View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5329_low_3 (Length: 508)

Name: NF5329_low_3
Description: NF5329
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5329_low_3
NF5329_low_3
[»] chr3 (103 HSPs)
chr3 (216-393)||(3895096-3895273)
chr3 (1-115)||(7639430-7639544)
chr3 (1-84)||(19265928-19266011)
chr3 (1-71)||(39850528-39850598)
chr3 (1-54)||(3894916-3894969)
chr3 (1-66)||(13875479-13875543)
chr3 (1-66)||(18461332-18461397)
chr3 (1-115)||(22004428-22004542)
chr3 (1-115)||(22011945-22012059)
chr3 (1-82)||(35379337-35379418)
chr3 (2-84)||(5530582-5530664)
chr3 (7-63)||(5907338-5907395)
chr3 (10-66)||(14899882-14899939)
chr3 (1-84)||(3418777-3418861)
chr3 (1-84)||(30102543-30102627)
chr3 (1-64)||(41817177-41817241)
chr3 (217-270)||(265159-265212)
chr3 (1-66)||(9350099-9350163)
chr3 (4-84)||(27947732-27947811)
chr3 (1-64)||(36161305-36161368)
chr3 (216-270)||(7639654-7639708)
chr3 (1-66)||(21078640-21078706)
chr3 (220-270)||(42896632-42896682)
chr3 (216-270)||(49758237-49758291)
chr3 (20-84)||(50099013-50099079)
chr3 (216-266)||(50099206-50099256)
chr3 (220-265)||(13043141-13043186)
chr3 (220-265)||(13051218-13051263)
chr3 (20-84)||(40360328-40360393)
chr3 (16-84)||(45885797-45885865)
chr3 (216-264)||(17438582-17438630)
chr3 (19-66)||(21030599-21030647)
chr3 (11-66)||(22102415-22102471)
chr3 (11-66)||(22177363-22177419)
chr3 (11-66)||(35938811-35938867)
chr3 (11-66)||(45644116-45644172)
chr3 (406-493)||(3895378-3895474)
chr3 (216-255)||(18461142-18461181)
chr3 (216-263)||(22177561-22177608)
chr3 (216-270)||(26130972-26131027)
chr3 (17-66)||(18722148-18722198)
chr3 (1-83)||(18874736-18874818)
chr3 (220-266)||(19245528-19245574)
chr3 (216-270)||(22102612-22102666)
chr3 (1-66)||(29542109-29542175)
chr3 (16-73)||(35379864-35379919)
chr3 (7-60)||(50483633-50483687)
chr3 (216-269)||(5811942-5811995)
chr3 (10-66)||(14418974-14419031)
chr3 (11-59)||(19420173-19420222)
chr3 (219-264)||(54768140-54768185)
chr3 (217-265)||(285666-285714)
chr3 (1-115)||(13476028-13476139)
chr3 (11-66)||(17476359-17476415)
chr3 (1-84)||(21824425-21824509)
chr3 (18-66)||(27398182-27398230)
chr3 (1-84)||(39903915-39903996)
chr3 (216-256)||(41817387-41817427)
chr3 (1-84)||(51006156-51006240)
chr3 (1-63)||(3890220-3890283)
chr3 (217-256)||(5492835-5492874)
chr3 (216-255)||(9350321-9350360)
chr3 (216-263)||(9862262-9862309)
chr3 (216-255)||(19225119-19225158)
chr3 (219-270)||(27947952-27948003)
chr3 (19-66)||(30805910-30805957)
chr3 (11-57)||(52957624-52957671)
chr3 (11-64)||(796443-796497)
chr3 (21-66)||(5812121-5812167)
chr3 (216-270)||(5907140-5907194)
chr3 (1-66)||(17586897-17586963)
chr3 (25-70)||(21495568-21495614)
chr3 (216-262)||(21790321-21790367)
chr3 (220-270)||(22152459-22152509)
chr3 (216-270)||(22258430-22258484)
chr3 (25-66)||(24488029-24488071)
chr3 (224-266)||(25478954-25478996)
chr3 (220-266)||(35379563-35379609)
chr3 (1-66)||(42391904-42391970)
chr3 (1-66)||(49429695-49429758)
chr3 (11-59)||(3266916-3266965)
chr3 (11-63)||(5492508-5492561)
chr3 (22-66)||(7791287-7791332)
chr3 (219-268)||(10438466-10438515)
chr3 (219-264)||(18388610-18388655)
chr3 (221-266)||(21091804-21091849)
chr3 (217-270)||(25842533-25842586)
chr3 (10-66)||(27042320-27042377)
chr3 (11-63)||(38809361-38809414)
chr3 (22-66)||(45879791-45879836)
chr3 (216-253)||(46931749-46931786)
chr3 (31-84)||(51833829-51833882)
chr3 (219-263)||(796651-796695)
chr3 (25-84)||(1149360-1149420)
chr3 (216-272)||(4615357-4615412)
chr3 (217-257)||(12141379-12141419)
chr3 (216-256)||(18540391-18540431)
chr3 (221-265)||(21495759-21495803)
chr3 (23-66)||(37431513-37431557)
chr3 (11-66)||(38358648-38358701)
chr3 (16-59)||(39822632-39822676)
chr3 (217-257)||(39903759-39903799)
chr3 (216-256)||(45879993-45880033)
[»] chr2 (75 HSPs)
chr2 (216-393)||(42057034-42057209)
chr2 (1-115)||(42057313-42057427)
chr2 (1-84)||(33134766-33134849)
chr2 (1-66)||(21839578-21839643)
chr2 (1-84)||(6941525-6941608)
chr2 (1-84)||(33312947-33313030)
chr2 (406-469)||(42056866-42056929)
chr2 (1-66)||(13450131-13450196)
chr2 (1-66)||(40633462-40633527)
chr2 (216-270)||(9191988-9192042)
chr2 (16-84)||(12069444-12069513)
chr2 (1-81)||(8062822-8062902)
chr2 (1-84)||(30977001-30977085)
chr2 (11-66)||(41122666-41122722)
chr2 (216-263)||(41014472-41014519)
chr2 (1-66)||(3357708-3357771)
chr2 (216-270)||(15265766-15265820)
chr2 (1-71)||(32114565-32114635)
chr2 (216-270)||(41633373-41633427)
chr2 (221-270)||(13450352-13450401)
chr2 (217-270)||(44019864-44019917)
chr2 (11-66)||(10553173-10553229)
chr2 (11-66)||(33676747-33676803)
chr2 (2-65)||(42651837-42651901)
chr2 (11-84)||(7537257-7537331)
chr2 (224-270)||(8875285-8875331)
chr2 (11-60)||(15265565-15265615)
chr2 (20-66)||(42949736-42949782)
chr2 (224-265)||(13594086-13594127)
chr2 (220-257)||(21839803-21839840)
chr2 (221-270)||(21885154-21885203)
chr2 (216-261)||(27359860-27359905)
chr2 (217-270)||(34753399-34753452)
chr2 (11-66)||(19813909-19813965)
chr2 (11-66)||(35125963-35126019)
chr2 (229-272)||(14371597-14371640)
chr2 (221-264)||(17373853-17373896)
chr2 (1-66)||(18072358-18072427)
chr2 (226-261)||(20579287-20579322)
chr2 (16-66)||(24100671-24100722)
chr2 (216-263)||(34063422-34063469)
chr2 (23-65)||(44020061-44020104)
chr2 (25-66)||(963281-963323)
chr2 (11-84)||(7536825-7536898)
chr2 (1-66)||(9243697-9243763)
chr2 (25-66)||(19063875-19063917)
chr2 (21-66)||(31593519-31593565)
chr2 (25-66)||(38702257-38702299)
chr2 (11-84)||(41384502-41384576)
chr2 (216-266)||(42060229-42060279)
chr2 (1-66)||(43709551-43709617)
chr2 (219-264)||(9169947-9169992)
chr2 (216-269)||(22277727-22277780)
chr2 (221-270)||(24004405-24004454)
chr2 (221-266)||(33134359-33134404)
chr2 (11-66)||(36080220-36080279)
chr2 (216-261)||(45407197-45407242)
chr2 (1-65)||(3357375-3357438)
chr2 (11-66)||(7603685-7603741)
chr2 (1-64)||(9192161-9192225)
chr2 (37-84)||(12069660-12069708)
chr2 (16-63)||(12413120-12413168)
chr2 (16-63)||(12425180-12425228)
chr2 (224-272)||(14706464-14706512)
chr2 (23-66)||(16039352-16039396)
chr2 (220-252)||(24004934-24004966)
chr2 (216-256)||(25915055-25915095)
chr2 (11-66)||(27913065-27913121)
chr2 (11-66)||(28284272-28284328)
chr2 (216-272)||(29462882-29462938)
chr2 (219-263)||(35916904-35916948)
chr2 (22-65)||(35959993-35960037)
chr2 (220-252)||(36817354-36817386)
chr2 (216-272)||(38147818-38147874)
chr2 (11-66)||(39271620-39271676)
[»] chr5 (87 HSPs)
chr5 (1-115)||(43370121-43370235)
chr5 (1-81)||(6061968-6062048)
chr5 (1-81)||(40493849-40493929)
chr5 (19-115)||(32234561-32234657)
chr5 (1-84)||(32904462-32904545)
chr5 (217-270)||(936320-936373)
chr5 (1-81)||(19288811-19288890)
chr5 (11-84)||(834200-834274)
chr5 (222-272)||(35272229-35272279)
chr5 (1-66)||(36226453-36226519)
chr5 (1-58)||(1134683-1134740)
chr5 (221-266)||(16313452-16313497)
chr5 (16-81)||(38180123-38180188)
chr5 (16-81)||(38190943-38191008)
chr5 (16-81)||(38207347-38207412)
chr5 (16-81)||(38218168-38218233)
chr5 (10-66)||(42516185-42516242)
chr5 (16-84)||(13577790-13577858)
chr5 (220-272)||(42506447-42506499)
chr5 (1-48)||(248377-248424)
chr5 (220-270)||(9524091-9524141)
chr5 (216-270)||(14000663-14000717)
chr5 (1-66)||(17210552-17210618)
chr5 (16-62)||(17261004-17261050)
chr5 (1-66)||(19128617-19128683)
chr5 (11-84)||(25754565-25754639)
chr5 (1-59)||(33550419-33550477)
chr5 (11-84)||(38697000-38697074)
chr5 (16-66)||(39955835-39955885)
chr5 (10-66)||(8786726-8786783)
chr5 (10-59)||(19515296-19515345)
chr5 (10-66)||(39850830-39850887)
chr5 (11-66)||(8943327-8943383)
chr5 (11-66)||(12659361-12659417)
chr5 (11-66)||(17916102-17916158)
chr5 (216-272)||(28766484-28766540)
chr5 (216-264)||(39956005-39956053)
chr5 (7-54)||(9523876-9523923)
chr5 (28-66)||(9514779-9514817)
chr5 (216-270)||(19929638-19929692)
chr5 (10-63)||(22702279-22702333)
chr5 (216-270)||(23270848-23270902)
chr5 (216-270)||(24836945-24836999)
chr5 (224-270)||(28867406-28867452)
chr5 (1-66)||(28867602-28867668)
chr5 (1-66)||(42097474-42097540)
chr5 (1-66)||(42506209-42506275)
chr5 (221-270)||(834021-834070)
chr5 (11-66)||(7649071-7649130)
chr5 (216-261)||(8231071-8231116)
chr5 (11-63)||(18526931-18526984)
chr5 (22-66)||(23206843-23206888)
chr5 (216-265)||(31659582-31659631)
chr5 (216-252)||(248789-248825)
chr5 (11-62)||(832178-832230)
chr5 (219-255)||(9514963-9514999)
chr5 (224-272)||(19018840-19018888)
chr5 (11-66)||(19650706-19650762)
chr5 (218-254)||(19650851-19650887)
chr5 (11-66)||(24836761-24836817)
chr5 (11-66)||(28003240-28003296)
chr5 (216-264)||(33168470-33168518)
chr5 (11-66)||(36337371-36337431)
chr5 (16-63)||(38455501-38455549)
chr5 (1-66)||(25782016-25782085)
chr5 (216-263)||(38455300-38455347)
chr5 (224-270)||(1611834-1611880)
chr5 (216-270)||(6062191-6062245)
chr5 (217-267)||(17014231-17014281)
chr5 (7-60)||(19506660-19506714)
chr5 (1-66)||(26269392-26269458)
chr5 (92-134)||(39955932-39955974)
chr5 (17-66)||(41613045-41613095)
chr5 (25-66)||(42207841-42207883)
chr5 (221-258)||(7937954-7937991)
chr5 (224-269)||(31180965-31181010)
chr5 (11-58)||(1093809-1093857)
chr5 (11-66)||(1611546-1611602)
chr5 (11-66)||(1612004-1612060)
chr5 (225-265)||(3295810-3295850)
chr5 (16-66)||(8990350-8990404)
chr5 (1-64)||(10542994-10543058)
chr5 (216-256)||(20176321-20176361)
chr5 (22-65)||(25793686-25793730)
chr5 (216-264)||(28868144-28868192)
chr5 (7-66)||(35402834-35402894)
chr5 (11-66)||(40716224-40716280)
[»] chr4 (63 HSPs)
chr4 (4-115)||(37143296-37143407)
chr4 (1-111)||(50179282-50179392)
chr4 (1-84)||(27088477-27088560)
chr4 (11-66)||(47931362-47931418)
chr4 (1-81)||(20702512-20702593)
chr4 (217-270)||(20702719-20702772)
chr4 (11-66)||(2358636-2358692)
chr4 (216-272)||(5720230-5720286)
chr4 (11-66)||(6196639-6196695)
chr4 (19-111)||(26007773-26007866)
chr4 (216-263)||(17702659-17702706)
chr4 (16-66)||(4958926-4958976)
chr4 (1-66)||(35447682-35447748)
chr4 (1-84)||(20702341-20702426)
chr4 (1-115)||(20964734-20964848)
chr4 (4-84)||(21796289-21796369)
chr4 (216-272)||(23091131-23091187)
chr4 (16-66)||(41169169-41169220)
chr4 (216-266)||(161001-161051)
chr4 (217-263)||(669829-669875)
chr4 (17-71)||(10727357-10727411)
chr4 (17-71)||(10941126-10941180)
chr4 (10-63)||(21122266-21122320)
chr4 (221-267)||(37143614-37143660)
chr4 (1-66)||(46251242-46251308)
chr4 (1-66)||(50561236-50561302)
chr4 (21-66)||(52954096-52954142)
chr4 (219-264)||(5190629-5190674)
chr4 (217-270)||(7438071-7438124)
chr4 (18-62)||(12214590-12214635)
chr4 (11-59)||(44470277-44470326)
chr4 (11-66)||(5498717-5498773)
chr4 (216-272)||(5499199-5499255)
chr4 (11-66)||(9779199-9779255)
chr4 (1-115)||(11064463-11064575)
chr4 (224-272)||(17702387-17702435)
chr4 (216-272)||(26088916-26088971)
chr4 (216-267)||(11064306-11064357)
chr4 (219-266)||(35519269-35519316)
chr4 (216-263)||(37143138-37143185)
chr4 (1-66)||(2133524-2133590)
chr4 (20-65)||(5099508-5099554)
chr4 (11-84)||(5662103-5662177)
chr4 (10-63)||(13204196-13204250)
chr4 (1-66)||(26054476-26054542)
chr4 (216-266)||(35034636-35034685)
chr4 (21-66)||(36802619-36802665)
chr4 (10-66)||(46620651-46620711)
chr4 (221-270)||(23986111-23986160)
chr4 (11-59)||(29097591-29097640)
chr4 (16-84)||(32023441-32023510)
chr4 (219-272)||(35447490-35447543)
chr4 (11-66)||(1397178-1397234)
chr4 (220-272)||(10128619-10128671)
chr4 (224-264)||(15849755-15849795)
chr4 (216-264)||(21122420-21122468)
chr4 (11-63)||(23432191-23432243)
chr4 (11-66)||(26427136-26427191)
chr4 (20-63)||(29629918-29629962)
chr4 (216-252)||(34659435-34659471)
chr4 (216-256)||(37013133-37013173)
chr4 (11-66)||(50412928-50412984)
chr4 (11-66)||(51400141-51400197)
[»] chr8 (56 HSPs)
chr8 (1-66)||(1759576-1759641)
chr8 (5-66)||(26527319-26527380)
chr8 (1-84)||(13149916-13149999)
chr8 (1-84)||(34966685-34966769)
chr8 (1-57)||(36342445-36342501)
chr8 (1-81)||(36342946-36343026)
chr8 (1-84)||(33377964-33378046)
chr8 (216-270)||(4430033-4430087)
chr8 (1-83)||(33480840-33480921)
chr8 (222-272)||(38804478-38804528)
chr8 (1-66)||(4415090-4415154)
chr8 (1-66)||(13469156-13469221)
chr8 (11-66)||(15898764-15898820)
chr8 (224-266)||(11938017-11938059)
chr8 (216-270)||(18994563-18994617)
chr8 (1-66)||(41942502-41942568)
chr8 (217-270)||(5918833-5918886)
chr8 (11-66)||(1554768-1554824)
chr8 (22-66)||(11904023-11904067)
chr8 (219-270)||(26784856-26784907)
chr8 (11-65)||(38498495-38498550)
chr8 (216-266)||(1759469-1759519)
chr8 (220-270)||(11916124-11916174)
chr8 (216-266)||(13150141-13150191)
chr8 (16-65)||(26784652-26784702)
chr8 (1-66)||(27020514-27020580)
chr8 (1-66)||(30264241-30264307)
chr8 (11-60)||(45440655-45440705)
chr8 (11-59)||(444289-444338)
chr8 (11-66)||(3739574-3739630)
chr8 (11-66)||(4535950-4536006)
chr8 (11-66)||(10865176-10865232)
chr8 (216-256)||(15044121-15044160)
chr8 (219-263)||(15916926-15916970)
chr8 (11-66)||(15919568-15919624)
chr8 (16-63)||(25722799-25722847)
chr8 (16-66)||(18638214-18638265)
chr8 (11-63)||(2692062-2692116)
chr8 (1-66)||(11937803-11937869)
chr8 (25-66)||(16326632-16326674)
chr8 (224-266)||(18279191-18279233)
chr8 (220-266)||(27837753-27837799)
chr8 (1-66)||(41666771-41666837)
chr8 (218-271)||(3825395-3825448)
chr8 (1-66)||(7019939-7020007)
chr8 (11-59)||(15872091-15872140)
chr8 (7-59)||(32856641-32856694)
chr8 (1-66)||(45488956-45489024)
chr8 (11-66)||(288765-288821)
chr8 (11-66)||(1170500-1170556)
chr8 (11-66)||(1566230-1566286)
chr8 (221-269)||(5625967-5626015)
chr8 (220-272)||(12838771-12838823)
chr8 (216-252)||(14436503-14436539)
chr8 (218-266)||(15898963-15899011)
chr8 (11-66)||(18279384-18279440)
[»] chr1 (95 HSPs)
chr1 (1-66)||(31845092-31845157)
chr1 (1-84)||(2666148-2666231)
chr1 (1-84)||(37706029-37706112)
chr1 (1-115)||(1581173-1581285)
chr1 (16-66)||(8096242-8096292)
chr1 (1-115)||(14746423-14746534)
chr1 (1-115)||(16143424-16143539)
chr1 (1-66)||(12267050-12267116)
chr1 (21-115)||(28041418-28041512)
chr1 (1-84)||(1531263-1531346)
chr1 (16-111)||(11842962-11843057)
chr1 (217-279)||(15597531-15597593)
chr1 (11-83)||(11344934-11345007)
chr1 (217-270)||(34011037-34011090)
chr1 (1-60)||(20906751-20906811)
chr1 (219-266)||(5880743-5880790)
chr1 (1-66)||(115899-115965)
chr1 (216-270)||(10729246-10729300)
chr1 (216-266)||(11842800-11842850)
chr1 (4-66)||(50946239-50946301)
chr1 (1-81)||(7297239-7297318)
chr1 (11-66)||(13303938-13303994)
chr1 (11-66)||(16424479-16424535)
chr1 (11-66)||(33326787-33326843)
chr1 (216-256)||(37705670-37705710)
chr1 (219-270)||(5965569-5965620)
chr1 (12-66)||(8699277-8699332)
chr1 (16-66)||(13315239-13315290)
chr1 (216-267)||(15470661-15470712)
chr1 (216-279)||(27926631-27926694)
chr1 (1-71)||(33193916-33193986)
chr1 (1-66)||(12264878-12264944)
chr1 (11-60)||(23929016-23929066)
chr1 (216-270)||(26342847-26342901)
chr1 (1-66)||(31528620-31528686)
chr1 (1-66)||(34969362-34969428)
chr1 (1-66)||(43723895-43723961)
chr1 (1-66)||(45943276-45943342)
chr1 (1-66)||(46880046-46880112)
chr1 (216-266)||(46880213-46880263)
chr1 (1-66)||(52043363-52043429)
chr1 (227-272)||(650142-650187)
chr1 (22-66)||(12301022-12301067)
chr1 (19-71)||(28071627-28071680)
chr1 (22-66)||(47576727-47576772)
chr1 (11-59)||(49162683-49162732)
chr1 (219-272)||(50944450-50944503)
chr1 (216-252)||(4968856-4968892)
chr1 (10-61)||(8574010-8574062)
chr1 (229-269)||(9971887-9971927)
chr1 (11-66)||(13315111-13315167)
chr1 (225-269)||(34749026-34749070)
chr1 (217-257)||(44921755-44921795)
chr1 (7-62)||(46273521-46273577)
chr1 (11-66)||(48419984-48420040)
chr1 (220-268)||(49162919-49162967)
chr1 (28-66)||(898925-898964)
chr1 (16-66)||(21343898-21343949)
chr1 (16-66)||(21348763-21348814)
chr1 (16-66)||(23660339-23660390)
chr1 (216-263)||(33933961-33934008)
chr1 (216-271)||(40368202-40368256)
chr1 (221-270)||(1531071-1531121)
chr1 (224-266)||(1581027-1581069)
chr1 (216-266)||(8574243-8574293)
chr1 (219-265)||(15476624-15476670)
chr1 (222-256)||(20906968-20907002)
chr1 (1-66)||(25298038-25298104)
chr1 (228-266)||(27307624-27307662)
chr1 (25-66)||(40808774-40808816)
chr1 (219-261)||(43723708-43723750)
chr1 (220-270)||(47402461-47402511)
chr1 (10-66)||(50943908-50943968)
chr1 (11-59)||(7548429-7548478)
chr1 (216-265)||(11345133-11345182)
chr1 (221-262)||(12780433-12780474)
chr1 (220-265)||(16424684-16424729)
chr1 (221-266)||(25821962-25822007)
chr1 (10-66)||(35673710-35673767)
chr1 (225-266)||(44648438-44648479)
chr1 (219-272)||(44667964-44668017)
chr1 (16-60)||(46022385-46022430)
chr1 (220-264)||(2666375-2666419)
chr1 (218-266)||(4242263-4242311)
chr1 (221-265)||(9822457-9822501)
chr1 (216-264)||(11409177-11409225)
chr1 (2-46)||(12266925-12266969)
chr1 (23-66)||(21335042-21335086)
chr1 (217-257)||(23655233-23655273)
chr1 (216-272)||(24004843-24004899)
chr1 (1-45)||(33934207-33934251)
chr1 (222-270)||(40808574-40808622)
chr1 (11-66)||(43575664-43575720)
chr1 (220-252)||(50946020-50946052)
chr1 (22-66)||(52397137-52397181)
[»] chr6 (49 HSPs)
chr6 (1-84)||(2485891-2485974)
chr6 (1-84)||(2441410-2441492)
chr6 (1-118)||(16187017-16187133)
chr6 (1-66)||(28712005-28712071)
chr6 (1-115)||(11323313-11323425)
chr6 (11-66)||(28592550-28592606)
chr6 (219-267)||(33573663-33573711)
chr6 (1-71)||(10460111-10460182)
chr6 (1-71)||(1190494-1190564)
chr6 (11-84)||(31861840-31861914)
chr6 (216-265)||(32531312-32531361)
chr6 (219-267)||(9894247-9894295)
chr6 (11-66)||(14965230-14965286)
chr6 (16-66)||(14426643-14426694)
chr6 (1-66)||(7451734-7451800)
chr6 (1-66)||(10343415-10343481)
chr6 (221-263)||(10587658-10587700)
chr6 (220-270)||(12169696-12169746)
chr6 (1-66)||(17942733-17942799)
chr6 (17-62)||(22535086-22535132)
chr6 (220-270)||(24062809-24062859)
chr6 (11-59)||(6001403-6001452)
chr6 (16-64)||(32531125-32531174)
chr6 (7-66)||(12169909-12169969)
chr6 (220-272)||(21104758-21104810)
chr6 (216-271)||(4996722-4996777)
chr6 (224-263)||(10343228-10343267)
chr6 (219-270)||(17264146-17264197)
chr6 (1-66)||(20715818-20715885)
chr6 (216-247)||(22534902-22534933)
chr6 (16-66)||(22838343-22838394)
chr6 (220-271)||(26251765-26251816)
chr6 (216-267)||(28592858-28592909)
chr6 (227-261)||(1212059-1212093)
chr6 (25-66)||(14662355-14662397)
chr6 (25-66)||(17353115-17353157)
chr6 (11-83)||(19146170-19146244)
chr6 (21-66)||(23124400-23124446)
chr6 (11-60)||(26252976-26253026)
chr6 (216-269)||(1190713-1190765)
chr6 (219-260)||(5442438-5442479)
chr6 (225-266)||(6874952-6874993)
chr6 (11-66)||(13240726-13240785)
chr6 (218-266)||(2441635-2441683)
chr6 (11-66)||(3833902-3833958)
chr6 (1-45)||(4997017-4997061)
chr6 (11-66)||(8771734-8771790)
chr6 (18-53)||(17259463-17259499)
chr6 (221-261)||(32349216-32349256)
[»] chr7 (63 HSPs)
chr7 (1-115)||(30240816-30240930)
chr7 (1-66)||(8390326-8390391)
chr7 (11-84)||(8949000-8949073)
chr7 (219-270)||(15646954-15647005)
chr7 (216-270)||(25617441-25617494)
chr7 (220-270)||(39435170-39435220)
chr7 (1-66)||(12170518-12170583)
chr7 (216-265)||(21766028-21766077)
chr7 (1-81)||(47901756-47901836)
chr7 (220-272)||(10199472-10199524)
chr7 (11-66)||(19371720-19371776)
chr7 (219-266)||(1787153-1787200)
chr7 (14-81)||(6474785-6474852)
chr7 (1-66)||(4550295-4550361)
chr7 (16-115)||(5800239-5800337)
chr7 (216-266)||(5800443-5800493)
chr7 (2-115)||(10199633-10199748)
chr7 (1-83)||(27722896-27722977)
chr7 (1-66)||(36609857-36609923)
chr7 (216-266)||(46759430-46759480)
chr7 (221-270)||(581594-581643)
chr7 (16-84)||(9412664-9412733)
chr7 (217-270)||(10040600-10040653)
chr7 (216-272)||(21635041-21635097)
chr7 (216-271)||(19008225-19008280)
chr7 (217-272)||(31176888-31176943)
chr7 (22-84)||(39151797-39151860)
chr7 (216-270)||(1303238-1303292)
chr7 (10-59)||(2275667-2275717)
chr7 (22-64)||(8790810-8790852)
chr7 (1-66)||(21094032-21094098)
chr7 (216-266)||(30240660-30240709)
chr7 (219-269)||(39389721-39389770)
chr7 (217-266)||(4550508-4550557)
chr7 (1-57)||(15647169-15647226)
chr7 (10-66)||(21305489-21305546)
chr7 (16-84)||(25834557-25834626)
chr7 (10-66)||(45000964-45001021)
chr7 (216-265)||(47901927-47901976)
chr7 (221-269)||(581870-581918)
chr7 (11-66)||(4998184-4998240)
chr7 (216-272)||(20149294-20149350)
chr7 (11-66)||(23050862-23050918)
chr7 (216-272)||(48109824-48109880)
chr7 (11-66)||(48624804-48624860)
chr7 (216-263)||(19371922-19371969)
chr7 (10-60)||(25610612-25610663)
chr7 (216-263)||(42963129-42963176)
chr7 (219-265)||(9412893-9412939)
chr7 (7-45)||(15971024-15971062)
chr7 (1-66)||(19491940-19492006)
chr7 (1-66)||(21093634-21093700)
chr7 (35-84)||(25750867-25750917)
chr7 (31-84)||(39434950-39435004)
chr7 (11-64)||(39465822-39465876)
chr7 (16-45)||(7151100-7151129)
chr7 (220-257)||(22479801-22479838)
chr7 (22-66)||(31283498-31283543)
chr7 (22-66)||(48103787-48103832)
chr7 (221-265)||(5757055-5757099)
chr7 (217-269)||(8390551-8390603)
chr7 (224-272)||(39466040-39466088)
chr7 (216-256)||(40356203-40356243)
[»] scaffold0143 (1 HSPs)
scaffold0143 (1-83)||(5759-5840)
[»] scaffold0707 (1 HSPs)
scaffold0707 (219-267)||(196-244)
[»] scaffold0330 (1 HSPs)
scaffold0330 (221-270)||(18683-18732)
[»] scaffold0240 (1 HSPs)
scaffold0240 (221-270)||(2701-2750)
[»] scaffold0268 (3 HSPs)
scaffold0268 (2-115)||(21184-21299)
scaffold0268 (220-266)||(21407-21453)
scaffold0268 (10-66)||(21585-21644)
[»] scaffold0068 (1 HSPs)
scaffold0068 (219-270)||(57439-57490)
[»] scaffold0123 (1 HSPs)
scaffold0123 (216-270)||(30666-30720)
[»] scaffold0649 (1 HSPs)
scaffold0649 (219-272)||(8249-8302)
[»] scaffold0036 (2 HSPs)
scaffold0036 (219-267)||(61544-61592)
scaffold0036 (21-84)||(61349-61412)
[»] scaffold1379 (1 HSPs)
scaffold1379 (217-272)||(1483-1538)
[»] scaffold0229 (1 HSPs)
scaffold0229 (227-261)||(13221-13255)
[»] scaffold0013 (1 HSPs)
scaffold0013 (11-71)||(41561-41623)
[»] scaffold0294 (1 HSPs)
scaffold0294 (218-266)||(1735-1783)
[»] scaffold0024 (1 HSPs)
scaffold0024 (11-66)||(44246-44302)
[»] scaffold0005 (1 HSPs)
scaffold0005 (216-264)||(254695-254743)


Alignment Details
Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 103)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 216 - 393
Target Start/End: Original strand, 3895096 - 3895273
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacatcgctagtcatgtataaagatttaaaagactataaaaatcaagn 315  Q
    ||||||| |||  ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||     
T  3895096 caccgtttatagatttcaaacgttagcgcaataaaaagagcgaaaagacggacacatcgctagtcatgtataaagatttaaaagattgtaaaaatcaagt 3895195  T
Q  316 nnnnnnnagatgtcaaaatttttcaagtnnnnnnnnnnnttgcacttgaaatttaggctttaatacattgttattcta 393  Q
           ||||||||||||||||||| |           |||||||||||||||||||||||||||||||||||||||    
T  3895196 tttttttagatgtcaaaatttttcaattgaaaaaaaaaattgcacttgaaatttaggctttaatacattgttattcta 3895273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 7639430 - 7639544
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||||||||| |||||||||||||| || | || || ||||||       |||||||||    
T  7639430 ttcatcatttcaattatactcttaaacaactttttctataataaaattgttcttggtgtcattaaaaaaggaatttatattatatttttttgttatattg 7639529  T
Q  101 tattattgtcggtgt 115  Q
    ||||||| |||||||    
T  7639530 tattattatcggtgt 7639544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 19266011 - 19265928
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||| |||||||||||||| ||||| |||||||||||| ||||| ||||||||||| |||| || |||||||||    
T  19266011 ttcatcatttcaattatacccttaaacaattttttctataataaaattattgttagtgtcattaaaaaaagaatttagattata 19265928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39850598 - 39850528
