View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5335_low_21 (Length: 251)

Name: NF5335_low_21
Description: NF5335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5335_low_21
NF5335_low_21
[»] chr2 (50 HSPs)
chr2 (1-241)||(39819699-39819944)
chr2 (168-241)||(25455027-25455100)
chr2 (168-241)||(40570023-40570096)
chr2 (12-75)||(5322166-5322230)
chr2 (13-108)||(36030750-36030846)
chr2 (12-62)||(30523230-30523280)
chr2 (176-241)||(14832813-14832878)
chr2 (12-53)||(41100152-41100193)
chr2 (171-239)||(14403231-14403299)
chr2 (12-75)||(15555393-15555457)
chr2 (12-63)||(16519136-16519188)
chr2 (177-241)||(18713661-18713725)
chr2 (12-75)||(43572591-43572655)
chr2 (12-62)||(1364816-1364867)
chr2 (12-62)||(11515027-11515078)
chr2 (177-240)||(17542373-17542435)
chr2 (12-62)||(37194250-37194301)
chr2 (12-62)||(40211986-40212037)
chr2 (12-74)||(3737273-3737335)
chr2 (12-61)||(34757589-34757639)
chr2 (16-76)||(1408844-1408905)
chr2 (177-241)||(28311701-28311765)
chr2 (13-49)||(39750148-39750184)
chr2 (16-116)||(39913182-39913285)
chr2 (12-62)||(13018525-13018576)
chr2 (12-62)||(26905787-26905838)
chr2 (16-63)||(31584817-31584864)
chr2 (13-60)||(35550206-35550253)
chr2 (12-62)||(9087512-9087562)
chr2 (177-219)||(24499465-24499507)
chr2 (177-219)||(37233454-37233496)
chr2 (170-219)||(346342-346391)
chr2 (170-219)||(2521700-2521749)
chr2 (12-72)||(4003401-4003462)
chr2 (178-219)||(5770115-5770156)
chr2 (168-241)||(6571690-6571763)
chr2 (170-207)||(27357960-27357997)
chr2 (18-62)||(36642405-36642450)
chr2 (170-219)||(39995128-39995177)
chr2 (170-207)||(45409287-45409324)
chr2 (177-241)||(1988314-1988378)
chr2 (15-47)||(3254634-3254666)
chr2 (177-241)||(9733850-9733914)
chr2 (12-52)||(11522227-11522267)
chr2 (19-63)||(11949888-11949932)
chr2 (12-115)||(31082745-31082849)
chr2 (12-63)||(36870245-36870297)
chr2 (163-219)||(37851883-37851939)
chr2 (177-241)||(41750532-41750596)
chr2 (179-219)||(45694213-45694253)
[»] chr5 (31 HSPs)
chr5 (12-108)||(19389865-19389961)
chr5 (177-235)||(43346899-43346957)
chr5 (12-75)||(6491154-6491218)
chr5 (11-115)||(17668188-17668293)
chr5 (12-108)||(7398827-7398923)
chr5 (12-75)||(10843014-10843078)
chr5 (12-106)||(2561043-2561138)
chr5 (12-62)||(35683520-35683571)
chr5 (15-116)||(9684831-9684933)
chr5 (169-219)||(29543011-29543061)
chr5 (19-108)||(22103455-22103543)
chr5 (12-115)||(39649500-39649605)
chr5 (184-241)||(40275766-40275823)
chr5 (12-72)||(2164123-2164183)
chr5 (12-75)||(5772767-5772831)
chr5 (12-52)||(6373131-6373171)
chr5 (32-116)||(6491391-6491475)
chr5 (13-72)||(35708801-35708861)
chr5 (12-63)||(3925828-3925879)
chr5 (168-219)||(4765555-4765606)
chr5 (12-75)||(43496908-43496971)
chr5 (26-72)||(1978179-1978225)
chr5 (175-241)||(6091718-6091784)
chr5 (169-219)||(18412234-18412284)
chr5 (20-62)||(18675768-18675810)
chr5 (177-219)||(20962615-20962657)
chr5 (170-219)||(555703-555752)
chr5 (170-219)||(12970527-12970576)
chr5 (12-60)||(27351054-27351102)
chr5 (12-71)||(29709497-29709557)
chr5 (12-52)||(39428935-39428975)
[»] chr4 (45 HSPs)
chr4 (12-116)||(21081278-21081384)
chr4 (12-108)||(49936451-49936549)
chr4 (12-62)||(28175511-28175562)
chr4 (12-62)||(51974311-51974361)
chr4 (12-72)||(54205812-54205873)
chr4 (172-228)||(26165384-26165440)
chr4 (31-75)||(27485309-27485353)
chr4 (12-115)||(45971491-45971594)
chr4 (177-241)||(47670369-47670433)
chr4 (12-62)||(12708881-12708932)
chr4 (170-241)||(23686794-23686865)
chr4 (12-62)||(29114280-29114331)
chr4 (12-62)||(30198818-30198869)
chr4 (12-116)||(31428739-31428845)
chr4 (12-116)||(35959124-35959230)
chr4 (167-241)||(40435907-40435981)
chr4 (12-62)||(45899379-45899428)
chr4 (12-52)||(47063686-47063726)
chr4 (12-62)||(16318600-16318651)
chr4 (176-219)||(27942772-27942815)
chr4 (12-62)||(30307356-30307407)
chr4 (172-219)||(39498854-39498901)
chr4 (172-219)||(39502193-39502240)
chr4 (170-241)||(48879332-48879403)
chr4 (16-107)||(54723948-54724039)
chr4 (12-63)||(55813673-55813724)
chr4 (12-54)||(15498841-15498883)
chr4 (169-207)||(30415943-30415981)
chr4 (177-227)||(31937873-31937923)
chr4 (13-63)||(32866779-32866828)
chr4 (177-219)||(34049601-34049643)
chr4 (12-108)||(46176974-46177072)
chr4 (170-219)||(6279918-6279967)
chr4 (172-241)||(25932448-25932517)
chr4 (168-241)||(35999693-35999766)
chr4 (170-219)||(39835304-39835353)
chr4 (19-115)||(41709172-41709269)
chr4 (172-241)||(43723271-43723340)
chr4 (12-75)||(48417647-48417712)
chr4 (12-60)||(8827867-8827915)
chr4 (163-219)||(18094278-18094334)
chr4 (12-63)||(42650618-42650670)
chr4 (12-63)||(46669992-46670044)
chr4 (20-72)||(52636734-52636786)
chr4 (31-75)||(53013576-53013620)
[»] chr3 (48 HSPs)
chr3 (12-115)||(32858760-32858864)
chr3 (12-115)||(1132972-1133076)
chr3 (172-221)||(6831956-6832005)
chr3 (12-114)||(11500036-11500138)
chr3 (180-241)||(40584603-40584664)
chr3 (12-116)||(49855855-49855960)
chr3 (17-74)||(49860563-49860619)
chr3 (12-75)||(33944687-33944751)
chr3 (12-62)||(3537191-3537242)
chr3 (12-62)||(25754149-25754200)
chr3 (12-62)||(38639572-38639623)
chr3 (12-62)||(53664646-53664697)
chr3 (12-62)||(7435662-7435712)
chr3 (12-62)||(51686490-51686540)
chr3 (172-241)||(20297796-20297865)
chr3 (18-83)||(27197214-27197279)
chr3 (19-112)||(30995803-30995896)
chr3 (172-241)||(31435922-31435991)
chr3 (12-72)||(45570990-45571051)
chr3 (177-241)||(12930946-12931009)
chr3 (12-71)||(15499346-15499406)
chr3 (12-63)||(24588330-24588382)
chr3 (170-218)||(28770207-28770255)
chr3 (12-116)||(29623166-29623270)
chr3 (12-112)||(54089501-54089601)
chr3 (24-72)||(54917744-54917792)
chr3 (168-219)||(8476303-8476354)
chr3 (12-63)||(16883337-16883388)
chr3 (168-219)||(20414460-20414511)
chr3 (12-62)||(33908996-33909047)
chr3 (12-62)||(50948189-50948240)
chr3 (169-219)||(24574600-24574650)
chr3 (177-219)||(47114861-47114903)
chr3 (12-62)||(49183679-49183729)
chr3 (47-116)||(3707034-3707103)
chr3 (172-241)||(11239119-11239188)
chr3 (192-241)||(13643073-13643122)
chr3 (170-219)||(26849047-26849096)
chr3 (30-71)||(33193406-33193447)
chr3 (12-72)||(35283060-35283121)
chr3 (12-72)||(40118931-40118992)
chr3 (172-241)||(44952311-44952380)
chr3 (12-68)||(4247095-4247151)
chr3 (172-200)||(18460985-18461013)
chr3 (12-75)||(21777683-21777747)
chr3 (12-60)||(35989102-35989150)
chr3 (12-115)||(44400639-44400743)
chr3 (171-219)||(45826801-45826849)
[»] chr1 (63 HSPs)
chr1 (177-241)||(13931888-13931952)
chr1 (13-116)||(52073496-52073600)
chr1 (188-244)||(1227893-1227949)
chr1 (29-116)||(50586976-50587063)
chr1 (170-241)||(29091670-29091741)
chr1 (171-229)||(19094129-19094187)
chr1 (12-69)||(23412000-23412058)
chr1 (31-116)||(1278402-1278487)
chr1 (12-115)||(27102871-27102976)
chr1 (12-108)||(28848836-28848933)
chr1 (169-241)||(5518500-5518572)
chr1 (12-75)||(29092056-29092120)
chr1 (12-62)||(5584488-5584539)
chr1 (12-62)||(17760522-17760573)
chr1 (12-62)||(36269726-36269777)
chr1 (170-241)||(47037461-47037532)
chr1 (11-62)||(51839229-51839280)
chr1 (177-219)||(31806760-31806802)
chr1 (12-62)||(32287564-32287614)
chr1 (12-116)||(41432813-41432916)
chr1 (179-241)||(52699472-52699534)
chr1 (15-115)||(36886799-36886900)
chr1 (11-75)||(34552133-34552197)
chr1 (177-217)||(38519066-38519106)
chr1 (12-75)||(41817346-41817410)
chr1 (12-108)||(42333582-42333678)
chr1 (180-219)||(11014448-11014487)
chr1 (12-62)||(34154375-34154426)
chr1 (12-62)||(37649663-37649714)
chr1 (12-115)||(39886972-39887078)
chr1 (12-62)||(46001549-46001600)
chr1 (172-235)||(47677653-47677715)
chr1 (12-108)||(47742467-47742566)
chr1 (12-62)||(52068184-52068235)
chr1 (172-219)||(52630799-52630846)
chr1 (12-62)||(69717-69767)
chr1 (169-219)||(3572561-3572611)
chr1 (169-219)||(5806287-5806337)
chr1 (13-62)||(9595558-9595608)
chr1 (177-219)||(20260090-20260132)
chr1 (179-241)||(30241013-30241075)
chr1 (169-219)||(32202327-32202377)
chr1 (17-63)||(34749648-34749694)
chr1 (12-53)||(1688264-1688305)
chr1 (170-219)||(2632878-2632927)
chr1 (168-241)||(6911497-6911570)
chr1 (172-241)||(6978774-6978843)
chr1 (172-241)||(9115841-9115910)
chr1 (177-218)||(24116341-24116382)
chr1 (12-53)||(33579227-33579268)
chr1 (19-107)||(33854893-33854982)
chr1 (19-107)||(33925940-33926029)
chr1 (32-77)||(34738284-34738329)
chr1 (170-219)||(46666734-46666783)
chr1 (13-93)||(52331001-52331082)
chr1 (179-219)||(9011167-9011207)
chr1 (177-229)||(16257012-16257064)
chr1 (177-241)||(25789767-25789831)
chr1 (179-219)||(37336458-37336498)
chr1 (171-219)||(38964677-38964725)
chr1 (177-241)||(39930461-39930525)
chr1 (12-52)||(50084118-50084158)
chr1 (12-63)||(50476520-50476572)
[»] chr8 (34 HSPs)
chr8 (12-72)||(31149886-31149946)
chr8 (177-241)||(25899635-25899699)
chr8 (12-108)||(23932605-23932702)
chr8 (12-71)||(16024600-16024660)
chr8 (177-241)||(33444630-33444694)
chr8 (178-241)||(43871971-43872034)
chr8 (12-62)||(43239653-43239703)
chr8 (170-219)||(32660930-32660979)
chr8 (12-114)||(35376674-35376779)
chr8 (12-52)||(5911473-5911513)
chr8 (12-63)||(11229270-11229322)
chr8 (179-235)||(15226973-15227029)
chr8 (177-241)||(21137136-21137200)
chr8 (16-75)||(21173909-21173969)
chr8 (12-63)||(40985121-40985173)
chr8 (177-241)||(42755870-42755934)
chr8 (12-63)||(43733167-43733219)
chr8 (12-76)||(44879516-44879580)
chr8 (12-76)||(44880341-44880405)
chr8 (12-62)||(79660-79711)
chr8 (16-75)||(3393953-3394012)
chr8 (12-63)||(22330673-22330724)
chr8 (12-63)||(41455239-41455290)
chr8 (33-75)||(4428858-4428900)
chr8 (177-219)||(5020494-5020536)
chr8 (177-219)||(7931264-7931306)
chr8 (12-62)||(8228517-8228567)
chr8 (12-62)||(8950329-8950379)
chr8 (172-241)||(12710648-12710717)
chr8 (15-115)||(34335971-34336071)
chr8 (178-219)||(40197081-40197122)
chr8 (169-205)||(7317412-7317448)
chr8 (12-115)||(41866164-41866268)
chr8 (12-76)||(43438341-43438405)
[»] scaffold0702 (1 HSPs)
scaffold0702 (172-241)||(3564-3633)
[»] scaffold0662 (1 HSPs)
scaffold0662 (172-241)||(4471-4540)
[»] chr7 (45 HSPs)
chr7 (11-115)||(14676152-14676257)
chr7 (12-116)||(32820278-32820382)
chr7 (177-227)||(37534107-37534157)
chr7 (20-108)||(23551595-23551683)
chr7 (14-62)||(46442692-46442740)
chr7 (12-63)||(4788049-4788100)
chr7 (172-219)||(11000728-11000775)
chr7 (12-62)||(15748996-15749047)
chr7 (168-227)||(45440925-45440984)
chr7 (12-62)||(45940447-45940498)
chr7 (12-62)||(19791674-19791724)
chr7 (169-241)||(18824148-18824221)
chr7 (12-69)||(24924627-24924684)
chr7 (28-69)||(38137917-38137958)
chr7 (164-241)||(39554186-39554263)
chr7 (12-63)||(13697264-13697316)
chr7 (12-63)||(21018741-21018793)
chr7 (12-52)||(31055368-31055408)
chr7 (12-64)||(33187893-33187945)
chr7 (12-72)||(42113006-42113066)
chr7 (12-62)||(2826294-2826345)
chr7 (12-62)||(38505381-38505432)
chr7 (12-62)||(4125932-4125981)
chr7 (177-219)||(6656228-6656270)
chr7 (171-241)||(27213853-27213923)
chr7 (177-227)||(30685996-30686046)
chr7 (169-239)||(31921744-31921813)
chr7 (177-219)||(38544219-38544261)
chr7 (15-72)||(41471422-41471480)
chr7 (16-61)||(42253942-42253988)
chr7 (12-113)||(7347939-7348039)
chr7 (170-219)||(8419586-8419635)
chr7 (172-241)||(11329996-11330065)
chr7 (12-72)||(23466044-23466105)
chr7 (29-62)||(34670179-34670212)
chr7 (172-209)||(41684021-41684058)
chr7 (12-77)||(42622330-42622395)
chr7 (13-62)||(44858149-44858198)
chr7 (177-217)||(6656477-6656517)
chr7 (12-115)||(32429977-32430081)
chr7 (12-75)||(33872158-33872222)
chr7 (177-241)||(41632368-41632432)
chr7 (180-240)||(43445890-43445950)
chr7 (177-241)||(43949248-43949312)
chr7 (179-219)||(47246070-47246110)
[»] chr6 (14 HSPs)
chr6 (12-62)||(33590375-33590425)
chr6 (12-108)||(32719423-32719520)
chr6 (12-62)||(1567264-1567315)
chr6 (12-116)||(13380469-13380575)
chr6 (169-219)||(3869530-3869580)
chr6 (170-241)||(8029336-8029407)
chr6 (12-47)||(26713862-26713897)
chr6 (177-219)||(10849787-10849829)
chr6 (184-238)||(21008035-21008089)
chr6 (12-114)||(24874982-24875083)
chr6 (170-219)||(2657725-2657774)
chr6 (12-77)||(4464914-4464979)
chr6 (170-219)||(7053567-7053616)
chr6 (177-241)||(18897924-18897988)
[»] scaffold0245 (1 HSPs)
scaffold0245 (31-116)||(4079-4164)
[»] scaffold0229 (1 HSPs)
scaffold0229 (31-116)||(4410-4495)
[»] scaffold0128 (1 HSPs)
scaffold0128 (12-62)||(26362-26413)
[»] scaffold1480 (1 HSPs)
scaffold1480 (171-229)||(383-441)
[»] scaffold0991 (1 HSPs)
scaffold0991 (12-53)||(3241-3283)
[»] scaffold0519 (1 HSPs)
scaffold0519 (12-63)||(7497-7549)
[»] scaffold0248 (1 HSPs)
scaffold0248 (12-75)||(243-307)
[»] scaffold0136 (1 HSPs)
scaffold0136 (12-75)||(2070-2134)
[»] scaffold0051 (4 HSPs)
scaffold0051 (14-62)||(740-788)
scaffold0051 (14-62)||(3617-3665)
scaffold0051 (12-62)||(6804-6855)
scaffold0051 (12-62)||(7787-7838)
[»] scaffold0031 (1 HSPs)
scaffold0031 (12-82)||(93553-93625)
[»] scaffold0053 (1 HSPs)
scaffold0053 (12-62)||(29227-29278)
[»] scaffold0036 (1 HSPs)
scaffold0036 (12-72)||(82769-82830)


