View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5335_low_15 (Length: 321)
Name: NF5335_low_15
Description: NF5335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5335_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 45 - 301
Target Start/End: Complemental strand, 26274891 - 26274635
Alignment:
| Q |
45 |
aacttgttaatgtttattgcttcaattcataactgtaagactttatgaatacgaatgacattaagctatatataaaggtgtttaatttggacagaaatga |
144 |
Q |
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| T |
26274891 |
aacttgttaatgtttattgcttcaattcgtaactgtaagactttatgaatacgaatgacattaagctatatataaaggtgtttaatttggacagaaatga |
26274792 |
T |
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| Q |
145 |
ttaaataaaataatgcatttcaatttcaaagagtattcctaattacaaataattaannnnnnnngggaataacttcacggaaagtctcaccatccttcct |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
26274791 |
ttaaataaaataatgcatttcaatttcaaagagtattcctaattacaaataattaattttttttgggaataacttcacggaaagtctcaccatccttcct |
26274692 |
T |
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| Q |
245 |
tcttcttggattgcttccccgtctctctaggacacgcacattttatgatgctaactt |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26274691 |
tcttcttggattgcttccccgtctctctaggacacgcacattttatgatgctaactt |
26274635 |
T |
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