Alignment:
Q  249 ataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||| |||||| | ||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||| ||||| ||||||    
T  28793346 ataagtaaaaaataataattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttatccttggaataa 28793260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 229 - 335
Target Start/End: Complemental strand, 52252237 - 52252134
Alignment:
Q  229 tactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    ||||| ||| ||||||||||||||| |||||| | ||||||||| |||   |||||||| ||||||| |||||||| ||||||||||||||||||| |||    
T  52252237 tactccctccgtcctaatttataagtaaaaaatattaattcatactta---agaaaactaacacttagtgatttgaagtataattttttgtgttcttctt 52252141  T
Q  329 agaataa 335  Q
     ||||||    
T  52252140 ggaataa 52252134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 335
Target Start/End: Complemental strand, 1335297 - 1335208
Alignment:
Q  246 tttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    |||||||| |||||||| ||||||| | |||||||||||||| | ||||| || |||||| ||| |||||||||||||||||| ||||||    
T  1335297 tttataagaaaaaaacattaattcacacttattaagaaaactaatacttagtgttttgagatattattttttgtgttctccttggaataa 1335208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 281 - 335
Target Start/End: Complemental strand, 45781549 - 45781495
Alignment:
Q  281 gaaaactgacacttaatgatttgaggtataattttttgtgttctccttagaataa 335  Q
    ||||||| ||||||| |||||||| |||||||||||||||||||| |||||||||    
T  45781549 gaaaactaacacttagtgatttgatgtataattttttgtgttctctttagaataa 45781495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 36188937 - 36189021
Alignment:
Q  244 aatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcctt 328  Q
    |||||||||||||||||||| |||||| | ||||||||||| || | ||  | | |||||||||||| |||||||| ||||||||    
T  36188937 aatttataagcaaaaaacacaaattcacacttattaagaaatctaaaacacagtaatttgaggtatagttttttgtattctcctt 36189021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 45782371 - 45782326
Alignment:
Q  240 tcctaatttataagcaaaaaacactaattcatatttattaagaaaa 285  Q
    ||||||||||||||||||||||||||||| | ||||||||| ||||    
T  45782371 tcctaatttataagcaaaaaacactaatttacatttattaaaaaaa 45782326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 52171976 - 52172029
Alignment:
Q  229 tactcactctgtcctaatttataagc--aaaaaacactaattcatatttattaa 280  Q
    ||||| ||| || |||||||||||||  ||||||||||||||||||||||||||    
T  52171976 tactccctccgttctaatttataagcgaaaaaaacactaattcatatttattaa 52172029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 46303767 - 46303687
Alignment:
Q  244 aatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttct 324  Q
    |||||||||| |||||| |  ||||||||||||||||||||||| | || || | |||| |  ||||||||||| ||||||    
T  46303767 aatttataagaaaaaaatatcaattcatatttattaagaaaactaaaacatagtaatttaaaatataattttttatgttct 46303687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 54464818 - 54464902
Alignment:
Q  239 gtcctaatttataagcaaaaaacactaat-tcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgtt 322  Q
    ||||||| |||||||||||||| |  ||  ||| |||||||||||||||| | || |||  |||||| |||||||||||||||||    
T  54464818 gtcctaaattataagcaaaaaaaaaaaaaatcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgtt 54464902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 228 - 328
Target Start/End: Complemental strand, 4834 - 4734
Alignment:
Q  228 atactcactctgtcctaatttataagcaaaaaacactaattcatatttattaagaaaactgacacttaatgatttgaggtataattttttgtgttctcct 327  Q
    |||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  4834 atactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctcct 4735  T
Q  328 t 328  Q
    |    
T  4734 t 4734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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