View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5335_low_29 (Length: 244)

Name: NF5335_low_29
Description: NF5335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5335_low_29
NF5335_low_29
[»] chr2 (58 HSPs)
chr2 (18-139)||(39821668-39821789)
chr2 (149-244)||(39820000-39820095)
chr2 (18-141)||(36347665-36347787)
chr2 (18-120)||(15224818-15224920)
chr2 (137-244)||(39913433-39913540)
chr2 (18-120)||(8426995-8427097)
chr2 (18-103)||(19566945-19567030)
chr2 (135-244)||(39925149-39925258)
chr2 (18-141)||(35736173-35736295)
chr2 (18-103)||(23748130-23748215)
chr2 (18-119)||(39732853-39732953)
chr2 (139-235)||(15803341-15803437)
chr2 (18-120)||(36566975-36567078)
chr2 (18-112)||(2241436-2241530)
chr2 (183-235)||(14385249-14385301)
chr2 (18-87)||(37740015-37740085)
chr2 (70-120)||(40022549-40022599)
chr2 (18-120)||(41778791-41778893)
chr2 (50-119)||(887266-887335)
chr2 (18-87)||(7681299-7681368)
chr2 (18-63)||(16565852-16565897)
chr2 (67-120)||(23748268-23748321)
chr2 (18-99)||(31795893-31795974)
chr2 (18-118)||(9427005-9427105)
chr2 (33-120)||(36046341-36046427)
chr2 (18-81)||(40022427-40022490)
chr2 (193-231)||(5321998-5322036)
chr2 (22-103)||(12541800-12541882)
chr2 (19-93)||(28262568-28262642)
chr2 (18-92)||(29525857-29525931)
chr2 (69-103)||(39732764-39732798)
chr2 (183-244)||(8183985-8184046)
chr2 (18-91)||(18811376-18811448)
chr2 (67-120)||(36046222-36046275)
chr2 (67-103)||(1583250-1583286)
chr2 (187-235)||(5002650-5002698)
chr2 (27-91)||(9591968-9592032)
chr2 (32-104)||(14196808-14196879)
chr2 (187-235)||(33206956-33207004)
chr2 (19-99)||(39354299-39354379)
chr2 (71-118)||(8426899-8426946)
chr2 (77-120)||(31061543-31061586)
chr2 (18-117)||(41841703-41841802)
chr2 (149-235)||(5565779-5565864)
chr2 (18-92)||(6721746-6721820)
chr2 (67-117)||(22356177-22356227)
chr2 (37-103)||(27926603-27926669)
chr2 (185-235)||(30523446-30523495)
chr2 (67-100)||(15224732-15224765)
chr2 (75-112)||(17331441-17331478)
chr2 (67-120)||(17380014-17380067)
chr2 (67-120)||(31795787-31795840)
chr2 (67-112)||(36566876-36566921)
chr2 (195-232)||(38325279-38325316)
chr2 (187-235)||(567513-567561)
chr2 (18-54)||(12751899-12751935)
chr2 (18-101)||(32503193-32503279)
chr2 (67-103)||(39821842-39821878)
[»] chr7 (55 HSPs)
chr7 (18-120)||(39855989-39856091)
chr7 (139-232)||(23465816-23465909)
chr7 (18-109)||(41497081-41497172)
chr7 (18-120)||(43230254-43230356)
chr7 (18-120)||(33655232-33655334)
chr7 (18-119)||(34228442-34228544)
chr7 (18-103)||(17852906-17852991)
chr7 (28-120)||(13771080-13771172)
chr7 (18-93)||(34235131-34235207)
chr7 (18-120)||(1051622-1051724)
chr7 (18-103)||(40196656-40196740)
chr7 (18-141)||(25887190-25887312)
chr7 (18-141)||(47390853-47390975)
chr7 (18-87)||(24970289-24970358)
chr7 (18-103)||(37417757-37417842)
chr7 (148-232)||(36907455-36907539)
chr7 (70-120)||(4833549-4833599)
chr7 (23-120)||(41008200-41008298)
chr7 (191-244)||(14676390-14676443)
chr7 (18-120)||(31571592-31571696)
chr7 (148-235)||(36845265-36845353)
chr7 (160-244)||(45510502-45510586)
chr7 (148-235)||(41471612-41471699)
chr7 (14-93)||(48152029-48152104)
chr7 (67-120)||(1051518-1051571)
chr7 (18-103)||(42306369-42306454)
chr7 (67-120)||(42306503-42306556)
chr7 (67-120)||(47391029-47391082)
chr7 (70-118)||(18231762-18231810)
chr7 (168-231)||(7347731-7347794)
chr7 (69-120)||(25887368-25887419)
chr7 (137-232)||(38505158-38505253)
chr7 (18-56)||(22163233-22163271)
chr7 (18-56)||(22221941-22221979)
chr7 (66-120)||(36267571-36267625)
chr7 (40-97)||(23029480-23029537)
