View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5330-Insertion-4 (Length: 107)
Name: NF5330-Insertion-4
Description: NF5330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5330-Insertion-4 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 92; Significance: 3e-45; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 92; E-Value: 3e-45
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 31437716 - 31437815
Alignment:
| Q |
8 |
caaccaagttatgcttggaggagcatcatgtgtggcagagaagtactagaaaagggcagcagatgggtggtgggtaatggaaaaagcatcaaaatttggc |
107 |
Q |
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| T |
31437716 |
caaccaagttatgcttggaggagcatcatgtgtggcagagaagtactagaaaagggcagcagatgggtggtgggtaatggaaaaagtatcgaaatttggc |
31437815 |
T |
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Target: chr8; HSP #2
Raw Score: 73; E-Value: 7e-34
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 31192721 - 31192818
Alignment:
| Q |
8 |
caaccaagttatgcttggaggagcatcatgtgtggcagagaagtactagaaaagggcagcagatgggtggtgggtaatggaaaaagcatcaaaatttggc |
107 |
Q |
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| T |
31192721 |
caaccaagctatgcttggaggagcatcatgtgtggcagagaagtactagaaaagggcaccagatgggtggtgggtaat--acaaagtatcaaaatttggc |
31192818 |
T |
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