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaag 71  Q
    ||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  39850598 ttcatcattccaattatagccttaaacaactttttctataataaaattgttgttggtgtcattaaaaaaag 39850528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3894916 - 3894969
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgtt 54  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3894916 ttcatcatttcaatcatacccttaaacaactttttctataataaaattgttgtt 3894969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13875479 - 13875543
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  13875479 ttcatcatttcaattatacccttaaacaacttttc-tataataaaattgttgttggtgtcattaaa 13875543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 18461397 - 18461332
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||||||| |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  18461397 ttcatcattccaattataccattaaacaactttttctataataaaattgttgttggtgtcattaaa 18461332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 22004428 - 22004542
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    ||||||||| |||| |||||||||| | ||||||| ||||||||||||||||||  |||||||||| |||| || ||||||||        |||||||||    
T  22004428 ttcatcattgcaattatacccttaacccactttttctataataaaattgttgttaatgtcattaaaaaaagaatttagattatttttgtttgttatattg 22004527  T
Q  101 tattattgtcggtgt 115  Q
    |||||||||||||||    
T  22004528 tattattgtcggtgt 22004542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 22011945 - 22012059
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    ||||||||| |||| |||||||||| | ||||||| ||||||||||||||||||  |||||||||| |||| || ||||||||        |||||||||    
T  22011945 ttcatcattgcaattatacccttaacccactttttctataataaaattgttgttaatgtcattaaaaaaagaatttagattatttttgtttgttatattg 22012044  T
Q  101 tattattgtcggtgt 115  Q
    |||||||||||||||    
T  22012045 tattattgtcggtgt 22012059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 35379337 - 35379418
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatta 82  Q
    ||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||||||| ||||| |||| || |||||||    
T  35379337 ttcatcattccaattatatccttaaacaactttttctataataaaattgttgttggtgtcgttaaaaaaagaatttagatta 35379418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 5530582 - 5530664
Alignment:
Q  2 tcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||| | || |||||||||||||||||||| |||||||||||| |||||||||| |||||| |||| || |||||||||    
T  5530582 tcatcattccgattatacccttaaacaactttttctataataaaattattgttggtgttattaaaaaaagaatttagattata 5530664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 5907395 - 5907338
Alignment:
Q  7 atttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5907395 atttcaattatacccttaaacaactttttatataataaagattgttgttggtgtcatt 5907338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 14899882 - 14899939
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14899882 tcaattatacccttaaacaactttttatataataaagattgttgttggtgtcattaaa 14899939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 3418777 - 3418861
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||| ||| |||| |||||||||||||||||||| ||||||||| |||||||||||| |||||||| |||| || |||||||||    
T  3418777 ttcattattccaattatacccttaaacaactttttctataataaagattgttgttggtatcattaaaaaaagaatttagattata 3418861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 30102627 - 30102543
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||| |||| || |||||||||    
T  30102627 ttcattatctcaattatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaaaagaatttagattata 30102543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 41817177 - 41817241
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaac-tttttatataataaaattgttgttggtgtcatta 64  Q
    |||||||||||||| ||||||||||||||| ||||| |||||||||||||||||| |||||||||    
T  41817177 ttcatcatttcaattatacccttaaacaacttttttctataataaaattgttgttcgtgtcatta 41817241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 265159 - 265212
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  265159 accgttcataactttcaaacgttagcgcaataaaaagagcggaaagacgggcac 265212  T

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Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 9350099 - 9350163
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||| || |||| |||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  9350099 ttcatctttccaattatacccttaaacaactttttctata-taaaattgttgttggtgtcattaaa 9350163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 27947732 - 27947811
Alignment:
Q  4 atcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||||| |||||||||||||||||||| |||||||||| |  | |||||||||||||| |||| || |||||||||    
T  27947732 atcatttcaattatacccttaaacaacttttt-tataataaaaatactattggtgtcattaaaaaaagaatttagattata 27947811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36161305 - 36161368
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcatta 64  Q
    ||||| || ||||| |||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  36161305 ttcattatctcaattatacccttaaactactttttttttaataaaattgttgttggtgtcatta 36161368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 7639654 - 7639708
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||| ||||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  7639654 caccattcataattttcaaacgttagcgcaataaaaagagcggaaagacaggcac 7639708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21078640 - 21078706
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||| |||||||||||||||||||| ||||| ||| |||||| ||||||||||||||    
T  21078640 ttcattatttcaattatacccttaaacaactttttctataaaaaatattgtttttggtgtcattaaa 21078706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 42896682 - 42896632
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  42896682 gttcataattttgaaacgttagcgcaataaaaagagcggaaagacgggcac 42896632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 49758291 - 49758237
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||| |||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  49758291 cacccttcaaaattttcaaacgttaacgcaataaaaagagcgaaaagacgggcac 49758237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 50099013 - 50099079
Alignment:
Q  20 ccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaagg-atatagattata 84  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||| ||||| || |||||||||    
T  50099013 ccttaaacaactttttctataataaagattgttgttggtgtcattaaaaaaaggcatttagattata 50099079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 50099206 - 50099256
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||| ||||||||| ||||| ||||||||||||||||||    
T  50099206 caccgttcataatttttaaacgttagtgcaataaaaagagcgaaaagacgg 50099256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 13043186 - 13043141
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||    
T  13043186 gttcataattttcaaacgttagcgcaataaaaagagcggaaagacg 13043141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 220 - 265
Target Start/End: Complemental strand, 13051263 - 13051218
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||    
T  13051263 gttcataattttcaaacgttagcgcaataaaaagagcggaaagacg 13051218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 40360328 - 40360393
Alignment:
Q  20 ccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||| |||| || |||||||||    
T  40360328 ccttaaacaattttttctataataaagattgttgttggtgtcattaaaaaaagaatttagattata 40360393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 45885797 - 45885865
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||||||| |||| || |||||||||    
T  45885797 atacccttaaacaattttttctataataaagattgttgttggtgtcattaaa-aaagaatttagattata 45885865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 17438630 - 17438582
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  17438630 caccgttcataattttcaaacattagcgcaacaaaaagagcgaaaagac 17438582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 21030647 - 21030599
Alignment:
Q  19 cccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  21030647 cccttaaacaactttttctataataaagattgttgttggtgtcattaaa 21030599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 22102415 - 22102471
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  22102415 caattatacccttaaacaactttttccataataaagattgttgttggtgtcattaaa 22102471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 22177363 - 22177419
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  22177363 caattatacccttaaacaactttttccataataaagattgttgttggtgtcattaaa 22177419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 35938811 - 35938867
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  35938811 caattatacccttaaacaactttttatataataaagattgttgttggaatcattaaa 35938867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 45644116 - 45644172
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  45644116 caattatacccttaaacaactttttctataataaagattgtcgttggtgtcattaaa 45644172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 406 - 493
Target Start/End: Original strand, 3895378 - 3895474
Alignment:
Q  406 taatggtgttgttttatactcattatc-------gccacaaaaatagcggatacgtgtgacttat--tcacttcattgttcggtttagaaagaaaat 493  Q
    ||||| |||||||||||||||||||||       |||| | ||||||||||| ||| ||||||||  ||||||||| ||||||||||||||||||||    
T  3895378 taatgttgttgttttatactcattatccccattcgccatataaatagcggatgcgtatgacttatattcacttcatggttcggtttagaaagaaaat 3895474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 255
Target Start/End: Complemental strand, 18461181 - 18461142
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagag 255  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  18461181 caccgttcataattttcaaacgttagcgcaataaaaagag 18461142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 22177561 - 22177608
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  22177561 caccgttcataattttcaaacgttaacgcaataaaaagagcggaaaga 22177608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 26130972 - 26131027
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc-gaaaagacgggcac 270  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||||||| ||||    
T  26130972 caccgttcataattatcaaacgttagcgcaataaaaagagcggaaaagacgagcac 26131027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 18722198 - 18722148
Alignment:
Q  17 tacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  18722198 tacccttaagcaactttttctataataaatattgttgttggtgtcattaaa 18722148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 18874818 - 18874736
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattat 83  Q
    |||||||||  ||| |||| ||||||| ||||||| ||||||||||||||||||  | |||||||| |||| || ||||||||    
T  18874818 ttcatcattctaattatacgcttaaaccactttttctataataaaattgttgttaatatcattaaaaaaagaatttagattat 18874736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 19245528 - 19245574
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  19245528 gttcataatttttaaacgttagcgcaataaaaagagcggaaagacgg 19245574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 22102612 - 22102666
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||||| |||||| ||||||| | ||||| ||||||    
T  22102612 caccgttcataattttcaaacgttaacgcaataaaaagagtggaaagaggggcac 22102666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29542175 - 29542109
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||| |||||| ||||||||||||| ||||||||| |||||||||  ||||||||||    
T  29542175 ttcattatttcaattatacccctaaacaactttttctataataaagattgttgtttatgtcattaaa 29542109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 35379864 - 35379919
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaagga 73  Q
    |||||||||||||||||||| |||||  | ||||||||||||||||||||| ||||||    
T  35379864 atacccttaaacaactttttctataa--agattgttgttggtgtcattaaaaaaagga 35379919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 50483687 - 50483633
Alignment:
Q  7 atttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtc 60  Q
    |||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||    
T  50483687 atttcaattatacccttaaacaacattttatataataaagattattgttggtgtc 50483633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 5811995 - 5811942
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    ||||||| |||||||||||| ||||||| ||| ||||||||| |||||||||||    
T  5811995 caccgttaataattttcaaatgttagcgaaataaaaagagcggaaagacgggca 5811942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 14418974 - 14419031
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  14418974 tcaattatacccttaaacaattttttctataataaagattgttgttgatgtcattaaa 14419031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 19420222 - 19420173
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  19420222 caattatacccttaaacaactttttctataataaagattgttgttggtgt 19420173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 54768140 - 54768185
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||    
T  54768140 cgttcataattttcaaacgttaatgcaataaaaagagcgaaaagac 54768185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 265
Target Start/End: Complemental strand, 285714 - 285666
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    |||||||||||||||||||||||| |||||| |||| || |||||||||    
T  285714 accgttcataattttcaaacgttaacgcaataaaaatagtgaaaagacg 285666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 13476139 - 13476028
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata-nnnnnnngttatatt 99  Q
    ||||||||| |||| |||||||||||||| ||| | ||||||||||||   |||||||||||| || ||| ||| |||||||||        ||||||||    
T  13476139 ttcatcattccaattatacccttaaacaattttatctataataaaatt---gttggtgtcatttaa-aaaagatttagattatattttttttgttatatt 13476044  T
Q  100 gtattattgtcggtgt 115  Q
    ||||||||||||||||    
T  13476043 gtattattgtcggtgt 13476028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 17476359 - 17476415
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  17476359 caattatacgcttaaacaactttttatataataaagattgttgttgatgtgattaaa 17476415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 21824509 - 21824425
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| ||  |||||||||| |||||| |||| |  |||||||||    
T  21824509 ttcattatctcaattatacccttaaacaactttttctataataaagatcattgttggtgttattaaaaaaagaacttagattata 21824425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Original strand, 27398182 - 27398230
Alignment:
Q  18 acccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||||||| ||||| |||||||| |||||| ||||||||||||||    
T  27398182 acccttaaacaaatttttctataataacattgttattggtgtcattaaa 27398230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 39903996 - 39903915
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||| || ||||| |||||||||||||||| ||| |||||||||    ||||||||||||||||| |||| || |||||||||    
T  39903996 ttcattatctcaattatacccttaaacaactctttctataataaa--gattgttggtgtcattaaaaaaagaatgtagattata 39903915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 41817387 - 41817427
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    ||||||||| |||||||||||||||||||||| ||||||||    
T  41817387 caccgttcaaaattttcaaacgttagcgcaataaaaagagc 41817427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 51006156 - 51006240
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||| || ||||| |||| |||||| || ||||| ||||||||| ||||||||||||||| ||||| |||| || |||||||||    
T  51006156 ttcattatctcaattatactcttaaataattttttctataataaagattgttgttggtgtcgttaaaaaaagaatttagattata 51006240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3890283 - 3890220
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    ||||| || ||||| |||||||||||||||||||| || |||||| |||||||||||| |||||    
T  3890283 ttcattatctcaattatacccttaaacaactttttctacaataaagattgttgttggtttcatt 3890220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 256
Target Start/End: Complemental strand, 5492874 - 5492835
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    |||||||||||||||||||| |||||||||| ||||||||    
T  5492874 accgttcataattttcaaactttagcgcaataaaaagagc 5492835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 9350321 - 9350360
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagag 255  Q
    |||| ||||||||||||||||||||||||||| |||||||    
T  9350321 caccattcataattttcaaacgttagcgcaataaaaagag 9350360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 9862262 - 9862309
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    |||||||||||||||||||||||||||| ||| ||||||  |||||||    
T  9862262 caccgttcataattttcaaacgttagcgtaataaaaagatagaaaaga 9862309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 19225119 - 19225158
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagag 255  Q
    ||||||||||||||||||||||||| |||||| |||||||    
T  19225119 caccgttcataattttcaaacgttaacgcaataaaaagag 19225158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 27947952 - 27948003
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||| |||||||||||| ||||||||||  ||||||||| ||||||||||||    
T  27947952 cgtttataattttcaaatgttagcgcaacaaaaagagcggaaagacgggcac 27948003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 30805957 - 30805910
Alignment:
Q  19 cccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||||||||| ||||| ||||||||||||| |||||| |||||||||    
T  30805957 cccttaaacaattttttctataataaaattgatgttggcgtcattaaa 30805910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 52957671 - 52957624
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggt 57  Q
    |||| |||||||||||||||||||||||||||||| |||| |||||||    
T  52957671 caattatacccttaaacaactttttatataataaatattgatgttggt 52957624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 796443 - 796497
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatta 64  Q
    |||| ||||| ||||| |||||||||||||||||| ||||||||| |||||||||    
T  796443 caattatacctttaaataactttttatataataaagattgttgtttgtgtcatta 796497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 5812167 - 5812121
Alignment:
Q  21 cttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||||| ||||||||| || ||||||||||||||||||    
T  5812167 cttaaacaactttttctataataaagatcgttgttggtgtcattaaa 5812121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 5907194 - 5907140
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||| |||||||||| ||||||||||| ||| ||||||||| ||||| ||||||    
T  5907194 caccgctcataattttgaaacgttagcgtaataaaaagagcggaaagatgggcac 5907140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17586963 - 17586897
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||| | ||||| | |||||||||||  ||||||||| |||||||||||||||||||||    
T  17586963 ttcattatttcagttataccttcaaacaacttttcttataataaagattgttgttggtgtcattaaa 17586897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 21495568 - 21495614
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaacaaa 70  Q
    ||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  21495568 aacaactttttctataataaagattgttgttggtgtcagtaaacaaa 21495614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 21790367 - 21790321
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaag 262  Q
    ||||| |||||||||||||||||||| ||||| ||||||||| ||||    
T  21790367 caccgctcataattttcaaacgttagtgcaataaaaagagcggaaag 21790321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 22152459 - 22152509
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||| | |||| ||||||||| ||| ||||||||    
T  22152459 gttcataattttcaaacgttaccacaataaaaagagcggaaaaacgggcac 22152509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 22258484 - 22258430
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||| |||||||||| ||||||| | ||| ||||||| ||||||||||||||    
T  22258484 caccgttaataattttcatacgttagtgaaataaaaagagagaaaagacgggcac 22258430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 24488029 - 24488071
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||||||||||| ||| |||||||||||||||||    
T  24488029 aacaactttttatataataaagattcttgttggtgtcattaaa 24488071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 25478996 - 25478954
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||    
T  25478996 ataattttcaaacgtcagcgcaataaaaagagcggaaagacgg 25478954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 35379563 - 35379609
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||  |||||||||||||||||| ||||||||| ||||||||    
T  35379563 gttcataaccttcaaacgttagcgcaataaaaagagcggaaagacgg 35379609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 42391970 - 42391904
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||| ||||||||||||| ||||||||| |||||||  ||||||||||||    
T  42391970 ttcattatctcaattatacccgtaaacaactttttctataataaagattgttgcaggtgtcattaaa 42391904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49429758 - 49429695
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||||||||| |||||||||    |||||||||||||||||    
T  49429758 ttcattatctcaattatacccttaaacaactttttctataataaa--gattgttggtgtcattaaa 49429695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 3266965 - 3266916
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||| ||||    
T  3266965 caattatacccttaaacaactttttctataataaagattgttgttagtgt 3266916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 5492561 - 5492508
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    |||| ||||| |||||||||||||| ||||||||| |||||||||| |||||||    
T  5492561 caattatacctttaaacaactttttctataataaagattgttgttgatgtcatt 5492508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 7791332 - 7791287
Alignment:
Q  22 ttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||||    
T  7791332 ttaaacaattttttctataataaatattgttgttggtgtcattaaa 7791287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 268
Target Start/End: Original strand, 10438466 - 10438515
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggc 268  Q
    ||||||||||||| |||| |||| ||||| ||||||||| ||||||||||    
T  10438466 cgttcataatttttaaactttagtgcaataaaaagagcggaaagacgggc 10438515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 18388655 - 18388610
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    |||| |||||||||||||||||| ||||| ||||||||| ||||||    
T  18388655 cgtttataattttcaaacgttagggcaataaaaagagcggaaagac 18388610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 21091849 - 21091804
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||||||| ||||| ||||||| | ||||||||    
T  21091849 ttcataattttcaaacgttagtgcaataaaaagagaggaaagacgg 21091804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 25842533 - 25842586
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||| |||||| | ||| ||||||| | ||||||||||||    
T  25842533 accgttcataattttcaaccgttagtgtaataaaaagagtggaaagacgggcac 25842586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 27042320 - 27042377
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||| |||||||||||| |||| ||||||||| |||||||||  ||||||||||    
T  27042320 tcaatcattcccttaaacaacgttttctataataaagattgttgttaatgtcattaaa 27042377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 38809414 - 38809361
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    |||| ||||||||||||||||||||  |||||||| ||||||||| ||||||||    
T  38809414 caattatacccttaaacaactttttcaataataaagattgttgtttgtgtcatt 38809361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 45879791 - 45879836
Alignment:
Q  22 ttaaacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    |||||||||||||| |||||| ||||||||| ||||||||||||||    
T  45879791 ttaaacaactttttctataataaaaattgttattggtgtcattaaa 45879836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 46931786 - 46931749