Alignment Details
Target: chr2 (Bit Score: 181; Significance: 7e-98; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 39819944 - 39819699
Alignment:
Q  1 aaactcgtctc--atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcattt 98  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||    
T  39819944 aaactcgtctccaatacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaatgaacccccaaagcattcccttctcaatatcattt 39819845  T
Q  99 atttcttccatttgctccnnnnnnnn---ctaaacctctcccctccattctcttcaaaactcgcaaataaagtctaagggcgtgtttgtttcaagttata 195  Q
    ||||||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39819844 atttcttccatttgctcctttttttttctctaaacctctcccctccattctcttcaaaactcgcaaataaagtctaagggcgtgtttgtttcaagttata 39819745  T
Q  196 tttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  39819744 tttgtagattcctgaaaataaaatcatgaaaatacatatgcctatg 39819699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 25455100 - 25455027
Alignment:
Q  168 tctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||| |||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||    
T  25455100 tctaagggtgtgtttgtttcaagttatatttgtagattcctgagaataaaatcataaaaatacatatgtctatg 25455027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 40570096 - 40570023
Alignment:
Q  168 tctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||| ||||||||||||||||||| |||||||||||||| ||||||||||| |||| | | |||||||||    
T  40570096 tctaagggtgtgtttgtttcaagttataattgtagattcctgggaataaaatcataaaaacatacatgcctatg 40570023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 5322166 - 5322230
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||||    
T  5322166 atacagtttttgagttcccccaaatgaggaggattttgtattatgaagaaaaatgaacccccaaa 5322230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 108
Target Start/End: Complemental strand, 36030846 - 36030750
Alignment:
Q  13 tacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    |||||||||| |||||||| |||||||||| ||||||||||  ||||||||| ||||||||||| | ||| ||||||||  || | |||||||||||    
T  36030846 tacaatttttgagttcccccaaatgaggagaattttgtattctgaagaaaaatgaacccccaaagccctctcttctcaaggtcctctatttcttcca 36030750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 30523280 - 30523230
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  30523280 atacaattttttagttccccaaattagaaggattttgtattatgaagaaaa 30523230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 14832878 - 14832813
Alignment:
Q  176 cgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||||||||| ||||||| | |||||||| ||  ||||| |||||||||||    
T  14832878 cgtgtttgtttcaagttatatttgttgattcctaggaataaaatgatagaaatatatatgcctatg 14832813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 41100152 - 41100193
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatta 53  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  41100152 atacaattttttagttccccaaatgaggagggttttgtatta 41100193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 14403231 - 14403299
Alignment:
Q  171 aagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgccta 239  Q
    ||||| |||||||||| ||||| ||||||| |||||||||||||||||| || |||||| | |||||||    
T  14403231 aagggtgtgtttgtttgaagttgtatttgttgattcctggaaataaaatgataaaaatatacatgccta 14403299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 15555393 - 15555457
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    |||||||||||||||||| ||||||||| ||| |||||||||| |||||||||  ||||||||||    
T  15555393 atacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaaattaacccccaaa 15555457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 16519136 - 16519188
Alignment:
Q  12 atacaattttttagtt-ccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||| ||||||||| |||||||||||||||||||||||||| |||||||||    
T  16519136 atacaactttttagtttccccaaatgaggaggattttgtattatgaagaaaaa 16519188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 18713661 - 18713725
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||||||||||||||||| ||||| ||| |||||||| ||  ||||| |||||||||||    
T  18713661 gtgtttgtttcaagttatatttgttgattcatggtaataaaatgatataaatatatatgcctatg 18713725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 43572591 - 43572655
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||   ||||||||||    
T  43572591 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaa 43572655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 1364867 - 1364816
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  1364867 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 1364816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 11515078 - 11515027
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  11515078 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 11515027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 17542435 - 17542373
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctat 240  Q
    |||||||||| |||||||||||||||| |||||  ||||||||||| ||||| |||||||||||    
T  17542435 gtgtttgttt-aagttatatttgtagagtcctgtgaataaaatcataaaaatgcatatgcctat 17542373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 37194301 - 37194250
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  37194301 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 37194250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 40212037 - 40211986
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  40212037 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 40211986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 3737273 - 3737335
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaa 74  Q
    ||||||||||| |||||  |||||||||| |||||||||||| |||||||||  |||||||||    
T  3737273 atacaatttttgagttcttcaaatgaggatgattttgtattatgaagaaaaattaacccccaa 3737335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 34757639 - 34757589
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaa 61  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  34757639 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaa 34757589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 1408905 - 1408844
Alignment:
Q  16 aattttttagttc-cccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaa 76  Q
    ||||||||||||| |||||| |||||||| ||||| ||| ||||||||| ||||||||||||    
T  1408905 aattttttagttcacccaaacgaggaggaatttgtgttatgaagaaaaatgaacccccaaaa 1408844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 28311701 - 28311765
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||||||||||||||||| |||||| || |||||||| ||   |||| |||||||||||    
T  28311701 gtgtttgtttcaagttatatttgttgattcccgggaataaaatgataggaatatatatgcctatg 28311765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 39750184 - 39750148
Alignment:
Q  13 tacaattttttagttccccaaatgaggaggattttgt 49  Q
    |||||||||||||||||||||||||||||| ||||||    
T  39750184 tacaattttttagttccccaaatgaggagggttttgt 39750148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 39913285 - 39913182
Alignment:
Q  16 aattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaac-ac--tcccttctcaatatcatttatttcttccatttg 112  Q
    ||||||| ||||||||||||||||||   ||| ||| ||||||||||| ||||||||| ||| ||  |||| || ||  || ||||||||||||||||||    
T  39913285 aatttttgagttccccaaatgaggagatatttatatcaggaagaaaaatgaacccccagaacgaccttcccctcccaccattatttatttcttccatttg 39913186  T
Q  113 ctcc 116  Q
    ||||    
T  39913185 ctcc 39913182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 13018525 - 13018576
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||| |||||||||||| ||||||||||||| |||||||||| ||||||||    
T  13018525 atacatttttttagttcctccaaatgaggagggttttgtattatgaagaaaa 13018576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 26905838 - 26905787
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||| | ||||||||    
T  26905838 atacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaa 26905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 31584817 - 31584864
Alignment:
Q  16 aattttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    ||||||||||||||||||||||||||| |||| ||||  |||||||||    
T  31584817 aattttttagttccccaaatgaggagggttttatattttgaagaaaaa 31584864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 35550206 - 35550253
Alignment:
Q  13 tacaattttttagttccccaaatgaggaggattttgtattaggaagaa 60  Q
    ||||| |||||||||||||||||||||||| ||| |||||| ||||||    
T  35550206 tacaactttttagttccccaaatgaggagggtttagtattatgaagaa 35550253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 9087512 - 9087562
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||| ||||||||||||||||||| |||| ||||  ||||||||    
T  9087512 atacaatttttcagttccccaaatgaggagggttttatattttgaagaaaa 9087562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 24499507 - 24499465
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||||||||| ||||| | ||||||||||    
T  24499507 gtgtttgtttcaagttatatttgttgattcatagaaataaaat 24499465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 37233496 - 37233454
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||||||||| |||||| || ||||||||    
T  37233496 gtgtttgtttcaagttatatttgttgattcccgggaataaaat 37233454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 346342 - 346391
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  346342 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 346391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 2521749 - 2521700
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| | |||||||||    
T  2521749 taagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaat 2521700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 4003462 - 4003401
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    ||||||||||| |||||||| ||||||||||  |||||||||| |||||||||  |||||||    
T  4003462 atacaatttttgagttcccccaaatgaggagagttttgtattatgaagaaaaattaaccccc 4003401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 5770115 - 5770156
Alignment:
Q  178 tgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||| |||| ||||||||| ||||||||    
T  5770115 tgtttgtttcaagttataattgttgattcctgggaataaaat 5770156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 6571763 - 6571690
Alignment:
Q  168 tctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||| || ||||||| ||||||||||||| |||| | ||||||||||| ||   |||| |||||||||||    
T  6571763 tctaagggtgtatttgtttaaagttatatttgttgatttccggaaataaaatgataggaatatatatgcctatg 6571690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 27357960 - 27357997
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcc 207  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  27357960 taagggtgtgtttgtttcaagttatatttgttgattcc 27357997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 36642405 - 36642450
Alignment:
Q  18 ttttttagttccc-caaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||    
T  36642405 ttttttagttccctcaaatgaggaggattttgtataatgaagaaaa 36642450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 39995128 - 39995177
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  39995128 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 39995177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 45409324 - 45409287
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcc 207  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  45409324 taagggtgtgtttgtttcaagttatatttgttgattcc 45409287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 1988378 - 1988314
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||| ||||||||||||| |||| |||| |||||||| ||  ||||| | |||||||||    
T  1988378 gtgtttgtttgaagttatatttgttgatttctgggaataaaatgatagaaatatacatgcctatg 1988314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Complemental strand, 3254666 - 3254634
Alignment:
Q  15 caattttttagttccccaaatgaggaggatttt 47  Q
    |||||||||||||||||||||||||||| ||||    
T  3254666 caattttttagttccccaaatgaggagggtttt 3254634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 9733850 - 9733914
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  9733850 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9733914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 11522227 - 11522267
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatt 52  Q
    |||||| |||||||||||||||||||||||| |||| ||||    
T  11522227 atacaactttttagttccccaaatgaggagggttttatatt 11522267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 11949932 - 11949888
Alignment:
Q  19 tttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||||||| ||  |||||||||| |||||||||    
T  11949932 tttttagttccccaaatgagaagagttttgtattatgaagaaaaa 11949888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 31082849 - 31082745
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    ||||||| |||||||||||| ||| ||||||| ||| |||||| ||||||||   |||||||||| | ||||| || || | || | ||||||||||| |    
T  31082849 atacaatattttagttcccccaaacgaggagggtttagtattacgaagaaaagttaacccccaaagccctcccctcccattttcctctatttcttccact 31082750  T
Q  111 tgctc 115  Q
    |||||    
T  31082749 tgctc 31082745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 36870297 - 36870245
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||||||| ||||||||||| |||| ||||  |||||||||    
T  36870297 atacaattttttagttcccccaaatgaggagggttttctattttgaagaaaaa 36870245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 37851939 - 37851883
Alignment:
Q  163 taaagtctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| |||||| | ||||||||||||| ||||| ||||||| ||| |||||||||    
T  37851939 taaagtgtaagggtgggtttgtttcaagtaatattcgtagatttctgaaaataaaat 37851883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 41750596 - 41750532
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||| ||||||| | |||||||| ||  ||||  |||||||||||    
T  41750596 gtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 41750532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 45694253 - 45694213
Alignment:
Q  179 gtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||||||||||| ||||||| |||| ||||||||    
T  45694253 gtttgtttcaagttatattcgtagatttctgggaataaaat 45694213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 19389865 - 19389961
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||  ||  |||||||||||||||||||||||||    
T  19389865 atacaattttttagttccccaaatgaggaggattttgtattatgaagataaatgaacccccaaaaccttcttttctcaatatcatttatttcttcca 19389961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 43346899 - 43346957
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatg 235  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  43346899 gtgtttgtttcaagttatatttgtagattcctgaaaataaaatcataaaaatacatatg 43346957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 6491218 - 6491154
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||||| |||||||| ||||||||| |||||||||||| ||||||||| |||||||||||    
T  6491218 atacaatttttgagttcccccaaatgaggaagattttgtattatgaagaaaaatgaacccccaaa 6491154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 17668188 - 17668293
Alignment:
Q  11 catacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccat 109  Q
    ||||| |||||| ||||||| |||||||||||||||| ||||||  |||||||| ||||| ||||| |  ||||  |||||| |||| |||||||||||     
T  17668188 cataccatttttgagttcccacaaatgaggaggatttagtattataaagaaaaatgaacctccaaagccttccccactcaatctcatatatttcttccac 17668287  T
Q  110 ttgctc 115  Q
    ||||||    
T  17668288 ttgctc 17668293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 7398827 - 7398923
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    ||||||||||  ||||||||||||||||| ||||||| |||| ||||||||| || ||||||||    |||| ||||||| |||| ||||| |||||    
T  7398827 atacaattttaaagttccccaaatgaggatgattttgaattatgaagaaaaatgagcccccaaagtcttcccctctcaatgtcatatattttttcca 7398923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 10843078 - 10843014
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||   ||||||||||    
T  10843078 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaa 10843014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 2561138 - 2561043
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttc 106  Q
    |||| ||||| ||||||| ||||||||| | |||||||||||| ||||||||  ||||| ||||| |  |||||||||||| |||| |||||||||    
T  2561138 atactattttctagttcctccaaatgagaatgattttgtattacgaagaaaagtgaacctccaaagctttcccttctcaatgtcatctatttcttc 2561043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 35683520 - 35683571
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  35683520 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 35683571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 9684831 - 9684933
Alignment:
Q  15 caattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttgc 113  Q
    |||||||||| |||||| ||||||||||| |||||||||| ||||||||  |||   ||||| |  |||| |||||||||||| |||||||| || ||||    
T  9684831 caattttttaattcccccaaatgaggagggttttgtattatgaagaaaattgaaataccaaagccttcccctctcaatatcatctatttctttcacttgc 9684930  T
Q  114 tcc 116  Q
    |||    
T  9684931 tcc 9684933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 29543011 - 29543061
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||| ||||||||||||||||||| |||| ||||||||| ||||||||    
T  29543011 ctaagggtgtgtttgtttcaagttataattgttgattcctgggaataaaat 29543061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 22103543 - 22103455
Alignment:
Q  19 tttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    ||||||||||||| ||||| |||| |||||||||| |||||||||  |||||||||| || ||| || | ||| || |||||||||||||    
T  22103543 tttttagttccccgaatgatgagggttttgtattatgaagaaaaattaacccccaaatcattccgtt-taaatgtcttttatttcttcca 22103455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 39649605 - 39649500
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaa-cccccaaaacactcccttctcaatatcatttatttcttccat 109  Q
    |||||||||||||||||| ||||||||||||| |||||||| | ||||||||   || |||||||| | ||||  || || | ||||||||||||||||     
T  39649605 atacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaagccctcctctcccattttcatttatttcttccac 39649506  T
Q  110 ttgctc 115  Q
    ||||||    
T  39649505 ttgctc 39649500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 40275766 - 40275823
Alignment:
Q  184 tttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||||||  ||| |||||||| || |||||||||||| |||||    
T  40275766 tttcaagttatatttgtagatttttgggaataaaattataaaaatacatatgtctatg 40275823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 2164123 - 2164183
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||||||||||||||||||||| ||| ||||||||||  | ||||||||  ||||||||    
T  2164123 atacaattttttagttccccaaattagggggattttgtaccatgaagaaaactgaaccccc 2164183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 5772767 - 5772831
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||||||| |||| ||||||||||||| |||||||||| ||||||||   ||||||||||    
T  5772767 atacaattttttaattcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaa 5772831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 6373171 - 6373131
