View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5333-Insertion-1 (Length: 112)
Name: NF5333-Insertion-1
Description: NF5333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5333-Insertion-1 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 97; Significance: 4e-48; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 97; E-Value: 4e-48
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 43067315 - 43067419
Alignment:
| Q |
8 |
aaaacttggtccaagaatcactaggatcctagcataataaaggaccatgatcgtatcaacaaaaataatatgtgtggctcaaaatacatttatacatttt |
107 |
Q |
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| T |
43067315 |
aaaacttggtccaagaatcactaggatcctagcataataaaggaccatgatcgtatcaacaagaataatatgtgtggttcaaaatacatttatacatttt |
43067414 |
T |
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| Q |
108 |
gaagc |
112 |
Q |
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||||| |
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| T |
43067415 |
gaagc |
43067419 |
T |
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