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaag 253  Q
    |||||||||||||||||||||||||||| ||| |||||    
T  46931786 caccgttcataattttcaaacgttagcgtaataaaaag 46931749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 51833882 - 51833829
Alignment:
Q  31 tttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||| ||||| |||||||||||||||||| ||||| |||| || |||||||||    
T  51833882 tttttctataaaaaaattgttgttggtgtcgttaaaaaaagaatttagattata 51833829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 796651 - 796695
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    |||||| ||||||| |||||||||||||| ||||||||| |||||    
T  796651 cgttcaaaattttcgaacgttagcgcaataaaaagagcggaaaga 796695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 1149420 - 1149360
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||||||||||||||| |||||||||||| || | ||| |||| || |||||||||    
T  1149420 aacaactttttatataataaagattgttgttggtctcttaaaaaaaagaatttagattata 1149360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 4615412 - 4615357
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||||| ||||||||||||||||||  || ||||| || ||||||||||||||||    
T  4615412 caccgttcgtaattttcaaacgttagcataa-taaaaaagtgaaaagacgggcacat 4615357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 12141379 - 12141419
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcg 257  Q
    |||||||||||||| |||||||||||||||| ||| |||||    
T  12141379 accgttcataatttgcaaacgttagcgcaataaaatgagcg 12141419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 18540431 - 18540391
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    |||||||||||||||| ||| ||||||||||| ||||||||    
T  18540431 caccgttcataatttttaaatgttagcgcaataaaaagagc 18540391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 21495759 - 21495803
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    ||||||||||||||| |||||| |||| ||||||| |||||||||    
T  21495759 ttcataattttcaaatgttagcacaataaaaagagtgaaaagacg 21495803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 37431513 - 37431557
Alignment:
Q  23 taaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||    
T  37431513 taaacaactttttctataataaagattgatgttggtgtcattaaa 37431557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 38358648 - 38358701
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||| ||||| |||||||||||||| |||||  | |||||||||||||||||||||    
T  38358648 caattataccattaaacaactttttctataa--agattgttgttggtgtcattaaa 38358701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 39822676 - 39822632
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||    
T  39822676 atacccttaaacaattttttttataataaagattgttgttggtgt 39822632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 39903799 - 39903759
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcg 257  Q
    |||||| |||||||||||||||||| ||||| |||||||||    
T  39903799 accgtttataattttcaaacgttagtgcaataaaaagagcg 39903759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 45879993 - 45880033
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    |||||||||||||||||||| ||||||||||| ||| ||||    
T  45879993 caccgttcataattttcaaatgttagcgcaataaaacgagc 45880033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 216 - 393
Target Start/End: Complemental strand, 42057209 - 42057034
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacatcgctagtcatgtataaagatttaaaagactataaaaatcaagn 315  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||   |||||||||||||||||||||||||||| | |||||||||||     
T  42057209 caccgttcataattttcaaacgttagcgcaataaaaagagcgaaaagacgggca---cgctagtcatgtataaagatttaaaagattgtaaaaatcaagt 42057113  T
Q  316 nnnnnnnagatgtcaaaatttttcaagt-nnnnnnnnnnnttgcacttgaaatttaggctttaatacattgttattcta 393  Q
           |||||||||||| ||||||||            |||||||||||||||||||||||||||||||||||||||    
T  42057112 tttttttagatgtcaaaatgtttcaagtgaaaaaaaaaaattgcacttgaaatttaggctttaatacattgttattcta 42057034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 42057427 - 42057313
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    ||||||||| |||| |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||| ||||||       |||||||||    
T  42057427 ttcatcattccaattatacccttaaacaactttttctataatgaaattattgttggtgtcattaaacaaaggatatatattatatttttttgttatattg 42057328  T
Q  101 tattattgtcggtgt 115  Q
    ||||||||| |||||    
T  42057327 tattattgttggtgt 42057313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33134849 - 33134766
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||| |||| |||| ||  ||||||||    
T  33134849 ttcatcatttcaattatatccttaaacaactttttctataataaaattgttgttggtgtcaataaaaaaagaattaagattata 33134766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21839578 - 21839643
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||||||| |||  |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21839578 ttcatcattccaaatatacccttaaacaactttttctataataaaattgttgttggtgtcattaaa 21839643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 6941525 - 6941608
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||  ||| |||||||||||||||||||| ||||||||||||||||||| |||||||| | |||| || |||||||||    
T  6941525 ttcatcattctaattatacccttaaacaactttttctataataaaattgttgttgatgtcattagaaaaagaatttagattata 6941608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33312947 - 33313030
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||| ||||| ||||| ||||| || ||||||||||||||||||| |||||||||| |||| || |||||||||    
T  33312947 ttcatcatttcaataatacctttaaaaaacttattctataataaaattgttgttgatgtcattaaaaaaagaatttagattata 33313030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 406 - 469
Target Start/End: Complemental strand, 42056929 - 42056866
Alignment:
Q  406 taatggtgttgttttatactcattatcgccacaaaaatagcggatacgtgtgacttattcactt 469  Q
    ||||| ||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  42056929 taatgttgttgttttatactcattatcgcaataaaaatagcggatacgtatgacttattcactt 42056866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13450131 - 13450196
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||| ||||||||||    
T  13450131 ttcatcattccaattatatccttaaacaactttttctataataaaattgttgttgctgtcattaaa 13450196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40633527 - 40633462
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||||| |||||    
T  40633527 ttcatcattccaattatacacttaaacaactttttctataataaaattgttgttggtgtcgttaaa 40633462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 9192042 - 9191988
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||    
T  9192042 caccgttcataattttcaaacgttagcgcaataaaatgagccaaaagacgggcac 9191988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 12069444 - 12069513
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||| || |||||||||    
T  12069444 atactcttaaacaactttttctataataaagattgttgttggtgtcattaaaaaaagaatttagattata 12069513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8062902 - 8062822
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    ||||| ||| |||| ||||| |||||||||||||| ||||||||| ||||||| |||||||||||| |||| || ||||||    
T  8062902 ttcattattccaattataccattaaacaactttttctataataaagttgttgtcggtgtcattaaaaaaagaatttagatt 8062822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 30977085 - 30977001
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||  |||| |||| || || ||||||||||||||||||| ||||||||||||||||||||| |||| || |||||||||    
T  30977085 ttcatcatcccaattatacgctcaatcaactttttatataataaagattgttgttggtgtcattaaaaaaagaatttagattata 30977001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 41122666 - 41122722
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||    
T  41122666 caatcatacccttaaacaacattttttataataaagattgttgttggtgtcattaaa 41122722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 41014472 - 41014519
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  41014472 caccgttcataattttcaaacgttagcgcaataaaaagagcggaaaga 41014519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3357771 - 3357708
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||| || |||| |||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  3357771 ttcatcgttccaattatacccttaaacaactttttctataat--aattgttgttggtgtcattaaa 3357708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 15265766 - 15265820
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  15265766 caccgctcataattttcaaacgttagcgtaataaaaagagcggaaagacgggcac 15265820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32114635 - 32114565
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaag 71  Q
    ||||||||| |||| ||| |||||||||||||||| |||||||||||  ||||||||||||| ||| ||||    
T  32114635 ttcatcattccaattatatccttaaacaactttttctataataaaatgattgttggtgtcatcaaaaaaag 32114565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 41633373 - 41633427
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||    
T  41633373 caccgttcataattttcaaacgttagcgcaataaaaagtgcggaaagacgagcac 41633427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 13450352 - 13450401
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||||||||    
T  13450352 ttcataattttcaaacattagcgcaataaaaagagcggaaagacgggcac 13450401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 44019917 - 44019864
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  44019917 accgttaataattttcaaacgttggcgcaataaaaagagcggaaagacgggcac 44019864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 10553173 - 10553229
Alignment:
Q  11 caatcatacccttaaacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    |||| ||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  10553173 caattatacccttaaacaacgttttctataataaaaattgttgttggtgtcattaaa 10553229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 33676803 - 33676747
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  33676803 caattatacccttaaacaattttttctataataaagattgttgttggtgtcattaaa 33676747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 42651837 - 42651901
Alignment:
Q  2 tcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaa 65  Q
    |||| ||| |||| |||||||||||||||||||| ||| ||||| ||||||||||||||||||||    
T  42651837 tcattattccaattatacccttaaacaactttttttattataaagattgttgttggtgtcattaa 42651901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 7537331 - 7537257
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| ||| ||||||| |||||||||||||||||| |||||||||||||||| |||| |||| ||  ||||||||    
T  7537331 caattataaccttaaaaaactttttatataataaagattgttgttggtgtcactaaaaaaagtatccagattata 7537257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 8875331 - 8875285
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  8875331 ataattttcaaatgttagcgcaataaaaagagcggaaagacgggcac 8875285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 15265565 - 15265615
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtc 60  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||    
T  15265565 caattatacccttaaacaactttttatataataaagattattgttggtgtc 15265615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 42949736 - 42949782
Alignment:
Q  20 ccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||    
T  42949736 ccttaaacaattttttctataataagattgttgttggtgtcattaaa 42949782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 13594127 - 13594086
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    |||||||||||||||||||||||| ||||||||| |||||||    
T  13594127 ataattttcaaacgttagcgcaataaaaagagcggaaagacg 13594086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 21839803 - 21839840
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcg 257  Q
    |||||||||||||||||||||||||||| |||||||||    
T  21839803 gttcataattttcaaacgttagcgcaataaaaagagcg 21839840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 21885203 - 21885154
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  21885203 ttcataattttcaaacgttagagcaataaaaagagcagaaagacgggcac 21885154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 27359905 - 27359860
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaa 261  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||    
T  27359905 caccgttaataattttcaaatgttagcgcaataaaaagagcgaaaa 27359860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 34753399 - 34753452
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||| |||||| ||| ||||||||  ||||||||||||    
T  34753399 accgttcataattttcaaacattagcgtaataaaaagagcagaaagacgggcac 34753452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 19813965 - 19813909
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||| ||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  19813965 caattatacacttaaacaattttttctataataaagattgttgttggtgtcattaaa 19813909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 35126019 - 35125963
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||| |||||||||||||||  |||||||| |||||||||||||||||||||    
T  35126019 caattatactcttaaacaactttttcaataataaagattgttgttggtgtcattaaa 35125963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 272
Target Start/End: Original strand, 14371597 - 14371640
Alignment:
Q  229 tttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||    
T  14371597 tttcaaacgttagcgcaataaaaagagtgaaaagacgagcacat 14371640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Original strand, 17373853 - 17373896
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||||||||||| ||||| |||| |||||||||||    
T  17373853 ttcataattttcaaacgttagtgcaataaaaatagcgaaaagac 17373896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18072358 - 18072427
Alignment:
Q  1 ttcatcatttcaatcatacccttaa---acaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||||||||||   |||||||||| ||||||||| |||||||||||||||||||||    
T  18072358 ttcattatctcaattatacccttaagcaacaactttttctataataaagattgttgttggtgtcattaaa 18072427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 261
Target Start/End: Complemental strand, 20579322 - 20579287
Alignment:
Q  226 aattttcaaacgttagcgcaattaaaagagcgaaaa 261  Q
    |||||||||||||||||||||| |||||||||||||    
T  20579322 aattttcaaacgttagcgcaataaaaagagcgaaaa 20579287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 24100671 - 24100722
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||||  |||| ||||||||| |||||||||||||||||||||    
T  24100671 atacccttaaacaatattttctataataaagattgttgttggtgtcattaaa 24100722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 34063422 - 34063469
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    |||||| ||||||||| ||||||||||| ||| |||||||||||||||    
T  34063422 caccgtacataattttgaaacgttagcgtaataaaaagagcgaaaaga 34063469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 44020104 - 44020061
Alignment:
Q  23 taaacaactttttatataataaa-attgttgttggtgtcattaa 65  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||    
T  44020104 taaacaactttttctataataaagattgttgttggtgtcattaa 44020061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 963323 - 963281
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  963323 aacaactttttttataataaagattgttgttggtgtcattaaa 963281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 7536898 - 7536825
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| ||| ||||||| |||||||||||||||||| ||||| |||||||||| |||| |||| || |||||||||    
T  7536898 caattataaccttaaaaaactttttatataataaagattgt-gttggtgtcactaaaaaaagtatctagattata 7536825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9243763 - 9243697
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||  ||||| |||||||||||||||||||| ||| ||||| |||||||||  ||||||||||    
T  9243763 ttcatcacctcaattatacccttaaacaactttttctatcataaagattgttgttattgtcattaaa 9243697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 19063875 - 19063917
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  19063875 aacaactttttctataataaagattgttgttggtgtcattaaa 19063917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 31593565 - 31593519
Alignment:
Q  21 cttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||||||||||||||| |||||||| ||| ||||||||    
T  31593565 cttaaacaactttttatataataaagattgttgtcggtatcattaaa 31593519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 38702299 - 38702257
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  38702299 aacaactttttctataataaagattgttgttggtgtcattaaa 38702257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 41384576 - 41384502
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| ||| |||||||||||||||| ||||||||| ||| ||| |||| |||||||| |||| || |||||||||    
T  41384576 caattatatccttaaacaactttttctataataaagatttttgatggtatcattaaaaaaagaatttagattata 41384502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 42060279 - 42060229
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||| |||||||| ||||||||||||||| |||||| || ||||||||    
T  42060279 caccgttaataattttgaaacgttagcgcaataaaaagatcggaaagacgg 42060229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43709617 - 43709551
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||| ||||||||||||||| | ||||||| |||||||||||| ||||||||    
T  43709617 ttcattatctcaattatactcttaaacaactttttctttaataaagattgttgttggtttcattaaa 43709551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 9169947 - 9169992
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||| ||||||||||||||| ||||||| | ||||||    
T  9169947 cgttcataatttttaaacgttagcgcaataaaaagagtggaaagac 9169992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 22277780 - 22277727
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    ||||||||| ||||||||| | |||||||||| |||| |||| |||||||||||    
T  22277780 caccgttcaaaattttcaatctttagcgcaataaaaaaagcggaaagacgggca 22277727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 24004454 - 24004405
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||| |||||||||||||| ||||||| ||||||||| |||||| |||||    
T  24004454 ttcacaattttcaaacgttggcgcaataaaaagagcggaaagacaggcac 24004405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 33134404 - 33134359
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||| |||||||||| ||||||| | ||||||||    
T  33134404 ttcataattttcaaacattagcgcaataaaaagagtggaaagacgg 33134359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 36080220 - 36080279
Alignment:
Q  11 caatcatacccttaaacaac---tttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||   ||||| ||||||||| |||||||||||||||||||||    
T  36080220 caattatacccttaaacaacaattttttctataataaagattgttgttggtgtcattaaa 36080279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 45407197 - 45407242
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaa 261  Q
    ||||||| ||||||||||||  |||||||||| |||||||||||||    
T  45407197 caccgttaataattttcaaatattagcgcaataaaaagagcgaaaa 45407242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 3357438 - 3357375
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaa 65  Q
    ||||||||| |||| |||||||||||| || |||| ||| |||||||||||||| ||| ||||||    
T  3357438 ttcatcattccaattatacccttaaactac-ttttctatgataaaattgttgttagtgccattaa 3357375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 7603741 - 7603685
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||| ||||||||||||||| ||||||||| || |||||| |||||||||||    
T  7603741 caattatactcttaaacaactttttctataataaagatcgttgtttgtgtcattaaa 7603685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9192225 - 9192161
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatta 64  Q
    ||||| ||| |||| ||||| ||||||||| | |||||||||||| |||||||||| ||||||||    
T  9192225 ttcattattgcaattatacctttaaacaacgtcttatataataaagattgttgttgatgtcatta 9192161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 12069660 - 12069708
Alignment:
Q  37 tataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||| ||||||||||||||||||||| |||| || |||||||||    
T  12069660 tataataaagattgttgttggtgtcattaaaaaaagaatttagattata 12069708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 12413168 - 12413120
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    |||||||||||||||||||| ||||||||| || ||||||| |||||||    
T  12413168 atacccttaaacaactttttctataataaatatcgttgttgatgtcatt 12413120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 12425228 - 12425180
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    |||||||||||||||||||| ||||||||| || ||||||| |||||||    
T  12425228 atacccttaaacaactttttctataataaatatcgttgttgatgtcatt 12425180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 14706464 - 14706512
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||| || ||||||||||||| ||||||||| |||||||| |||||    
T  14706464 ataatttacacacgttagcgcaataaaaagagcggaaagacggacacat 14706512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 16039352 - 16039396
Alignment:
Q  23 taaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||| || ||||||||| |||||||||||||||||||||    
T  16039352 taaacaacttgttttataataaagattgttgttggtgtcattaaa 16039396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 24004966 - 24004934
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaa 252  Q
    ||||||||||||||||||||| |||||||||||    
T  24004966 gttcataattttcaaacgttaacgcaattaaaa 24004934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 25915095 - 25915055
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    ||||||| |||||||||||||||||||||||| | ||||||    
T  25915095 caccgtttataattttcaaacgttagcgcaataataagagc 25915055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 27913065 - 27913121
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||| ||||||||||||||||||||||||| |||||| || |||| ||||||    
T  27913065 caattatactcttaaacaactttttatataataaagattgttattagtgttattaaa 27913121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 28284272 - 28284328
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||| ||||||| || ||||||||||||||| ||||||||||| |||||||||    
T  28284272 caattataaccttaaataattttttatataataaagattgttgttggggtcattaaa 28284328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 29462882 - 29462938
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||| ||||||||||||||| ||||| ||| |  ||||||||||||||||| |||||    
T  29462882 caccattcataattttcaaatgttagtgcactataaagagcgaaaagacggacacat 29462938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 35916904 - 35916948
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    ||||| |||||||||||||||| |||||| ||||||||| |||||    
T  35916904 cgttcctaattttcaaacgttaacgcaataaaaagagcggaaaga 35916948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 35959993 - 35960037
Alignment:
Q  22 ttaaacaactttttatataat-aaaattgttgttggtgtcattaa 65  Q
    |||||||||||||| |||||| ||||||||||||| |||||||||    
T  35959993 ttaaacaactttttctataataaaaattgttgttgttgtcattaa 35960037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 36817386 - 36817354
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaa 252  Q
    |||||||||||||||||||||||||||| ||||    
T  36817386 gttcataattttcaaacgttagcgcaataaaaa 36817354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 38147818 - 38147874
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||| |||||||||||| |||| |||||| ||| ||||| |||||||| |||||    
T  38147818 caccgttaataattttcaaatgttaacgcaataaaaggagcggaaagacggacacat 38147874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 39271676 - 39271620
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||| ||||||| || ||||| ||||||||| |||||||||||||||||||||    