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatt 52  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  6373171 atacaattttttagttccccaaatgaggagggttttatatt 6373131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Original strand, 6491391 - 6491475
Alignment:
Q  32 aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttgctcc 116  Q
    ||||||||| |||||||||||| ||||||||| ||||||||||| | ||| | |  |||| || | ||||||||||| |||||||    
T  6491391 aaatgaggaagattttgtattatgaagaaaaatgaacccccaaagccctctcctaccaatttcttctatttcttccacttgctcc 6491475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 35708801 - 35708861
Alignment:
Q  13 tacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||||||||||||||| ||||||||||||||||| || |  |||||||||| |||||||    
T  35708801 tacaattttttagttccctcaaatgaggaggattttatactttgaagaaaaactaaccccc 35708861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 3925828 - 3925879
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||||||||||||||||| ||| | ||| | |||||||||    
T  3925828 atacaattttttagttccccaaatgaggagaattctatatcatgaagaaaaa 3925879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 4765555 - 4765606
Alignment:
Q  168 tctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  4765555 tctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 4765606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 43496908 - 43496971
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||||| ||||||||||||||| ||  ||||||||||  ||||||||  ||||||||||    
T  43496908 atacaatttttaagttccccaaatgagcagagttttgtattattaagaaaaattaacccccaaa 43496971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 1978225 - 1978179
Alignment:
Q  26 ttccccaaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||||||||||| ||||||||||||| ||||||| | ||||||||    
T  1978225 ttccccaaatgagggggattttgtattatgaagaaacatgaaccccc 1978179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 6091784 - 6091718
Alignment:
Q  175 gcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  6091784 gcgtgtttgtttcaagttataattgttgattcccgggaataaaatgatataaatgtatatgcctatg 6091718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 18412284 - 18412234
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||| ||||||||||||||||||| || | ||||||||| ||||||||    
T  18412284 ctaagggtgtgtttgtttcaagttataattattgattcctgggaataaaat 18412234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 18675768 - 18675810
Alignment:
Q  20 ttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||    
T  18675768 ttttagttccccaaatgagaaggatttagtattacgaagaaaa 18675810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 20962657 - 20962615
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||    
T  20962657 gtgtttgtttcaagttatattcgtagattcttgggaataaaat 20962615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 555703 - 555752
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  555703 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 555752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 12970527 - 12970576
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  12970527 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 12970576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 27351054 - 27351102
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaa 60  Q
    ||||| |||||||||||| | ||||||| ||||||||||||| ||||||    
T  27351054 atacatttttttagttcctccaatgaggcggattttgtattacgaagaa 27351102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 29709557 - 29709497
Alignment:
Q  12 atacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaacgaacccc 71  Q
    ||||||||||||||||||  ||||||||||| ||||||||||| | ||||||  |||||||    
T  29709557 atacaattttttagttccttcaaatgaggagaattttgtattatggagaaaagtgaacccc 29709497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 39428975 - 39428935
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatt 52  Q
    |||||||||||||||||| |||||||||| |||||| ||||    
T  39428975 atacaattttttagttcctcaaatgaggaagattttatatt 39428935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 21081384 - 21081278
Alignment:
Q  12 atacaattttttagtt-ccccaaatgaggaggattttgtattaggaagaaaaacgaaccc-ccaaaacactcccttctcaatatcatttatttcttccat 109  Q
    ||||||||||| |||| ||||||||||||||| |||||| ||| ||||||||| |||||| |||||||| |||| ||||||| |||| |||||||||||     
T  21081384 atacaatttttaagttaccccaaatgaggagggttttgttttatgaagaaaaatgaaccctccaaaacattcccctctcaatgtcatctatttcttccac 21081285  T
Q  110 ttgctcc 116  Q
    |||||||    
T  21081284 ttgctcc 21081278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 49936549 - 49936451
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaac-ccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    |||||||||||||||||||| |||| ||||||||||||||||| ||||||||  |||| ||||||||| ||||| ||||||  || |||||||| ||||    
T  49936549 atacaattttttagttcccccaaattaggaggattttgtattatgaagaaaagtgaacaccccaaaaccctcccctctcaaagtcctttatttcatcca 49936451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 28175511 - 28175562
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  28175511 atacaattttttagttcctccaaatgaggaggattttgtattatgaagaaaa 28175562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 51974361 - 51974311
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  51974361 atacaatttgttagttccccaaatgaagaggattttgtattatgaagaaaa 51974311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 54205873 - 54205812
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    ||||||||||| |||||||| |||||||||||||||||| ||| ||||||||| ||||||||    
T  54205873 atacaatttttgagttcccccaaatgaggaggattttgttttatgaagaaaaatgaaccccc 54205812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 26165440 - 26165384
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaat 228  Q
    |||| |||||||||||| ||||||||||||||||||||  ||||||||||| |||||    
T  26165440 agggtgtgtttgtttcatgttatatttgtagattcctgagaataaaatcataaaaat 26165384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 27485309 - 27485353
Alignment:
Q  31 caaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||    
T  27485309 caaatgaggaggattttgtattatgaagaaaaatgaacccccaaa 27485353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 45971594 - 45971491
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    |||||||||||||||||||| |||||||| || ||| |||||| ||||||||   |||||||||||| ||||| ||||| | || | ||||||||||| |    
T  45971594 atacaattttttagttcccccaaatgaggggg-tttagtattatgaagaaaagttaacccccaaaaccctcccctctcattttcctctatttcttccact 45971496  T
Q  111 tgctc 115  Q
    |||||    
T  45971495 tgctc 45971491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 47670433 - 47670369
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||  ||||  |||||||||||    
T  47670433 gtgtttgtttcaagttataattgttgattcctggaaataaaatgatagaaatgtatatgcctatg 47670369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 12708881 - 12708932
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  12708881 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 12708932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 23686865 - 23686794
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||| |||||||||||    
T  23686865 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 23686794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 29114280 - 29114331
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  29114280 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 29114331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 30198818 - 30198869
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  30198818 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 30198869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 31428845 - 31428739
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaa-cactcccttctcaatatcatttatttcttccat 109  Q
    ||||||||||||| |||||| |||||| |||| |||||||||| ||| |||||  ||| ||||||| |  |||| |||||||||||| ||||| ||| ||    
T  31428845 atacaattttttaattcccccaaatgaagagggttttgtattacgaataaaaataaactcccaaaagctttcccctctcaatatcatctattttttctat 31428746  T
Q  110 ttgctcc 116  Q
    |||||||    
T  31428745 ttgctcc 31428739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 35959230 - 35959124
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaa-cgaacccccaaaacactcccttctcaatatcatttatttcttccat 109  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| |||||||||   |||||||||| | ||||| || |||| |  | |||||||||||     
T  35959230 atacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaattaaacccccaaagccctcccctcacaatgtactctatttcttccac 35959131  T
Q  110 ttgctcc 116  Q
    |||||||    
T  35959130 ttgctcc 35959124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 40435981 - 40435907
Alignment:
Q  167 gtctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  40435981 gtctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 40435907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 45899428 - 45899379
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||    
T  45899428 atacaattttttagttccccaaattagg-ggattttgtattatgaagaaaa 45899379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 47063726 - 47063686
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatt 52  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  47063726 atacaattttttagttccccaaatgaggagggttttatatt 47063686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 16318651 - 16318600
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| ||||||| || ||||||||    
T  16318651 atacaattttttagttcctccaaatgaggagggttttgtaatatgaagaaaa 16318600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 27942815 - 27942772
Alignment:
Q  176 cgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||||| |||| |||||| |||||||||||    
T  27942815 cgtgtttgtttcaagttataattgttgattcccggaaataaaat 27942772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 30307407 - 30307356
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||||| |||||||||||||||| ||||  ||||||||    
T  30307407 atacaattttttagttcccccaaatgaggaggattttatattttgaagaaaa 30307356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 39498901 - 39498854
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||| ||||||||||||||||||| |||| |||||| |||||||||||    
T  39498901 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaat 39498854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 39502240 - 39502193
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||| ||||||||||||||||||| |||| |||||| |||||||||||    
T  39502240 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaat 39502193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 48879403 - 48879332
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  48879403 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 48879332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 54723948 - 54724039
Alignment:
Q  16 aattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcc 107  Q
    ||||||||| || | |||||||| |||||||||||||| |||||||||  |||| ||||||   || | ||||||| |||| ||||||||||    
T  54723948 aattttttaatttctcaaatgagtaggattttgtattatgaagaaaaataaacctccaaaatgttctcctctcaatgtcatctatttcttcc 54724039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 55813673 - 55813724
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||| |||||||||||| |||||| ||||  |||||||||    
T  55813673 atacaattttttagtttcccaaatgaggaagattttatattttgaagaaaaa 55813724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 15498841 - 15498883
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattag 54  Q
    ||||||||||| ||||||||||||||||||| || ||||||||    
T  15498841 atacaatttttgagttccccaaatgaggagggttatgtattag 15498883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 30415981 - 30415943
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcc 207  Q
    ||||||| |||||||||||||||||||||||| ||||||    
T  30415981 ctaagggtgtgtttgtttcaagttatatttgttgattcc 30415943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 31937873 - 31937923
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaa 227  Q
    ||||||||||||||||||| |||||||||  || |||||||||||| ||||    
T  31937873 gtgtttgtttcaagttataattgtagatttttgaaaataaaatcataaaaa 31937923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 32866779 - 32866828
Alignment:
Q  13 tacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||||| |||||||||| | ||||||||| |||||||||    
T  32866779 tacaattttttagttccc-aaatgaggagaactttgtattatgaagaaaaa 32866828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 34049601 - 34049643
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||||||||||| |||| |||||| |||||||||||    
T  34049601 gtgtttgtttcaagttataattgttgattcccggaaataaaat 34049643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 46176974 - 46177072
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaa-cccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||  ||||||||  || |||||||||| ||||| || |||| |  | |||||||||||    
T  46176974 atacaactttttagttcctccaaatgaggagggttttgtattattaagaaaaattaaccccccaaaaccctcccctcccaatgtactctatttcttcca 46177072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 6279918 - 6279967
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  6279918 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 6279967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 25932517 - 25932448
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||| |||| ||||||| | |||||||| ||  ||||  |||||||||||    
T  25932517 agggtgtgtttgtttcaagttataattgttgattcctaggaataaaatgatagaaatgtatatgcctatg 25932448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 35999766 - 35999693
Alignment:
Q  168 tctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||| ||||||||||||||||||| |||| |||||  || |||||||| ||  ||||  |||||||||||    
T  35999766 tctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgatagaaatgtatatgcctatg 35999693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 39835304 - 39835353
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  39835304 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 39835353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 41709172 - 41709269
Alignment:
Q  19 tttttagttcccca-aatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttgctc 115  Q
    |||||||||||||| ||||| |||| |||  ||||| ||||||||   |||||||||||| ||||| ||||| | || | ||||||||||| ||||||    
T  41709172 tttttagttccccagaatgaagagggtttaatattacgaagaaaagttaacccccaaaactctcccatctcattttcctctatttcttccacttgctc 41709269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 43723340 - 43723271
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||| |||| |||||| | ||||||||| ||  ||||  |||||||||||    
T  43723340 agggtgtgtttgtttcaagttataattgttgattcccgaaaataaaatgatagaaatgtatatgcctatg 43723271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 48417647 - 48417712
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggatt-ttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||||| |||||||| |||| | || |||| |||||||| |||||||||||||||||||||    
T  48417647 atacaatttttgagttcccccaaattaagaagattcttgtattatgaagaaaaacgaacccccaaa 48417712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Original strand, 8827867 - 8827915
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaa 60  Q
    |||||| ||||||||| |||||||||||||  |||||||||| ||||||    
T  8827867 atacaactttttagtttcccaaatgaggagagttttgtattatgaagaa 8827915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 18094334 - 18094278
Alignment:
Q  163 taaagtctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| |||||| | ||||||||||||| ||||| ||||||| ||| |||||||||    
T  18094334 taaagtgtaagggtgggtttgtttcaagtaatattcgtagatttctgaaaataaaat 18094278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 42650670 - 42650618
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||||||| ||||||||||| |||| ||||  |||||||||    
T  42650670 atacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaa 42650618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 46669992 - 46670044
Alignment:
Q  12 atacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaa 63  Q
    ||||||||||||||||||| |||||||||||| |||| ||||  |||||||||    
T  46669992 atacaattttttagttccctcaaatgaggagggttttatattttgaagaaaaa 46670044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 52636786 - 52636734
Alignment:
Q  20 ttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    ||||||||| ||||||||||||| |||| ||||| |||||||||  |||||||    
T  52636786 ttttagttctccaaatgaggagggttttatattatgaagaaaaattaaccccc 52636734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 53013620 - 53013576
Alignment:
Q  31 caaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    |||||||||| |||||||||||| ||||||||| ||||| |||||    
T  53013620 caaatgaggaagattttgtattatgaagaaaaatgaacctccaaa 53013576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 32858864 - 32858760
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    ||||||||||| |||||||| |||||||||||||||| ||||| ||||||||| ||||||||||| |  | || ||||||| |||| ||||||||||| |    
T  32858864 atacaatttttgagttcccccaaatgaggaggattttatattatgaagaaaaatgaacccccaaagcctttccctctcaatgtcatctatttcttccact 32858765  T
Q  111 tgctc 115  Q
    |||||    
T  32858764 tgctc 32858760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 1132972 - 1133076
Alignment:
Q  12 atacaattttttagttccccaaa-tgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    ||||||||||| ||||||||||| |||||||  |||||||||| |||| |||| |||||||||||||  |||| ||||||| |||| |||||| |||| |    
T  1132972 atacaatttttgagttccccaaaatgaggagagttttgtattatgaagtaaaatgaacccccaaaaccttcccctctcaatgtcatctatttcgtccact 1133071  T
Q  111 tgctc 115  Q
    |||||    
T  1133072 tgctc 1133076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 6831956 - 6832005
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatca 221  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  6831956 agggtgtgtttgtttcaacttatatttgtagattcctggaaataaaatca 6832005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 11500138 - 11500036
Alignment:
Q  12 atacaattttttagttc-cccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    ||||||||||||||||  |||||||||||||| |||| ||||| |||||||||  |||||||||||   |||| | |||||||||| ||||||||| |||    
T  11500138 atacaattttttagttatcccaaatgaggagggttttctattatgaagaaaaa-taacccccaaaatcttcccctttcaatatcatctatttcttctatt 11500040  T
Q  111 tgct 114  Q
    ||||    
T  11500039 tgct 11500036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 40584664 - 40584603
Alignment:
Q  180 tttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||| ||||||||||||||||||||||  ||||||||||| ||||| |||||| |||||    
T  40584664 tttgttttaagttatatttgtagattcctgagaataaaatcataaaaatgcatatgtctatg 40584603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 49855855 - 49855960
