View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5330_high_5 (Length: 264)

Name: NF5330_high_5
Description: NF5330
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5330_high_5
NF5330_high_5
[»] chr6 (30 HSPs)
chr6 (75-249)||(3573984-3574159)
chr6 (1-150)||(15528088-15528237)
chr6 (1-150)||(17250059-17250208)
chr6 (1-150)||(23897813-23897962)
chr6 (1-150)||(30912390-30912539)
chr6 (1-150)||(7223521-7223663)
chr6 (1-150)||(17543718-17543867)
chr6 (1-150)||(26053274-26053423)
chr6 (1-150)||(26073327-26073476)
chr6 (14-150)||(27233268-27233404)
chr6 (1-150)||(7918359-7918508)
chr6 (1-143)||(19748342-19748484)
chr6 (27-150)||(6943464-6943587)
chr6 (1-148)||(10509001-10509148)
chr6 (1-150)||(17103204-17103346)
chr6 (1-106)||(21354786-21354891)
chr6 (1-149)||(2912226-2912373)
chr6 (1-143)||(22498863-22499005)
chr6 (1-150)||(11327549-11327698)
chr6 (14-54)||(10508905-10508945)
chr6 (67-143)||(18491081-18491157)
chr6 (15-54)||(4841718-4841757)
chr6 (13-54)||(2912148-2912189)
chr6 (85-150)||(5422810-5422875)
chr6 (14-59)||(17103391-17103436)
chr6 (23-52)||(18490536-18490565)
chr6 (14-54)||(7918238-7918278)
chr6 (90-150)||(12245111-12245171)
chr6 (14-54)||(19748534-19748574)
chr6 (14-54)||(22498328-22498368)
[»] chr7 (37 HSPs)
chr7 (1-150)||(5058531-5058680)
chr7 (1-150)||(26281288-26281436)
chr7 (1-150)||(27221420-27221569)
chr7 (1-150)||(14055253-14055402)
chr7 (1-150)||(14365281-14365430)
chr7 (1-150)||(24990049-24990198)
chr7 (3-150)||(8346513-8346660)
chr7 (1-143)||(11324988-11325129)
chr7 (1-150)||(5715292-5715440)
chr7 (1-150)||(44944823-44944976)
chr7 (1-150)||(4247358-4247507)
chr7 (1-150)||(24725455-24725604)
chr7 (3-131)||(8343780-8343908)
chr7 (1-148)||(17811355-17811498)
chr7 (8-150)||(22687649-22687791)
chr7 (1-150)||(9685222-9685371)
chr7 (1-150)||(7730321-7730469)
chr7 (14-150)||(11326388-11326524)
chr7 (1-147)||(27509921-27510067)
chr7 (1-150)||(8330023-8330172)
chr7 (1-143)||(26617450-26617596)
chr7 (14-135)||(39182277-39182397)
chr7 (28-143)||(8571252-8571367)
chr7 (30-150)||(21846433-21846552)
chr7 (1-86)||(20570863-20570948)
chr7 (14-97)||(1977707-1977790)
chr7 (1-82)||(6916852-6916931)
chr7 (14-54)||(7730247-7730287)
chr7 (14-54)||(21846335-21846375)
chr7 (14-59)||(4247552-4247597)
chr7 (14-54)||(26565436-26565476)
chr7 (22-57)||(26281219-26281254)
chr7 (60-142)||(21157811-21157893)
chr7 (86-135)||(4574488-4574537)
chr7 (14-43)||(8329867-8329896)
chr7 (14-54)||(8329932-8329972)
chr7 (14-54)||(24725360-24725400)
[»] chr5 (19 HSPs)
chr5 (1-150)||(43234870-43235019)
chr5 (1-150)||(18051508-18051657)
chr5 (1-150)||(19578944-19579093)
chr5 (1-150)||(18843717-18843866)
chr5 (27-150)||(20923720-20923843)
chr5 (8-150)||(22645704-22645846)
chr5 (1-150)||(23172406-23172559)
chr5 (1-150)||(21059134-21059282)
chr5 (2-143)||(27340165-27340306)
chr5 (1-134)||(41688643-41688775)
chr5 (1-150)||(38158232-38158381)
chr5 (1-103)||(19979648-19979750)
chr5 (1-103)||(20320992-20321093)
chr5 (11-53)||(19042406-19042448)
chr5 (16-54)||(38158154-38158192)
chr5 (14-54)||(18843916-18843956)
chr5 (14-54)||(20321144-20321184)
chr5 (14-54)||(21059045-21059085)
chr5 (118-150)||(24647941-24647973)
[»] chr4 (31 HSPs)
chr4 (1-150)||(5361941-5362090)
chr4 (1-130)||(9911389-9911518)
chr4 (1-150)||(36120826-36120975)
chr4 (6-150)||(9770114-9770258)
chr4 (1-150)||(17466081-17466230)
chr4 (1-150)||(13551600-13551749)
chr4 (1-150)||(5375666-5375815)
chr4 (5-143)||(8889237-8889375)
chr4 (1-150)||(10142901-10143050)
chr4 (9-150)||(23064949-23065090)
chr4 (19-150)||(8011212-8011343)
chr4 (1-150)||(13023569-13023721)
chr4 (1-150)||(37240264-37240408)
chr4 (48-150)||(7044729-7044831)
chr4 (48-150)||(7452422-7452523)
chr4 (48-150)||(18459733-18459835)
chr4 (49-150)||(4156765-4156866)
chr4 (48-148)||(7815561-7815661)
chr4 (87-143)||(46664421-46664477)
chr4 (59-150)||(24719519-24719610)
chr4 (17-54)||(4157053-4157090)
chr4 (48-97)||(10394565-10394614)
chr4 (14-54)||(10143101-10143141)
chr4 (14-53)||(6346843-6346882)
chr4 (73-148)||(6347114-6347189)
chr4 (14-48)||(24719782-24719816)
chr4 (14-54)||(7044964-7045004)
chr4 (14-54)||(8011024-8011064)
chr4 (14-50)||(9911299-9911335)
chr4 (14-54)||(17466280-17466320)
chr4 (14-54)||(36121024-36121064)
[»] chr8 (28 HSPs)
chr8 (1-150)||(15294672-15294821)
chr8 (1-150)||(15475041-15475190)
chr8 (20-148)||(3094250-3094378)
chr8 (1-150)||(11879602-11879751)
chr8 (1-150)||(11897018-11897167)
chr8 (1-150)||(19704433-19704583)
chr8 (1-150)||(5922051-5922200)
chr8 (1-150)||(17646995-17647144)
chr8 (1-150)||(27836442-27836591)
chr8 (1-113)||(6810861-6810972)
chr8 (5-148)||(31424167-31424310)
chr8 (1-103)||(23142224-23142326)
chr8 (1-137)||(22910180-22910316)
chr8 (1-150)||(45403031-45403180)
chr8 (12-113)||(29384306-29384406)
chr8 (1-148)||(6292320-6292467)
chr8 (1-132)||(7489261-7489393)
chr8 (1-64)||(9212233-9212296)
chr8 (1-82)||(32424402-32424483)
chr8 (14-102)||(15231774-15231862)
chr8 (14-54)||(29384200-29384240)
chr8 (77-150)||(477101-477174)
chr8 (14-54)||(17647198-17647238)
chr8 (20-52)||(26879778-26879810)
chr8 (20-52)||(30240264-30240296)
chr8 (22-59)||(26574948-26574985)
chr8 (14-54)||(15761246-15761286)
chr8 (14-50)||(23142379-23142415)
[»] chr3 (42 HSPs)
chr3 (1-150)||(29067286-29067435)
chr3 (1-150)||(20756041-20756190)
chr3 (1-143)||(17064330-17064472)
chr3 (1-150)||(3449270-3449418)
chr3 (1-149)||(39427905-39428053)
chr3 (13-150)||(28745772-28745909)
chr3 (1-145)||(21963436-21963579)
chr3 (1-145)||(21985872-21986015)
chr3 (1-143)||(22356030-22356173)
chr3 (1-150)||(8156108-8156258)
chr3 (1-150)||(24620178-24620330)
chr3 (26-135)||(30727694-30727803)
chr3 (1-79)||(42696920-42696998)
chr3 (1-150)||(22137280-22137428)
chr3 (19-150)||(24649684-24649816)
chr3 (22-113)||(22494780-22494871)
chr3 (50-150)||(28135724-28135824)
chr3 (48-138)||(15806531-15806621)
chr3 (6-150)||(25870350-25870503)
chr3 (52-150)||(17796379-17796477)
chr3 (52-150)||(17796488-17796586)
chr3 (52-150)||(19104819-19104917)
chr3 (52-150)||(19104928-19105026)
chr3 (14-54)||(3449198-3449238)
chr3 (14-54)||(6136457-6136497)
chr3 (52-148)||(17796272-17796368)
chr3 (15-51)||(17796771-17796807)
chr3 (52-148)||(19104712-19104808)
chr3 (15-51)||(19105211-19105247)
chr3 (14-54)||(25870210-25870250)
chr3 (1-64)||(15515234-15515297)
chr3 (14-54)||(10872603-10872643)
chr3 (14-54)||(13286145-13286185)
chr3 (14-54)||(17064508-17064548)
chr3 (14-54)||(20756223-20756263)
chr3 (14-54)||(21963632-21963672)
chr3 (14-54)||(21986068-21986108)
chr3 (14-54)||(22137478-22137518)
chr3 (14-54)||(27676637-27676677)
chr3 (14-54)||(28745977-28746017)
chr3 (14-54)||(39428104-39428144)
chr3 (14-54)||(42697049-42697089)
[»] chr1 (30 HSPs)
chr1 (1-150)||(13276244-13276393)
chr1 (1-150)||(19009924-19010073)
chr1 (1-150)||(23528658-23528807)
chr1 (1-150)||(9955013-9955162)
chr1 (1-135)||(16125433-16125570)
chr1 (1-150)||(9327193-9327342)
chr1 (14-150)||(41032661-41032797)
chr1 (1-150)||(12513283-12513432)
chr1 (1-150)||(25146747-25146895)
chr1 (1-150)||(42180043-42180192)
chr1 (1-148)||(13100195-13100342)
chr1 (1-150)||(18304789-18304938)
chr1 (1-150)||(9352041-9352190)
chr1 (5-150)||(17869732-17869872)
chr1 (1-150)||(9128818-9128967)
chr1 (26-150)||(21846271-21846395)
chr1 (19-132)||(17055995-17056108)
chr1 (2-64)||(32881415-32881477)
chr1 (1-75)||(18228278-18228351)
chr1 (86-150)||(34478833-34478897)
chr1 (1-53)||(47785958-47786010)
chr1 (85-150)||(30619077-30619142)
chr1 (48-150)||(18337547-18337648)
chr1 (57-150)||(14074404-14074497)
chr1 (14-54)||(13100391-13100431)
chr1 (71-150)||(12800629-12800708)
chr1 (14-50)||(16125343-16125379)
chr1 (14-54)||(18304699-18304739)
chr1 (14-54)||(21846162-21846202)
chr1 (14-54)||(23528857-23528897)
[»] scaffold0417 (1 HSPs)
scaffold0417 (1-150)||(7433-7582)
[»] chr2 (27 HSPs)
chr2 (1-150)||(31237955-31238104)
chr2 (1-150)||(1404785-1404934)
chr2 (1-150)||(31578007-31578155)
chr2 (1-150)||(35565932-35566081)
chr2 (1-107)||(30432464-30432570)
chr2 (1-150)||(36429850-36429999)
chr2 (23-150)||(23863321-23863448)
chr2 (1-143)||(15588828-15588969)
chr2 (19-150)||(25539222-25539353)
chr2 (1-150)||(20063716-20063865)
chr2 (46-150)||(1690785-1690889)
chr2 (50-150)||(17995057-17995157)
chr2 (26-113)||(19491896-19491982)
chr2 (5-63)||(1690710-1690768)
chr2 (53-150)||(16766712-16766809)
chr2 (14-54)||(13502561-13502601)
chr2 (14-53)||(27406993-27407032)
chr2 (50-113)||(31023262-31023325)
chr2 (88-150)||(15516624-15516686)
chr2 (48-136)||(13503067-13503156)
chr2 (14-43)||(16766997-16767026)
chr2 (14-54)||(15588742-15588782)
chr2 (20-52)||(19519577-19519609)
chr2 (14-54)||(30433016-30433056)
chr2 (49-125)||(34841583-34841659)
chr2 (20-52)||(34841784-34841816)
chr2 (14-54)||(35565845-35565885)
[»] scaffold0186 (2 HSPs)
scaffold0186 (1-150)||(8445-8594)
scaffold0186 (14-54)||(8642-8682)
[»] scaffold0042 (2 HSPs)
scaffold0042 (5-150)||(93688-93831)
scaffold0042 (14-54)||(93593-93633)
[»] scaffold0510 (1 HSPs)
scaffold0510 (14-150)||(91-228)
[»] scaffold0036 (1 HSPs)
scaffold0036 (48-150)||(37191-37293)
[»] scaffold0048 (1 HSPs)
scaffold0048 (74-150)||(48839-48915)
[»] scaffold0603 (1 HSPs)
scaffold0603 (14-54)||(8847-8887)
[»] scaffold0016 (1 HSPs)
scaffold0016 (14-54)||(56313-56353)


Alignment Details
Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 75 - 249
Target Start/End: Original strand, 3573984 - 3574159
Alignment:
Q  75 atggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaacaccgaaaatacataagatgtgttct 174  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| | |||||| |||||||||||||| ||||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaacaccaaaaatacataagatatgttct 3574083  T
Q  175 ctcttttcatcc-aattttctctatcgaactcgtgagcacttgtttaaagagttcaaatttcttacaatttgaatc 249  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  3574084 ctcttttcatccgaattttctctatcgaacttgtgagcacttgtttaaagagtccaaaattcttacaatttgaatc 3574159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 15528088 - 15528237
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||  ||||||||||| ||||| |||||| |||||||||    
T  15528088 aaatgacttagtttataagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaagattctactatgaatttaagtcgttaaaggtgaag 15528187  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||||| ||||| ||||||    
T  15528188 aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaaca 15528237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17250208 - 17250059
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||| | |||||| |||||||||| ||||||||||||||||    
T  17250208 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaaggtgaag 17250109  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||| || |||| ||| |||||| |||||||||||| ||||||||||||    
T  17250108 aaagttgcaaaatcctggattttaggatttaagtcgggattttaacaaca 17250059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 23897962 - 23897813
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||  ||||||||| ||||||    
T  23897962 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacgtgaag 23897863  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||| |||||| |||||||||||| || ||| |||||    
T  23897862 aaagtcgcaaaatcctgcattttaggatttaagtcgggatcttatcaaca 23897813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 30912390 - 30912539
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||   |||||| |||||||||  ||||||||||||||||    
T  30912390 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtgattctattatggatttgagtcgttgaaggtgaag 30912489  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| || ||||||| ||||||||| || ||||| ||||||    
T  30912490 aaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaaca 30912539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 7223663 - 7223521
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| |       ||||||||    
T  7223663 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattctactatggatttaag-------aggtgaag 7223571  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| || ||||||| |||||||||||| ||||| ||||||    
T  7223570 aaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaaca 7223521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 17543718 - 17543867
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||  || |||||||| |||||||  ||||||||||||||||  ||||||||| |||||     
T  17543718 aaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagattttgcttattttaagattctactatggatttgagtcgttgaaagtgaaa 17543817  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||||  ||||| ||||||    
T  17543818 aaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaaca 17543867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 26053274 - 26053423
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| | |||||| |||| ||||  ||| ||||||||||||    
T  26053274 aaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaag 26053373  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||  ||||||||||||||||||| ||||| ||||||    
T  26053374 aaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaaca 26053423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 26073327 - 26073476
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| | |||||| |||| ||||  ||| ||||||||||||    