T  39271676 caattatatccttaaataattttttctataataaagattgttgttggtgtcattaaa 39271620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 6e-29; HSPs: 87)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 43370121 - 43370235
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||| || |||| || |||||||||       |||||||||    
T  43370121 ttcatcattccaattatacccttaaacaactttttctataataaaattgttgttggtgtcatttaaaaaagaatttagattatatttttttgttatattg 43370220  T
Q  101 tattattgtcggtgt 115  Q
    |||||||||||||||    
T  43370221 tattattgtcggtgt 43370235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 6061968 - 6062048
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||||    
T  6061968 ttcatcattccaattatacccttaaacaactttttgtataataaaattgttgttggtgtcattaaaaaaagaatttagatt 6062048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40493849 - 40493929
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||||    
T  40493849 ttcatcatttcaattatactcttaaacaactttttctataataaaattgttgttggtgtcattaaaaaaagtatttagatt 40493929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 32234657 - 32234561
Alignment:
Q  19 cccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattgtattattgtcggtgt 115  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||  |||| || |||||||||       ||||||||||||||||||||||||    
T  32234657 cccttaaacaactttttctataataaaattgttgttggtgtcattaacaaaagaatttagattatatttttttgttatattgtattattgtcggtgt 32234561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 32904545 - 32904462
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||| |||| ||| |||||||||||||||| |||||||||||| ||||||||||||||| | |||| || |||||||||    
T  32904545 ttcatcattccaattatatccttaaacaactttttctataataaaattattgttggtgtcattacaaaaagaatttagattata 32904462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 936320 - 936373
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  936320 accgttcataattttcaaacgttagcgcaataaaaagagcggaaagacgggcac 936373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 19288890 - 19288811
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    ||||||||| |||| |||| ||||||||||||||| |||||||||| ||||||||||||||||||| |||| || ||||||    
T  19288890 ttcatcattccaattatacacttaaacaactttttctataataaaa-tgttgttggtgtcattaaaaaaagaatttagatt 19288811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 834274 - 834200
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||| |||| || |||||||||    
T  834274 caattatacccttaaacaactttttctataataaagattgttgttggtgtcagtaaaaaaagaatctagattata 834200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 35272229 - 35272279
Alignment:
Q  222 tcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  35272229 tcataattttcaaacgttagcgcaataaaaagagcgaaaagatgggcacat 35272279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36226453 - 36226519
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  36226453 ttcattatctcaattatacccttaaacaactttttctataataaagattgttgttggtgtcattaaa 36226519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 1134740 - 1134683
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtg 58  Q
    ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||    
T  1134740 ttcatcattccaattatacccttaaacaactttttccataataaaattgttgttggtg 1134683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 16313452 - 16313497
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  16313452 ttcataattttcaaacgttagcgcaataaaaagagcgaaaagacgg 16313497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 38180188 - 38180123
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || |||| || ||||||    
T  38180188 atacccttaaacaattttttctataataaaattgttgttggtgtcatttaaaaaagaatttagatt 38180123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 38190943 - 38191008
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || |||| || ||||||    
T  38190943 atacccttaaacaattttttctataataaaattgttgttggtgtcatttaaaaaagaatttagatt 38191008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 38207412 - 38207347
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || |||| || ||||||    
T  38207412 atacccttaaacaattttttctataataaaattgttgttggtgtcatttaaaaaagaatttagatt 38207347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 38218168 - 38218233
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || |||| || ||||||    
T  38218168 atacccttaaacaattttttctataataaaattgttgttggtgtcatttaaaaaagaatttagatt 38218233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 42516185 - 42516242
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  42516185 tcaattatacccttaaacaactttttctataataaaaattgttgttggtgtcattaaa 42516242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 13577790 - 13577858
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||| || || ||||||    
T  13577790 atacccttaaacaactttttttatagtaaaattgttgtttgtgtcattaaaaaaagaatttaaattata 13577858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 42506447 - 42506499
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||    
T  42506447 gttcatgattttcaaacgttagcgcaataaaaagagcgaaaagacgagcacat 42506499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 248377 - 248424
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaatt 48  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||    
T  248377 ttcatcatttcaattatacccttaaacaactttttctataataaaatt 248424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 9524091 - 9524141
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||||||||||| ||||||||| |||||| |||||    
T  9524091 gttcataattttcaaacgttagcgcaataaaaagagcggaaagacaggcac 9524141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 14000663 - 14000717
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||||| |||||| ||||||||| ||||||| ||||    
T  14000663 caccgttcataattttcaaacgttaacgcaataaaaagagcggaaagacgagcac 14000717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17210552 - 17210618
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  17210552 ttcattatctcaattatacccttaaacaattttttctataataaagattgttgttggtgtcattaaa 17210618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 17261050 - 17261004
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcat 62  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||    
T  17261050 atacccttaaacaattttttctataataaaattgttgttggtgtcat 17261004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19128683 - 19128617
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||| |||| |||||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  19128683 ttcattattccaattatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaa 19128617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 25754639 - 25754565
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| ||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||| || || ||||||    
T  25754639 caattatacccttaaataactttttctataataaagattgttgttggtgtcattaaaaaaagaatttaaattata 25754565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 33550477 - 33550419
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgt 59  Q
    |||||||||  ||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  33550477 ttcatcattcaaattataccgttaaacaactttttctataataaaattgttgttggtgt 33550419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 38697074 - 38697000
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| ||| |||||||||| ||||| ||||||||| ||||||||||||||||||||| |||| || |||||||||    
T  38697074 caattatatccttaaacaattttttctataataaagattgttgttggtgtcattaaaaaaagaatttagattata 38697000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 39955835 - 39955885
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  39955835 atacccttaaacaattttttttataataaaattgttgctggtgtcattaaa 39955885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 8786783 - 8786726
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  8786783 tcaattatacctttaaacaactttttctataataaagattgttgttggtgtcattaaa 8786726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 19515345 - 19515296
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaaattgttgttggtgt 59  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  19515345 tcaattatacccttaaacaactttttctataataaaattattgttggtgt 19515296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 39850830 - 39850887
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  39850830 tcaattatacccttaaacaaatttttctataataaagattgttgttggtgtcattaaa 39850887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 8943383 - 8943327
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  8943383 caattatacccttaaacaactttttttataacaaagattgttgttggtgtcattaaa 8943327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 12659417 - 12659361
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  12659417 caattatacccttaaacaactttttttataataaagattgttgttagtgtcattaaa 12659361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 17916158 - 17916102
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  17916158 caattatacccttaagtaactttttatataataaagattgttgttggtgtcattaaa 17916102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 28766484 - 28766540
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||    
T  28766484 caccgttcataattttcaaaagttaatgcaataaaaagagcggaaagacgggcacat 28766540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 39956005 - 39956053
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  39956005 caccgttcataattttcaaatgttagcgcaataaaaagagcggaaagac 39956053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 9523876 - 9523923
Alignment:
Q  7 atttcaatcatacccttaaacaactttttatataataaaattgttgtt 54  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  9523876 attttaattatacccttaaacaactttttctataataaaattgttgtt 9523923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 9514779 - 9514817
Alignment:
Q  28 aactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  9514779 aactttttttataataaaattgttgttggtgtcattaaa 9514817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 19929638 - 19929692
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||||| | |||| ||| ||||| ||||||||||||    
T  19929638 caccgttcataattttcaaacgttaacacaataaaatgagcggaaagacgggcac 19929692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 22702279 - 22702333
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    ||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  22702279 tcaattatacccttaaacaactttttctataagaaagattgttgttggtgtcatt 22702333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 23270848 - 23270902
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||| ||||||||||||| ||| |||||| ||||||||| ||||||||||||    
T  23270848 caccgtttataattttcaaactttaacgcaataaaaagagcggaaagacgggcac 23270902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 24836945 - 24836999
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||| ||| ||||||||||| ||||||||| ||||||| ||||    
T  24836945 caccgttcataatttttaaaagttagcgcaataaaaagagcggaaagacgtgcac 24836999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 28867452 - 28867406
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  28867452 ataattttcaaaggttagcgcaataaaaagagcggaaagacgggcac 28867406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28867668 - 28867602
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| || |||| |||||||||||||    
T  28867668 ttcattatctcaattatacccttaaacaactttttctataataaagatcgttgctggtgtcattaaa 28867602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42097474 - 42097540
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| |||| |||||||||| |||||    
T  42097474 ttcattatatcaattatacccttaaacaactttttctataataaagattgatgttggtgtcgttaaa 42097540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42506209 - 42506275
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||||||||||||||||||||  ||||| |||||| |||||||||||||||||    
T  42506209 ttcattatctcaattatacccttaaacaactttttccataataaaaattattgttggtgtcattaaa 42506275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 834070 - 834021
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||| |||||| ||||||||| |||||| |||||    
T  834070 ttcataattttcaaacgttaacgcaataaaaagagcggaaagacaggcac 834021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 7649130 - 7649071
Alignment:
Q  11 caatcatacccttaaacaac---tttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||||||||||   ||||| ||||||||| |||||||||||||||||||||    
T  7649130 caatcatacccttaaacaacaactttttctataataaagattgttgttggtgtcattaaa 7649071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 8231116 - 8231071
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaa 261  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||||    
T  8231116 caccgttcataattttcaaacgttagctcaataaaaagagtgaaaa 8231071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 18526931 - 18526984
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    |||| ||| |||||||||||||||| ||||||||| ||||||||||||||||||    
T  18526931 caattatatccttaaacaactttttctataataaagattgttgttggtgtcatt 18526984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 23206843 - 23206888
Alignment:
Q  22 ttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||    
T  23206843 ttaaacaactttttttataataaagattgttgttggtgtcattaaa 23206888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 31659582 - 31659631
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    ||||||||||| |||||||||||||||||||| |||||| || |||||||    
T  31659582 caccgttcatatttttcaaacgttagcgcaataaaaagaacggaaagacg 31659631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 248789 - 248825
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaa 252  Q
    |||||||||||||||||||||||||||||||| ||||    
T  248789 caccgttcataattttcaaacgttagcgcaataaaaa 248825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 832178 - 832230
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcat 62  Q
    |||| ||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  832178 caattatacctttaaacaactttttctataataaagattgttgttggtgtcat 832230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 9514963 - 9514999
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagag 255  Q
    ||||||||||||||||||||||||||||| |||||||    
T  9514963 cgttcataattttcaaacgttagcgcaataaaaagag 9514999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 19018840 - 19018888
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||| |||| ||||| ||||||||| ||||||||||||||    
T  19018840 ataattttcaaacattagagcaataaaaagagcggaaagacgggcacat 19018888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 19650706 - 19650762
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||| |||||||||||||| ||||||||| ||||||||||||| |||||||    
T  19650706 caattatacctttaaacaactttttctataataaagattgttgttggtgccattaaa 19650762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 19650851 - 19650887
Alignment:
Q  218 ccgttcataattttcaaacgttagcgcaattaaaaga 254  Q
    |||||||||||||||||||||||||||||| ||||||    
T  19650851 ccgttcataattttcaaacgttagcgcaataaaaaga 19650887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 24836761 - 24836817
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||| ||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  24836761 caattatactcttaaacaattttttctataataaatattgttgttggtgtcattaaa 24836817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 28003240 - 28003296
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||| ||||||||||||||||| ||||||| || ||||||||||||||||||    
T  28003240 caattatacgcttaaacaactttttatgtaataaagatcgttgttggtgtcattaaa 28003296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 33168470 - 33168518
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||||||||||||||| |||||| ||||||| | ||||||    
T  33168470 caccgttcataattttcaaacgttaacgcaataaaaagagtggaaagac 33168518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 36337371 - 36337431
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-----attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| |||||||||     |||||||||||||||||||||    
T  36337371 caattatacccttaaacaactttttctataataaataaagattgttgttggtgtcattaaa 36337431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 38455549 - 38455501
Alignment:
Q  16 atacccttaaacaacttttta-tataataaaattgttgttggtgtcatt 63  Q
    |||||||||||||| |||||  |||||||||||||||||||||||||||    
T  38455549 atacccttaaacaatttttttctataataaaattgttgttggtgtcatt 38455501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 25782085 - 25782016
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaac---tttttatataataaaa-ttgttgttggtgtcattaaa 66  Q
    ||||||||  |||| |||||||||||||||   ||||| |||||||||| ||||||||||||||||||||    
T  25782085 ttcatcatcccaattatacccttaaacaacaattttttctataataaaaattgttgttggtgtcattaaa 25782016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 38455347 - 38455300
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| |||||    
T  38455347 caccgttcataattttcaaatgttagtgcaataaaaagagcggaaaga 38455300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 1611880 - 1611834
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||| |||| ||||||||  ||||||||||||    
T  1611880 ataattttcaaacgttagcacaataaaaagagcagaaagacgggcac 1611834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 6062191 - 6062245
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||| ||||||||||| ||| |||| |||| |||||| |||||    
T  6062191 caccgttcataatttttaaacgttagcgtaataaaaaaagcggaaagacaggcac 6062245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 17014231 - 17014281
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacggg 267  Q
    |||||| ||||||||||||| ||||||| || ||||||| |||||||||||    
T  17014231 accgtttataattttcaaacattagcgcgataaaaagagtgaaaagacggg 17014281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 19506714 - 19506660
Alignment:
Q  7 atttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtc 60  Q
    |||||| | |||||||||||||| |||||||| |||||| |||||||||||||||    
T  19506714 atttcagttatacccttaaacaattttttatacaataaagattgttgttggtgtc 19506660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26269392 - 26269458
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||||||| |||||||||||| ||||||||| || ||||||||||||| ||||    
T  26269392 ttcattatctcaattataccctgaaacaactttttctataataaagatagttgttggtgtcaataaa 26269458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 39955932 - 39955974
Alignment:
Q  92 gttatattgtattattgtcggtgtaatagataattatggttag 134  Q
    |||||||||||||||||||| || |||||||||| ||||||||    
T  39955932 gttatattgtattattgtcgttgaaatagataatcatggttag 39955974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 41613045 - 41613095
Alignment:
Q  17 tacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||||| || || |||||| |||||||||||||||||||||    
T  41613045 tacccttaaacaacttcttctacaataaagattgttgttggtgtcattaaa 41613095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 42207841 - 42207883
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  42207841 aacaactttttttataataaagattgttgttggtgtcattaaa 42207883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 258
Target Start/End: Complemental strand, 7937991 - 7937954
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcga 258  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  7937991 ttcataattttcaaacgttatcgcaataaaaagagcga 7937954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 31181010 - 31180965
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    ||||||||||||||||| | |||| ||||||||| |||||||||||    
T  31181010 ataattttcaaacgttaactcaataaaaagagcggaaagacgggca 31180965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 58
Target Start/End: Original strand, 1093809 - 1093857
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtg 58  Q
    |||| |||| |||||||||||||||||||| |||| |||||||||||||    
T  1093809 caattatactcttaaacaactttttatatactaaagattgttgttggtg 1093857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 1611546 - 1611602
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||| ||||||||||||||  ||| |||| |||||||||||||||||||||    
T  1611546 caattatacctttaaacaactttttccatattaaagattgttgttggtgtcattaaa 1611602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 1612060 - 1612004
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||| ||||| ||| ||||| ||||||| |||||||||||||    
T  1612060 caattatacccttaaacaattttttctattataaagattgttgctggtgtcattaaa 1612004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 3295810 - 3295850
Alignment:
Q  225 taattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    |||||||||||||||||| |||| ||||||||| |||||||    
T  3295810 taattttcaaacgttagcacaataaaaagagcggaaagacg 3295850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 8990350 - 8990404
Alignment:
Q  16 atacccttaaacaac---tttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||||   ||||| ||||||||| |||||||||||||||||||||    
T  8990350 atacccttaaacaacagctttttctataataaagattgttgttggtgtcattaaa 8990404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10542994 - 10543058
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatta 64  Q
    ||||| |||||||| ||| |||||||||||||||| || |||||| ||| || ||||||||||||    
T  10542994 ttcattatttcaattatatccttaaacaactttttgtaaaataaagattattattggtgtcatta 10543058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 20176361 - 20176321
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    |||||||||||||||| ||||||||| ||||| ||||||||    
T  20176361 caccgttcataatttttaaacgttagggcaataaaaagagc 20176321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 25793686 - 25793730
Alignment:
Q  22 ttaaacaactttttatataataaa-attgttgttggtgtcattaa 65  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||    
T  25793686 ttaaataactttttctataataaagattgttgttggtgtcattaa 25793730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 28868192 - 28868144
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    |||| |||||||||||||||||| |||||| | ||||||||| ||||||    
T  28868192 cacctttcataattttcaaacgtcagcgcagtaaaaagagcggaaagac 28868144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 35402894 - 35402834
Alignment:
Q  7 atttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||| |||||||||||  ||||| | ||||||||| |||||||| ||||||||||||    
T  35402894 atttcaattatacccttaaaatactttatttataataaagattgttgtcggtgtcattaaa 35402834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 40716224 - 40716280
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||| |||||  |||||||| |||||||||||| ||||||||    
T  40716224 caattatacccttaaacaattttttcaataataaagattgttgttggtttcattaaa 40716280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 4 - 115
Target Start/End: Complemental strand, 37143407 - 37143296
Alignment:
Q  4 atcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattgtat 103  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||| ||       ||||||||||||    
T  37143407 atcattccaattatacccttaaacaactttttctataataaaattgttgttggtgtcattaaaaaaagaatttagattgtatgtttttgttatattgtat 37143308  T
Q  104 tattgtcggtgt 115  Q
    |||| |||||||    
T  37143307 tattatcggtgt 37143296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 50179282 - 50179392
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||  | ||||||||||       |||||||||    
T  50179282 ttcatcattacaattatacccttaaacaactttttctataataaaattgttgatggtgtcattaaaaaaaaaaaatagattatatttttttgttatattg 50179381  T
Q  101 tattattgtcg 111  Q
    |||||||||||    
T  50179382 tattattgtcg 50179392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 27088477 - 27088560
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||| |||| ||||||||||||||  |||| |||||||||||||||||||||||||||||| |||| || |||||||||    