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    ||||||||||| |||||| | ||||||| |  ||||||||||| ||||||||| |||||||||||||  |||  ||||||| |||| |||||||| || |    
T  49855855 atacaatttttgagttcctctaaatgagaattattttgtattatgaagaaaaatgaacccccaaaaccttcctctctcaatgtcatctatttctttcact 49855954  T
Q  111 tgctcc 116  Q
    ||||||    
T  49855955 tgctcc 49855960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 49860563 - 49860619
Alignment:
Q  17 attttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaa 74  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||    
T  49860563 attttttagttccccaaatgaggagaattttgtattatgaa-aaaaatgaacccccaa 49860619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 33944687 - 33944751
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||   ||||||||||    
T  33944687 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaa 33944751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 3537242 - 3537191
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  3537242 atacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaa 3537191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 25754149 - 25754200
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  25754149 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 25754200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 38639623 - 38639572
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  38639623 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 38639572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 53664646 - 53664697
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  53664646 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 53664697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 7435662 - 7435712
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||||||| ||| |||||||||||||| ||||| ||||||||    
T  7435662 atacaattttttagttctccagatgaggaggattttatattatgaagaaaa 7435712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 51686540 - 51686490
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||||||||||||| || ||| |||||| ||||||||    
T  51686540 atacaattttttagttccccaaatgaggggggtttagtattatgaagaaaa 51686490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 20297865 - 20297796
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||| |||| |||||| ||||||||||| ||  ||||  |||||||||||    
T  20297865 agggtgtgtttgtttcaagttataattgttgattcccggaaataaaatgatagaaatgtatatgcctatg 20297796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 27197279 - 27197214
Alignment:
Q  18 ttttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactccc 83  Q
    |||||||||||| |||||||||||| |||||||||| |||||| |   |||||||||||| |||||    
T  27197279 ttttttagttcctcaaatgaggagggttttgtattatgaagaatagttaacccccaaaaccctccc 27197214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 30995896 - 30995803
Alignment:
Q  19 tttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttg 112  Q
    |||||||||||||||||||| ||  |||||||||| |||||||||  |||| || |||| || |  || ||||||| | |||||||||||||||    
T  30995896 tttttagttccccaaatgagtagagttttgtattatgaagaaaaattaacctcccaaacccttctctcccaatatcttctatttcttccatttg 30995803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 31435922 - 31435991
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| |||||||||||||||||||||||| ||||||||  |||||||| ||  ||||  |||||||||||    
T  31435922 agggtgtgtttgtttcaagttatatttgttgattcctgagaataaaatgatagaaatgtatatgcctatg 31435991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 45570990 - 45571051
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||||||||||||||||| ||||||||||| |||  ||||| ||||||||| ||||||||    
T  45570990 atacaattttttagttcccccaaatgaggagggtttaatattatgaagaaaaatgaaccccc 45571051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 12930946 - 12931009
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||||||||  ||| ||||||||||| ||||| |||||| |||||    
T  12930946 gtgtttgtttcaagttata-ttgtagattgttgggaataaaatcataaaaatgcatatggctatg 12931009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 15499346 - 15499406
Alignment:
Q  12 atacaattttttagttc-cccaaatgaggaggattttgtattaggaagaaaaacgaacccc 71  Q
    ||||||||||| ||||| |||||||||||| |||||||||||| ||||||||  |||||||    
T  15499346 atacaatttttgagttctcccaaatgaggaagattttgtattatgaagaaaagtgaacccc 15499406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 24588330 - 24588382
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    ||||||||||| |||||| |||||||||| ||||||||||||| |||||||||    
T  24588330 atacaatttttgagttcctccaaatgagggggattttgtattatgaagaaaaa 24588382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 28770207 - 28770255
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaa 218  Q
    |||||| |||||| |||||||||||||| |||||||||||| |||||||    
T  28770207 taagggtgtgtttctttcaagttatattcgtagattcctgggaataaaa 28770255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 29623270 - 29623166
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccattt 111  Q
    |||||| |||| |||| |||||||||||||| |||||||||| |||||||||  ||||  |||| | ||||| ||  ||| || | ||||||||||| ||    
T  29623270 atacaacttttgagtttcccaaatgaggagggttttgtattatgaagaaaaattaaccatcaaagccctcccctcctaatgtcctctatttcttccactt 29623171  T
Q  112 gctcc 116  Q
    |||||    
T  29623170 gctcc 29623166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 54089501 - 54089601
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccattt 111  Q
    |||||||||||||||| | |||||||| ||  ||||||||||  |||||||| |||  |||||||| ||  | | ||| | |||||||||||||||||||    
T  54089501 atacaattttttagtttctcaaatgagaagagttttgtattataaagaaaaatgaattcccaaaactctttcctttcagtgtcatttatttcttccattt 54089600  T
Q  112 g 112  Q
    |    
T  54089601 g 54089601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 54917792 - 54917744
Alignment:
Q  24 agttccccaaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||||||    
T  54917792 agttccccaaattaggaggattttgtattacgaagaaaaataaaccccc 54917744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 8476303 - 8476354
Alignment:
Q  168 tctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  8476303 tctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 8476354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 16883388 - 16883337
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||| ||| |||||| ||||||||||| |||||| |||||||||    
T  16883388 atacaatttttttgtttcccaaacgaggaggatttggtattatgaagaaaaa 16883337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 20414460 - 20414511
Alignment:
Q  168 tctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||| ||||||||||||||||||| |||| |||| |||| ||||||||    
T  20414460 tctaagggtgtgtttgtttcaagttataattgttgatttctgggaataaaat 20414511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 33908996 - 33909047
Alignment:
Q  12 atacaattttttagtt-ccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||| ||||||||| ||||||||||||||| |||||||||| ||||||||    
T  33908996 atacaactttttagtttccccaaatgaggagggttttgtattatgaagaaaa 33909047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 50948240 - 50948189
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| |||| |||||||| |||||||||| ||||||||    
T  50948240 atacaattttttagttcctccaactgaggagggttttgtattatgaagaaaa 50948189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 24574650 - 24574600
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  24574650 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 24574600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 47114861 - 47114903
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  47114861 gtgtttgtttcaagttataattgttgattcctgggaataaaat 47114903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 49183729 - 49183679
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||||||| |||||||||||||  || |||||| ||||||||    
T  49183729 atacaattttttagttctccaaatgaggagggattagtattatgaagaaaa 49183679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 3707103 - 3707034
Alignment:
Q  47 tgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttgctcc 116  Q
    ||||||| ||||||||| ||||||||||| |  || | ||||||| |||| ||||||||||| |||||||    
T  3707103 tgtattatgaagaaaaatgaacccccaaagccttctcctctcaatgtcatctatttcttccacttgctcc 3707034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 11239119 - 11239188
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  11239119 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11239188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 241
Target Start/End: Complemental strand, 13643122 - 13643073
Alignment:
Q  192 tatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||||||| |||  ||||||||||| |||||||||||| |||||    
T  13643122 tatatttgtagatttctgataataaaatcataaaaatacatatgtctatg 13643073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 26849096 - 26849047
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  26849096 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 26849047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 33193406 - 33193447
Alignment:
Q  30 ccaaatgaggaggattttgtattaggaagaaaaacgaacccc 71  Q
    |||||||||||||||||||| ||| |||||||||| ||||||    
T  33193406 ccaaatgaggaggattttgtgttatgaagaaaaacaaacccc 33193447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 35283121 - 35283060
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||||||||||||||||| ||||||||||| |||| ||||  |||||||||  |||||||    
T  35283121 atacaattttttagttcccccaaatgaggagggttttatattttgaagaaaaattaaccccc 35283060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 40118931 - 40118992
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||||||||||||||||| ||||||||||| |||||| | | |||||||||  |||||||    
T  40118931 atacaattttttagttcccccaaatgaggagggttttgtttaatgaagaaaaattaaccccc 40118992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 44952380 - 44952311
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  44952380 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 44952311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 4247151 - 4247095
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaac 68  Q
    |||||||||||||||| | ||||||| ||| |||| |||||| ||||||||| ||||    
T  4247151 atacaattttttagttactcaaatgaagagaatttagtattatgaagaaaaatgaac 4247095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Complemental strand, 18461013 - 18460985
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgt 200  Q
    |||||||||||||||||||||||||||||    
T  18461013 agggcgtgtttgtttcaagttatatttgt 18460985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 21777683 - 21777747
Alignment:
Q  12 atacaattttttagttc-cccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||||| | ||| ||||||||| |||  |||||||||| ||||||||| |||||||||||    
T  21777683 atacaatttttgatttctcccaaatgatgagagttttgtattatgaagaaaaatgaacccccaaa 21777747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 60
Target Start/End: Complemental strand, 35989150 - 35989102
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaa 60  Q
    |||||||||||||||||||||||| |||||| |||  ||||| ||||||    
T  35989150 atacaattttttagttccccaaattaggagggtttaatattatgaagaa 35989102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 44400743 - 44400639
Alignment:
Q  12 atacaattttttagttc-cccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    |||||||||||||||||  |||||||| |||| |||||||| | ||||||||   |||||||||| | ||||  || || | || ||||||||||||| |    
T  44400743 atacaattttttagttcgtccaaatgaagagggttttgtatcatgaagaaaagttaacccccaaagccctcctctcccattttcctttatttcttccact 44400644  T
Q  111 tgctc 115  Q
    |||||    
T  44400643 tgctc 44400639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 45826849 - 45826801
Alignment:
Q  171 aagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||| ||||||||||||||||||  ||||||||||| || ||||||||    
T  45826849 aagggtgtgtttgtttcaagttatcgttgtagattccagggaataaaat 45826801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 13931888 - 13931952
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||| ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  13931888 gtgtttgtttgaagttatatttgtagattcctaggaataaaatcataaaaatacatatgcctatg 13931952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 52073496 - 52073600
Alignment:
Q  13 tacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccattt 111  Q
    |||||||||| |||||||| ||||||||||| ||||| |||| ||||||||| ||| ||||||| |  |||| ||||||| |||| ||||||||||| ||    
T  52073496 tacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaaatgaaaccccaaagccttcccctctcaatgtcatctatttcttccactt 52073595  T
Q  112 gctcc 116  Q
    |||||    
T  52073596 gctcc 52073600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 1227893 - 1227949
Alignment:
Q  188 aagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatgctt 244  Q
    |||||||||| |||||||| || |||||||||||| |||||||||||||||||||||    
T  1227893 aagttatattcgtagattcttgaaaataaaatcataaaaatacatatgcctatgctt 1227949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 50587063 - 50586976
Alignment:
Q  29 cccaaatgaggaggattttgtattaggaagaaaaacgaa-cccccaaaacactcccttctcaatatcatttatttcttccatttgctcc 116  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||| | ||||| ||||||| || | ||||||||||| |||||||    
T  50587063 cccaaatgaggaggattttgtattatgaagaaaaatgaaccccccaaagccctccc-tctcaatgtcctctatttcttccacttgctcc 50586976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 29091741 - 29091670
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||| |||||||||||||||||||||||| ||||||||  |||||||| || |||||| ||||| |||||    
T  29091741 taagggtgtgtttgtttcaagttatatttgttgattcctgataataaaatgataaaaatatatatgtctatg 29091670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 229
Target Start/End: Complemental strand, 19094187 - 19094129
Alignment:
Q  171 aagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaata 229  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||    
T  19094187 aagggtgtgtttgtttcaagttatatttgtaaattcctggaaatagaatgatggaaata 19094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 23412000 - 23412058
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacc 69  Q
    |||||||||||||||||| ||||||||||||||||||| |||| ||||||||| |||||    
T  23412000 atacaattttttagttcctccaaatgaggaggattttgaattatgaagaaaaatgaacc 23412058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 1278487 - 1278402
Alignment:
Q  31 caaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttgctcc 116  Q
    ||||||||| ||||||||||||  ||||||||| ||||||||||||| ||||| | ||| | || ||||||||||  |||||||||    
T  1278487 caaatgaggcggattttgtattttgaagaaaaatgaacccccaaaaccctcccctttcagtgtcctttatttctttaatttgctcc 1278402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 27102871 - 27102976
Alignment:
Q  12 atacaattttttagtt-ccccaaatgaggaggattttgtattaggaagaaaaacgaacc-cccaaaacactcccttctcaatatcatttatttcttccat 109  Q
    ||||||||||| |||| |||||||||| ||| ||||||||||| ||||||||| ||||| |||||| ||||||| ||  |||||| | |||||||| ||     
T  27102871 atacaatttttgagtttccccaaatgaagagcattttgtattatgaagaaaaatgaacctcccaaagcactcccctccaaatatcttctatttctttcac 27102970  T
Q  110 ttgctc 115  Q
    ||||||    
T  27102971 ttgctc 27102976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 28848836 - 28848933
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    ||||||||||| |||||||| ||||||||||| |||||| ||| ||||||||| ||| ||||||| |  |||| |||||||  ||| |||||||||||    
T  28848836 atacaatttttgagttcccccaaatgaggagggttttgtgttatgaagaaaaatgaaaccccaaagccttcccgtctcaatgccatctatttcttcca 28848933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 5518500 - 5518572
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||| |||||||||||||||||||||||| ||||||  | |||||||| ||  ||||| |||||||||||    
T  5518500 ctaagggtgtgtttgtttcaagttatatttgttgattcccaggaataaaatgatagaaatatatatgcctatg 5518572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 29092120 - 29092056
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||   ||||||||||    
T  29092120 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaa 29092056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 5584539 - 5584488
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  5584539 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 5584488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 17760522 - 17760573
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  17760522 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 17760573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 36269777 - 36269726
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||||| ||||||||||| |||||||||| ||||||||    
T  36269777 atacaattttttagttcccccaaatgaggagggttttgtattatgaagaaaa 36269726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 47037532 - 47037461
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||| |||||||||||    
T  47037532 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatatatatgcctatg 47037461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 62
Target Start/End: Original strand, 51839229 - 51839280
Alignment:
Q  11 catacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||||||||| ||||| ||||||||||||||||  ||||||||    
T  51839229 catacaattttttagttcctcaaattaggaggattttgtattttgaagaaaa 51839280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 31806760 - 31806802
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  31806760 gtgtttgtttcaagttatatttgtagattcctgagaataaaat 31806802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 32287614 - 32287564
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||| ||||||| ||||||| ||||||||    
T  32287614 atacaattttttagttcctcaaatgaagaggattgtgtattaagaagaaaa 32287564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 41432813 - 41432916
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacg-aacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    |||||| |||| ||| ||||||||||||||| |||| ||||| ||||||||| | |||||||||| |  ||||  |||||| |||| ||||||||||| |    
T  41432813 atacaaattttgagtcccccaaatgaggagggttttatattatgaagaaaaatgaaacccccaaagccttccc--ctcaatgtcatatatttcttccact 41432910  T
Q  111 tgctcc 116  Q
    ||||||    
T  41432911 tgctcc 41432916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 52699472 - 52699534
Alignment:
Q  179 gtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||   |||||| |||||||||    
T  52699472 gtttgtttcaagttatattcgtagattcctgggaataaaatgataggaatacacatgcctatg 52699534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 36886900 - 36886799
Alignment:
Q  15 caattttttagttccccaaa-tgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttgc 113  Q
    |||||||||||||||||||| ||||| || ||| |||||| ||||||||   |||||||||| | ||||| ||||| | || | ||||||||||| ||||    
T  36886900 caattttttagttccccaaaatgaggggggtttagtattatgaagaaaagttaacccccaaagccctcccctctcattttcctctatttcttccacttgc 36886801  T
Q  114 tc 115  Q
    ||    
T  36886800 tc 36886799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 34552133 - 34552197