T  26073327 aaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaag 26073426  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||  ||||||||||||||||||| ||||| ||||||    
T  26073427 aaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaaca 26073476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 27233268 - 27233404
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaat 113  Q
    ||||||||||| |||||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||| |||||||||||||||||||||| | ||||    
T  27233268 tataagaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggtgaagaaagtcacaaaat 27233367  T
Q  114 tctgaattttaagatttaagtcggaattttaacaaca 150  Q
     ||| |||||| |||||||||||| | ||| ||||||    
T  27233368 cctggattttaggatttaagtcggtagtttgacaaca 27233404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 7918359 - 7918508
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||| ||||||| |||||| |||||| |||||||||| ||| |||||||| ||| |||| ||| ||||||||||||| |||||||||||||||     
T  7918359 aaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatggatttaagtcgttgaaggtgaaa 7918458  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||||||||||  ||||||||||| ||||| ||||||    
T  7918459 aaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaaca 7918508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 19748484 - 19748342
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||  ||||||||| ||||||  ||| || |||||||||    
T  19748484 aaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggtgaag 19748385  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    ||| || | |||| ||| ||| ||||||||||||||| |||||    
T  19748384 aaaatctcaaaatcctggattgtaagatttaagtcgggatttt 19748342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 150
Target Start/End: Original strand, 6943464 - 6943587
Alignment:
Q  27 aaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaag 126  Q
    ||||||||||||||||| |||| |||||| |||||||   |||||||||| |||||  |||||||||||||||||||||||| |||| |||||||||| |    
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  127 atttaagtcggaattttaacaaca 150  Q
    ||||||||||| ||||| ||||||    
T  6943564 atttaagtcgggattttgacaaca 6943587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 10509001 - 10509148
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||| || ||||||||||| ||||||||| |||| |||||||||||||| | ||||||||||  ||||  ||| ||||| ||||||    
T  10509001 aaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtcattgaatgtgaag 10509100  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 148  Q
    |||||| | || |||||||||||| |||||||||| | ||||| ||||    
T  10509101 aaagtcacaaatttctgaattttaggatttaagtctggattttgacaa 10509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17103346 - 17103204
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| | ||||||||||| ||||  ||||||||| ||        
T  17103346 aaataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaagt---- 17103251  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
       ||||| |||| ||||||||||||||||||||||| ||||| ||||||    
T  17103250 ---gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaaca 17103204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 21354891 - 21354786
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||| | ||||||| ||||||||| |||||||||||| |||    
T  21354891 aaattacttagtttataagaaatcgtaaaatcgcaataaaaaacgatggattttgtctattttgggattctaccatggatttaagtcgttgaaggtaaag 21354792  T
Q  101 aaagtc 106  Q
    ||||||    
T  21354791 aaagtc 21354786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 2912226 - 2912373
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||| |||||||| |||||||||||| ||||||||||| |||| ||||||| |||||||  |||||||||| |||||   ||||||||| || ||    
T  2912226 aaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttgaagatggag 2912324  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaac 149  Q
    ||||| || |||| || |||||||||||||||||||| ||||| |||||    
T  2912325 aaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22498863 - 22499005
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||   ||| ||||||||||||  |||||| |||||||||    
T  22498863 aaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggatttgagtcgttcaaggtgaag 22498962  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    |||||||| ||||| || | |||| ||||| ||| || |||||    
T  22498963 aaagtcgcaaaattgtggaatttaggattttagttgggatttt 22499005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 11327549 - 11327698
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||| |||||| |||||||| |||||||||||||| ||||| |||| |||||||||||||| | ||||||||||||||||| ||| |||||| |||||    
T  11327549 aaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaag 11327648  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||  ||| |||   || |||||| | |||||||||| ||||| ||||||    
T  11327649 aaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaaca 11327698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 10508905 - 10508945
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  10508905 tataagaaattgtaaaatcgcaatcaaaattgatggatttt 10508945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 18491081 - 18491157
Alignment:
Q  67 attctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    ||||| ||||||||||  ||||||||||||||| ||||  || |||||||| |||||| |||||||||||| |||||    
T  18491081 attctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggatttt 18491157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 4841718 - 4841757
Alignment:
Q  15 ataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  4841718 ataagaaatcgtaaaatcgcaatcaaaatcgatgtatttt 4841757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 2912148 - 2912189
Alignment:
Q  13 ttataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||| ||||||||||||||||||| || |||||||    
T  2912148 ttataagaaattgtaaaatcgcaatcaaaatcgacggatttt 2912189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 5422810 - 5422875
Alignment:
Q  85 gtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||||||||||||| ||||| || ||||  |||||||||  ||||||||||| ||||| ||||||    
T  5422810 gtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaaca 5422875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 17103436 - 17103391
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgccta 59  Q
    |||| ||||| ||||||||||||||||||| |||||||||| ||||    
T  17103436 tataggaaattgtaaaatcgcaatcaaaatcgatggattttaccta 17103391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 52
Target Start/End: Original strand, 18490536 - 18490565
Alignment:
Q  23 tcgtaaaatcgcaatcaaaattgatggatt 52  Q
    ||||||||||||||||||||||||||||||    
T  18490536 tcgtaaaatcgcaatcaaaattgatggatt 18490565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 7918238 - 7918278
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  7918238 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 7918278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 150
Target Start/End: Complemental strand, 12245171 - 12245111
Alignment:
Q  90 tgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||| ||||| |||||||| |||| |||||||||||||||||| ||   ||||||||||||    
T  12245171 tgaaagtgaataaagtcgcaaaatactgaattttaagatttaaatcatgattttaacaaca 12245111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 19748574 - 19748534
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  19748574 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 19748534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 22498328 - 22498368
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  22498328 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 22498368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 5058680 - 5058531
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  5058680 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtgaag 5058581  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||| |||| ||||||||||||||| |||||||||||| ||||| ||||||    
T  5058580 aaaatcgcaaaattctgaattttaggatttaagtcgggattttgacaaca 5058531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 26281288 - 26281436
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| |||||| ||||||||| ||||||||  ||||||||||||||||    
T  26281288 aaatgacttagtttataagaaatcgttaaatcgcaa-caaaatcgatggattttgcttattttggaattctacaatggatttgagtcgttgaaggtgaag 26281386  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||||||||||| ||||||    
T  26281387 aaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaaca 26281436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 27221569 - 27221420
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||||||||||| ||||  |||||||||| |||||    
T  27221569 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaagattctactatgtatttgagtcgttgaagatgaag 27221470  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||||||||||  |||||||| || ||||||||||||    
T  27221469 aaagtcgcaaaatcctgaattttagaatttaagttgggattttaacaaca 27221420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 14055402 - 14055253
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  14055402 aaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaag 14055303  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| ||||  || |||||| ||| ||||| || ||||| ||||||    
T  14055302 aaagtcgcaaaatcttggattttaggatataagtggggattttcacaaca 14055253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 14365430 - 14365281
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  14365430 aaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttgaaggtgaag 14365331  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| ||||  || |||||| ||| ||||| || ||||| ||||||    
T  14365330 aaagtcgcaaaatcttggattttaggatataagtggggattttcacaaca 14365281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 24990049 - 24990198
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||| |||| |||    
T  24990049 aaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttggaggtaaag 24990148  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||| | |||| || ||||||  |||||||||||||||||| ||||||    
T  24990149 aaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaaca 24990198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 8346513 - 8346660
Alignment:
Q  3 atgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaa 102  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||||| | ||||||||||||||||  ||||||||||||||||||    
T  8346513 atgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggatttttcctattttgggattctactatggatttgagtcgttgaaggtgaagaa 8346612  T
Q  103 agtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||| |||| || |||||||| ||||| ||| | ||||| ||||||    
T  8346613 agtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 11325129 - 11324988
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||    
T  11325129 aaatgacttagtttataagaaatcgtaaattcgcaatcaaaatt-atgaattttgcctattttagaattctattatggatttgagtcgttgaaggtgaag 11325031  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    ||| || | ||||  ||||||||| |||||||||||| |||||    
T  11325030 aaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 5715440 - 5715292
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||||| ||||||||||||| ||||| || |||||||||| |     
T  5715440 aaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtgta- 5715342  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||||| ||||| ||||||    
T  5715341 aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaaca 5715292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 44944823 - 44944976
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaag----gt 96  Q
    ||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||   |||||||||    ||    
T  44944823 aaatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggattttgactattttaggattctactatggatttgaatcgttgaaggtgagt 44944922  T
Q  97 gaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||||||| |||| |||||||||| |||||||||||| ||||| ||||||    
T  44944923 gaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaaca 44944976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 4247507 - 4247358
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| | ||||||||||||||||| || |||||| ||||||    
T  4247507 aaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaagtgaag 4247408  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||  | |||| |||||||||| ||||||| | || ||||| ||||||    
T  4247407 aaagttacaaaatcctgaattttaggatttaaattgggattttgacaaca 4247358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 24725455 - 24725604
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||   ||||||||||||||||  || |||||||||||||    
T  24725455 aaatgacttagtttataagaaatcgtcaaatcgtaatcaaaattgatggattttgcctattttgcgattctactatggatttgagttgttgaaggtgaag 24725554  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||  ||||  || |||||| |||||||||| | ||||| ||||||    
T  24725555 aaagtcgtaaaatcttggattttaggatttaagtctggattttgacaaca 24725604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 8343780 - 8343908
Alignment:
Q  3 atgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaa 102  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||| | ||||||||||||||||  ||||||||||||||||||    
