View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5334_high_2 (Length: 494)

Name: NF5334_high_2
Description: NF5334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5334_high_2
NF5334_high_2
[»] chr8 (4 HSPs)
chr8 (23-179)||(25641709-25641865)
chr8 (25-126)||(6634420-6634526)
chr8 (417-475)||(25641421-25641479)
chr8 (258-328)||(25641568-25641639)
[»] chr2 (10 HSPs)
chr2 (25-179)||(31331325-31331480)
chr2 (25-179)||(31338046-31338201)
chr2 (25-178)||(30269814-30269967)
chr2 (417-475)||(31338431-31338489)
chr2 (23-79)||(44924226-44924282)
chr2 (417-475)||(31331702-31331760)
chr2 (258-328)||(31338271-31338342)
chr2 (258-328)||(31331542-31331613)
chr2 (417-475)||(30269533-30269591)
chr2 (282-328)||(30269680-30269726)
[»] chr7 (3 HSPs)
chr7 (24-179)||(4682324-4682479)
chr7 (60-129)||(26224718-26224787)
chr7 (41-129)||(26205109-26205198)
[»] chr4 (6 HSPs)
chr4 (24-178)||(8238977-8239131)
chr4 (24-160)||(53303225-53303362)
chr4 (417-475)||(8238708-8238766)
chr4 (417-475)||(53302942-53303000)
chr4 (261-328)||(53303089-53303157)
chr4 (282-328)||(8238855-8238901)
[»] chr3 (3 HSPs)
chr3 (25-170)||(7400890-7401019)
chr3 (417-475)||(7401242-7401300)
chr3 (261-328)||(7401085-7401153)
[»] chr5 (4 HSPs)
chr5 (25-126)||(7413836-7413937)
chr5 (25-126)||(5075263-5075364)
chr5 (82-142)||(37191192-37191252)
chr5 (25-70)||(37191392-37191437)


Alignment Details
Target: chr8 (Bit Score: 153; Significance: 7e-81; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 25641865 - 25641709
Alignment:
Q  23 cacactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgtta 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25641865 cacactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgtta 25641766  T
Q  123 cattagtgtcactctttttcggtggtgtttatatcaaaacacattcatatactactg 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25641765 cattagtgtcactctttttcggtggtgtttatatcaaaacacattcatattctactg 25641709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 6634526 - 6634420
Alignment:
Q  25 cactactacacatatgtgttttagtaacattcat----cttgcaacacttgtttaatag-ttactaatatagagatttttctaacattttttagtaagtg 119  Q
    ||||||||||| ||||||||||||||||||||||    ||||||||||||  ||||| | ||||||||||||||||||||||||||||||||| ||||||    
T  6634526 cactactacacttatgtgttttagtaacattcattcaccttgcaacacttacttaatgggttactaatatagagatttttctaacattttttaataagtg 6634427  T
Q  120 ttacatt 126  Q
    |||||||    
T  6634426 ttacatt 6634420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 475
Target Start/End: Complemental strand, 25641479 - 25641421
Alignment:
Q  417 attttatttgatttcgtctttgattctgtatacgaattcatctttctgtattcaatttc 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25641479 attttatttgaattcgtctttgattctgtatacgaattcatctttctgtattcaatttc 25641421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 328
Target Start/End: Complemental strand, 25641639 - 25641568
Alignment:
Q  258 gtcttcgagctaaccagaaacgta-gttcgaatatggccgcaaagctaaatgtgcgattacaatcacaggtg 328  Q
    ||||||||||||||||||| |  | ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  25641639 gtcttcgagctaaccagaagcaaacgttcgaacatggcctcaaagctaaatgtgcgattacaatcacaggtg 25641568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 2e-75; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 31331325 - 31331480
Alignment:
Q  25 cactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttc-taacattttttagtaagtgttac 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31331325 cactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttcttaacattttttagtaagtgttac 31331424  T
Q  124 attagtgtcactctttttcggtggtgtttatatcaaaacacattcatatactactg 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31331425 attagtgtcactctttttcggtggtgtttatatcaaaacacattcatattctactg 31331480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 31338046 - 31338201
Alignment:
Q  25 cactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttc-taacattttttagtaagtgttac 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31338046 cactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttcttaacattttttagtaagtgttac 31338145  T
Q  124 attagtgtcactctttttcggtggtgtttatatcaaaacacattcatatactactg 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31338146 attagtgtcactctttttcggtggtgtttatatcaaaacacattcatattctactg 31338201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 25 - 178
Target Start/End: Complemental strand, 30269967 - 30269814
Alignment:
Q  25 cactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgttaca 124  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||    
T  30269967 cactactacacatatgtgttttagtaacattcatattgcaacacttgtttaatagttactaatatagagattttactaacattttttaataagtgttgca 30269868  T