Alignment:
Q  11 catacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||||||||||||| |||||||||||| |||| ||||   ||||||||  ||||||||||    
T  34552133 catacaattttttagttcctcaaatgaggagggttttatattttaaagaaaaataaacccccaaa 34552197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 38519066 - 38519106
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaa 217  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  38519066 gtgtttgtttcaagttatatttgtagatttttggaaataaa 38519106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 41817346 - 41817410
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    |||||||||||||||||| |||||||| |||| |||||||||| ||||||||   ||||||||||    
T  41817346 atacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaagttaacccccaaa 41817410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 42333678 - 42333582
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    |||||| | |||||||||| ||||||||||| |||||||||| |||||||||  ||| || ||| | ||| ||| ||||| |  |||||||||||||    
T  42333678 atacaactctttagttccctaaatgaggagggttttgtattatgaagaaaaattaacgcctaaacccctctcttttcaatgtactttatttcttcca 42333582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 11014448 - 11014487
Alignment:
Q  180 tttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  11014448 tttgtttcaagttatatatgtagattcctgggaataaaat 11014487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 34154375 - 34154426
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||| | |||||||||| ||||||||    
T  34154375 atacaattttttagttcctccaaatgaggaaggttttgtattatgaagaaaa 34154426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 37649663 - 37649714
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| ||||||||||  |||||||    
T  37649663 atacaattttttagttcctccaaatgaggagggttttgtattataaagaaaa 37649714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 39886972 - 39887078
Alignment:
Q  12 atacaattttttagttccc--caaatgaggaggattttgtattaggaagaaaaacgaacc-cccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    |||||||||||||||||||  |||||||||||| ||| |||||| ||||||||   |||| |||||| | ||||| ||||| |  | |||||||||||||    
T  39886972 atacaattttttagttcccaccaaatgaggagggtttagtattatgaagaaaagttaaccacccaaagccctcccctctcatttccctttatttcttcca 39887071  T
Q  109 tttgctc 115  Q
     ||||||    
T  39887072 cttgctc 39887078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 46001600 - 46001549
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||| ||||| ||||||||    
T  46001600 atacaattttttagttcctccaaatgaggagggttttatattatgaagaaaa 46001549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 47677715 - 47677653
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatg 235  Q
    |||| |||||||||||  ||||||||||| |||||| || ||||||||||| ||||||||||||    
T  47677715 agggtgtgtttgtttcccgttatatttgtggattcc-gggaataaaatcataaaaatacatatg 47677653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 47742566 - 47742467
Alignment:
Q  12 atacaattttttagtt-ccccaaatgaggaggattt-tgtattaggaagaaaaacgaacccccaaaa-cactcccttctcaatatcatttatttcttcca 108  Q
    |||||| ||||||||| |||| |||||||||| ||| ||||||||||| |||||  ||||||| ||| | ||||||||||||| || | |||||||||||    
T  47742566 atacaactttttagtttccccgaatgaggagggtttatgtattaggaacaaaaattaaccccccaaagccctcccttctcaatgtcctctatttcttcca 47742467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 52068184 - 52068235
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||  |||||||||| ||||||||    
T  52068184 atacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaa 52068235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 52630846 - 52630799
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||| ||||||||||||||||||| |||| ||||||||| ||||||||    
T  52630846 agggtgtgtttgtttcaagttataattgttgattcctgggaataaaat 52630799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 69767 - 69717
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| |||| ||||||| ||| |||||| ||||||||    
T  69767 atacaattttttagttcctcaaacgaggagggtttagtattatgaagaaaa 69717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 3572561 - 3572611
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  3572561 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 3572611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 5806287 - 5806337
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  5806287 ctaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 5806337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 9595608 - 9595558
Alignment:
Q  13 tacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||||||||| |||| ||| ||||||||||||| ||||||||    
T  9595608 tacaattttttagttcccccaaattagggggattttgtattatgaagaaaa 9595558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 20260090 - 20260132
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  20260090 gtgtttgtttcaagttataattgttgattcctgggaataaaat 20260132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 30241075 - 30241013
Alignment:
Q  179 gtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||||||||||||||| ||||  ||| |||||||| ||  ||||| |||||||||||    
T  30241075 gtttgtttcaagttatatttgttgatttttggtaataaaatgatagaaatatatatgcctatg 30241013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 32202327 - 32202377
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||| ||||||||||||||||||| |||| |||||| | |||||||||    
T  32202327 ctaagggtgtgtttgtttcaagttataattgttgattcccgaaaataaaat 32202377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 34749694 - 34749648
Alignment:
Q  17 attttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    ||||||||||| |||||||||||| | |||||||||| |||||||||    
T  34749694 attttttagtttcccaaatgaggacgtttttgtattatgaagaaaaa 34749648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 1688264 - 1688305
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatta 53  Q
    ||||||||||| |||||||||||||||| ||||||| |||||    
T  1688264 atacaatttttgagttccccaaatgagggggattttttatta 1688305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 2632927 - 2632878
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  2632927 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 2632878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 6911570 - 6911497
Alignment:
Q  168 tctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||| ||||||||||||||||||| |||| |||||  || |||||||| || | |||  |||||||||||    
T  6911570 tctaagggtgtgtttgtttcaagttataattgttgattctcgggaataaaatgataagaatgtatatgcctatg 6911497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 6978843 - 6978774
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  6978843 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 6978774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 9115910 - 9115841
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  9115910 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 9115841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 24116341 - 24116382
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaa 218  Q
    |||||||||||| ||||||||||||||||||||  |||||||    
T  24116341 gtgtttgtttcaggttatatttgtagattcctgagaataaaa 24116382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 33579268 - 33579227
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatta 53  Q
    |||||| |||| ||||||||||||||||||| ||||||||||    
T  33579268 atacaacttttgagttccccaaatgaggagggttttgtatta 33579227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 33854893 - 33854982
Alignment:
Q  19 tttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccc-caaaacactcccttctcaatatcatttatttcttcc 107  Q
    ||||||||| ||||| ||| |||| |||||||||| |||||||||  |||||  |||||||||||| ||  |||||| | ||||||||||    
T  33854893 tttttagtttcccaattgaagagggttttgtattatgaagaaaaattaaccctgcaaaacactcccctcctaatatcctctatttcttcc 33854982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 107
Target Start/End: Complemental strand, 33926029 - 33925940
Alignment:
Q  19 tttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccc-caaaacactcccttctcaatatcatttatttcttcc 107  Q
    ||||||||| ||||| ||| |||| |||||||||| |||||||||  |||||  |||||||||||| ||  |||||| | ||||||||||    
T  33926029 tttttagtttcccaattgaagagggttttgtattatgaagaaaaattaaccctgcaaaacactcccctcctaatatcctctatttcttcc 33925940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 34738329 - 34738284
Alignment:
Q  32 aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaac 77  Q
    |||||| ||||||||||||||| ||||||||| ||||| |||||||    
T  34738329 aaatgaagaggattttgtattatgaagaaaaatgaacctccaaaac 34738284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 46666783 - 46666734
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  46666783 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 46666734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 52331082 - 52331001
Alignment:
Q  13 tacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatat 93  Q
    |||||||||| ||||||  |||||||||| |||||||||||| |||||||||  ||| | |||||  |||||||| ||||||    
T  52331082 tacaatttttaagttcctacaaatgaggatgattttgtattatgaagaaaaataaactctcaaaattctcccttcccaatat 52331001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 9011167 - 9011207
Alignment:
Q  179 gtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||||||||||| |||||||| || |||||||||    
T  9011167 gtttgtttcaagttatattcgtagattcttgaaaataaaat 9011207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 16257012 - 16257064
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaata 229  Q
    |||||||||| |||||||||||||| ||| || | ||||||||||| ||||||    
T  16257012 gtgtttgtttgaagttatatttgtatatttcttggaataaaatcataaaaata 16257064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 25789831 - 25789767
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  25789831 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 25789767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 37336458 - 37336498
Alignment:
Q  179 gtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||||||||||||| ||  ||||||||    
T  37336458 gtttgtttcaagttatatttgtagattcatgataataaaat 37336498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 38964677 - 38964725
Alignment:
Q  171 aagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  38964677 aagggggtgtttgtttcaagttataattgttgattcccgggaataaaat 38964725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 39930525 - 39930461
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  39930525 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39930461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 50084158 - 50084118
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatt 52  Q
    |||||||||||||||||||||||||| |||| |||| ||||    
T  50084158 atacaattttttagttccccaaatgacgagggttttatatt 50084118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 50476572 - 50476520
Alignment:
Q  12 atacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaa 63  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||| ||| |||||    
T  50476572 atacaatttttgagttccctcaaatgagggggattttgtattatgaataaaaa 50476520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 31149946 - 31149886
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  31149946 atacaactttttagttccccaaatgaggatgattttgtattaggaagaaaaattaaccccc 31149886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 25899699 - 25899635
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||| || |||||    
T  25899699 gtgtttgtttcaaattatatttgtagattcctgggaataaaatcataaaaatgcatgtgtctatg 25899635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 23932605 - 23932702
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||   |||||||||| | ||||  ||||| | || | |||||||||||    
T  23932605 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctcctctctcattttcctctatttcttcca 23932702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 16024600 - 16024660
Alignment:
Q  12 atacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaacgaacccc 71  Q
    ||||||||||| ||||||| ||||| || |||||||||||||| |||||||||||||||||    
T  16024600 atacaatttttgagttcccacaaattagtaggattttgtattatgaagaaaaacgaacccc 16024660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 33444630 - 33444694
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||||||||||||||||| ||||||||  |||||||| || |||||| ||||| |||||    
T  33444630 gtgtttgtttcaagttatatttgttgattcctgagaataaaatgataaaaatatatatgtctatg 33444694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 241
Target Start/End: Original strand, 43871971 - 43872034
Alignment:
Q  178 tgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||||||||||| || ||||||| ||||||||||||||| |||| | | |||||||||    
T  43871971 tgtttgtttcaagttataattatagattcttggaaataaaatcataaaaacatacatgcctatg 43872034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 43239703 - 43239653
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||| ||||||||||||||||| |||||| ||| ||||||||    
T  43239703 atacaattttttaattccccaaatgaggaggcttttgtgttatgaagaaaa 43239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 32660930 - 32660979
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| ||||||||| ||||||||    
T  32660930 taagggtgtgtttgtttcaagttataattgttgattcctgggaataaaat 32660979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 35376674 - 35376779
Alignment:
Q  12 atacaatttttt-agttcccc-aaatgaggaggattttgtattaggaagaaaaacgaa-cccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    |||||||||||| |||||||| ||||||||| |||||||||| | ||||||||| ||| |||||||| | ||||| | ||||| || |||||||| ||||    
T  35376674 atacaattttttcagttcccccaaatgaggaagattttgtatcatgaagaaaaatgaaccccccaaagctctcccctttcaatgtcctttatttcgtcca 35376773  T
Q  109 tttgct 114  Q
     |||||    
T  35376774 cttgct 35376779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 5911473 - 5911513
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatt 52  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  5911473 atacaattttttagttccccaaatgaggagggttttatatt 5911513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 11229270 - 11229322
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||||| |||||||| || |||||||||||| |||||||||    
T  11229270 atacaattttttagttcctccaaatgacgaagattttgtattatgaagaaaaa 11229322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 235
Target Start/End: Complemental strand, 15227029 - 15226973
Alignment:
Q  179 gtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatg 235  Q
    ||||||||||||||||||| ||||||||||   |||||||||||  |||||||||||    
T  15227029 gtttgtttcaagttatattcgtagattcctctgaataaaatcatataaatacatatg 15226973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 21137136 - 21137200
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||||||| ||||||||||||| ||||||||  |||||||| ||  ||||| |||||||||||    
T  21137136 gtgtttgtttgaagttatatttgttgattcctgagaataaaataatagaaatatatatgcctatg 21137200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 75
Target Start/End: Original strand, 21173909 - 21173969
Alignment:
Q  16 aattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||   ||||||||||    
T  21173909 aattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaa 21173969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 40985121 - 40985173
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaa 63  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||| |||||    
T  40985121 atacaatttttgagttcccccaaatgaggaggattttgtattatgaataaaaa 40985173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 42755934 - 42755870
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||| ||||||||| |||||||| ||  ||||  |||||||||||    
T  42755934 gtgtttgtttcaagttataattgttgattcctgggaataaaatgatagaaatgtatatgcctatg 42755870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 43733167 - 43733219
Alignment:
Q  12 atacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaa 63  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||| |||||    
T  43733167 atacaattttttaattccctcaaatgaggaggattttgtattatgaataaaaa 43733219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 44879580 - 44879516
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaa 76  Q
    ||||||||||||||||||| |||||||||| |||||| || | |||||||||   ||||||||||    
T  44879580 atacaattttttagttccctaaatgaggagaattttgaatcatgaagaaaaatacacccccaaaa 44879516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 44880341 - 44880405
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaa 76  Q
    ||||||||||||||||||| |||||||||| |||||| || | |||||||||   ||||||||||    
T  44880341 atacaattttttagttccctaaatgaggagaattttgaatcatgaagaaaaatacacccccaaaa 44880405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 79660 - 79711
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||||| ||||||||||| ||| |||||| ||||||||    
T  79660 atacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaa 79711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 3394012 - 3393953
Alignment:
Q  16 aattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||| ||||| | ||||||||||||||||||||||  |||||||| ||| |||||||    
T  3394012 aatttttgagttctctaaatgaggaggattttgtattataaagaaaaatgaatccccaaa 3393953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 22330724 - 22330673
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    ||||||||||||||||||  ||| |||||| ||||||||||| |||||||||    
T  22330724 atacaattttttagttcctaaaaagaggagaattttgtattatgaagaaaaa 22330673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 41455290 - 41455239
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||| |||||||||||||| |||| ||||  |||||||||    
T  41455290 atacaattttttagtttcccaaatgaggagggttttatattttgaagaaaaa 41455239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 4428900 - 4428858
Alignment:
Q  33 aatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||    
T  4428900 aatgaggaggattttgtattatgaagaaaaaagaagccccaaa 4428858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 5020494 - 5020536
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||||||||| ||||| ||| ||||||||    
T  5020494 gtgtttgtttcaagttatatttgttgattcatgggaataaaat 5020536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 7931306 - 7931264
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||    
T  7931306 gtgtttgtttcaagttataattgttgattcctgggaataaaat 7931264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 8228567 - 8228517
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||| ||||||||||||||||||||| |||| |||||||||| ||| ||||    
T  8228567 atacgattttttagttccccaaatgatgagggttttgtattatgaaaaaaa 8228517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 8950379 - 8950329
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||||||  |||||| | ||||||||||||||| ||||||||    
T  8950379 atacaattttttagttttccaaattacgaggattttgtattatgaagaaaa 8950329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 12710717 - 12710648