T  8343780 atgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggatttttcatattttgggattctactatggatttgagtcgttgaaggtgaagaa 8343879  T
Q  103 agtcgcgaaattctgaattttaagattta 131  Q
    |||||| |||| | | |||||| ||||||    
T  8343880 agtcgcaaaatccaggattttaggattta 8343908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 17811498 - 17811355
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||| |||||||||||||||||  |||||||||||||||     
T  17811498 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggtgaaa 17811399  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 148  Q
    |||||| | ||||   |||||||||    |||||||||||||| ||||    
T  17811398 aaagtcacaaaatcaagaattttaa----taagtcggaattttgacaa 17811355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 22687649 - 22687791
Alignment:
Q  8 ttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcg 107  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | ||||| | ||||||||  || ||||||| ||||||||||||    
T  22687649 ttagtttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgttgaagttgaagaaagtcg 22687748  T
Q  108 cgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    | || | |||||||||| |||||||||||| ||||| ||||||    
T  22687749 caaattcctgaattttaggatttaagtcgggattttgacaaca 22687791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9685222 - 9685371
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||  ||||||| |||||||||  |||||||||||||||     
T  9685222 aaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaa 9685321  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| || ||||||| ||| |||||||  ||||| ||||||    
T  9685322 aaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaaca 9685371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 7730321 - 7730469
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||| ||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||||||||| |||||||  || ||| |||||||||    
T  7730321 aaatgatttagtttataagaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtgaag 7730420  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||  ||| |||||| |||||||||| | ||||| ||||||    
T  7730421 aaagtcgc-aaaacctggattttaggatttaagtcaggattttgacaaca 7730469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 11326524 - 11326388
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaat 113  Q
    |||| ||||| ||||||||||||||||||| ||| ||||||||||||||||  ||||||||||||||||  |||| ||||||||||||||||||| ||||    
T  11326524 tataggaaattgtaaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaat 11326425  T
Q  114 tctgaattttaagatttaagtcggaattttaacaaca 150  Q
     || ||||||| ||||||||| || ||||| ||||||    
T  11326424 cctaaattttaggatttaagttgggattttgacaaca 11326388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 27509921 - 27510067
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||| |||||   |||||| | ||||||    
T  27509921 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttggatgtgaag 27510020  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 147  Q
    ||| |||| |||| ||  ||||||  |||||| |||  |||||||||    
T  27510021 aaaatcgcaaaatcctttattttagaatttaattcgatattttaaca 27510067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 8330023 - 8330172
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||| |||||||||||||||||| |||||  ||| ||||| |||||||| | ||||||||||||||||   |||||||||||||||    
T  8330023 aaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaatttttcctattttgggattctactatggatttgaatcgttgaaggtgaag 8330122  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| ||||  |||||||||  ||||| ||| | ||||| ||||||    
T  8330123 aaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaaca 8330172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 26617450 - 26617596
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctat--tttagaattctactat--ggatttaggtcgttgaaggt 96  Q
    |||||||||||| || ||||  ||||||||||||||||||||| ||| ||||||||||||  ||||||||||||||||  | ||||| ||||||||||||    
T  26617450 aaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattttgcctatattttagaattctactatatgaatttatgtcgttgaaggt 26617549  T
Q  97 gaagaaagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    ||| |||||||| |||| |||||||||| |||| ||||| |||||||    
T  26617550 gaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaatttt 26617596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 39182397 - 39182277
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaat 113  Q
    |||||||||| |||||||||||| |||||| ||||||||||||||||||| | ||||||||||||||||  |||||||||||||||| ||||||| ||||    
T  39182397 tataagaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaat 39182299  T
Q  114 tctgaattttaagatttaagtc 135  Q
     ||  |||||| ||||||||||    
T  39182298 cctagattttaggatttaagtc 39182277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 28 - 143
Target Start/End: Complemental strand, 8571367 - 8571252
Alignment:
Q  28 aaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaaga 127  Q
    |||||||||||||||| ||||| ||||  ||||||||| ||||||||||||||||  |||||| ||||||||||||||||| |||| ||| |||||| ||    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  128 tttaagtcggaatttt 143  Q
    |||||||||| |||||    
T  8571267 tttaagtcgggatttt 8571252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 21846433 - 21846552
Alignment:
Q  30 atcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatt 129  Q
    |||||||||||||| ||| |||||| ||| ||||||||||||||||||||| |  ||||||||| ||||| |||||||| |||| ||||||||||  |||    
T  21846433 atcgcaatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaattttagaatt 21846531  T
Q  130 taagtcggaattttaacaaca 150  Q
    |||||||| ||||| ||||||    
T  21846532 taagtcgggattttgacaaca 21846552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 20570863 - 20570948
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggt 86  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||   |||||||||| |||||||||    
T  20570863 aaatgacttattttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttttagattctactatagatttaggt 20570948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 1977790 - 1977707
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtg 97  Q
    ||||||||||| |||||||||||||||||| || | ||||||| |||||||| ||||||||||||||||  |||||||||||||    
T  1977790 tataagaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtcgttgaaggtg 1977707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6916931 - 6916852
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggattt 82  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||  |  |||||||||||||||||| ||||    
T  6916931 aaatgacttaatttataagaaatcgtaaaatcgcaatcaaaaccgatggattttaac--ttttagaattctactatgaattt 6916852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 7730247 - 7730287
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  7730247 tataagaaattgtaaaatcgcaatcaaaattgatggatttt 7730287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 21846335 - 21846375
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  21846335 tataagaaatcgtaaaatcacaatcaaaattgatggatttt 21846375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 59
Target Start/End: Complemental strand, 4247597 - 4247552
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgccta 59  Q
    ||||||||||| |||||||||||||||||| |||||||||| ||||    
T  4247597 tataagaaatcataaaatcgcaatcaaaatcgatggattttaccta 4247552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 26565436 - 26565476
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  26565436 tataaaaaatcgtaaaattgcaatcaaaattgatggatttt 26565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 26281219 - 26281254
Alignment:
Q  22 atcgtaaaatcgcaatcaaaattgatggattttgcc 57  Q
    ||||||||||||||||||||||||| ||||||||||    
T  26281219 atcgtaaaatcgcaatcaaaattgaaggattttgcc 26281254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 21157811 - 21157893
Alignment:
Q  60 ttttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattt 142  Q
    |||||| ||| | ||||||||||  ||||||| | ||||  |||||||| |||  ||||||||||||||||||||| ||||||    
T  21157811 ttttaggattttgctatggatttgagtcgttgtaagtgagtaaagtcgcaaaaccctgaattttaagatttaagtcagaattt 21157893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 4574537 - 4574488
Alignment:
Q  86 tcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtc 135  Q
    |||||||||||||  |||||||| |||||||| |||||| ||||||||||    
T  4574537 tcgttgaaggtgagtaaagtcgcaaaattctggattttaggatttaagtc 4574488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 43
Target Start/End: Original strand, 8329867 - 8329896
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaat 43  Q
    ||||||||||||||||||||||||||||||    
T  8329867 tataagaaatcgtaaaatcgcaatcaaaat 8329896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 8329932 - 8329972
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||||||||||| |||||||||||  |||||||||    
T  8329932 tataagaaatcgtaaaattgcaatcaaaatcaatggatttt 8329972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 24725360 - 24725400
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  24725360 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 24725400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 43235019 - 43234870
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||| |||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  43235019 aaatgacttagttgataagaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggtgaag 43234920  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| ||||||||| || ||||| ||||||    
T  43234919 aaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaaca 43234870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 18051508 - 18051657
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||  |||||||||| |||||    
T  18051508 aaatgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagttgaag 18051607  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||  |||||| |||||||||||| ||||| ||||||    
T  18051608 aaagtcgcaaaatcctatattttaggatttaagtcgggattttgacaaca 18051657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 19579093 - 19578944
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||    
T  19579093 aaatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaaggtgaag 19578994  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||| |||| |||| ||| |||||| ||||||||| |||||||| ||||||    
T  19578993 aaaatcgcaaaatcctggattttatgatttaagttggaattttgacaaca 19578944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 18843866 - 18843717
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| |||| |||||| ||||||| | ||||||| ||||||||  ||||||||||||||||    
T  18843866 aaatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtgaag 18843767  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||||||| || |||||||||||||||||||||||||    
T  18843766 aaagtcgcaaaatcctgaattataggatttaagtcggaattttaacaaca 18843717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 20923843 - 20923720
Alignment:
Q  27 aaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaag 126  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |    
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  127 atttaagtcggaattttaacaaca 150  Q
    ||||||||||| ||||| ||||||    
T  20923743 atttaagtcgggattttgacaaca 20923720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 22645704 - 22645846
Alignment:
Q  8 ttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcg 107  Q
    |||||||||||||||| ||||||||||||||||||| |||||| ||| | |||||| | ||| |||||||||||||  ||||||||||||||||||||||    
T  22645704 ttagtttataagaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttgaaggtgaagaaagtcg 22645803  T
Q  108 cgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    | |||| ||| |||||| |||||||||||| ||||| ||||||    
T  22645804 caaaatactggattttaggatttaagtcgggattttgacaaca 22645846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 23172406 - 23172559
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggat----tttgcctattttagaattctactatggatttaggtcgttgaaggt 96  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||| |||    |||| ||||||| | ||||||||||||||||| |||||||||| |    
T  23172406 aaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtctattttgggattctactatggatttaagtcgttgaagat 23172505  T
Q  97 gaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||||||| |||| || ||||||| |||||||||||| ||||| ||||||    
T  23172506 gaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaaca 23172559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 21059134 - 21059282
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||  | ||||||| ||||||||  ||||||||| ||||||    
T  21059134 aaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttagggattctac-atggatttgagtcgttgaaagtgaag 21059232  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||  |||||| ||||||| |||| ||||| ||||||    
T  21059233 aaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaaca 21059282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 143
Target Start/End: Original strand, 27340165 - 27340306
Alignment:
Q  2 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaaga 101  Q
    ||||||||||||||||||||||  ||||||| |||||||||| |||| |||||||||||||||  |||||||||| |||||  |||||||||| ||||||    
T  27340165 aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcctattttaagattctactatagatttgagtcgttgaagatgaaga 27340264  T