Q  125 ttagtgtcactctttttcggtggtgtttatatcaaaacacattcatatactact 178  Q
    |||||  |||||||||||||| |||||||||||||||||||||||||| |||||    
T  30269867 ttagtaacactctttttcggtagtgtttatatcaaaacacattcatattctact 30269814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 417 - 475
Target Start/End: Original strand, 31338431 - 31338489
Alignment:
Q  417 attttatttgatttcgtctttgattctgtatacgaattcatctttctgtattcaatttc 475  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31338431 attttatttgatttcgtctttgattctgtatacgaattcatctttctgtattcaatttc 31338489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 44924282 - 44924226
Alignment:
Q  23 cacactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatag 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44924282 cacactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatag 44924226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 475
Target Start/End: Original strand, 31331702 - 31331760
Alignment:
Q  417 attttatttgatttcgtctttgattctgtatacgaattcatctttctgtattcaatttc 475  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31331702 attttatttgaattcgtctttgattctgtatacgaattcatctttctgtattcaatttc 31331760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 31338271 - 31338342
Alignment:
Q  258 gtcttcgagctaaccagaaacgta-gttcgaatatggccgcaaagctaaatgtgcgattacaatcacaggtg 328  Q
    ||||||||||||||||||| |  | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  31338271 gtcttcgagctaaccagaagcaaacgttcgaacatggccgcaaagctaaatgtgcgattacaatcacaggtg 31338342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 328
Target Start/End: Original strand, 31331542 - 31331613
Alignment:
Q  258 gtcttcgagctaaccagaaacgta-gttcgaatatggccgcaaagctaaatgtgcgattacaatcacaggtg 328  Q
    ||||||||||||||||||| |  | ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  31331542 gtcttcgagctaaccagaagcaaacgttcgaacatggcctcaaagctaaatgtgcgattacaatcacaggtg 31331613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 475
Target Start/End: Complemental strand, 30269591 - 30269533
Alignment:
Q  417 attttatttgatttcgtctttgattctgtatacgaattcatctttctgtattcaatttc 475  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||    
T  30269591 attttatttgatttcgtcttcgattccgtatacgaattcatctttctgcattccatttc 30269533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 30269726 - 30269680
Alignment:
Q  282 gttcgaatatggccgcaaagctaaatgtgcgattacaatcacaggtg 328  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  30269726 gttcgaacatggccgcaaagctaaatgtgcgattccaatcacaggtg 30269680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 4e-73; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 4682324 - 4682479
Alignment:
Q  24 acactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgttac 123  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4682324 acactactacacatatgtgttttagtaacatttatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgttac 4682423  T
Q  124 attagtgtcactctttttcggtggtgtttatatcaaaacacattcatatactactg 179  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  4682424 attagtgtcactctttttcaatggtgtttatatcaaaacacattcatattctactg 4682479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 26224718 - 26224787
Alignment:
Q  60 ttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgttacattagt 129  Q
    |||||||| || ||| ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||    
T  26224718 ttgcaacatttattttatagttactaatataaagatttctctaacattttttaataagtgttacattagt 26224787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 41 - 129
Target Start/End: Original strand, 26205109 - 26205198
Alignment:
Q  41 tgttttagtaa-cattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgttacattagt 129  Q
    ||||||||||| |||||| ||||||||| ||  || ||||||||||||||  |||||| |||||||||||||| ||||| ||||||||||    
T  26205109 tgttttagtaaacattcaccttgcaacatttagtttatagttactaatatgaagatttctctaacattttttaataagtattacattagt 26205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 1e-60; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 24 - 178
Target Start/End: Complemental strand, 8239131 - 8238977
Alignment:
Q  24 acactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgttac 123  Q
    |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  8239131 acactagtacatatatatgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttaataagtgttgc 8239032  T
Q  124 attagtgtcactctttttcggtggtgtttatatcaaaacacattcatatactact 178  Q
    ||||||  |||||||||||||| |||||||||||||||||||||||||| |||||    
T  8239031 attagtaacactctttttcggtagtgtttatatcaaaacacattcatattctact 8238977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 53303362 - 53303225