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  12710717 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 12710648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 34336071 - 34335971
Alignment:
Q  15 caattttttagttccc-caaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttgc 113  Q
    |||||||||||||||| |||||||||||| ||| |||| | ||||||||   |||||||||| | ||||| || || | || ||||||||||||| ||||    
T  34336071 caattttttagttccctcaaatgaggagg-tttagtatcatgaagaaaagttaacccccaaagccctcccctcccattttcctttatttcttccacttgc 34335973  T
Q  114 tc 115  Q
    ||    
T  34335972 tc 34335971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 40197081 - 40197122
Alignment:
Q  178 tgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||| |||| |||||| |||||||||||    
T  40197081 tgtttgtttcaagttataattgttgattcccggaaataaaat 40197122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 7317448 - 7317412
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagatt 205  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  7317448 ctaagggtgtgtttgtttcaagttatatttgttgatt 7317412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 41866164 - 41866268
Alignment:
Q  12 atacaattttttagtt-ccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    |||||||||||||||| |||||||| |||||| |||  ||||| ||||||||   || |||| |||| ||||| || || | || ||||||||||||| |    
T  41866164 atacaattttttagtttccccaaataaggagggtttaatattatgaagaaaagttaatccccgaaaccctcccctcccattttcctttatttcttccact 41866263  T
Q  111 tgctc 115  Q
    |||||    
T  41866264 tgctc 41866268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 43438341 - 43438405
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaa 76  Q
    ||||||||||| |||||| |||||| | || |||||||||||  |||||||| ||||| ||||||    
T  43438341 atacaatttttgagttcctcaaatgggaagaattttgtattataaagaaaaatgaacctccaaaa 43438405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 3564 - 3633
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||||||||||||| || | |||||||| || |||||| |||||||||||    
T  3564 agggtgtgtttgtttcaagttatatttgtagatttctaggaataaaattataaaaatatatatgcctatg 3633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 4540 - 4471
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||||||||||||| || | |||||||| || |||||| |||||||||||    
T  4540 agggtgtgtttgtttcaagttatatttgtagatttctaggaataaaattataaaaatatatatgcctatg 4471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 14676257 - 14676152
Alignment:
Q  11 catacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccat 109  Q
    |||||||||||| ||||||| |||||||||||||||| ||||||  |||||||| ||||| ||||| |  ||||  |||||| |||| |||||||||||     
T  14676257 catacaatttttgagttcccacaaatgaggaggatttagtattataaagaaaaatgaacctccaaagccttccccactcaatctcatatatttcttccac 14676158  T
Q  110 ttgctc 115  Q
    ||||||    
T  14676157 ttgctc 14676152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 32820278 - 32820382
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccattt 111  Q
    |||||| |||||||||||||||| |||||  |||||||||||||||||||||  |||||| ||||| ||||| |  |||| |  | ||||||||||| ||    
T  32820278 atacaactttttagttccccaaacgaggataattttgtattaggaagaaaaattaacccctaaaaccctccccttccaatgtactatatttcttccactt 32820377  T
Q  112 gctcc 116  Q
    |||||    
T  32820378 gctcc 32820382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 37534107 - 37534157
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaa 227  Q
    |||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  37534107 gtgtttgtttcatgttataattgtagattcctggaaataaaatcataaaaa 37534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 23551683 - 23551595
Alignment:
Q  20 ttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    ||||||||||| |||||||||||  ||||||||| |||||||||| |||||  ||| | ||||| || |||| || |||||||||||||    
T  23551683 ttttagttcccaaaatgaggagggctttgtattatgaagaaaaactaacccttaaatccctcccctcccaatgtcctttatttcttcca 23551595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 46442740 - 46442692
Alignment:
Q  14 acaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||    
T  46442740 acaattttttagctccccaaatgatgaggattttgtattatgaagaaaa 46442692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 4788049 - 4788100
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||||||||||| |||| |||||| ||||| |||||||||    
T  4788049 atacaattttttagttccccaaataaggatgattttatattatgaagaaaaa 4788100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 11000775 - 11000728
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  11000775 agggtgtgtttgtttcaagttatatatgttgattcctggaaataaaat 11000728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 15748996 - 15749047
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  15748996 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 15749047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 45440984 - 45440925
Alignment:
Q  168 tctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaa 227  Q
    |||| ||| ||||||||||||||||||| |||||||||| ||| ||||||||||| ||||    
T  45440984 tctatgggtgtgtttgtttcaagttataattgtagattcttgggaataaaatcataaaaa 45440925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 45940447 - 45940498
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  45940447 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 45940498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 19791724 - 19791674
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||||||||||||| || ||| |||||| ||||||||    
T  19791724 atacaattttttagttccccaaatgaggtgggtttagtattatgaagaaaa 19791674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 241
Target Start/End: Complemental strand, 18824221 - 18824148
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcat-gaaaatacatatgcctatg 241  Q
    ||||||| |||||||||||||||| ||||||| ||||  ||| |||||||| || ||||||| |||||||||||    
T  18824221 ctaagggtgtgtttgtttcaagttgtatttgttgatttttgggaataaaatgatagaaaatatatatgcctatg 18824148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 24924627 - 24924684
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacc 69  Q
    ||||||||||  |||||| |||||||||||| |||||||||| ||||||||| |||||    
T  24924627 atacaattttcaagttcctcaaatgaggagggttttgtattatgaagaaaaatgaacc 24924684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 38137958 - 38137917
Alignment:
Q  28 ccccaaatgaggaggattttgtattaggaagaaaaacgaacc 69  Q
    |||||||||||||||||||||||||| ||||||||| |||||    
T  38137958 ccccaaatgaggaggattttgtattatgaagaaaaatgaacc 38137917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 39554263 - 39554186
Alignment:
Q  164 aaagtctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  39554263 aaagactaagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 39554186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 13697316 - 13697264
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| |||||||||    
T  13697316 atacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaa 13697264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 21018741 - 21018793
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||||||    
T  21018741 atacaattttttagttcctccaaacgaggaggattctgtattatgaagaaaaa 21018793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 31055408 - 31055368
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtatt 52  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  31055408 atacaattttttagttccccaaatgaggagggttttatatt 31055368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 33187893 - 33187945
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaac 64  Q
    |||||||||||||||||| |||||||||| |||||| ||||  ||||||||||    
T  33187893 atacaattttttagttcctcaaatgaggatgattttatattttgaagaaaaac 33187945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 42113006 - 42113066
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||| |||||||||||||||||||||||  ||| |||||| |||||||||  |||||||    
T  42113006 atacaactttttagttccccaaatgaggagagtttagtattatgaagaaaaattaaccccc 42113066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 2826294 - 2826345
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||||| ||||||||||| ||| |||||| ||||||||    
T  2826294 atacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaa 2826345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 38505381 - 38505432
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||| ||||||||| ||||||||||| |||||||||| ||||||||    
T  38505381 atacaattttatagttcccccaaatgaggagggttttgtattatgaagaaaa 38505432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 4125981 - 4125932
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||| |||||||||| ||||||||||||||| |||||| ||||||||    
T  4125981 atacaattgtttagttccc-aaatgaggaggatttagtattatgaagaaaa 4125932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 6656228 - 6656270
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||||||||| ||||  ||||||||||||    
T  6656228 gtgtttgtttcaagttatatttgttgatttttggaaataaaat 6656270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 27213853 - 27213923
Alignment:
Q  171 aagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  27213853 aagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 27213923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 30685996 - 30686046
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaa 227  Q
    ||||||||||||||||||| |||||||||| | | ||||||||||| ||||    
T  30685996 gtgtttgtttcaagttataattgtagattcgttggaataaaatcataaaaa 30686046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 31921744 - 31921813
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgccta 239  Q
    ||||||| ||||||||||||||||||||||||  ||| | ||||||||||| ||  ||||| |||||||||    
T  31921744 ctaagggtgtgtttgtttcaagttatatttgttcatttc-ggaaataaaatgatagaaatatatatgccta 31921813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 38544261 - 38544219
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||||||||||| |||| |||||| |||||||||||    
T  38544261 gtgtttgtttcaagttataattgttgattcccggaaataaaat 38544219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 41471480 - 41471422
Alignment:
Q  15 caattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    |||||||| |||||||| |||||||||||||||||||||   |||||||| ||||||||    
T  41471480 caatttttcagttcccccaaatgaggaggattttgtattcttaagaaaaatgaaccccc 41471422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 42253988 - 42253942
Alignment:
Q  16 aattttttagttcc-ccaaatgaggaggattttgtattaggaagaaa 61  Q
    |||||||||||||| ||||||||||||| |||||||||| |||||||    
T  42253988 aattttttagttcctccaaatgaggagggttttgtattatgaagaaa 42253942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 7347939 - 7348039
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccattt 111  Q
    ||||||||||| |||||||||||||| ||   |||||||||   |||||||  |||||| |||||| || || ||||||| |||| ||||||||||| ||    
T  7347939 atacaatttttaagttccccaaatgatgaaagttttgtattcttaagaaaagtgaaccctcaaaac-cttccctctcaatgtcatctatttcttccactt 7348037  T
Q  112 gc 113  Q
    ||    
T  7348038 gc 7348039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 8419586 - 8419635
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  8419586 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 8419635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 11330065 - 11329996
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  11330065 agggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 11329996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 23466044 - 23466105
Alignment:
Q  12 atacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    ||||||||| | ||||||| |||||||||||| ||||||||||  |||||||| ||||||||    
T  23466044 atacaatttgtgagttccctcaaatgaggagggttttgtattataaagaaaaatgaaccccc 23466105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 34670212 - 34670179
Alignment:
Q  29 cccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||||||||||||||| ||||||||    
T  34670212 cccaaatgaggaggattttgtattatgaagaaaa 34670179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 209
Target Start/End: Original strand, 41684021 - 41684058
Alignment:
Q  172 agggcgtgtttgtttcaagttatatttgtagattcctg 209  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  41684021 agggtgtgtttgtttcaagttatatttgttgattcctg 41684058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 42622395 - 42622330
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaac 77  Q
    |||||| |||||||||||| ||||||| | |||||||||| | ||||||| |  ||||||||||||    
T  42622395 atacaactttttagttccctaaatgagaatgattttgtatgatgaagaaatattaacccccaaaac 42622330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 44858149 - 44858198
Alignment:
Q  13 tacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||||||||||||||| |||||||||| ||| || ||| ||||||||    
T  44858149 tacaattttttagttcccccaatgaggagggtttagttttatgaagaaaa 44858198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 6656477 - 6656517
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaa 217  Q
    |||||||||||||||||||||||| ||||  ||||||||||    
T  6656477 gtgtttgtttcaagttatatttgttgatttttggaaataaa 6656517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 32429977 - 32430081
Alignment:
Q  12 atacaattttttagttccccaaa-tgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatt 110  Q
    ||||| ||||| ||||||||||| ||| |||||||||| |||| |||||||||  |||| ||||||   | || |||||| ||||| ||||||||| | |    
T  32429977 atacattttttgagttccccaaattgaagaggattttgcattacgaagaaaaataaacctccaaaatctttccctctcaacatcatctatttcttctact 32430076  T
Q  111 tgctc 115  Q
    |||||    
T  32430077 tgctc 32430081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 33872158 - 33872222
Alignment:
Q  12 atacaattttttagttcccc-aaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||| |||||||||| ||||||||||| ||| |||||| ||||||||   ||||||||||    
T  33872158 atacaatttgttagttcccccaaatgaggagggtttagtattatgaagaaaagttaacccccaaa 33872222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 41632368 - 41632432
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||| ||||||||  |||||||| ||  ||||  |||||||||||    
T  41632368 gtgtttgtttcaagttataattgttgattcctgagaataaaatgatagaaatgtatatgcctatg 41632432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 43445890 - 43445950
Alignment:
Q  180 tttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctat 240  Q
    ||||||||||||||||||| ||||||| ||  |||||||| || |||||  ||||||||||    
T  43445890 tttgtttcaagttatatttatagattcttgcgaataaaattataaaaatgtatatgcctat 43445950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 43949312 - 43949248
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  43949312 gtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 43949248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 47246070 - 47246110
Alignment:
Q  179 gtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||||||| |||||||||||||||| | ||||||||||    
T  47246070 gtttgtttcaaattatatttgtagattcttagaaataaaat 47246110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 33590375 - 33590425
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||    
T  33590375 atacaattttttagctccccaaatgaggagggttttgtattatgaagaaaa 33590425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 32719423 - 32719520
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttcca 108  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||   |||||||||| | |||| ||| || | || | |||||||||||    
T  32719423 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaagccctcctttcccattttcctctatttcttcca 32719520  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 1567315 - 1567264
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  1567315 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 1567264  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 13380575 - 13380469
Alignment:
Q  12 atacaattttttagttcccc--aaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccat 109  Q
    ||||||||||| ||||||||  ||||||||| |||||| ||||| ||||||||| |||| |||||| |  |||| ||| || ||||| ||| |||||||     
T  13380575 atacaatttttgagttccccccaaatgaggatgattttatattatgaagaaaaatgaactcccaaagccttcccctcttaacatcatctatctcttccac 13380476  T
Q  110 ttgctcc 116  Q
    |||||||    
T  13380475 ttgctcc 13380469  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 3869580 - 3869530
Alignment:
Q  169 ctaagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    ||||||| |||||||||||||||||| |||||||||| |||| ||||||||    
T  3869580 ctaagggtgtgtttgtttcaagttatttttgtagatttctgggaataaaat 3869530  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 8029407 - 8029336
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    |||||| ||||||||||||||||||| |||| |||||| || |||||||| ||  ||||  |||||||||||    
T  8029407 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaatgatagaaatgtatatgcctatg 8029336  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 26713897 - 26713862
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggatttt 47  Q
    ||||||||||| ||||||||||||||||||||||||    
T  26713897 atacaatttttgagttccccaaatgaggaggatttt 26713862  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 10849787 - 10849829
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||    
T  10849787 gtgtttgtttcaagttatttttatagattcctgggaataaaat 10849829  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 238
Target Start/End: Original strand, 21008035 - 21008089
Alignment:
Q  184 tttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcct 238  Q
    ||||||||||||||||| |||| |||| |||||||| || |||||| ||||||||    
T  21008035 tttcaagttatatttgttgatttctgggaataaaatgataaaaatatatatgcct 21008089  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 24874982 - 24875083
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccattt 111  Q
    ||||||| |||||||||||||||||||| || ||| |||||| ||||||||    ||||||||| | ||||| || || | || | ||||||||||||||    
T  24874982 atacaatgttttagttccccaaatgagg-gggtttagtattatgaagaaaagttgacccccaaagccctcccctcccattttcttatatttcttccattt 24875080  T
Q  112 gct 114  Q
    |||    
T  24875081 gct 24875083  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 2657774 - 2657725
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  2657774 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 2657725  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 4464979 - 4464914
Alignment:
Q  12 atacaattttttagttccccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaaac 77  Q
    ||||||||||||||||||||||||||||| | || | ||||  |||||||||  | ||||||||||    
T  4464979 atacaattttttagttccccaaatgaggaaggttgtatattttgaagaaaaataagcccccaaaac 4464914  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 7053567 - 7053616
Alignment:
Q  170 taagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaat 219  Q
    |||||| ||||||||||||||||||| |||| |||||| || ||||||||    
T  7053567 taagggtgtgtttgtttcaagttataattgttgattcccgggaataaaat 7053616  T