Q  102 aagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    ||||||| ||||  | ||||||| |||||||||||| |||||    
T  27340265 aagtcgcaaaatcataaattttatgatttaagtcgggatttt 27340306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 41688643 - 41688775
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||  ||||| ||||||||||||||||    
T  41688643 aaatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtgaag 41688742  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagt 134  Q
    ||| | || ||| || |||||||| |||||||||    
T  41688743 aaaattgc-aaaatccgaattttaggatttaagt 41688775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 38158232 - 38158381
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||| ||||||||||||||||||||||||  ||| ||||||  |||||||||| ||||||| | |||||||| |||||||  || |||||| || |||    
T  38158232 aaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattttgtctattttgggattctactctggatttgagttgttgaaagtcaag 38158331  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||  |||||| |||||||||||||||||| ||||||    
T  38158332 aaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaaca 38158381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 19979750 - 19979648
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | |||| | ||||||| ||| ||||  |||||||||| |||||    
T  19979750 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgttttgggattctaccatgaatttgagtcgttgaagatgaag 19979651  T
Q  101 aaa 103  Q
    |||    
T  19979650 aaa 19979648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 20321093 - 20320992
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| |||||  ||||||| ||||| ||||||||||||  ||| ||||||||||||    
T  20321093 aaatgacttagtttataagaa-tcgtaaaatcgcaatcaaagttgatgaattttatctattttggaattttactatggattttagtcattgaaggtgaag 20320995  T
Q  101 aaa 103  Q
    |||    
T  20320994 aaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 19042406 - 19042448
Alignment:
Q  11 gtttataagaaatcgtaaaatcgcaatcaaaattgatggattt 53  Q
    ||||||||||||||||||||||||||||||||| ||| |||||    
T  19042406 gtttataagaaatcgtaaaatcgcaatcaaaatcgatagattt 19042448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 38158154 - 38158192
Alignment:
Q  16 taagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  38158154 taagaaattgtaaaatcacaatcaaaattgatggatttt 38158192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 18843956 - 18843916
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  18843956 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 18843916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 20321184 - 20321144
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  20321184 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 20321144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 21059045 - 21059085
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||  |||||||||||||||||| ||||||||||    
T  21059045 tataagaaattataaaatcgcaatcaaaatcgatggatttt 21059085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 24647973 - 24647941
Alignment:
Q  118 aattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||||||||||||||||||||| ||||||    
T  24647973 aattttaagatttaagtcggaattttgacaaca 24647941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 102; Significance: 1e-50; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 5361941 - 5362090
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||||||||||||||||  |||||||||| |||||    
T  5361941 aaatgacttagtttataagaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttggaattctactatggatttgagtcgttgaagatgaag 5362040  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||||| ||||| ||||||    
T  5362041 aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaaca 5362090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 9911389 - 9911518
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  9911389 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtgaag 9911488  T
Q  101 aaagtcgcgaaattctgaattttaagattt 130  Q
    ||||| || ||||  ||||||||| |||||    
T  9911489 aaagttgcaaaatcttgaattttaggattt 9911518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 36120975 - 36120826
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| || |||||||||| ||||||||||||||||    
T  36120975 aaatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtgaag 36120876  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||| |||| |||| || |||||||| |||||| |||||||||| ||||||    
T  36120875 aaaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaaca 36120826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 9770258 - 9770114
Alignment:
Q  6 acttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagt 105  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||  ||||||||||||||| |||||    
T  9770258 acttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattttgtctattttaggattctactatggatttgagtcgttgaaggtgaaaaaagt 9770159  T
Q  106 cgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    | | |||| ||  ||||||  ||||||||||  ||||||||||||    
T  9770158 cacaaaatcctagattttagaatttaagtcgagattttaacaaca 9770114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17466230 - 17466081
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| |||||||| |||||| |||||||||  ||| || ||| |||||    
T  17466230 aaatgacttagtttattagaaatcgtaaaatcgcaatctaaatcgatggattttgcttattttaggattctattatggatttgagtccttaaagatgaag 17466131  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||| |||| |||| || ||||||||||||||||| |||||||| ||||||    
T  17466130 aaaatcgcaaaatcctaaattttaagatttaagttggaattttgacaaca 17466081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 13551600 - 13551749
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||  ||||||| |||||||||  |||||||||||||||     
T  13551600 aaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtgaaa 13551699  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| || ||||||| ||| |||||||  ||||| ||||||    
T  13551700 aaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaaca 13551749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 5375815 - 5375666
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||| ||||||| |||| ||||  ||||||||||||||||    
T  5375815 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctattttaaaattctattatgaattttagtcgttgaaggtgaag 5375716  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| ||||  | |||||||  ||||| || || ||||| ||||||    
T  5375715 aaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 8889375 - 8889237
Alignment:
Q  5 gacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaag 104  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||| | |||||| |||| ||||  |||||||| ||||||||||     
T  8889375 gacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgggattctattatgaatttgagtcgttgatggtgaagaaat 8889276  T
Q  105 tcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    || | |||| ||| |||||| |||||||||||| |||||    
T  8889275 tcacaaaatcctggattttaggatttaagtcgggatttt 8889237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 10143050 - 10142901
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||  ||||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||| ||||||||| ||  ||| ||||||||| ||    
T  10143050 aaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttggaattatactatggacttgagtcattgaaggtggag 10142951  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| ||||  | |||||||  ||||||||||| ||||| ||||||    
T  10142950 aaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaaca 10142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 23064949 - 23065090
Alignment:
Q  9 tagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgc 108  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||  |||||||||||||||||| ||||||||  ||||||||| |||||||||||  |    
T  23064949 tagtttataagaaatcgtaaaattgcaattaaaatcgatggatttgacctattttagaattctacaatggatttgagtcgttgaatgtgaagaaagttac 23065048  T
Q  109 gaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
     |||| ||| ||||||  |||||||||||  |||||||||||    
T  23065049 aaaatactggattttagaatttaagtcggggttttaacaaca 23065090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 8011212 - 8011343
Alignment:
Q  19 gaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctga 118  Q
    ||||||| ||||||||||||||||| |||| |||||||  ||||| | ||||||||||||||||  |||||||||||||||||||||||| |||| ||||    
T  8011212 gaaatcgcaaaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 8011311  T
Q  119 attttaagatttaagtcggaattttaacaaca 150  Q
    |||||| ||||| ||| || ||||| ||||||    
T  8011312 attttaggatttgagttgggattttgacaaca 8011343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 13023721 - 13023569
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgccta--ttttagaattctactatggatttaggtcgttgaaggtga 98  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||| ||||||  |||  |||| | ||||||||||||||||  ||| ||||||||||    
T  13023721 aaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttgggattctactatggatttgagtcattgaaggtga 13023622  T
Q  99 agaaagtcgcgaaattctgaa-ttttaagatttaagtcggaattttaacaaca 150  Q
    |||||||||| |||| || || ||||| ||||||||| || ||||| ||||||    
T  13023621 agaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaaca 13023569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 37240408 - 37240264
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||| |  |||||||||||||||  |||||||||||||||     
T  37240408 aaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattatgcctatttt-gggttctactatggatttgagtcgttgaaggtgaaa 37240310  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||  |    || ||||||| ||||||||| || ||||||||||||    
T  37240309 aaagtcgtaa----ctaaattttaggatttaagtagggattttaacaaca 37240264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 7044831 - 7044729
Alignment:
Q  48 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 147  Q
    ||||||||| |||||| | ||||| ||||||||||  ||||||||||||||| ||||| || ||||  || |||||| |||||||||||| ||||| |||    
T  7044831 ggattttgcttattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgaca 7044732  T
Q  148 aca 150  Q
    |||    
T  7044731 aca 7044729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 7452523 - 7452422
Alignment:
Q  48 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 147  Q
    ||||||||||||| |||| | || |||||||||| || |||||||||||||| ||||| || |||||||| ||||||  ||||||||||| ||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggattgag-tcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  148 aca 150  Q
    |||    
T  7452424 aca 7452422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 18459733 - 18459835
Alignment:
Q  48 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 147  Q
    |||||||||||||||||| ||||| ||||||||||  ||||||||| ||||| | |||||| ||||  || |||||| ||||| |||||| ||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  148 aca 150  Q
    |||    
T  18459833 aca 18459835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 4156866 - 4156765
Alignment:
Q  49 gattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 148  Q
    |||||||| |||||||| |||||||||  |||||  |||||| |||||||| ||||||   |||| || |||||||||||||||||||| ||||| ||||    
T  4156866 gattttgcttattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaa 4156767  T
Q  149 ca 150  Q
    ||    
T  4156766 ca 4156765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 148
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  48 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 147  Q
    |||||||||||||||| | |||||||||||| |||  |||| | ||| |||| |||||| | |||| ||| |||||| |||||||||||| |||||||||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  148 a 148  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 46664421 - 46664477
Alignment:
Q  87 cgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||||| | ||||||    
T  46664421 cgttgaagatgaacaaagtcgcaaaattctgaattttaagatttaagttgaaatttt 46664477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 24719610 - 24719519
Alignment:
Q  59 attttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||||| ||||| ||||||||||  ||||||||||||||| |||||||| ||||  |||||||||  | ||||||||  ||||| ||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaaca 24719519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 54
Target Start/End: Complemental strand, 4157090 - 4157053
Alignment:
Q  17 aagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  4157090 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 10394614 - 10394565
Alignment:
Q  48 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtg 97  Q
    |||| |||||||||||| |||||||||||| ||||| |||||||||||||    
T  10394614 ggatcttgcctattttaaaattctactatgaatttaagtcgttgaaggtg 10394565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 10143141 - 10143101
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  10143141 tataagagattgtaaaatcgcaatcaaaattgatggatttt 10143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 6346843 - 6346882
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattt 53  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  6346843 tataagaaattgtaaaatcgcaatcaaaatcgatggattt 6346882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 148
Target Start/End: Original strand, 6347114 - 6347189
Alignment:
Q  73 ctatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 148  Q
    ||||||||||  |||||||||||| || ||||| || |||| ||| |||||| ||||||||| |||||||| ||||    
T  6347114 ctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgacaa 6347189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 24719816 - 24719782
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatg 48  Q
    |||||||||||||||||||||||||||||| ||||    
T  24719816 tataagaaatcgtaaaatcgcaatcaaaatcgatg 24719782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 7045004 - 7044964
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||||  |||||||||| ||||||||||    
T  7045004 tataagaaatcgtaaaatatcaatcaaaatcgatggatttt 7044964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 8011024 - 8011064
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||| ||||||||||||||||||| |||| |||||    
T  8011024 tataagaaattgtaaaatcgcaatcaaaatcgatgtatttt 8011064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 9911299 - 9911335
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatgga 50  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  9911299 tataagaaattgtaaaatcgcaatcaaaatcgatgga 9911335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 17466320 - 17466280
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||| ||||||| ||||||||||| ||||||||||    
T  17466320 tataagaaattgtaaaattgcaatcaaaatcgatggatttt 17466280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 36121064 - 36121024
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  36121064 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 36121024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 98; Significance: 2e-48; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15294821 - 15294672
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||  |||||||||||||||     
T  15294821 aaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaa 15294722  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||||| ||||| ||||||    
T  15294721 aaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15475190 - 15475041
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||| |||||  |||||||||||||||     
T  15475190 aaatgacttagtttataagaaattgtaaaatcgcaatcaaaatcgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaa 15475091  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||||| ||||| ||||||    
T  15475090 aaagtcgcaaaatcctgaattttaggatttaagtcgggatttttacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 20 - 148
Target Start/End: Original strand, 3094250 - 3094378
Alignment:
Q  20 aaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaa 119  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| || |||| |||||    
T  3094250 aaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaa 3094349  T
Q  120 ttttaagatttaagtcggaattttaacaa 148  Q
    ||||||||||||||||| |||||| ||||    
T  3094350 ttttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11879751 - 11879602
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| |||||||||| |||||  ||||||||| ||||||    
T  11879751 aaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaag 11879652  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||| || |||| |||||||||| |||||||||| ||||||| ||||||    
T  11879651 aaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaaca 11879602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 11897167 - 11897018
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||| |||||||||| |||||  ||||||||| ||||||    
T  11897167 aaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaagtgaag 11897068  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||| || |||| |||||||||| |||||||||| ||||||| ||||||    
T  11897067 aaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaaca 11897018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 19704433 - 19704583
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||||||  ||||||||||||||||    
T  19704433 aaataacttggtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaag 19704532  T
Q  101 aaagtcgcgaaattc-tgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||  | ||||||||||||||||||| || ||||| ||||||    
T  19704533 aaagtcgcaaaaaccttgaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 5922200 - 5922051
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||| || |||||||||||||| ||||||||||||||||| ||||||||||| ||||||| | |||||||||||||| || ||||||||||||||||    
T  5922200 aaatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatataagtcgttgaaggtgaag 5922101  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||| | |||| ||| |||||| |||||||||||| ||||| ||||||    
T  5922100 aaagtcacaaaatcctggattttaggatttaagtcgggattttgacaaca 5922051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 17647144 - 17646995
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||  |||||||||||||||| ||||  |||||||||| |||| ||||| |||||||| | ||||||||||| ||||  ||||||||||||||||    
T  17647144 aaatgactaggtttataagaaatcgttaaataacaatcaaaatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaaggtgaag 17647045  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||||||||||| ||||||    
T  17647044 aaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaaca 17646995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 27836442 - 27836591
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||  || ||||||||||||     
T  27836442 aaatgacttagtttataagaaattgtaaaattgtaatcaaaattgatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaat 27836541  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||  ||| |||| |||||||||| ||| |||||  ||||||| ||||||    
T  27836542 aaaaccgcaaaatcctgaattttaggatctaagtttgaattttgacaaca 27836591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6810972 - 6810861
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  6810972 aaatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgatg-attttgcctattttaaaattctactatggatttgagtcgttgaaggtgaag 6810874  T
Q  101 aaagtcgcgaaat 113  Q
    |||||||| ||||    
T  6810873 aaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 148
Target Start/End: Complemental strand, 31424310 - 31424167
Alignment:
Q  5 gacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaag 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| | ||||| ||||||||||  ||||||||| | ||||||||    
T  31424310 gacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttgggattcttctatggatttgagtcgttgaaagggaagaaag 31424211  T
Q  105 tcgcgaaattctgaattttaagatttaagtcggaattttaacaa 148  Q
    |||  |||| ||||||||||  ||||||||| | ||||| ||||    
T  31424210 tcgtaaaatcctgaattttagaatttaagtcaggattttgacaa 31424167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 23142326 - 23142224
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||  |||||||||| |||||    
T  23142326 aaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaggattctactatggatttcagtcgttgaagttgaag 23142227  T
Q  101 aaa 103  Q
    |||    
T  23142226 aaa 23142224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 22910180 - 22910316
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| ||||| ||||||||||||| ||||||||||||||||||  |||||||||||||||||||  |||||||||| |||||  ||||||||| ||||||    
T  22910180 aaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaagattctactatagatttgagtcgttgaatgtgaag 22910279  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcgg 137  Q
    |||||||  |||| || ||||||| ||||||||||||    
T  22910280 aaagtcgtaaaatcctaaattttaggatttaagtcgg 22910316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 45403180 - 45403031
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||   ||||| ||||||||||| |||||||||||| |||    
T  45403180 aaatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaag 45403081  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| ||||  || ||||||  ||||||||||  ||||| ||||||    
T  45403080 aaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaaca 45403031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 29384306 - 29384406
Alignment:
Q  12 tttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaa 111  Q
    |||||||||||||||||||||||||||||| | |||| |||||||||||||| | ||| ||||||||||||  |||||||||||||||||||||||| ||    
T  29384306 tttataagaaatcgtaaaatcgcaatcaaa-tcgatgaattttgcctatttttggattatactatggatttgagtcgttgaaggtgaagaaagtcgcaaa 29384404  T
Q  112 at 113  Q
    ||    
T  29384405 at 29384406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 6292320 - 6292467
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||| |||||| |||| |||| | |||||||||||| | || ||||| | |||||||||||| |||||||| |||  |||||| ||| ||||     
T  6292320 aaatgacttagattataataaattgtaagaccgcaatcaaaatcgttgaatttttcttattttagaattatactatgggtttgagtcgttaaagatgaaa 6292419  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 148  Q
    |||||| | ||||  | |||||||||||||||||||| ||||||||||    
T  6292420 aaagtcacaaaatcttaaattttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 7489261 - 7489393
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctat----tttagaattctactatggatttaggtcgttgaaggt 96  Q
    |||||||||| ||||||||||||| |||||| ||||||||||| |||  |||||| ||||    ||||||||||||||| ||||||  ||||||||||||    
T  7489261 aaatgacttaatttataagaaatcataaaattgcaatcaaaatcgataaattttgtctattttatttagaattctactacggattttagtcgttgaaggt 7489360  T
Q  97 gaagaaagtcgcgaaattctgaattttaagatttaa 132  Q
    |||||||   || |||||||| |||||| |||||||    
T  7489361 gaagaaa---gcaaaattctgtattttacgatttaa 7489393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9212233 - 9212296
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 64  Q
    |||||| ||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||    
T  9212233 aaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttta 9212296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 32424483 - 32424402
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggattt 82  Q
    |||||||||||| ||||| ||||||||||||||||||||||||  ||  |||||| ||||||||| ||||||||||| ||||    
T  32424483 aaatgacttagtatataataaatcgtaaaatcgcaatcaaaatctataaattttgtctattttaggattctactatgaattt 32424402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 15231862 - 15231774
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaa 102  Q
    ||||| |||| |||||||||||||||||  || ||||||||||||||||||  ||| || |||| ||||  ||||||||||||||||||    
T  15231862 tataaaaaattgtaaaatcgcaatcaaatatgttggattttgcctattttaagattttagtatgaatttcagtcgttgaaggtgaagaa 15231774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 29384200 - 29384240
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  29384200 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 29384240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 477101 - 477174
Alignment:
Q  77 ggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||||| ||| |||||||||||||||||| | |||| ||| |||||| |||||||||| | ||||| ||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaaca 477174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 17647238 - 17647198
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  17647238 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 17647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 26879810 - 26879778
Alignment:
Q  20 aaatcgtaaaatcgcaatcaaaattgatggatt 52  Q
    |||||||||||||||||||||||||||||||||    
T  26879810 aaatcgtaaaatcgcaatcaaaattgatggatt 26879778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 30240264 - 30240296
Alignment:
Q  20 aaatcgtaaaatcgcaatcaaaattgatggatt 52  Q
    |||||||||||||||||||||||||||||||||    
T  30240264 aaatcgtaaaatcgcaatcaaaattgatggatt 30240296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 26574948 - 26574985
Alignment:
Q  22 atcgtaaaatcgcaatcaaaattgatggattttgccta 59  Q
    ||||||||||||||||||||||||| ||||||| ||||    
T  26574948 atcgtaaaatcgcaatcaaaattgaaggattttaccta 26574985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 15761246 - 15761286
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||| | ||||||||||||||||||| ||||||||||    
T  15761246 tataagaagtagtaaaatcgcaatcaaaatcgatggatttt 15761286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 23142415 - 23142379
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatgga 50  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  23142415 tataagaaattgtaaaatcgcaatcaaaatcgatgga 23142379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 2e-48; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 29067435 - 29067286
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| | ||||||||||||||||  ||||||||||||||||    
T  29067435 aaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcgttgaaggtgaag 29067336  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||||||||||  ||||||||||| ||||| ||||||    
T  29067335 aaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaaca 29067286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 20756190 - 20756041
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||  ||||||||||||||||  ||| ||||||||||||    
T  20756190 aaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtgaag 20756091  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||| |||| |||| ||||||||||  ||||||||||| ||||| ||||||    
T  20756090 aaaatcgcaaaatcctgaattttataatttaagtcgggattttgacaaca 20756041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 17064472 - 17064330