T  27088477 ttcatcattccaattatacccttaaacaatcttttctataataaaattgttgttggtgtcattaaaaaaagaatttagattata 27088560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 47931418 - 47931362
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47931418 caattatacccttaaacaactttttatataataaagattgttgttggtgtcattaaa 47931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 20702512 - 20702593
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagatt 81  Q
    ||||| ||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||||||| |||  |||||||||    
T  20702512 ttcattattccaattatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaaaaatatatagatt 20702593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 20702719 - 20702772
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  20702719 accgttaataattttcaaacgttagcgcaataaaaagagcggaaagacgggcac 20702772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 2358636 - 2358692
Alignment:
Q  11 caatcatacccttaaacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  2358636 caattatacccttaaacaactttttctataataaaaattgttgttggtgtcattaaa 2358692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 5720286 - 5720230
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||    
T  5720286 caccgttcataattttcaaacgttaacgcaataaaaagagtgaaaagacgggaacat 5720230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 6196639 - 6196695
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  6196639 caattatacccttaaacaactttttgtataataaagattgttgttggtgtcattaaa 6196695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 26007773 - 26007866
Alignment:
Q  19 cccttaaacaacttttta-tataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattgtattattgtcg 111  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||| |||  || |||||||||       ||||||||||||||||||||    
T  26007773 cccttaaactacttttttctataataaaattgttgttggtgtcattaaaaaaataatttagattatatttttttgttatattgtattattgtcg 26007866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 17702659 - 17702706
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||    
T  17702659 caccgttcataattttcaaacgttagcgcaataaaaagagcggaaaga 17702706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 4958976 - 4958926
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||| ||||||||||||||| ||||||||||||||||||||| ||||||||    
T  4958976 atactcttaaacaactttttctataataaaattgttgttggtttcattaaa 4958926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35447748 - 35447682
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||||||||||| |||||||| ||||||||| |||||||||||||||||||||    
T  35447748 ttcattatctcaattatacccttaaataactttttctataataaagattgttgttggtgtcattaaa 35447682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20702341 - 20702426
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatt-aaacaaaggatatagattata 84  Q
    ||||| ||| |||| |||||||||||||||||||| ||||||||| || ||||||||||||||| ||| |||| || |||||||||    
T  20702341 ttcattattccaattatacccttaaacaactttttctataataaagatcgttgttggtgtcattgaaaaaaagaatttagattata 20702426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 20964734 - 20964848
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaacttttta-tataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatatt 99  Q
    ||||||||| || | || ||||||||||| |||||  |||| ||||||||||| ||||||||||||| |||| || |||||||||       ||||||||    
T  20964734 ttcatcattacatttattcccttaaacaatttttttctatagtaaaattgttgctggtgtcattaaaaaaagaatttagattata-ttttttgttatatt 20964832  T
Q  100 gtattattgtcggtgt 115  Q
    ||||||||||||||||    
T  20964833 gtattattgtcggtgt 20964848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 21796289 - 21796369
Alignment:
Q  4 atcatttcaatcatacccttaaacaac-tttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||| |||| ||||||||||||||| ||||| |||||||||||| ||||||| ||||||||| |||| || |||||||||    
T  21796289 atcattccaattatacccttaaacaacttttttctataataaaattattgttgg-gtcattaaaaaaagaatttagattata 21796369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 23091187 - 23091131
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||| |||||||||||||||| || |||||| ||||||||| ||||||||||||||    
T  23091187 caccgctcataattttcaaacggtaacgcaataaaaagagcggaaagacgggcacat 23091131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 41169169 - 41169220
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  41169169 atacccttaaacaactttttctataataaagattgttgttggtgtcgttaaa 41169220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 161001 - 161051
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||||||| |||||| ||| ||||||||| ||||||||    
T  161001 caccgttcataattttcaaacattagcgtaataaaaagagcggaaagacgg 161051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 669829 - 669875
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    ||||||||||||||||||||||||| ||||| ||||||||| |||||    
T  669829 accgttcataattttcaaacgttagtgcaataaaaagagcggaaaga 669875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 10727357 - 10727411
Alignment:
Q  17 tacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaag 71  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||||| ||||    
T  10727357 tacccttaaacaactttttataaaataaaattgttgtttaagtcattaaaaaaag 10727411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 10941126 - 10941180
Alignment:
Q  17 tacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaag 71  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||||| ||||    
T  10941126 tacccttaaacaactttttataaaataaaattgttgtttaagtcattaaaaaaag 10941180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 21122266 - 21122320
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    ||||| ||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  21122266 tcaattatacccttaaacaaccttttctataataaatattgttgttggtgtcatt 21122320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 267
Target Start/End: Complemental strand, 37143660 - 37143614
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacggg 267  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||    
T  37143660 ttcataattttcaaacgttagcgcaataaaaaaagcggaaagacggg 37143614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 46251242 - 46251308
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||| ||||| |||||||||||||| ||||||||| |||||| ||||| ||||||||    
T  46251242 ttcattatttcaattataccgttaaacaactttttctataataaagattgttcttggtatcattaaa 46251308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 50561302 - 50561236
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaa-ttgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||| |||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  50561302 ttcattatctcaattatatccttaaacaattttttctataataaaaattgttgttggtgtcattaaa 50561236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 52954096 - 52954142
Alignment:
Q  21 cttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  52954096 cttaaacaactttttctataataaagattgttgttggtgtcattaaa 52954142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 264
Target Start/End: Original strand, 5190629 - 5190674
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||||    
T  5190629 cgttcataattttcaaatgttagcgcaataaaaagagcggaaagac 5190674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 7438124 - 7438071
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||| |||||||||||| ||| |||| |||| ||||||||||||    
T  7438124 accgttcataatttacaaacgttagcgtaataaaaatagcggaaagacgggcac 7438071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 12214635 - 12214590
Alignment:
Q  18 acccttaaacaactttttatataat-aaaattgttgttggtgtcat 62  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||    
T  12214635 acccttaaacaactttttctataataaaaattgttgttggtgtcat 12214590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 44470277 - 44470326
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  44470277 caattatacccttaaacaactttttctataataaagattgttgttggtgt 44470326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 5498717 - 5498773
Alignment:
Q  11 caatcatacccttaaacaacttttta-tataataaaattgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||| |||||  ||||||||||||||||||| ||||||||||    
T  5498717 caattatacccttaaacaatttttttctataataaaattgttgttgctgtcattaaa 5498773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 5499199 - 5499255
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||||||||||||||||||||||| ||||| ||||||| | | ||| ||||||||    
T  5499199 caccgttcataattttcaaacgttagagcaataaaaagagtggagagatgggcacat 5499255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 9779255 - 9779199
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||| ||||||||||||||| || ||||||||| ||||||||    
T  9779255 caattatacccttaaacaattttttatataataaagatggttgttggtttcattaaa 9779199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11064575 - 11064463
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata-nnnnnnngttatatt 99  Q
    ||||||||| |||| ||||||   ||||| ||||| ||||||||| || ||||||||||||||||| |||  || |||||||||        ||||||||    
T  11064575 ttcatcattccaattataccc---aacaattttttctataataaattttttgttggtgtcattaaaaaaataatttagattatattttttttgttatatt 11064479  T
Q  100 gtattattgtcggtgt 115  Q
    ||||||||||||||||    
T  11064478 gtattattgtcggtgt 11064463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 17702435 - 17702387
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||||||||||||||||||| | ||||||||| ||||| ||||||||    
T  17702435 ataattttcaaacgttagcgcagtaaaaagagcggaaagaggggcacat 17702387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 26088916 - 26088971
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||||||||||| |||||| ||| ||||||| | ||||||||||||||    
T  26088916 caccgttcataattttcaaactttagcg-aataaaaagagtggaaagacgggcacat 26088971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 11064357 - 11064306
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacggg 267  Q
    |||| ||||||||||||||| ||||||||||| |||| || |||||||||||    
T  11064357 caccattcataattttcaaatgttagcgcaataaaaaaagtgaaaagacggg 11064306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 35519269 - 35519316
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||||||| | |||| ||||||||| ||||||||    
T  35519269 cgttcataattttcaaacgttaacacaataaaaagagcggaaagacgg 35519316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 37143185 - 37143138
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    ||||||||||||||||||||||||| |||||| ||||||  |||||||    
T  37143185 caccgttcataattttcaaacgttaacgcaataaaaagattgaaaaga 37143138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2133524 - 2133590
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||| ||||||||| ||||| ||||||||| ||||||||||||||| |||||    
T  2133524 ttcattatctcaattatactcttaaacaattttttctataataaagattgttgttggtgtcgttaaa 2133590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 5099554 - 5099508
Alignment:
Q  20 ccttaaacaactttttatataataa-aattgttgttggtgtcattaa 65  Q
    |||||||||||||||| |||||||| ||||||||||||||| |||||    
T  5099554 ccttaaacaactttttctataataataattgttgttggtgtgattaa 5099508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 5662103 - 5662177
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| ||||| ||||| || ||||||||||||||| |||||||||| |||||||||| |||| || |||| ||||    
T  5662103 caattatacctttaaataattttttatataataaagattgttgttgatgtcattaaaaaaagaatttagaatata 5662177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 13204250 - 13204196
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    ||||| |||||||||||||||||||| ||||||||| || ||||||||| |||||    
T  13204250 tcaattatacccttaaacaactttttttataataaagatcgttgttggtttcatt 13204196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26054542 - 26054476
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||| |||| ||||  ||||| |||||||| ||||||||| ||| |||||||||||||||||    
T  26054542 ttcatcattccaattatacttttaaataactttttctataataaagatttttgttggtgtcattaaa 26054476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 35034685 - 35034636
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||||||||| |||||| ||||| |||| ||||||||    
T  35034685 caccgttcataattttcaaacgttcgcgcaa-taaaaaagcggaaagacgg 35034636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 36802665 - 36802619
Alignment:
Q  21 cttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||| | ||||||||| |||||||||||||||||||||    
T  36802665 cttaaacaactttgtctataataaagattgttgttggtgtcattaaa 36802619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 46620711 - 46620651
Alignment:
Q  10 tcaatcatacccttaaa---caactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||||||   ||||||||| ||||||||| |||||||||||||||||||||    
T  46620711 tcaattatacccttaaacaacaactttttctataataaagattgttgttggtgtcattaaa 46620651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 23986160 - 23986111
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||||| |||| |||||| ||  |||||||||||    
T  23986160 ttcataattttcaaacgttagctcaataaaaagatcgggaagacgggcac 23986111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 29097591 - 29097640
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    |||| ||| |||||||||||||||| ||||||||| ||||||||||||||    
T  29097591 caattatagccttaaacaactttttctataataaagattgttgttggtgt 29097640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 32023441 - 32023510
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| ||||||||||||||| ||||||||| ||||||| || |||||||||  |||| || |||||||||    
T  32023441 atactcttaaacaactttttttataataaagattgttgctgatgtcattaacaaaagaatttagattata 32023510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 35447543 - 35447490
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||| |||| ||||| |||| ||||||||| ||||||||| ||||    
T  35447543 cgttcataatttttaaaccttagcacaataaaaagagcggaaagacgggaacat 35447490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 1397178 - 1397234
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||| |||||  |||||||| ||||| |||||||||||||||    
T  1397178 caattatacccttaaacaagtttttcaataataaagattgtcgttggtgtcattaaa 1397234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 10128619 - 10128671
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||| |||||||| |||||||||||||| ||||||||| ||| |||| |||||    
T  10128619 gttcgtaattttcgaacgttagcgcaataaaaagagcggaaatacggacacat 10128671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 15849755 - 15849795
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||||||||| |||| ||||||||| ||||||    
T  15849755 ataattttcaaacgttagcccaataaaaagagcggaaagac 15849795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 21122420 - 21122468
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||||||||||||||  || ||| ||||||||| ||||||    
T  21122420 caccgttcataattttcaaacgttgacgtaataaaaagagcggaaagac 21122468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 23432243 - 23432191
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaaattgttgttggtgtcatt 63  Q
    |||| |||| ||||||||||||||| |||||||||  ||||||||| ||||||    
T  23432243 caattatactcttaaacaactttttctataataaagatgttgttggcgtcatt 23432191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 26427191 - 26427136
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||||||| |||| ||||||||| |||||| ||||||||||||||    
T  26427191 caattatacccttaaacaac-ttttctataataaagattgttattggtgtcattaaa 26427136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 63
Target Start/End: Complemental strand, 29629962 - 29629918
Alignment:
Q  20 ccttaaacaactttttatataat-aaaattgttgttggtgtcatt 63  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||    
T  29629962 ccttaaacaactttttctataataaaaattattgttggtgtcatt 29629918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 34659435 - 34659471
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaa 252  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  34659435 caccgttcataattatcaaacgttagcgcaataaaaa 34659471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 37013173 - 37013133
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    ||||||||||||||||||||| ||||| |||| ||||||||    
T  37013173 caccgttcataattttcaaactttagcacaataaaaagagc 37013133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 50412928 - 50412984
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||||||| |||||||||||||| |||| ||||||| || |||||    
T  50412928 caattatacccttaaacaaccttttatataataaagattgatgttggtttctttaaa 50412984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 51400197 - 51400141
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||| ||||| |||||||| ||||||||| |||||||||||||| ||||||    
T  51400197 caattataccattaaataactttttctataataaagattgttgttggtgttattaaa 51400141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 4e-24; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 1759641 - 1759576
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1759641 ttcatcatttcaattatacccttaaacaactttttctataataaaattgttgttggtgtcattaaa 1759576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 26527380 - 26527319
Alignment:
Q  5 tcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26527380 tcatttcaattatacccttaaacaactttttctataataaaattgttgttggtgtcattaaa 26527319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 13149916 - 13149999
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||||||||||| |||| |||||| |||| || |||||||||    
T  13149916 ttcatcatttcaattataccctcaaacaactttttctataataaaattgttgttcgtgtaattaaaaaaagaatttagattata 13149999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34966685 - 34966769
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||| || |||||||||    
T  34966685 ttcattatctcaattatacccttaaacaactttttctataataaagatttttgttggtgtcattaaaaaaagaatttagattata 34966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36342501 - 36342445
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggt 57  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||    
T  36342501 ttcatcattccaattatacccttaaacaactttttctataataaaattgttgttggt 36342445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 36343026 - 36342946
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    ||||||||| |||| |||||||||||||||||||| | ||||||||||||| ||||||||||| || |||| || ||||||    
T  36343026 ttcatcattccaattatacccttaaacaactttttctctaataaaattgttattggtgtcattgaaaaaagaatttagatt 36342946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 33377964 - 33378046
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||| |||| ||||| |||||||||||||| ||||||||| || ||||||||||||||||| |||| || |||||||||    
T  33377964 ttcatcattccaattatacc-ttaaacaactttttttataataaattttttgttggtgtcattaaaaaaagaatttagattata 33378046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 4430087 - 4430033
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  4430087 caccgttcataattttcaaacgttagcacaataaaaagagcgaaaagacgagcac 4430033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 33480840 - 33480921
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattat 83  Q
    ||||||||| |||| ||| |||||||||||||||| || ||||||||||||||||| ||||||||| |||| || ||||||||    
T  33480840 ttcatcattccaattatatccttaaacaactttttctaaaataaaattgttgttggcgtcattaaa-aaagaatttagattat 33480921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 222 - 272
Target Start/End: Complemental strand, 38804528 - 38804478
Alignment:
Q  222 tcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  38804528 tcataattttcaaacgttagcgcaataaaaagagcggaaagacgggcacat 38804478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 4415154 - 4415090
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||||||| |||| |||||||||||||| ||||| |||||||||||||||||| |||||||||||    
T  4415154 ttcatcattccaattatacccttaaacaaatttttctataataaaattgttgtt-gtgtcattaaa 4415090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13469156 - 13469221
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||| || |||| |||||||||||||||||||| || |||||||||||||||||||| ||||||    
T  13469156 ttcatcgttccaattatacccttaaacaactttttctaaaataaaattgttgttggtgttattaaa 13469221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 15898764 - 15898820
Alignment:
Q  11 caatcatacccttaaacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  15898764 caattatacccttaaacaactttttttataataaaaattgttgttggtgtcattaaa 15898820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 224 - 266
Target Start/End: Original strand, 11938017 - 11938059
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  11938017 ataattttcaaacgttagcgcaataaaaagagcgaaaagacgg 11938059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 18994617 - 18994563
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||    
T  18994617 caccgttcataattttcaaacgtcggcgcaataaaaagagcggaaagacgggcac 18994563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41942568 - 41942502
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  41942568 ttcattatctcaattatacccttaaacaactttttctataataaagattgttgtgggtgtcattaaa 41942502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 5918833 - 5918886
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||| |||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  5918833 accgttaataattttcaaacgttagcgcaataaaaagagcggaaagacgagcac 5918886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 1554768 - 1554824
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||| |||||||| ||||||||| |||||||||||||||||||||    
T  1554768 caattatacccttaaataactttttctataataaagattgttgttggtgtcattaaa 1554824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 11904023 - 11904067
Alignment:
Q  22 ttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||||||||| |||| |||||||||||||||||||||||||    
T  11904023 ttaaacaactttttctatagtaaaattgttgttggtgtcattaaa 11904067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 26784856 - 26784907
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||| |||| ||||| ||||||||| ||||||||||||    
T  26784856 cgttcataattttcaaacattagagcaataaaaagagcggaaagacgggcac 26784907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 38498495 - 38498550
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaa 65  Q
    |||| |||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  38498495 caattatacccttaaacaactttttctacaataaagattgttgttggtgtcattaa 38498550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 1759519 - 1759469
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||| ||||||||||||||||||||||| ||||||||| | ||||||    
T  1759519 caccgttcttaattttcaaacgttagcgcaataaaaagagcggagagacgg 1759469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 11916174 - 11916124
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||| |||||||||||||| || ||| ||||||||||||||||||||||    
T  11916174 gttcatcattttcaaacgttaacgtaataaaaagagcgaaaagacgggcac 11916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 13150141 - 13150191
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||| ||||||||||||||||| |||||| ||||||||| ||||||||    
T  13150141 caccgttaataattttcaaacgttaacgcaataaaaagagcggaaagacgg 13150191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 26784652 - 26784702
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaa 65  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  26784652 atacccttaaacaactttttctataataaagattgttgtcggtgtcattaa 26784702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27020580 - 27020514
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||||||||| || |||||| || ||||||||||||||||||    