Alignment:
Q  24 acactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaa-tagttactaatatagagatttttctaacattttttagtaagtgtta 122  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||     
T  53303362 acactactacacatatgtgttttagtaacatttatcttgcaacacttgtttaagtagttactaatatagagatttttctaacattttttaataagtgttg 53303263  T
Q  123 cattagtgtcactctttttcggtggtgtttatatcaaa 160  Q
    |||||||  |||||||||||||| ||||||||||||||    
T  53303262 cattagtaacactctttttcggtagtgtttatatcaaa 53303225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 475
Target Start/End: Complemental strand, 8238766 - 8238708
Alignment:
Q  417 attttatttgatttcgtctttgattctgtatacgaattcatctttctgtattcaatttc 475  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  8238766 attttatttgatttcgtcttcgattccgtatacgaattcatctttctgtattccatttc 8238708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 475
Target Start/End: Complemental strand, 53303000 - 53302942
Alignment:
Q  417 attttatttgatttcgtctttgattctgtatacgaattcatctttctgtattcaatttc 475  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  53303000 attttatttgatttcgtcttcgattccgtatacgaattcatctttctgtattccatttc 53302942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 53303157 - 53303089
Alignment:
Q  261 ttcgagctaaccagaaacgta-gttcgaatatggccgcaaagctaaatgtgcgattacaatcacaggtg 328  Q
    |||||||||||||||| |  | ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  53303157 ttcgagctaaccagaagcaaacgttcgaacatggccgcaaagctaaatgtgcgattccaatcacaggtg 53303089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 8238901 - 8238855
Alignment:
Q  282 gttcgaatatggccgcaaagctaaatgtgcgattacaatcacaggtg 328  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  8238901 gttcgaacatggccgcaaagctaaatgtgcgattccaatcacaggtg 8238855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 25 - 170
Target Start/End: Original strand, 7400890 - 7401019
Alignment:
Q  25 cactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgttaca 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                |||||||| ||    
T  7400890 cactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagattt----------------taagtgttgca 7400973  T
Q  125 ttagtgtcactctttttcggtggtgtttatatcaaaacacattcat 170  Q
    |||||  |||||||||||||| ||||||||||||||||||||||||    
T  7400974 ttagtaacactctttttcggtagtgtttatatcaaaacacattcat 7401019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 417 - 475
Target Start/End: Original strand, 7401242 - 7401300
Alignment:
Q  417 attttatttgatttcgtctttgattctgtatacgaattcatctttctgtattcaatttc 475  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7401242 attttatttgatttcgtctttgattctgtatacgaattcatctttctgtattcaatttc 7401300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 261 - 328
Target Start/End: Original strand, 7401085 - 7401153
Alignment:
Q  261 ttcgagctaaccagaaacgta-gttcgaatatggccgcaaagctaaatgtgcgattacaatcacaggtg 328  Q
    |||||||||||||||| |  | ||||||| |||||||||||||||||||||||||||||||||||||||    
T  7401085 ttcgagctaaccagaagcaaacgttcgaacatggccgcaaagctaaatgtgcgattacaatcacaggtg 7401153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 7413937 - 7413836
Alignment:
Q  25 cactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgttaca 124  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||||  ||||| |||| ||||||||| ||||||||||| ||||||| |||||||||||    
T  7413937 cactactacacttatgtgttttagtaacattcaccttacaacacttacttaatggttattaatatagaaatttttctaaccttttttaataagtgttaca 7413838  T
Q  125 tt 126  Q
    ||    
T  7413837 tt 7413836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 5075263 - 5075364
Alignment:
Q  25 cactactacacatatgtgttttagtaacattcatcttgcaacacttgtttaatagttactaatatagagatttttctaacattttttagtaagtgttaca 124  Q
    ||||| ||||| ||||||||||| ||||||||| ||||||||||||  ||||| ||||| |||||| |||||||||||||||||||||  ||||||||||    
T  5075263 cactattacacttatgtgttttaataacattcaccttgcaacacttacttaatggttaccaatataaagatttttctaacattttttaagaagtgttaca 5075362  T
Q  125 tt 126  Q
    ||    
T  5075363 tt 5075364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 37191252 - 37191192
Alignment:
Q  82 actaatatagagatttttctaacattttttagtaagtgttacattagtgtcactctttttc 142  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| ||  |||||||||||    
T  37191252 actaatatagagatttttttaacattttttaataagtgttacattggtaacactctttttc 37191192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 37191437 - 37191392
Alignment:
Q  25 cactactacacatatgtgttttagtaacattcatcttgcaacactt 70  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||||    
T  37191437 cactactacacttatgtgtttttgtaacattcaccttgcaacactt 37191392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University