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||| |||   |||||||||||||||     
T  17064472 aaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgttgaaggtgaac 17064373  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    | | |||| |||| ||||||||||||||||||||||| |||||    
T  17064372 acaatcgcaaaatcctgaattttaagatttaagtcgggatttt 17064330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 3449270 - 3449418
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||| |||||||||||||||||||||||||| |||||  |||||||||||||||||||| |||||||||| |||||  | |||||||||| |||    
T  3449270 aaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaaggtaaag 3449368  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||||| ||||| ||||||    
T  3449369 aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaaca 3449418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 39428053 - 39427905
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||| | |||||||||| |||||  ||||||||| ||||||    
T  39428053 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacgtgaag 39427954  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaac 149  Q
    ||||| || |||| | | ||||||| |||||| |||| ||||| |||||    
T  39427953 aaagttgcaaaatccaggattttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 28745909 - 28745772
Alignment:
Q  13 ttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaa 112  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||||   ||||||||||| ||||  |||||||||||||||||||||||| |||    
T  28745909 ttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatgaatttgagtcgttgaaggtgaagaaagtcgcaaaa 28745810  T
Q  113 ttctgaattttaagatttaagtcggaattttaacaaca 150  Q
    | || ||||||| ||||||| |||| ||||| ||||||    
T  28745809 tcctaaattttaggatttaaatcgggattttgacaaca 28745772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 21963579 - 21963436
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||  ||||||||||| |||||||| |||||||| |||||||||||| |||||||| ||| ||||||||||||  |||||| |||||||||    
T  21963579 aaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaag 21963481  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaa 145  Q
    |||||||  ||||  ||||||||| |||||||||||| |||||||    
T  21963480 aaagtcgtaaaatcttgaattttaggatttaagtcgggattttaa 21963436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 21986015 - 21985872
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||  ||||||||||| |||||||| |||||||| |||||||||||| |||||||| ||| ||||||||||||  |||||| |||||||||    
T  21986015 aaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaag 21985917  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaa 145  Q
    |||||||  ||||  ||||||||| |||||||||||| |||||||    
T  21985916 aaagtcgtaaaatcttgaattttaggatttaagtcgggattttaa 21985872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 22356030 - 22356173
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtg-aa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||| ||| |  | ||||||| || ||    
T  22356030 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctgaaa 22356129  T
Q  100 gaaagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
     ||| ||   |||| |||||||||| ||||||||||||||||||    
T  22356130 aaaaatcttaaaatcctgaattttaggatttaagtcggaatttt 22356173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 8156108 - 8156258
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcct-attttagaattctactatggatttaggtcgttgaaggtgaa 99  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| | ||| ||||||||||||  ||| |||||||||||    
T  8156108 aaataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattttgggattatactatggatttgagtcattgaaggtgaa 8156207  T
Q  100 gaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
     ||| |||  |||||||||||||||  |||||||| || ||||| ||||||    
T  8156208 aaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaaca 8156258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 24620178 - 24620330
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||||||||||||   |||||||| || ||||  ||||||||||||||||    
T  24620178 aaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgagattctactgtgaatttgagtcgttgaaggtgaag 24620277  T
Q  101 aaagtcg---cgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||   | ||||  | ||||||| |||||||||||||||||| ||||||    
T  24620278 aaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaaca 24620330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 30727694 - 30727803
Alignment:
Q  26 taaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 125  Q
    |||||||||||||||||| |||| |||||| ||||||| | |||||||||| |||||  |||||||||||||||||||||||  |||||| | |||||||    
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  126 gatttaagtc 135  Q
    ||||||||||    
T  30727794 gatttaagtc 30727803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 42696998 - 42696920
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatgga 79  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||   |||||||||||||    
T  42696998 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 22137428 - 22137280
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||  ||||||||||| ||||||||||| ||||| |||||||||||| |||||| | ||| ||||||||||||  | |||| |||||||||    
T  22137428 aaatgacttagtaaataagaaatcg-aaaatcgcaattaaaatcgatggattttgcatattttgggattttactatggatttgaggcgttcaaggtgaag 22137330  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||  | ||  ||||||||| |||||||||| | ||||||| ||||    
T  22137329 aaagtcgtaacatcttgaattttaggatttaagtcaggattttaaaaaca 22137280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 24649684 - 24649816
Alignment:
Q  19 gaaatcgtaaaatcgcaatcaaaattgatggattttgcct-attttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctg 117  Q
    |||||||||||||| || |||||||||||| ||||||| | ||||| ||||||||||||||||||  |||||||||||||||| |||||   |||| ||     
T  24649684 gaaatcgtaaaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatccta 24649783  T
Q  118 aattttaagatttaagtcggaattttaacaaca 150  Q
     |||||| |||||||||||| ||||| ||||||    
T  24649784 gattttacgatttaagtcgggattttgacaaca 24649816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 22 - 113
Target Start/End: Original strand, 22494780 - 22494871
Alignment:
Q  22 atcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaat 113  Q
    |||||||||||||||||||||| |||| ||||||  |||||||| ||||||||||| ||||  ||||||||||||||| |||||||| ||||    
T  22494780 atcgtaaaatcgcaatcaaaatcgatgaattttgtttattttaggattctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaat 22494871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 28135824 - 28135724
Alignment:
Q  50 attttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaac 149  Q
    ||||||||||||| |||||| | ||||||||||  |||  |||| ||||| |||||||| |||| |||||||||| ||||||| |||||||||| |||||    
T  28135824 attttgcctatttgagaattttgctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaac 28135725  T
Q  150 a 150  Q
    |    
T  28135724 a 28135724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 15806531 - 15806621
Alignment:
Q  48 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcgga 138  Q
    ||||||||||| |||| | ||||| ||||||||||  ||| ||||||||||| |||||||| |||||||| ||| || |||||||||||||    
T  15806531 ggattttgcctgttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtcgga 15806621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 25870350 - 25870503
Alignment:
Q  6 acttagtttataagaaatcgtaaaatcgcaatcaaaatt-----gatggattttgcctattttagaattctactatggatt----taggtcgttgaaggt 96  Q
    ||||| ||||||||||||||||||||||||||||||||      |||||||||||||||||||    |||||||| | |||    | | ||||||||| |    
T  25870350 acttaatttataagaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagat 25870449  T
Q  97 gaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||||| | ||||  || |||||| |||||||||||  ||||| ||||||    
T  25870450 gaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaaca 25870503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 17796477 - 17796379
Alignment:
Q  52 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||| ||||||||| ||||| ||||| ||||  || ||||||| |||| |||||||  |||| ||  |||||| |||||||||||||||||| ||||||    
T  17796477 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaaca 17796379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 17796586 - 17796488
Alignment:
Q  52 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||| ||||||||| ||||| ||||| ||||| || |||||||||||| |||||||  |||| ||  |||||| ||||||| ||| |||||| ||||||    
T  17796586 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaaca 17796488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 19104917 - 19104819
Alignment:
Q  52 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||| ||||||||| ||||| ||||| ||||  || ||||||| |||| |||||||  |||| ||  |||||| |||||||||||||||||| ||||||    
T  19104917 tttgtctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaaca 19104819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 150
Target Start/End: Complemental strand, 19105026 - 19104928
Alignment:
Q  52 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||| ||||||||| ||||| ||||| ||||| || |||||||||||| |||||||  |||| ||  |||||| ||||||| ||| |||||| ||||||    
T  19105026 tttgtctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaaca 19104928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 3449198 - 3449238
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  3449198 tataagaaaatgtaaaatcgcaatcaaaattgatggatttt 3449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 6136457 - 6136497
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  6136457 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 17796368 - 17796272
Alignment:
Q  52 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 148  Q
    |||| ||||||||| ||||| ||||| ||||  || |||||||||||| |||||| | |||| ||  |||||| ||||||||| |||||||| ||||    
T  17796368 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 17796272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 17796807 - 17796771
Alignment:
Q  15 ataagaaatcgtaaaatcgcaatcaaaattgatggat 51  Q
    ||||||||||||||||||| |||||||||||||||||    
T  17796807 ataagaaatcgtaaaatcgaaatcaaaattgatggat 17796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 19104808 - 19104712
Alignment:
Q  52 tttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 148  Q
    |||| ||||||||| ||||| ||||| ||||  || |||||||||||| |||||| | |||| ||  |||||| ||||||||| |||||||| ||||    
T  19104808 tttgtctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaa 19104712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 19105247 - 19105211
Alignment:
Q  15 ataagaaatcgtaaaatcgcaatcaaaattgatggat 51  Q
    ||||||||||||||||||| |||||||||||||||||    
T  19105247 ataagaaatcgtaaaatcgaaatcaaaattgatggat 19105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 25870210 - 25870250
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||| ||||||||||||||||||| ||||||||||    
T  25870210 tataagaaattgtaaaatcgcaatcaaaatcgatggatttt 25870250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15515234 - 15515297
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 64  Q
    |||||||||||||||||||||||||| |||||| | | ||||| || | ||||| |||||||||    
T  15515234 aaatgacttagtttataagaaatcgtgaaatcgaagttaaaatcgacgaatttttcctatttta 15515297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 10872603 - 10872643
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||||||||||||  ||| ||||||||||||||||    
T  10872603 tataagaaatcgtaaaatcagaataaaaattgatggatttt 10872643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 13286185 - 13286145
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||||| |||| ||||| ||||||||||    
T  13286185 tataagaaatcgtaaaatcacaatgaaaatcgatggatttt 13286145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 17064548 - 17064508
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||| ||||||| ||||||||||| ||||||||||    
T  17064548 tataagaaattgtaaaattgcaatcaaaatcgatggatttt 17064508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 20756263 - 20756223
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  20756263 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 20756223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 21963672 - 21963632
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  21963672 tataagaaatcgtaaaaccagaatcaaaattgatggatttt 21963632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 21986108 - 21986068
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  21986108 tataagaaatcgtaaaaccagaatcaaaattgatggatttt 21986068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 22137518 - 22137478
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||| |  ||||||||||||||||||||    
T  22137518 tataagaaatcgtaaaaccaaaatcaaaattgatggatttt 22137478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 27676677 - 27676637
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||||||||||| ||||||||||  |||||||||    
T  27676677 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 27676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 28746017 - 28745977
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  28746017 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 28745977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 39428144 - 39428104