T  27020580 ttcattatctcaattatacccttaaacaactttttctacaataaagatcgttgttggtgtcattaaa 27020514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 30264307 - 30264241
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||||| || |||| ||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  30264307 ttcattatttcgattatactcttaaacaactttttatataaaaaagattgttgtcggtgtcattaaa 30264241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 45440655 - 45440705
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtc 60  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||    
T  45440655 caattatacccttaaacaactttttatataataaagattattgttggtgtc 45440705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 444289 - 444338
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||    
T  444289 caattatacccttaaacaactttttatatgataaagattgttgttggtgt 444338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 3739574 - 3739630
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||| |||||||||||||| |||||||||  ||||||||||||||||||||    
T  3739574 caattatacctttaaacaactttttctataataaaggttgttgttggtgtcattaaa 3739630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 4535950 - 4536006
Alignment:
Q  11 caatcatacccttaaacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| ||| || ||||||||||| ||||||||||||    
T  4535950 caattatacccttaaacaactttttctatgataaaaattgttgtcggtgtcattaaa 4536006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 10865232 - 10865176
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| ||||||||| |||||| ||||||| ||||||    
T  10865232 caattatacccttaaacaactttttctataataaagattgttattggtgttattaaa 10865176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 15044160 - 15044121
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  15044160 caccgttcataattttcaaacgttagcgcaa-taaaagagc 15044121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 15916970 - 15916926
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||||    
T  15916970 cgttcataattttcaaacgttagcggaataaaaagagcggaaaga 15916926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 15919624 - 15919568
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||| | ||||||||| | |||||||||||||||||||    
T  15919624 caattatacccttaaacaactttctctataataaagaatgttgttggtgtcattaaa 15919568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 25722799 - 25722847
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcatt 63  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||||    
T  25722799 atacctttaaacaactttttctataataaagattgttgttggtgtcatt 25722847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 18638214 - 18638265
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  18638214 atacccttaaacaattttttctataataaagattgttgttgatgtcattaaa 18638265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 2692116 - 2692062
Alignment:
Q  11 caatcatacccttaaacaact-ttttatataataaa-attgttgttggtgtcatt 63  Q
    |||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  2692116 caattatacccttaaacaacttttttttataataaagattgttgttggtgtcatt 2692062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11937803 - 11937869
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||||||| |||||| || | |||||||||| |||||||||||||||||||||    
T  11937803 ttcattatatcaattataccctcaaacaatttatcatataataaagattgttgttggtgtcattaaa 11937869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 16326632 - 16326674
Alignment:
Q  25 aacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  16326632 aacaactttttatataataaaaattgttcttggtgtcattaaa 16326674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 18279233 - 18279191
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||    
T  18279233 ataattttcaaacgttaacgcaataaaaagagcgaaaacacgg 18279191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 27837753 - 27837799
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||| ||||||||| ||||||||| | ||||||    
T  27837753 gttcataattttcaaacgctagcgcaataaaaagagcggagagacgg 27837799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41666837 - 41666771
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||| |||||||||| ||||| |||||| || |||||||||||||||||||||    
T  41666837 ttcattatctcaattatatccttaaacaattttttctataattaagattgttgttggtgtcattaaa 41666771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 3825395 - 3825448
Alignment:
Q  218 ccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcaca 271  Q
    |||||||||||||| |||||||| |||||| |||||| || ||||| |||||||    
T  3825395 ccgttcataatttttaaacgttaacgcaataaaaagaacggaaagatgggcaca 3825448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7019939 - 7020007
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaact--ttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||| ||||| ||| |||||||||||   |||| ||||||||| |||||||||||||||||||||    
T  7019939 ttcatcatctcaattatatccttaaacaacaacttttttataataaagattgttgttggtgtcattaaa 7020007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 15872140 - 15872091
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    |||| ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  15872140 caattatacctttaaacaactttttctataataaagattgttgttggtgt 15872091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 32856694 - 32856641
Alignment:
Q  7 atttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    ||||| || |||||||||||||||||||| ||||||||| ||||||| ||||||    
T  32856694 atttccattatacccttaaacaactttttctataataaagattgttgatggtgt 32856641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45488956 - 45489024
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaact--ttttatataataaaa-ttgttgttggtgtcattaaa 66  Q
    ||||||||  |||| |||||||||||||||   |||| |||||||||| ||||||||||||||||||||    
T  45488956 ttcatcatcccaattatacccttaaacaacaacttttttataataaaaattgttgttggtgtcattaaa 45489024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 288765 - 288821
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||| |||||| |||||||| ||||||||| |||||||| ||||||||||||    
T  288765 caattatactcttaaaaaactttttctataataaagattgttgtcggtgtcattaaa 288821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 1170500 - 1170556
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||| | |||||| || |||||| |||||||||||||||||||||    
T  1170500 caattatacccttaaatagctttttctacaataaagattgttgttggtgtcattaaa 1170556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 1566230 - 1566286
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||| ||||||| |||||||| ||||||||| ||||||||||| |||||||||    
T  1566230 caattatatccttaaataactttttctataataaagattgttgttggcgtcattaaa 1566286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 5626015 - 5625967
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    |||||| |||||||||||||||| ||| |||| |||| |||||||||||    
T  5626015 ttcatagttttcaaacgttagcgtaataaaaatagcggaaagacgggca 5625967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 12838771 - 12838823
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||||||| ||| |||||| ||||||| | |||||||| |||||    
T  12838771 gttcataattttcaaacattaacgcaataaaaagagaggaaagacggacacat 12838823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 14436539 - 14436503
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaa 252  Q
    ||||||||||||| | |||||||||||||||||||||    
T  14436539 caccgttcataatatgcaaacgttagcgcaattaaaa 14436503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 15898963 - 15899011
Alignment:
Q  218 ccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||| |||||||||||||||||| ||||  ||||||||| ||||||||    
T  15898963 ccgtttataattttcaaacgttagtgcaacaaaaagagcggaaagacgg 15899011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 18279440 - 18279384
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||| |||||||| ||||||||| || ||||||||| ||||||||    
T  18279440 caattatacccttaaataactttttctataataaagatggttgttggtttcattaaa 18279384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 95)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31845092 - 31845157
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31845092 ttcatcatttcaattatacccttaaacaactttttctataataaaattgttgttggtgtcattaaa 31845157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2666148 - 2666231
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| || |||||||||    
T  2666148 ttcatcattccaattatacccttaaacaactttttctataataaaattgttattggtgtcattaaaaaaagaatttagattata 2666231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37706112 - 37706029
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||||||| |||| || |||||||||    
T  37706112 ttcatcatttcaattatacccttgagcaactttttctataataaaattgttgttggtgtcattaaaaaaagaatttagattata 37706029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 1581285 - 1581173
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||||||||||||| ||||||| || |||  || |||||||||       |||||||||    
T  1581285 ttcatcattccaattatacccttaaacaactttttctataataaaattgttgttgatgtcattgaaaaaa--atttagattatatttttttgttatattg 1581188  T
Q  101 tattattgtcggtgt 115  Q
    |||||||||||||||    
T  1581187 tattattgtcggtgt 1581173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 8096242 - 8096292
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8096242 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 8096292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 14746534 - 14746423
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    ||||||||| |||| |||| ||||||||||||||| |||||||||||||||||||||||||||||| |||  || |||||||||       |||||||||    
T  14746534 ttcatcattccaattatactcttaaacaactttttctataataaaattgttgttggtgtcattaaaaaaa--at-tagattatatttttttgttatattg 14746438  T
Q  101 tattattgtcggtgt 115  Q
    ||||| |||||||||    
T  14746437 tattaatgtcggtgt 14746423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16143539 - 16143424
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata-nnnnnnngttatatt 99  Q
    |||||||||  ||| |||||||||||||||||||| || ||||||||||||||||||||||||||| |||| || || ||||||        ||||||||    
T  16143539 ttcatcattctaattatacccttaaacaactttttctaaaataaaattgttgttggtgtcattaaaaaaagaatttaaattatatattttttgttatatt 16143440  T
Q  100 gtattattgtcggtgt 115  Q
    ||||||||||||||||    
T  16143439 gtattattgtcggtgt 16143424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12267050 - 12267116
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  12267050 ttcattatttcaattatacccttaaacaactttttctataataaagattgttgttggtgtcattaaa 12267116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 28041418 - 28041512
Alignment:
Q  21 cttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata-nnnnnnngttatattgtattattgtcggtgt 115  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||||||        ||||||||||||||||||||||||    
T  28041418 cttaaacaactttttctataataaaattgttgttggtgtcattaaa-aaagaatttagattatattatttttgttatattgtattattgtcggtgt 28041512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 1531346 - 1531263
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||  ||| ||||| |||||||| ||||| ||||||||| |||||||||||||||||||| |||| || |||||||||    
T  1531346 ttcatcattctaattatacctttaaacaattttttctataataaagttgttgttggtgtcattaaaaaaagaatttagattata 1531263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 16 - 111
Target Start/End: Complemental strand, 11843057 - 11842962
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattgtattattgtcg 111  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||| |||  |||| || |||||||||       ||||||||||||||||||||    
T  11843057 atacctttaatcaactttttctataataaaattgttgttggtgtcactaagaaaagaatttagattatatttttttgttatattgtattattgtcg 11842962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 217 - 279
Target Start/End: Original strand, 15597531 - 15597593
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacatcgctagt 279  Q
    ||||||||||||||||||| ||||||||| | |||| |||||||||||||||||||| |||||    
T  15597531 accgttcataattttcaaaagttagcgcactaaaaatagcgaaaagacgggcacatcactagt 15597593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 11344934 - 11345007
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattat 83  Q
    |||| |||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||| || ||||||||    
T  11344934 caattatactcttaaacaactttttctataataaagattgttgttggtgtcattaaaaaaagaatttagattat 11345007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 34011090 - 34011037
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  34011090 accgttcataattttcaaacgttagtgcaataaaaagagcggaaagacgggcac 34011037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20906751 - 20906811
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtc 60  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||| |||||||||||||||    
T  20906751 ttcattatttcaattatacccttaaacaactctttatataataaagattgttgttggtgtc 20906811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 266
Target Start/End: Complemental strand, 5880790 - 5880743
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||||||| |||||| ||||||||||||||||||    
T  5880790 cgttcataattttcaaacgttaacgcaataaaaagagcgaaaagacgg 5880743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 115965 - 115899
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||| | |||||||||||||||||||||||| |||||||||||||||||||||    
T  115965 ttcattatctcaattatatcattaaacaactttttatataataaagattgttgttggtgtcattaaa 115899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 10729300 - 10729246
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||    
T  10729300 caccgttcataatttccaaacgttagcgcaataaaaagagcggaaagacgtgcac 10729246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 11842850 - 11842800
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  11842850 caccgttcataattttcaaacgttaacgcaataaaaagagcggaaagacgg 11842800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 50946301 - 50946239
Alignment:
Q  4 atcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    |||||| |||| ||||||| |||||||||||  |||||||||||| |||||||||||||||||    
T  50946301 atcattccaattataccctaaaacaacttttcctataataaaattattgttggtgtcattaaa 50946239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 7297239 - 7297318
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    |||||||||||||| ||||||||||||||| |||| ||| ||||| ||||| |||||||| ||||| |||| || ||||||    
T  7297239 ttcatcatttcaattatacccttaaacaac-ttttctattataaagttgtttttggtgtctttaaaaaaagaatttagatt 7297318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 13303938 - 13303994
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  13303938 caattatacctttaaacaactttttctataataaagattgttgttggtgtcattaaa 13303994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 16424479 - 16424535
Alignment:
Q  11 caatcatacccttaaacaactttttatataataa-aattgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  16424479 caattatacccttaaacaactttttctataataaggattgttgttggtgtcattaaa 16424535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 33326843 - 33326787
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  33326843 caattatactcttaaacaactttttctataataaatattgttgttggtgtcattaaa 33326787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 37705710 - 37705670
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  37705710 caccgttcataattttcaaacgttagcgcaataaaaagagc 37705670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 5965620 - 5965569
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||    
T  5965620 cgttcataattttcaaacgttagagcaataaaaagagcagaaagacgggcac 5965569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 8699277 - 8699332
Alignment:
Q  12 aatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||| ||||||| |||||| ||||||||| |||||||||||||||||||||    
T  8699277 aatcataccattaaacacctttttctataataaagattgttgttggtgtcattaaa 8699332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 13315290 - 13315239
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||||||    
T  13315290 atacccttaaacaactttttctataataaagattgttgttggtatcattaaa 13315239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 15470661 - 15470712
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacggg 267  Q
    |||| |||||| |||||||||||||||||||| ||||||||| |||||||||    
T  15470661 caccattcatagttttcaaacgttagcgcaataaaaagagcggaaagacggg 15470712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 279
Target Start/End: Original strand, 27926631 - 27926694
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacatcgctagt 279  Q
    ||||||||||||| ||||||| |||||  ||| |||||||| ||||||||||||| ||||||||    
T  27926631 caccgttcataatcttcaaacattagcaaaataaaaagagcaaaaagacgggcacgtcgctagt 27926694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33193916 - 33193986
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaag 71  Q
    ||||| || ||||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  33193916 ttcattatctcaattatccccttaaacaacttttt-tataataaagattgttgttggtgtcattaaaaaaag 33193986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12264878 - 12264944
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||||||||  ||||||||| ||||||||| |||||||||||    
T  12264878 ttcattatatcaattatacccttaaacaacttttactataataaagattgttgttagtgtcattaaa 12264944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 23929016 - 23929066
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtc 60  Q
    |||| |||||||||||||||||||||||||||||| ||| |||||||||||    
T  23929016 caattatacccttaaacaactttttatataataaagattattgttggtgtc 23929066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 26342901 - 26342847
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||| |||||| ||| ||||||||||||| | ||||||    
T  26342901 caccgttcataattttcaaactttagcgtaataaaaagagcgaaaaaatgggcac 26342847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31528620 - 31528686
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||||  |||||||||||||| ||||||||| |||||||||||||||||||||    
T  31528620 ttcattatctcaattatacatttaaacaactttttctataataaagattgttgttggtgtcattaaa 31528686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34969428 - 34969362
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||| |||| |||| ||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  34969428 ttcattattccaattatactcttaaacaattttttctataataaagattgttgttggtgtcattaaa 34969362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 43723961 - 43723895
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||||| || |||| ||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  43723961 ttcattatttcgattatactcttaaacaactttttatataaaaaagattgttgtcggtgtcattaaa 43723895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45943276 - 45943342
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||||||||||| |||||| ||||| ||||||||| ||||||||| |||||||||||    
T  45943276 ttcattatctcaatcataccctcaaacaattttttctataataaagattgttgttagtgtcattaaa 45943342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 46880046 - 46880112
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||| ||||| | ||||||| |||||||||||||||||||||    
T  46880046 ttcattatgtcaattatacccttaaacaattttttctgtaataaagattgttgttggtgtcattaaa 46880112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 46880213 - 46880263
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  46880213 caccgttcataattttcaaacgttaatgcaataaaaagagcggaaagacgg 46880263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 52043363 - 52043429
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||||| |||||||||||||| ||||||||| ||| |||||||||||||||||    
T  52043363 ttcattatctcaattatacctttaaacaactttttctataataaagatttttgttggtgtcattaaa 52043429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 650187 - 650142
Alignment:
Q  227 attttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  650187 attttcaaatgttagcgcaataaaaagagcggaaagacgggcacat 650142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 12301022 - 12301067
Alignment:
Q  22 ttaaacaactttttatataataaaa-ttgttgttggtgtcattaaa 66  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  12301022 ttaaacaactttttctataataaaaattgttgttggtgtcattaaa 12301067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 71
Target Start/End: Complemental strand, 28071680 - 28071627
Alignment:
Q  19 cccttaaacaactttttatataata-aaattgttgttggtgtcattaaacaaag 71  Q
    ||||||||||||||||||||||||| | |||||||||||||||| |||| ||||    
T  28071680 cccttaaacaactttttatataatagagattgttgttggtgtcactaaaaaaag 28071627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 47576772 - 47576727
Alignment:
Q  22 ttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||    
T  47576772 ttaaacaactttttctataataaatattgttgttggtgtcattaaa 47576727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 49162683 - 49162732
Alignment:
Q  11 caatcatacccttaaacaactttttatataat-aaaattgttgttggtgt 59  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||    
T  49162683 caattataaccttaaacaactttttatataataaaaattgttgttggtgt 49162732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 50944503 - 50944450
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||||||||||||| ||||| |||| ||||  |||||||||||||    
T  50944503 cgttcataattttcaaacgttagtgcaataaaaaaagcggtaagacgggcacat 50944450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 4968892 - 4968856
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaa 252  Q
    |||||||||||||||||||||||||||||||| ||||    
T  4968892 caccgttcataattttcaaacgttagcgcaataaaaa 4968856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 8574010 - 8574062
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtca 61  Q
    ||||| |||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  8574010 tcaattatactcttaaacaactttttctataataaagattgttgttggtgtca 8574062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 9971887 - 9971927
Alignment:
Q  229 tttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    ||||||||||||||||||| ||||||||||||||| |||||    
T  9971887 tttcaaacgttagcgcaataaaaagagcgaaaagatgggca 9971927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 13315167 - 13315111
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||| |||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  13315167 caattatatccttaaacaactttttctattataaagattgttgttggtgtcattaaa 13315111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 34749026 - 34749070
Alignment:
Q  225 taattttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||    
T  34749026 taattttcaaacgttagcgcaataaaaagagtggaaagacgggca 34749070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 44921795 - 44921755
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcg 257  Q
    |||||||||||||||||||||||| |||||| |||||||||    
T  44921795 accgttcataattttcaaacgttaccgcaataaaaagagcg 44921755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 46273577 - 46273521
Alignment:
Q  7 atttcaatcatacccttaaacaactttttatataat-aaaattgttgttggtgtcat 62  Q
    |||||||| | |||||||||||| ||||| |||||| ||||||||||||||||||||    
T  46273577 atttcaattacacccttaaacaattttttctataataaaaattgttgttggtgtcat 46273521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 48419984 - 48420040
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||| |||||||||||||| ||||||||| || ||||||||||||||||||    
T  48419984 caattataccattaaacaactttttctataataaagatcgttgttggtgtcattaaa 48420040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 49162919 - 49162967
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggc 268  Q
    |||||||||||||||||||||| ||||| ||||||||| ||||| ||||    
T  49162919 gttcataattttcaaacgttagtgcaataaaaagagcggaaagaggggc 49162967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 898925 - 898964