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Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 18897988 - 18897924
Alignment:
Q  177 gtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaatacatatgcctatg 241  Q
    ||||||||||||||||||| |||| |||||| ||||||||| | ||  ||||  |||||||||||    
T  18897988 gtgtttgtttcaagttataattgttgattcccggaaataaagtgatagaaatgtatatgcctatg 18897924  T

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Target: scaffold0245 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 4164 - 4079
Alignment:
Q  31 caaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttgctcc 116  Q
    ||||||||| ||||||||||||  ||||||||| ||||||||||||| ||||| | ||| | || ||||||||||  |||||||||    
T  4164 caaatgaggcggattttgtattttgaagaaaaatgaacccccaaaaccctcccctttcagtgtcctttatttctttaatttgctcc 4079  T

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Target: scaffold0229 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 4495 - 4410
Alignment:
Q  31 caaatgaggaggattttgtattaggaagaaaaacgaacccccaaaacactcccttctcaatatcatttatttcttccatttgctcc 116  Q
    ||||||||| ||||||||||||  ||||||||| ||||||||||||| ||||| | ||| | || ||||||||||  |||||||||    
T  4495 caaatgaggcggattttgtattttgaagaaaaatgaacccccaaaaccctcccctttcagtgtcctttatttctttaatttgctcc 4410  T