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  39428144 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 39428104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 42697089 - 42697049
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||| |||| ||||||||||||| ||||||||||    
T  42697089 tataagaaatcataaactcgcaatcaaaatcgatggatttt 42697049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 13276244 - 13276393
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  13276244 aaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttaggattctactatggatttaggtcgttgaagatgaag 13276343  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||  |||||| ||||||| |||| ||||| ||||||    
T  13276344 aaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaaca 13276393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 19009924 - 19010073
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||| |||||||||||     
T  19009924 aaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttactatggatttaagtcattgaaggtgaaa 19010023  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||| |||||||||| | ||||| ||||||    
T  19010024 aaagtcgcaaaatcctgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 23528807 - 23528658
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||  |||||||||| |||||    
T  23528807 aaatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagattttgcctattttaggattctactatggatttgagtcgttgaagatgaag 23528708  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||||||||||||| || ||||| ||||||    
T  23528707 aaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaaca 23528658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9955013 - 9955162
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||||  |||||||| ||||||||||||||||    
T  9955013 aaatgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgggattctacattggatttaagtcgttgaaggtgaag 9955112  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| || ||||||| ||||||||| || ||||| ||||||    
T  9955113 aaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaaca 9955162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16125433 - 16125570
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtg--- 97  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||  ||| |||||||||||||||||||||||||||       
T  16125433 aaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaaa 16125532  T
Q  98 aagaaagtcgcgaaattctgaattttaagatttaagtc 135  Q
    ||||||||||| |||| |||||||||| ||||||||||    
T  16125533 aagaaagtcgcaaaatcctgaattttaggatttaagtc 16125570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9327193 - 9327342
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| |||||| |||||  ||||||||||||| ||    
T  9327193 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttgggattttactatagatttgagtcgttgaaggtgtag 9327292  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||  || ||||||| |||||||||| | ||||||||||||    
T  9327293 aaagtcgcaaaaccctaaattttaggatttaagtcaggattttaacaaca 9327342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 41032661 - 41032797
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaat 113  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||| ||||    
T  41032661 tataagaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaat 41032760  T
Q  114 tctgaattttaagatttaagtcggaattttaacaaca 150  Q
     ||||||| || |||||||||||  ||||| ||||||    
T  41032761 cctgaattctacgatttaagtcgagattttgacaaca 41032797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 12513432 - 12513283
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||  ||| ||||||||||||  |||||||||| |||||    
T  12513432 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttactatggatttgagtcgttgaagctgaag 12513333  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||  ||| || |||||||||||| ||||| ||||||    
T  12513332 aaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 25146747 - 25146895
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||| | |||| ||||||| | ||||||||||| ||||  ||||||||||||||||    
T  25146747 aaataacttagtttataagaaatcgtaaa-tcgcaattaaaattgatgtactttgtctattttgggattctactatgaatttgagtcgttgaaggtgaag 25146845  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| ||||||||||||||| |||||||||| | ||||| ||||||    
T  25146846 aaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaaca 25146895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 42180043 - 42180192
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||| |||| |||||||||| |||| ||||||||||||||  |||||||||||||||||   |||||||||| ||||    
T  42180043 aaatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaaggggaag 42180142  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||||||||||  |||||||| || ||||| ||||||    
T  42180143 aaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaaca 42180192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 13100342 - 13100195
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  13100342 aaatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgtgaag 13100243  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaa 148  Q
    |||||||  |||| ||  ||||||  |||||||| || ||||| ||||    
T  13100242 aaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaa 13100195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 18304789 - 18304938
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcg-ttgaaggtgaa 99  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||   ||||||||||| ||||  |||| |||||||||||    
T  18304789 aaatgacttagcttataagaaatcgtaaa-tcgcaatcaaaattgatggattttgtctattttgagattctactatgaatttgagtcgtttgaaggtgaa 18304887  T
Q  100 gaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||||||| |||| ||| |||||| ||||||||| || ||||| ||||||    
T  18304888 gaaagtcgcaaaatactggattttaggatttaagttgggattttgacaaca 18304938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9352041 - 9352190
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| || |||||||| ||||||| | | ||| |||| |||||  ||| ||||||||||||    
T  9352041 aaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattttgtctattttgggactctgctatagatttgagtctttgaaggtgaag 9352140  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||  ||| |||||| |||||||||||| ||||| ||||||    
T  9352141 aaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaaca 9352190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 17869732 - 17869872
Alignment:
Q  5 gacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaag 104  Q
    ||||||||||| ||||||||||||||| ||||||||||| || | |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  17869732 gacttagtttaaaagaaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggtgaagaaag 17869831  T
Q  105 tcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||| |||| |     ||||||||||||||| | ||||| ||||||    
T  17869832 tcgcaaaatcc-----tttaagatttaagtcaggattttgacaaca 17869872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 9128818 - 9128967
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||||||  ||||||||||  ||||  |||||| || ||||||    
T  9128818 aaataacttagtttataagaaatcgtcaaatcgcaatcaaaatcgatgaattttgtctattttaagattctactataaatttgagtcgttaaatgtgaag 9128917  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| | || || | ||||| |||||||||||  ||||||||||||    
T  9128918 aaagtcgcaagatcctaatttttaggatttaagtcgtgattttaacaaca 9128967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 21846271 - 21846395
Alignment:
Q  26 taaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 125  Q
    |||||||||||||||||| ||||||||||  |||||||   ||||||||||||||||  ||||||||||||||| |||||||| |||| ||| ||||||     
T  21846271 taaaatcgcaatcaaaatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctggattttag 21846370  T
Q  126 gatttaagtcggaattttaacaaca 150  Q
    ||||||| |||| ||||| ||||||    
T  21846371 gatttaactcgggattttgacaaca 21846395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 17055995 - 17056108
Alignment:
Q  19 gaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctga 118  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||| |  ||||||||||||| ||||| | || |||| |||     
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctgg 17056094  T
Q  119 attttaagatttaa 132  Q
    |||||| |||||||    
T  17056095 attttaggatttaa 17056108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 32881477 - 32881415
Alignment:
Q  2 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttta 64  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  32881477 aatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttta 32881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18228351 - 18228278
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctacta 75  Q
    |||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||| | |||||||||    
T  18228351 aaataacttaatttataagaaatcataaaatc-caatcaaaattgatggattttgcctattttgggattctacta 18228278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 34478833 - 34478897
Alignment:
Q  86 tcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||||||||||||||||||| | |||| |  |||||||||||||||||||| ||||||||||||    
T  34478833 tcgttgaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaaca 34478897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47786010 - 47785958
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattt 53  Q
    ||||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  47786010 aaatgacttagtttataagaaatcgtaaaattgcaatcaaaaccgatggattt 47785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 30619142 - 30619077
Alignment:
Q  85 gtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||||||||||||||||| |||| |||| ||| |||||| |||||||||||| ||||| ||||||    
T  30619142 gtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaaca 30619077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 18337547 - 18337648
Alignment:
Q  48 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 147  Q
    |||||||||||||||| |  |||| ||||||||||  ||||||||||||||| ||||| || |||| ||| ||||| || | |||||||| ||||| |||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggatttt-aggtataagtcgggattttgaca 18337645  T
Q  148 aca 150  Q
    |||    
T  18337646 aca 18337648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 14074404 - 14074497
Alignment:
Q  57 ctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||||||  |||||||| |||||||  |||||||||  ||||||||||||| |||| ||  |||||| |||||||| ||| ||||| ||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaaca 14074497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 13100431 - 13100391
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  13100431 tataagaaatcttaaaatcgcaatcaaaatcgatggatttt 13100391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 12800629 - 12800708
Alignment:
Q  71 tactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||| |||||  ||||||||| |||||||||||||  |||| || ||||||| ||||||||| || ||||| ||||||    
T  12800629 tactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaaca 12800708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 50
Target Start/End: Original strand, 16125343 - 16125379
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatgga 50  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  16125343 tataagaaattgtaaaatcgcaatcaaaatcgatgga 16125379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 18304699 - 18304739
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  18304699 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 18304739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 21846162 - 21846202
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||| ||||||||||||||||||| |||| |||||    
T  21846162 tataagaaattgtaaaatcgcaatcaaaatagatgaatttt 21846202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 23528897 - 23528857
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  23528897 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 23528857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 7433 - 7582
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| |||| ||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| |||||||||||||||| | ||||||||||| |||    
T  7433 aaattacttcgtttataagaaatcgtaaaatcgcaattaaaatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaag 7532  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||||||||||  ||||||||||| ||| ||||||||    
T  7533 aaagtcgcaaaatcctgaattttagaatttaagtcgggattctaacaaca 7582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 1e-43; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 31237955 - 31238104
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||  ||||||||||| ||||  ||||||||||||||||    
T  31237955 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaaggtgaag 31238054  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||||| || |||| ||  |||||| |||||||||||| ||||| ||||||    
T  31238055 aaagtggcaaaatcctagattttaggatttaagtcgggattttgacaaca 31238104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 1404934 - 1404785
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||| || ||||| ||||||| ||||||||| ||||||||||||||||    
T  1404934 aaatgacttagtatataagaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtgaag 1404835  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||| | |||| || |||||||  ||||||||||| ||||| ||||||    