Alignment:
Q  28 aactttttatataataaaa-ttgttgttggtgtcattaaa 66  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  898925 aactttttatataataaaaattgttgttggtgtcattaaa 898964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 21343898 - 21343949
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||||||    
T  21343898 atacccttaaacaatttttactataataaagattgttgttggtgtcattaaa 21343949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 21348763 - 21348814
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||| ||||  ||||||||| |||||||||||||||||||||    
T  21348763 atacccttaaacaatttttactataataaagattgttgttggtgtcattaaa 21348814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 23660390 - 23660339
Alignment:
Q  16 atacccttaaacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    ||||| ||||| |||||||| |||||| ||||||||||||||||||||||||    
T  23660390 atacctttaaataactttttttataattaaaattgttgttggtgtcattaaa 23660339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 33934008 - 33933961
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    |||||||||||||||| ||| ||||||||||| ||||||||| |||||    
T  33934008 caccgttcataatttttaaatgttagcgcaataaaaagagcggaaaga 33933961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Original strand, 40368202 - 40368256
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcaca 271  Q
    |||| |||||||||| |||| |||||||||| |||||||||| |||||||||||||    
T  40368202 cacctttcataatttacaaatgttagcgcaa-taaaagagcggaaagacgggcaca 40368256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 1531121 - 1531071
Alignment:
Q  221 ttcataattttcaaacgttagcgcaat-taaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||||||||||  ||||||| | ||||||||||||    
T  1531121 ttcataattttcaaacgttagcgcaataaaaaagagtggaaagacgggcac 1531071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 1581069 - 1581027
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||    
T  1581069 ataattttcaaactttagcgcaataaaaagagcggaaagacgg 1581027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 8574243 - 8574293
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||| ||||||||||||||||||| |||||  |||||| ||||||||||    
T  8574243 caccgtgcataattttcaaacgttagtgcaatataaagagtgaaaagacgg 8574293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 15476624 - 15476670
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    ||||||||||||||||||||||||||||| ||| || || |||||||    
T  15476624 cgttcataattttcaaacgttagcgcaataaaatgaacggaaagacg 15476670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 20906968 - 20907002
Alignment:
Q  222 tcataattttcaaacgttagcgcaattaaaagagc 256  Q
    |||||||||||||||||||||||||| ||||||||    
T  20906968 tcataattttcaaacgttagcgcaataaaaagagc 20907002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25298038 - 25298104
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||||| |||||||| ||||| ||||||||| || ||||||||||||||||||    
T  25298038 ttcattatctcaattatacctttaaacaaatttttctataataaagatcgttgttggtgtcattaaa 25298104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 27307662 - 27307624
Alignment:
Q  228 ttttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  27307662 ttttcaaacgttagcgcaataaaaagagcggaaagacgg 27307624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 40808816 - 40808774
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  40808816 aacaactttttctataataaagattgttgttggtgtcattaaa 40808774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 43723750 - 43723708
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaa 261  Q
    ||||||||||||||||||||| | ||||| |||||||||||||    
T  43723750 cgttcataattttcaaacgttggtgcaataaaaagagcgaaaa 43723708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 47402511 - 47402461
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||| |||||| ||||||| | |||||| |||||    
T  47402511 gttcataattttcaaacgttaccgcaataaaaagagtggaaagacaggcac 47402461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 50943968 - 50943908
Alignment:
Q  10 tcaatcatacccttaaacaa---ctttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||||||||||||||   |||||| ||||||||| |||||||||||||||||||||    
T  50943968 tcaattatacccttaaacaaaaactttttttataataaagattgttgttggtgtcattaaa 50943908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 7548429 - 7548478
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    |||| |||||||||||||| ||||| ||||||||| ||||||||||||||    
T  7548429 caattatacccttaaacaattttttctataataaagattgttgttggtgt 7548478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 11345133 - 11345182
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    |||||||||||||||| ||||||||  ||||| ||||||||| |||||||    
T  11345133 caccgttcataatttttaaacgttactgcaataaaaagagcggaaagacg 11345182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 262
Target Start/End: Original strand, 12780433 - 12780474
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaag 262  Q
    |||||||||||||||| ||||| |||| ||||||||||||||    
T  12780433 ttcataattttcaaaccttagcacaataaaaagagcgaaaag 12780474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 16424684 - 16424729
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    |||||||||||||||||||||||||||| |||| |||  |||||||    
T  16424684 gttcataattttcaaacgttagcgcaataaaaatagctgaaagacg 16424729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 25822007 - 25821962
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||||||||||||| |||| |  ||||||||||    
T  25822007 ttcataattttcaaacgttagcgcaataaaaaaaatgaaaagacgg 25821962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 35673710 - 35673767
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||||| ||||||||||| || ||||||||| || ||||||||||||||||||    
T  35673710 tcaattatacctttaaacaacttattctataataaatatcgttgttggtgtcattaaa 35673767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 44648438 - 44648479
Alignment:
Q  225 taattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||| |||| ||||||||| ||||||||    
T  44648438 taattttcaaacgttagcacaataaaaagagcggaaagacgg 44648479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Original strand, 44667964 - 44668017
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||| ||||||||| ||||| |||||| || |||||||| |||||    
T  44667964 cgttcataatttttaaacgttagtgcaataaaaagaacggaaagacggacacat 44668017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 46022385 - 46022430
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtc 60  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||    
T  46022385 atacccttaaacaattttttctataataaagattgttgttggtgtc 46022430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 264
Target Start/End: Original strand, 2666375 - 2666419
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||||||||||| |||||| ||||||| | ||||||    
T  2666375 gttcataattttcaaacgttatcgcaataaaaagagtggaaagac 2666419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 4242263 - 4242311
Alignment:
Q  218 ccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||| |||||||||||||||||||  ||| ||||||||| ||||||||    
T  4242263 ccgttaataattttcaaacgttagcataataaaaagagcggaaagacgg 4242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 9822457 - 9822501
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    ||||||||||| ||||||||||||||| ||| ||||| |||||||    
T  9822457 ttcataatttttaaacgttagcgcaataaaatgagcggaaagacg 9822501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 11409177 - 11409225
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    |||| |||||||||||||||| ||| |||||| ||||||||| ||||||    
T  11409177 caccattcataattttcaaactttatcgcaataaaaagagcggaaagac 11409225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 12266925 - 12266969
Alignment:
Q  2 tcatcatttcaatcatacccttaaacaactttttatataataaaa 46  Q
    |||| |||||||| |||||||||||||| ||||| ||||||||||    
T  12266925 tcattatttcaattatacccttaaacaattttttctataataaaa 12266969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 21335086 - 21335042
Alignment:
Q  23 taaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||    
T  21335086 taaacaactttttctataataaagattgtcgttggtgtcattaaa 21335042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 23655273 - 23655233
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcg 257  Q
    |||||| |||||||| |||||||| ||||||||||||||||    
T  23655273 accgtttataatttttaaacgttaacgcaattaaaagagcg 23655233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 24004899 - 24004843
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||| ||||||||||||||| ||||||||||| |||  |||| |||||| |||||||    
T  24004899 caccattcataattttcaaaagttagcgcaataaaataagcggaaagacaggcacat 24004843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 33934251 - 33934207
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa 45  Q
    ||||| || ||||| |||||||||||||||||||| |||||||||    
T  33934251 ttcattatctcaattatacccttaaacaactttttctataataaa 33934207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 40808622 - 40808574
Alignment:
Q  222 tcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||||| ||| |||||| |||||| | ||||||    
T  40808622 tcataattttcaaacgttagcgtaataaaaagaacgaaaaaatgggcac 40808574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 43575720 - 43575664
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||| ||||| ||||||||| ||  |||||||||||||||||    
T  43575720 caattatacccttaaacaaatttttctataataaagatcattgttggtgtcattaaa 43575664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 252
Target Start/End: Complemental strand, 50946052 - 50946020
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaa 252  Q
    |||||||||||||||||||||||||||| ||||    
T  50946052 gttcataattttcaaacgttagcgcaataaaaa 50946020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 52397181 - 52397137
Alignment:
Q  22 ttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||||||| |||| |||||||| |||||||||||| ||||||||    
T  52397181 ttaaacaaccttttctataataagattgttgttggtatcattaaa 52397137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2485891 - 2485974
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||| |||| ||||||||||||||  |||| |||||||||||||||||||||||||||||| |||| || |||||||||    
T  2485891 ttcatcattccaattatacccttaaacaatcttttctataataaaattgttgttggtgtcattaaaaaaagaatttagattata 2485974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2441410 - 2441492
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||  ||| |||||||||||||||||||  ||||||||||||||| |||||||||||||| |||| || |||||||||    
T  2441410 ttcatcattctaattatacccttaaacaacttttc-tataataaaattgtttttggtgtcattaaaaaaagaatttagattata 2441492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16187017 - 16187133
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    ||||||||| |||| |||| ||||||||||||||| |||||||||||||||| | |||| |||||| |||| || || ||||||       |||||||||    
T  16187017 ttcatcattccaattatactcttaaacaactttttctataataaaattgttggttgtgtaattaaaaaaagtatttatattata-ttttttgttatattg 16187115  T
Q  101 tattattgtcggtgtaat 118  Q
    ||||||||||||| ||||    
T  16187116 tattattgtcggtataat 16187133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28712071 - 28712005
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  28712071 ttcattatctcaattatacccttaaacaactttttctataataaagattgttgttggtgtcattaaa 28712005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 11323313 - 11323425
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    |||||||||  ||| ||||  |||||||||||||| ||||||||||||||||||||||||||| || || | || |||||||||        ||||||||    
T  11323313 ttcatcattctaattatacatttaaacaactttttctataataaaattgttgttggtgtcattgaaaaaggaatttagattatatgtttt--ttatattg 11323410  T
Q  101 tattattgtcggtgt 115  Q
    |||||||||||||||    
T  11323411 tattattgtcggtgt 11323425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 28592550 - 28592606
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  28592550 caattatacccttaaacaactttttatataataaatattgttgttggtgtcactaaa 28592606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 33573663 - 33573711
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacggg 267  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  33573663 cgttcataattttcaaacgttagcgcaaaaaaaagagcgaaaagacggg 33573711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10460111 - 10460182
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaag 71  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| || |||||||||||||||||| ||||    
T  10460111 ttcattatctcaattatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaaaag 10460182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1190494 - 1190564
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaag 71  Q
    ||||||||| |||| |||| ||| ||||||||||| ||||||||||||||| ||| |||||||||| ||||    
T  1190494 ttcatcattccaattatacacttgaacaactttttctataataaaattgttcttgatgtcattaaaaaaag 1190564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 31861840 - 31861914
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| |||||||||||||||||||| ||||||||| || ||| |||||||||||||| |||| || |||||||||    
T  31861840 caattatacccttaaacaactttttctataataaagatcgtttttggtgtcattaaaaaaagaatttagattata 31861914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 32531312 - 32531361
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    ||||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  32531312 caccgttaataattttcaaacgttagcgcaataaaaagagcggaaagacg 32531361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 9894295 - 9894247
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacggg 267  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  9894295 cgttcataattttcaaacgttagtgcaataaaaagagtgaaaagacggg 9894247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 14965230 - 14965286
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||| |||||||||||||| ||||||||| || ||||||||||||||||||    
T  14965230 caatcatacctttaaacaactttttctataataaagatggttgttggtgtcattaaa 14965286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 14426643 - 14426694
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  14426643 atactcttaaacaactttttatataataaagattgttgttgatgtcattaaa 14426694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7451800 - 7451734
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||| | ||||| |||||||||||||| ||||||||| ||||||||||| |||||||||    
T  7451800 ttcattatttcagttataccattaaacaactttttctataataaagattgttgttggcgtcattaaa 7451734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 10343481 - 10343415
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||| |||| |||||||||||||||||||| ||||||||| || ||||||||| ||||||||    
T  10343481 ttcattattccaattatacccttaaacaactttttctataataaagatggttgttggtttcattaaa 10343415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 10587658 - 10587700
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  10587658 ttcataattttcaaacgttggcgcaataaaaagagcgaaaaga 10587700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 12169746 - 12169696
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||| ||| |||||| ||||||||| ||||||||||||    
T  12169746 gttcataattttcaaacattaacgcaataaaaagagcggaaagacgggcac 12169696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 17942733 - 17942799
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||  |||| |||||||||||||||||||| ||| ||||| |||||| ||||||||||||||    
T  17942733 ttcatcatcccaattatacccttaaacaactttttctatgataaagattgttattggtgtcattaaa 17942799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 22535132 - 22535086
Alignment:
Q  17 tacccttaaacaactttttatataataaa-attgttgttggtgtcat 62  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||    
T  22535132 tacccttaaacaactttttctataataaatattgttgttggtgtcat 22535086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 24062809 - 24062859
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||| |||||||| ||||||||| ||| ||||||||    
T  24062809 gttcataattttcaaacgtcagcgcaataaaaagagcggaaaaacgggcac 24062859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 6001452 - 6001403
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgt 59  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||||||    
T  6001452 caattatacccttaaacaactttttctataataaagattgttgttggtgt 6001403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 32531125 - 32531174
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcatta 64  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||||||    
T  32531125 ataccattaaacaactttttctataataaagattgttgttggtgtcatta 32531174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 12169969 - 12169909
Alignment:
Q  7 atttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||| ||||||| ||| |||||||| ||||||||| || ||||||||||||||||||    
T  12169969 atttcaattataccctcaaataactttttctataataaagatcgttgttggtgtcattaaa 12169909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 21104758 - 21104810
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||||| |||||||||||||| |||| ||||| |||||||||||| |||||    
T  21104758 gttcataactttcaaacgttagcacaataaaaagtgcgaaaagacggacacat 21104810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 4996777 - 4996722
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcaca 271  Q
    |||||||||||||||||||||||||| ||||| |||||| ||  || |||||||||    
T  4996777 caccgttcataattttcaaacgttagtgcaatgaaaagaacggtaaaacgggcaca 4996722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 10343267 - 10343228
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  10343267 ataattttcaaacattagcgcaataaaaagagcgaaaaga 10343228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 17264146 - 17264197
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||| |||||||||||||||||| | ||| ||||||||| ||||||||||||    
T  17264146 cgttaataattttcaaacgttagtgtaataaaaagagcggaaagacgggcac 17264197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20715818 - 20715885
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaacttttta-tataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||| |||||  ||||||||| |||||||||||||||||||||    
T  20715818 ttcattatctcaattatacccttaaacaatttttttctataataaagattgttgttggtgtcattaaa 20715885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 247
Target Start/End: Complemental strand, 22534933 - 22534902
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaat 247  Q
    ||||||||||||||||||||||||||||||||    
T  22534933 caccgttcataattttcaaacgttagcgcaat 22534902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 22838394 - 22838343
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||||||||| ||||||||| ||||||| || ||||||||||    
T  22838394 atacccttaaacaactttttctataataaagattgttgatgatgtcattaaa 22838343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 26251816 - 26251765
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcaca 271  Q
    |||||||||||||||||||||||||||| |||||| |  |||||||| ||||    
T  26251816 gttcataattttcaaacgttagcgcaataaaaagaacagaaagacggacaca 26251765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 28592858 - 28592909
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacggg 267  Q
    |||| |||||||||||||| | |||||||||| ||||||||| |||||||||    
T  28592858 caccattcataattttcaaccattagcgcaataaaaagagcggaaagacggg 28592909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 1212059 - 1212093
Alignment:
Q  227 attttcaaacgttagcgcaattaaaagagcgaaaa 261  Q
    ||||||||||||||||||||| |||||||||||||    
T  1212059 attttcaaacgttagcgcaataaaaagagcgaaaa 1212093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 14662397 - 14662355
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  14662397 aacaactttttctataataaagattgttgttggtgtcattaaa 14662355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 17353115 - 17353157
Alignment:
Q  25 aacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||| ||||||||| |||||||||||||||||||||    
T  17353115 aacaactttttctataataaagattgttgttggtgtcattaaa 17353157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 19146244 - 19146170
Alignment:
Q  11 caatcatacccttaaacaa-ctttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattat 83  Q
    |||| |||||||||||||| |||||| ||||||||| ||||| |||| |||||||||| |||| || ||||||||    
T  19146244 caattatacccttaaacaacctttttctataataaagattgtcgttgatgtcattaaaaaaagaatttagattat 19146170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 23124400 - 23124446
Alignment:
Q  21 cttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||||||||||||| || |||||| |||||||||||||||||||||    
T  23124400 cttaaacaactttttctaaaataaagattgttgttggtgtcattaaa 23124446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 26253026 - 26252976
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtc 60  Q
    |||| |||||||||||||| ||||||||||||||| ||| |||||||||||    
T  26253026 caattatacccttaaacaaatttttatataataaagattattgttggtgtc 26252976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 1190713 - 1190765
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    ||||||||||||||| ||||||||||| |||| ||||||||| |||||| ||||    
T  1190713 caccgttcataattt-caaacgttagcacaataaaaagagcggaaagacaggca 1190765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 5442479 - 5442438
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaa 260  Q
    |||| ||||||||||||||||||| |||| ||||||||||||    
T  5442479 cgtttataattttcaaacgttagcacaataaaaagagcgaaa 5442438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Complemental strand, 6874993 - 6874952
Alignment:
Q  225 taattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||| ||||||||||||||| ||||||| ||||||||||    
T  6874993 taatttttaaacgttagcgcaataaaaagagagaaaagacgg 6874952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 13240785 - 13240726
Alignment:
Q  11 caatcatacccttaaacaacttt---ttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||||||||||||||||||   |||||||||||| |||||||||| ||||||||||    
T  13240785 caattatacccttaaacaactttttcttatataataaagattgttgttgatgtcattaaa 13240726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 2441635 - 2441683
Alignment:
Q  218 ccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||| |||| |||||| |||| | |||||||||||    
T  2441635 ccgttcataattttcaaatgttaacgcaataaaaaaatcgaaaagacgg 2441683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 3833958 - 3833902
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| ||| ||| |||||| ||||||||||| ||| |||||||||||||||||||||    
T  3833958 caattatatcctaaaacaaatttttatataagaaatattgttgttggtgtcattaaa 3833902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4997061 - 4997017
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa 45  Q
    ||||| || ||||| |||||||||||||||||||| |||||||||    
T  4997061 ttcattatctcaattatacccttaaacaactttttctataataaa 4997017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 8771790 - 8771734
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||| ||||| ||||| ||||||||| ||| |||||||||||||||||    
T  8771790 caattatacccttgaacaattttttctataataaagattattgttggtgtcattaaa 8771734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 17259499 - 17259463
Alignment:
Q  18 acccttaaacaactttttatataataaa-attgttgt 53  Q
    |||||||||||||||||||||||||||| ||||||||    
T  17259499 acccttaaacaactttttatataataaagattgttgt 17259463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 261
Target Start/End: Complemental strand, 32349256 - 32349216
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaa 261  Q
    ||||||||||||||||||||||||||| || |||| |||||    