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Target: scaffold0128 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 26413 - 26362
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  26413 atacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaa 26362  T

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Target: scaffold1480 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1480
Description:

Target: scaffold1480; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 229
Target Start/End: Original strand, 383 - 441
Alignment:
Q  171 aagggcgtgtttgtttcaagttatatttgtagattcctggaaataaaatcatgaaaata 229  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||| ||| ||| |||||    
T  383 aagggtgtgtttgtttcaagttatctttgtaaattcctggaaatagaatgatggaaata 441  T

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Target: scaffold0991 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 3283 - 3241
Alignment:
Q  12 atacaatttttta-gttccccaaatgaggaggattttgtatta 53  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  3283 atacaattttttaagttccccaaatgaggaggattttgtatta 3241  T

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Target: scaffold0519 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 7549 - 7497
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaa 63  Q
    |||||||||||||||||| |||||||| || |||||||||||| |||||||||    
T  7549 atacaattttttagttcctccaaatgacgaagattttgtattatgaagaaaaa 7497  T

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Target: scaffold0248 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 243 - 307
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    |||||||||||||||||| |||||| |||||| |||||||||| ||||||||   ||||||||||    
T  243 atacaattttttagttcctccaaataaggagggttttgtattatgaagaaaagttaacccccaaa 307  T

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Target: scaffold0136 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 2070 - 2134
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaacccccaaa 75  Q
    ||||||||||| |||||| ||||||||||||| |||||||||| ||||||||   ||||||||||    
T  2070 atacaatttttcagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccccaaa 2134  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 740 - 788
Alignment:
Q  14 acaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||| |||||||||| |||||||||||| |||||||||| ||||||||    
T  740 acaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaa 788  T

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Target: scaffold0051; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 3617 - 3665
Alignment:
Q  14 acaattttttagttccccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||| |||||||||| |||||||||||| |||||||||| ||||||||    
T  3617 acaatgttttagttcctcaaatgaggagggttttgtattatgaagaaaa 3665  T

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Target: scaffold0051; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 6804 - 6855
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||| |||||||||| ||||||||||||| |||||||||| ||||||||    
T  6804 atacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaa 6855  T

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Target: scaffold0051; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Original strand, 7787 - 7838
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    ||||||| |||||||||| ||||||||||||| |||||||||| ||||||||    
T  7787 atacaatgttttagttcctccaaatgaggagggttttgtattatgaagaaaa 7838  T

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Target: scaffold0031 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 82
Target Start/End: Original strand, 93553 - 93625
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaaacgaa-cccccaaaacactcc 82  Q
    |||||||||||||||||| ||||||||||||  |||||||||| ||||||||   || |||||||||||||||    
T  93553 atacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaagttaaccccccaaaacactcc 93625  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 29278 - 29227
Alignment:
Q  12 atacaattttttagttcc-ccaaatgaggaggattttgtattaggaagaaaa 62  Q
    |||||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  29278 atacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaa 29227  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 82830 - 82769
Alignment:
Q  12 atacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaaacgaaccccc 72  Q
    ||||||||||  ||||||| ||||| ||||||||||||||||| |||||||||  |||||||    
T  82830 atacaattttggagttccctcaaattaggaggattttgtattatgaagaaaaataaaccccc 82769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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