T  1404834 aaagtcacaaaatcctaaattttagaatttaagtcgggattttgacaaca 1404785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 31578155 - 31578007
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||| ||||||||| |||||||  |||||||||||||||    
T  31578155 aaatgacttagtttataataaatcgtaaaattgcaatcaaaattgatggattttgcttattttaggattctacta-ggatttaaatcgttgaaggtgaag 31578057  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    ||| |||| ||||  | |||||||| ||||||||||| ||||| ||||||    
T  31578056 aaaatcgcaaaatcttaaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 35565932 - 35566081
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||| | ||||||| ||||||||  ||| |||||  |||||    
T  35565932 aaatgactttgtttataagaaatcgtaaaactgcaatcaaaatcgatggattttgcctattttgggattctaccatggatttgagtcattgaatatgaag 35566031  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| |||||||||  ||||||||| || ||||| ||||||    
T  35566032 aaagtcgcaaaatcctgaattttgtgatttaagttgggattttgacaaca 35566081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 30432570 - 30432464
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||   ||||||||||||||||  ||||||||||| ||||    
T  30432570 aaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatggatttgagtcgttgaaggcgaag 30432471  T
Q  101 aaagtcg 107  Q
    |||||||    
T  30432470 aaagtcg 30432464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 36429999 - 36429850
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||   ||||| ||||| | ||  ||||||||||||||||    
T  36429999 aaattacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttgagattctcctatgaacttgagtcgttgaaggtgaag 36429900  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| |||| ||  ||| || ||||||||| || ||||| ||||||    
T  36429899 aaagtcgcaaaatcctagattataggatttaagttgggattttgacaaca 36429850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 150
Target Start/End: Original strand, 23863321 - 23863448
Alignment:
Q  23 tcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattt 122  Q
    |||||||||||||| |||||| |||||||||||||||||||   ||||||||||||||||  ||||||||| |||||||||||||| |||||||  ||||    
T  23863321 tcgtaaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattt 23863420  T
Q  123 taagatttaagtcggaattttaacaaca 150  Q
    ||  ||||||||||| ||||| ||||||    
T  23863421 tagaatttaagtcgggattttgacaaca 23863448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 15588828 - 15588969
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    ||||||||||||||||| ||||||||||||||||||| ||||  ||| ||||||| |||||||   ||||||||||| ||||  || |||||||||||||    
T  15588828 aaatgacttagtttatatgaaatcgtaaaatcgcaataaaaaacgattgattttgtctattttgagattctactatgtatttgagttgttgaaggtgaag 15588927  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaatttt 143  Q
    |||| ||| |||| ||||||||||||| ||||||||| |||||    
T  15588928 aaagacgcaaaatcctgaattttaaga-ttaagtcgggatttt 15588969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 150
Target Start/End: Original strand, 25539222 - 25539353
Alignment:
Q  19 gaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattc-tg 117  Q
    |||||||| |||||||| ||||||| |||||||||||| |||||| | ||||| ||||||||||| ||||||||||||||||||| | || |||||| ||    
T  25539222 gaaatcgttaaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgc-aaattcttg 25539320  T
Q  118 aattttaagatttaagtcggaattttaacaaca 150  Q
    ||||||| ||||||| |||| ||||||||||||    
T  25539321 aattttaggatttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 20063865 - 20063716
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||| |||||| |||||||| |||||||||||||| ||||| |||| |||||||||||||| | ||||||||||||||||| ||| |||||| |||||    
T  20063865 aaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagtccttgaagatgaag 20063766  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||  ||| |||   || |||||| | |||||||||| ||||| ||||||    
T  20063765 aaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaaca 20063716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 1690785 - 1690889
Alignment:
Q  46 atggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaa 145  Q
    |||| ||||||||||||| | ||| |||||||||| |  ||||| |||||||||||||||| | |||| || ||||||||||||||||||||| |||| |    
T  1690785 atgggttttgcctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttga 1690884  T
Q  146 caaca 150  Q
    |||||    
T  1690885 caaca 1690889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 17995157 - 17995057
Alignment:
Q  50 attttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaac 149  Q
    |||||||||||||| ||||| | ||| | ||||  |||||||| |||||| ||| |||| |||||||| |||||| | ||||||||||||||||||||||    
T  17995157 attttgcctattttggaattatgctacgaatttgagtcgttgatggtgaataaaatcgcaaaattctggattttaggttttaagtcggaattttaacaac 17995058  T
Q  150 a 150  Q
    |    
T  17995057 a 17995057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 19491982 - 19491896
Alignment:
Q  26 taaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaat 113  Q
    |||||||||||||||||| |||||||||| |||||||| | ||||| ||||||||||  |||||| ||| ||||||||||||| ||||    
T  19491982 taaaatcgcaatcaaaatcgatggattttacctatttt-ggattctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaat 19491896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 1690710 - 1690768
Alignment:
Q  5 gacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctatttt 63  Q
    |||||||||||||||||||||||||||||||||||||||  |||| ||| |||||||||    
T  1690710 gacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgggtttcgcctatttt 1690768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 16766809 - 16766712
Alignment:
Q  53 ttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||| |||||||| ||||| ||||||||||   |||||||||||||| ||| |||  |||| || ||||||||||||||||||  |||||| ||||||    
T  16766809 ttgcttattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaaca 16766712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 13502561 - 13502601
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  13502561 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

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Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 27407032 - 27406993
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggattt 53  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  27407032 tataagaaatcataaaatcgcaatcaaaattgatggattt 27406993  T

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Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 31023325 - 31023262
Alignment:
Q  50 attttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaat 113  Q
    |||||||||||||||| ||||||||||| ||||  ||||||||| ||||| |||||||| ||||    
T  31023325 attttgcctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaat 31023262  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 150
Target Start/End: Original strand, 15516624 - 15516686
Alignment:
Q  88 gttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||||||| |||||||| |||| |||||| ||||||||||||| |  ||||||||||||    
T  15516624 gttgaaggtgaataaagtcgcaaaatgctgaatattaagatttaagttgcgattttaacaaca 15516686  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 136
Target Start/End: Original strand, 13503067 - 13503156
Alignment:
Q  48 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattct-gaattttaagatttaagtcg 136  Q
    |||||||||||||||||||||| |  |||||||||  | ||||||| ||||| ||  |||| |||| || || |||||||||||||||||    
T  13503067 ggattttgcctattttagaattttgttatggatttgagccgttgaaagtgaataagatcgcaaaatcctagatttttaagatttaagtcg 13503156  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 43
Target Start/End: Complemental strand, 16767026 - 16766997
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaat 43  Q
    ||||||||||||||||||||||||||||||    
T  16767026 tataagaaatcgtaaaatcgcaatcaaaat 16766997  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 15588742 - 15588782
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||  |||||||||||||||||| ||||||||||    
T  15588742 tataagaaattataaaatcgcaatcaaaatcgatggatttt 15588782  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 19519609 - 19519577
Alignment:
Q  20 aaatcgtaaaatcgcaatcaaaattgatggatt 52  Q
    |||||||||||||||||||||||||||| ||||    
T  19519609 aaatcgtaaaatcgcaatcaaaattgatagatt 19519577  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 30433056 - 30433016
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  30433056 tataggaaattgtaaaatcgcaatcaaaatagatggatttt 30433016  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 125
Target Start/End: Complemental strand, 34841659 - 34841583
Alignment:
Q  49 gattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaa 125  Q
    |||||||| | |||| | ||||| ||||||||||  ||||||||||||||| ||||||||  ||| || ||||||||    
T  34841659 gattttgcatgttttggtattctcctatggatttgagtcgttgaaggtgaataaagtcgcagaatcctaaattttaa 34841583  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 34841816 - 34841784
Alignment:
Q  20 aaatcgtaaaatcgcaatcaaaattgatggatt 52  Q
    |||||||||||||||||||||||| ||||||||    
T  34841816 aaatcgtaaaatcgcaatcaaaatcgatggatt 34841784  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 35565845 - 35565885
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  35565845 tataagaaatcataaaatcacaatcaaaatcgatggatttt 35565885  T

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Target: scaffold0186 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8594 - 8445
Alignment:
Q  1 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| | ||||||| || |||||| ||||||||||||||||    
T  8594 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaaggtgaag 8495  T
Q  101 aaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||| ||||  || |||||| ||||||||| || ||||| ||||||    
T  8494 aaagtcgcaaaatcgtggattttaggatttaagtagggattttgacaaca 8445  T

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Target: scaffold0186; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 8682 - 8642
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  8682 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 8642  T

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Target: scaffold0042 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 150
Target Start/End: Original strand, 93688 - 93831
Alignment:
Q  5 gacttagtttataagaaatcgtaaaatcgcaatcaaaattgatggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaag 104  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||  || ||||| ||||||||||     
T  93688 gacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattcttctatggatttgagttgttgagggtgaagaaaa 93787  T
Q  105 tcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |  | |||||||| |||||| |||||||||||| ||||| ||||||    
T  93788 t--caaaattctggattttaggatttaagtcgggattttgacaaca 93831  T

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Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 93593 - 93633
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  93593 tataataaatcgtaaaatcgcaatcaaaatcgatggatttt 93633  T

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Target: scaffold0510 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 91 - 228
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt-gcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaa 112  Q
    |||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||| ||||||||||||  ||||||||| |||||||||||||| |||    
T  91 tataagaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaa 190  T
Q  113 ttctgaattttaagatttaagtcggaattttaacaaca 150  Q
    | ||| |||||| |||||||||||| || ||| |||||    
T  191 tcctgcattttaggatttaagtcgggatcttatcaaca 228  T

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Target: scaffold0036 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 37191 - 37293
Alignment:
Q  48 ggattttgcctattttagaattctactatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaaca 147  Q
    ||||||| |||||||||  ||||| ||||||||||  || |||||||||||| ||| | || |||||||||||||||| ||||||||||| ||||| |||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  148 aca 150  Q
    |||    
T  37291 aca 37293  T

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Target: scaffold0048 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 150
Target Start/End: Original strand, 48839 - 48915
Alignment:
Q  74 tatggatttaggtcgttgaaggtgaagaaagtcgcgaaattctgaattttaagatttaagtcggaattttaacaaca 150  Q
    |||||||||  ||||||||||||||| ||||| || |||||||  |||||| |||||||||||||||||| ||||||    
T  48839 tatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaaca 48915  T

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Target: scaffold0603 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 8847 - 8887
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||||||| | ||||||||||||||||||| ||||||||||    
T  8847 tataagaacttgtaaaatcgcaatcaaaatcgatggatttt 8887  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 56313 - 56353
Alignment:
Q  14 tataagaaatcgtaaaatcgcaatcaaaattgatggatttt 54  Q
    |||| ||||| ||||||||||||||||||| ||||||||||    
T  56313 tataggaaattgtaaaatcgcaatcaaaatcgatggatttt 56353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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