T  32349256 ttcataattttcaaacgttagcgcaataaagagagagaaaa 32349216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 30240930 - 30240816
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattg 100  Q
    ||||||||| |||| |||||||||||||||||||| |||||||||||| | ||||| ||||||||| |||| || || ||||||       || ||||||    
T  30240930 ttcatcattccaattatacccttaaacaactttttctataataaaattatcgttggcgtcattaaaaaaagaatttatattatatttttttgtcatattg 30240831  T
Q  101 tattattgtcggtgt 115  Q
    |||||||||||||||    
T  30240830 tattattgtcggtgt 30240816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8390326 - 8390391
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||||||| |||| |||||||||||||||||| | ||||||||||||||| ||||||||||||||    
T  8390326 ttcatcattccaattatacccttaaacaactttatctataataaaattgttattggtgtcattaaa 8390391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 8949073 - 8949000
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||| |||||||||||||||||||| |||| ||||||||||||| ||||||||||| |||| || |||||||||    
T  8949073 caattatacccttaaacaactttttttatagtaaaattgttgtttgtgtcattaaaaaaagaatttagattata 8949000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 15647005 - 15646954
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  15647005 cgttcataattttcaaacgttagcgcaataaaaagagcggaaagacgggcac 15646954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 216 - 270
Target Start/End: Original strand, 25617441 - 25617494
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  25617441 caccgttcataattttcaaacgttagcgcaataaaaagagcg-aaagacgggcac 25617494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 39435170 - 39435220
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  39435170 gttcataattttcaaacgttagcgcaataaaaagagcggaaagacgggcac 39435220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12170518 - 12170583
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaa 66  Q
    ||||||||| |||| |||| ||||||||||||||| ||||||||||||||||||||| || |||||    
T  12170518 ttcatcattccaattatactcttaaacaactttttctataataaaattgttgttggtctcgttaaa 12170583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 21766077 - 21766028
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  21766077 caccgttcataattttcaaacgttagcgcaataaaaagagcggaaagacg 21766028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47901756 - 47901836
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagatt 81  Q
    ||||| || ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||| || ||||||    
T  47901756 ttcattatctcaattatacccttaaacaacttttt-tataataaagattgttgttggtgtcattaaaaaaagaatttagatt 47901836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 220 - 272
Target Start/End: Complemental strand, 10199524 - 10199472
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  10199524 gttcataattttcaaactttagcgcaataaaaagagcggaaagacgggcacat 10199472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 19371720 - 19371776
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  19371720 caattatacccttaaacaactttttctataataaagattgttgttggtgtcattaaa 19371776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 266
Target Start/End: Original strand, 1787153 - 1787200
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||    
T  1787153 cgttcataattttcaaacgttaacgcaattaaaagagcggaaagacgg 1787200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 6474852 - 6474785
Alignment:
Q  14 tcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagatt 81  Q
    |||| |||||||| |||||||| |||||||||||||||||| ||||||||||| |||| || ||||||    
T  6474852 tcattcccttaaaaaactttttctataataaaattgttgtttgtgtcattaaaaaaagaatttagatt 6474785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 4550295 - 4550361
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  4550295 ttcattatatcaattatacccttaaacaattttttatataataaagattgttgttgatgtcattaaa 4550361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 5800239 - 5800337
Alignment:
Q  16 atacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatattgtattattgtcggtgt 115  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||| | |||  || |||||||||       ||||||| ||||||||||||||||    
T  5800239 atacccttaaacaactttgtctataataaaaatgttgttggtgtcattata-aaataatttagattatatatttttgttatatcgtattattgtcggtgt 5800337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 5800443 - 5800493
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  5800443 caccgttcataattttcaaacattagcgcaataaaaagagcggaaagacgg 5800493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 10199748 - 10199633
Alignment:
Q  2 tcatcatttcaatcatacccttaaacaactttt-tatataataaaattgttgttggtgtcattaaacaaaggatatagattata-nnnnnnngttatatt 99  Q
    ||||||||  ||| ||||| || |||||||||| | |||| ||||||||||||||||||||||||| |||| || |||||||||        ||||||||    
T  10199748 tcatcattcgaattatacctttgaacaacttttctctatattaaaattgttgttggtgtcattaaaaaaagaatttagattatattttttttgttatatt 10199649  T
Q  100 gtattattgtcggtgt 115  Q
    ||||||||||||||||    
T  10199648 gtattattgtcggtgt 10199633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 27722977 - 27722896
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattat 83  Q
    ||||||||| |||| ||||  ||||||||||||||||||||||||||| |||||| ||| |||||| |||| || ||||||||    
T  27722977 ttcatcattccaattatacttttaaacaactttttatataataaaattattgttgatgttattaaa-aaagaatttagattat 27722896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36609923 - 36609857
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| || ||||| |||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  36609923 ttcattatctcaattatacccttaaacaattttttctataataaagattgttgttggtgtcattaaa 36609857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 46759480 - 46759430
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||| ||||||||||||||||||||| ||||||||| ||||||||    
T  46759480 caccgttcattattttcaaacgttagcgcaataaaaagagcggaaagacgg 46759430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 581643 - 581594
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||||||| |||| |||| ||||||||||||    
T  581643 ttcataattttcaaacgttagcgcaataaaaaaagcggaaagacgggcac 581594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 9412664 - 9412733
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||| ||||| ||||||||| ||||||||| ||||| ||||| |||| ||||||||||||    
T  9412664 atacccttaaacaattttttctataataaagattgttgttagtgtcgttaaaaaaagaatatagattata 9412733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 10040600 - 10040653
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||| ||||||||||| ||||||||  ||||||||||||    
T  10040600 accgttcataattttcaaatgttagcgcaataaaaagagcagaaagacgggcac 10040653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 21635041 - 21635097
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||| |||||| ||||||||||| ||||||||| ||||||| ||||||    
T  21635041 caccgttcataatattcaaatgttagcgcaataaaaagagcggaaagacgagcacat 21635097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 19008280 - 19008225
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcaca 271  Q
    |||||||| ||||||||||||||||||||||| |||| || | |||||||||||||    
T  19008280 caccgttcttaattttcaaacgttagcgcaataaaaatagtggaaagacgggcaca 19008225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 31176888 - 31176943
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||| |||||||||||||||||||| ||| |||||||  |||||||||||||||    
T  31176888 accgttaataattttcaaacgttagcgtaataaaaagagtaaaaagacgggcacat 31176943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 39151797 - 39151860
Alignment:
Q  22 ttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||| |||| || |||||||||    
T  39151797 ttaaacaactttttctataataaagattgttgttggtgttattaaaaaaagaatttagattata 39151860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 1303292 - 1303238
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    |||| |||||||||||||||||| |||||||| ||||||||| ||| ||||||||    
T  1303292 caccattcataattttcaaacgtcagcgcaataaaaagagcggaaaaacgggcac 1303238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 59
Target Start/End: Complemental strand, 2275717 - 2275667
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataat-aaaattgttgttggtgt 59  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||||||    
T  2275717 tcaattatacccttaaacaactttttctataataaaaattgttgttggtgt 2275667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 8790810 - 8790852
Alignment:
Q  22 ttaaacaactttttatataataaaattgttgttggtgtcatta 64  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  8790810 ttaaacaactttttttataataaaattgttgttggtgttatta 8790852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21094098 - 21094032
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||||||||  ||| ||||||||||||||| ||||||||| ||||||||| |||||||||||    
T  21094098 ttcattatttcaattgtactcttaaacaactttttttataataaagattgttgttcgtgtcattaaa 21094032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 266
Target Start/End: Complemental strand, 30240709 - 30240660
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  30240709 caccgttcataattttcaa-cgttagcacaataaaaagagcgaaaagacgg 30240660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 269
Target Start/End: Original strand, 39389721 - 39389770
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  39389721 cgttcataattttcaaacgttagcgcaa-taaaaaaacgaaaagacgggca 39389770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 4550508 - 4550557
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  4550508 accgttcataattttcaaacgttaaggcaataaaaagagcggaaagacgg 4550557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15647226 - 15647169
Alignment:
Q  1 ttcatcatttcaatcatacccttaaa-caactttttatataataaaattgttgttggt 57  Q
    |||||||||||||| ||||| ||||| ||||||||| |||||||||||||| ||||||    
T  15647226 ttcatcatttcaattataccattaaaacaactttttctataataaaattgtcgttggt 15647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 21305546 - 21305489
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||| |||||||    
T  21305546 tcaattatacccttaaataactttttgtataataaagattgttgttggtgccattaaa 21305489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 84
Target Start/End: Original strand, 25834557 - 25834626
Alignment:
Q  16 atacccttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    |||||||||||||| ||||  ||||||||| |||||||||| |||||||||| |||| || |||||||||    
T  25834557 atacccttaaacaatttttcctataataaagattgttgttgatgtcattaaaaaaagaatttagattata 25834626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 45001021 - 45000964
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||||| ||||| ||||    
T  45001021 tcaattatacccttaaacaactttttctataataaagattgttgttgatgtcaataaa 45000964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 47901927 - 47901976
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    |||||||||||||||| ||| ||||||||||| ||||||||| |||||||    
T  47901927 caccgttcataatttttaaatgttagcgcaataaaaagagcggaaagacg 47901976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 581918 - 581870
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    ||||||||||||||||||| ||||||| |||| |||| |||||||||||    
T  581918 ttcataattttcaaacgttggcgcaataaaaaaagcggaaagacgggca 581870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 4998184 - 4998240
Alignment:
Q  11 caatcatacccttaaacaactttttatataat-aaaattgttgttggtgtcattaaa 66  Q
    |||| ||| |||||||||||||||| |||||| |||||||||| |||||||||||||    
T  4998184 caattatatccttaaacaactttttctataataaaaattgttgctggtgtcattaaa 4998240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 20149350 - 20149294
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||||||||||||||||||||||| || || ||||||| | ||||||||| ||||    
T  20149350 caccgttcataattttcaaacgttagtgcgataaaaagagtggaaagacgggtacat 20149294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 23050862 - 23050918
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||| ||| ||||||||| ||||||||| |||||||||||    
T  23050862 caattatacccttaaacaactatttttataataaagattgttgtttgtgtcattaaa 23050918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Original strand, 48109824 - 48109880
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||||||||||| ||| | |||| |||| ||||||||||| |||||||    
T  48109824 caccgttcataattttcaaacattaacacaataaaaacagcgaaaagacaggcacat 48109880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 48624860 - 48624804
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||||||||||||||||| ||||||||| || ||||||||||||| ||||    
T  48624860 caattatacccttaaacaactttttctataataaagatcgttgttggtgtcactaaa 48624804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 19371922 - 19371969
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    |||||||||||||||| ||||||| ||||||| ||||||||| |||||    
T  19371922 caccgttcataattttgaaacgttggcgcaataaaaagagcggaaaga 19371969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 25610663 - 25610612
Alignment:
Q  10 tcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtc 60  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||||| ||||    
T  25610663 tcaattatacccttaaacaactttttctataataaagattgttgttgatgtc 25610612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 42963176 - 42963129
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaaga 263  Q
    |||||||||||||||||||| | ||||||||| ||||||||| |||||    
T  42963176 caccgttcataattttcaaatgctagcgcaataaaaagagcggaaaga 42963129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Original strand, 9412893 - 9412939
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    ||||||||||||||||||| ||||||||| ||||||||  |||||||    
T  9412893 cgttcataattttcaaacgatagcgcaataaaaagagcagaaagacg 9412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 15971024 - 15971062
Alignment:
Q  7 atttcaatcatacccttaaacaactttttatataataaa 45  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  15971024 atttcaattatacccttaaacaactttttctataataaa 15971062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 19491940 - 19492006
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaacttttta-tataataaaattgttgttggtgtcattaaa 66  Q
    ||||| || ||||| ||||| |||||||| |||||  ||||||||||||||||||| ||||||||||    
T  19491940 ttcattatctcaattatacctttaaacaattttttcctataataaaattgttgttgatgtcattaaa 19492006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 21093700 - 21093634
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||| ||| | |||||||||||||| ||||||||| ||  |||||||||||||||||    
T  21093700 ttcattatttcaattatatcattaaacaactttttctataataaagatcattgttggtgtcattaaa 21093634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 25750867 - 25750917
Alignment:
Q  35 tatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||||| ||||||||||||||||||||| |||| || |||||||||    
T  25750867 tatataataaagattgttgttggtgtcattaaaaaaagaatttagattata 25750917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 39434950 - 39435004
Alignment:
Q  31 tttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||| ||||||||| ||||||||||||||||||||| |||| || |||||||||    
T  39434950 tttttttataataaagattgttgttggtgtcattaaaaaaagaatttagattata 39435004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 39465822 - 39465876
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaaa-ttgttgttggtgtcatta 64  Q
    |||| ||||||||||  |||||||| |||||||||| ||||||||||||||||||    
T  39465822 caattatacccttaagtaactttttttataataaaaattgttgttggtgtcatta 39465876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 7151129 - 7151100
Alignment:
Q  16 atacccttaaacaactttttatataataaa 45  Q
    ||||||||||||||||||||||||||||||    
T  7151129 atacccttaaacaactttttatataataaa 7151100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 257
Target Start/End: Original strand, 22479801 - 22479838
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcg 257  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  22479801 gttcataattttcaaatgttagcgcaataaaaagagcg 22479838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 31283543 - 31283498
Alignment:
Q  22 ttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||||    
T  31283543 ttaaacaattttttctataataaagattgttgttggtgtcattaaa 31283498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 48103832 - 48103787
Alignment:
Q  22 ttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||    
T  48103832 ttaaacaactttttctataataaagattgttgttagtgtcattaaa 48103787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 5757099 - 5757055
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacg 265  Q
    ||||||||||||||||||||| ||||  ||||||||| |||||||    
T  5757099 ttcataattttcaaacgttagtgcaacaaaaagagcggaaagacg 5757055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 8390551 - 8390603
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggca 269  Q
    |||||||||||||||||||| |||||||||  |||| |  |||||||||||||    
T  8390551 accgttcataattttcaaacattagcgcaaaaaaaaaattgaaaagacgggca 8390603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 39466040 - 39466088
Alignment:
Q  224 ataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    |||||||||||| |||| |||||| ||||||||  ||||||||||||||    
T  39466040 ataattttcaaaagttaacgcaataaaaagagcagaaagacgggcacat 39466088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 40356203 - 40356243
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagc 256  Q
    ||||||||||||||||||||| |||||||| | ||||||||    
T  40356203 caccgttcataattttcaaactttagcgcagtaaaaagagc 40356243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 5840 - 5759
Alignment:
Q  1 ttcatcatttcaatcatacccttaaacaactttttatataataaaattgttgttggtgtcattaaacaaaggatatagattat 83  Q
    ||||||||| |||| ||| |||||||||||||||| || ||||||||||||||||| ||||||||| |||| || ||||||||    
T  5840 ttcatcattccaattatatccttaaacaactttttctaaaataaaattgttgttggcgtcattaaa-aaagaatttagattat 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 244 - 196
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacggg 267  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  244 cgttcataattttcaaacgttagcgcaaaaaaaagagcgaaaagacggg 196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 18683 - 18732
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  18683 ttcataatttttaaacgttagcgcaataaaaagagcggaaagacgggcac 18732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 2701 - 2750
Alignment:
Q  221 ttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  2701 ttcataatttttaaacgttagcgcaataaaaagagcggaaagacgggcac 2750  T

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Target: scaffold0268 (Bit Score: 36; Significance: 0.00000000005; HSPs: 3)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 21184 - 21299
Alignment:
Q  2 tcatcatttcaatcatacccttaaacaactttttat--ataataaaattgttgttggtgtcattaaacaaaggatatagattatannnnnnngttatatt 99  Q
    ||||||||  ||| ||||||||  |||||||||| |  ||| |||||||||||||||||||| |||| |||  || |||||||||       ||||||||    
T  21184 tcatcattcgaattatacccttggacaactttttctctatattaaaattgttgttggtgtcactaaaaaaataatttagattatatttttttgttatatt 21283  T
Q  100 gtattattgtcggtgt 115  Q
    ||||||||||||||||    
T  21284 gtattattgtcggtgt 21299  T

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Target: scaffold0268; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 21407 - 21453
Alignment:
Q  220 gttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    ||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  21407 gttcataattttcaaactttagcgcaataaaaagagcggaaagacgg 21453  T

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Target: scaffold0268; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 21585 - 21644
Alignment:
Q  10 tcaatcatacccttaaacaac--tttttatataataaa-attgttgttggtgtcattaaa 66  Q
    ||||| |||||||||||||||  ||||| ||||||||| ||||||||||||||| |||||    
T  21585 tcaattatacccttaaacaacagtttttctataataaagattgttgttggtgtcgttaaa 21644  T

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Target: scaffold0068 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 57490 - 57439
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||||||||||||||||||||||| |||| |||  ||||||||||||    
T  57490 cgttcataattttcaaacgttagcgcaataaaaatagcagaaagacgggcac 57439  T

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Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 30720 - 30666
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcac 270  Q
    ||||||||| ||||||| || ||||||||||| |||||||||||||||| |||||    
T  30720 caccgttcaaaattttctaaagttagcgcaataaaaagagcgaaaagacaggcac 30666  T

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Target: scaffold0649 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 8302 - 8249
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||| ||||||||||| ||| ||||||||| |||||||| |||||    
T  8302 cgttcataatttttaaacgttagcgtaataaaaagagcggaaagacggacacat 8249  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 61544 - 61592
Alignment:
Q  219 cgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacggg 267  Q
    ||||||||||||||||| |||| ||||||||||| |||| |||||||||    
T  61544 cgttcataattttcaaatgttaacgcaattaaaaaagcgtaaagacggg 61592  T

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Target: scaffold0036; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 61349 - 61412
Alignment:
Q  21 cttaaacaactttttatataataaa-attgttgttggtgtcattaaacaaaggatatagattata 84  Q
    ||||||||||||||||||||||||| ||||||||| || ||| |||| |||| || |||||||||    
T  61349 cttaaacaactttttatataataaagattgttgtttgtctca-taaaaaaagaatttagattata 61412  T

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Target: scaffold1379 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 1538 - 1483
Alignment:
Q  217 accgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgggcacat 272  Q
    ||||||||||||||||||||||||  ||||| |||| |||  ||||||||||||||    
T  1538 accgttcataattttcaaacgttaatgcaataaaaaaagcagaaagacgggcacat 1483  T

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Target: scaffold0229 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 13221 - 13255
Alignment:
Q  227 attttcaaacgttagcgcaattaaaagagcgaaaa 261  Q
    ||||||||||||||||||||| |||||||||||||    
T  13221 attttcaaacgttagcgcaataaaaagagcgaaaa 13255  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 41623 - 41561
Alignment:
Q  11 caatcatacccttaaacaact-ttttatataataaa-attgttgttggtgtcattaaacaaag 71  Q
    |||| |||||||||||||||| |||| ||||||||| |||||||||| |||||||||| ||||    
T  41623 caattatacccttaaacaacttttttctataataaagattgttgttgttgtcattaaaaaaag 41561  T

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Target: scaffold0294 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 1735 - 1783
Alignment:
Q  218 ccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagacgg 266  Q
    |||||||||||||| |||||||| |||||| |||||| | |||||||||    
T  1735 ccgttcataatttttaaacgttaacgcaataaaaagaacaaaaagacgg 1783  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 44246 - 44302
Alignment:
Q  11 caatcatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaa 66  Q
    |||| |||||| ||||||| ||||| | ||||||| |||||||||||||||||||||    
T  44246 caattatacccgtaaacaattttttctgtaataaagattgttgttggtgtcattaaa 44302  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 254695 - 254743
Alignment:
Q  216 caccgttcataattttcaaacgttagcgcaattaaaagagcgaaaagac 264  Q
    ||||||||||||| |||||||||||| ||||| ||||||| | ||||||    
T  254695 caccgttcataatcttcaaacgttagtgcaataaaaagagtggaaagac 254743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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