chr7 (67-112)||(40196558-40196603)
chr7 (67-120)||(41496975-41497028)
chr7 (67-120)||(48881576-48881629)
chr7 (39-103)||(10315648-10315712)
chr7 (61-117)||(24970187-24970242)
chr7 (18-110)||(26365796-26365888)
chr7 (18-119)||(18063685-18063784)
chr7 (18-117)||(33519069-33519168)
chr7 (67-98)||(33655148-33655179)
chr7 (69-120)||(37925859-37925910)
chr7 (18-81)||(40572358-40572421)
chr7 (67-117)||(13770969-13771019)
chr7 (69-103)||(17853045-17853079)
chr7 (22-104)||(19261967-19262048)
chr7 (70-120)||(33519224-33519274)
chr7 (67-120)||(35422137-35422190)
chr7 (71-120)||(37620951-37621000)
chr7 (67-120)||(43230408-43230461)
chr7 (133-201)||(7666974-7667042)
[»] chr8 (56 HSPs)
chr8 (18-141)||(31543196-31543318)
chr8 (18-112)||(7503078-7503172)
chr8 (18-120)||(11575530-11575632)
chr8 (18-99)||(42650460-42650541)
chr8 (18-100)||(16652987-16653069)
chr8 (18-139)||(1026973-1027092)
chr8 (18-120)||(1281161-1281263)
chr8 (67-120)||(31543090-31543143)
chr8 (18-97)||(41103630-41103709)
chr8 (28-118)||(2248472-2248562)
chr8 (18-108)||(7979170-7979260)
chr8 (18-118)||(29358463-29358565)
chr8 (18-120)||(30479841-30479943)
chr8 (67-233)||(43732860-43733024)
chr8 (18-99)||(37032418-37032499)
chr8 (183-235)||(4429592-4429644)
chr8 (18-81)||(6315119-6315182)
chr8 (18-104)||(38198173-38198258)
chr8 (18-103)||(11785561-11785646)
chr8 (18-126)||(37923202-37923311)
chr8 (139-219)||(11224445-11224525)
chr8 (67-119)||(16653122-16653174)
chr8 (18-117)||(3726979-3727078)
chr8 (28-95)||(11033460-11033527)
chr8 (69-120)||(36309018-36309069)
chr8 (186-244)||(5941224-5941282)
chr8 (18-120)||(9718603-9718705)
chr8 (18-120)||(10028128-10028230)
chr8 (18-120)||(12022267-12022369)
chr8 (18-120)||(28083760-28083862)
chr8 (18-92)||(30664407-30664481)
chr8 (18-108)||(40990308-40990398)
chr8 (138-234)||(35616730-35616825)
chr8 (187-235)||(37388448-37388496)
chr8 (37-120)||(13404994-13405077)
chr8 (21-108)||(33922550-33922637)
chr8 (18-120)||(31738441-31738543)
chr8 (67-120)||(1281316-1281369)
chr8 (67-112)||(30581986-30582031)
chr8 (67-103)||(1026884-1026920)
chr8 (69-120)||(8815316-8815367)
chr8 (189-232)||(11961383-11961426)
chr8 (70-117)||(30479738-30479785)
chr8 (189-232)||(40676781-40676824)
chr8 (18-56)||(4247641-4247679)
chr8 (69-111)||(12022170-12022212)
chr8 (67-117)||(16024327-16024376)
chr8 (139-201)||(34349918-34349980)
chr8 (18-56)||(34633819-34633857)
chr8 (67-108)||(2248625-2248666)
chr8 (67-120)||(3726881-3726934)
chr8 (67-120)||(10028296-10028349)
chr8 (67-120)||(31738596-31738649)
chr8 (67-143)||(26167752-26167828)
chr8 (69-141)||(30365128-30365199)
chr8 (195-235)||(31305648-31305688)
[»] chr3 (57 HSPs)
chr3 (18-120)||(25655096-25655198)
chr3 (160-244)||(32858989-32859073)
chr3 (18-139)||(24560217-24560337)
chr3 (22-112)||(30200219-30200309)
chr3 (138-235)||(36598412-36598508)
chr3 (18-117)||(28582633-28582732)
chr3 (18-112)||(41110445-41110539)
chr3 (18-119)||(21773801-21773902)
chr3 (18-100)||(651769-651851)
chr3 (18-103)||(2387884-2387969)
chr3 (18-118)||(14897996-14898096)
chr3 (148-235)||(33281548-33281635)
chr3 (18-93)||(46204931-46205006)
chr3 (18-120)||(220521-220623)
chr3 (166-244)||(1132778-1132856)
chr3 (18-81)||(10748421-10748484)
chr3 (18-120)||(18654724-18654827)
chr3 (18-120)||(27542055-27542157)
chr3 (18-103)||(37102272-37102358)
chr3 (18-108)||(41040074-41040164)
chr3 (18-103)||(46556178-46556263)
chr3 (61-122)||(52474082-52474143)
chr3 (18-103)||(9312595-9312683)
chr3 (67-120)||(26135970-26136023)
chr3 (67-120)||(34641163-34641216)
chr3 (18-87)||(52473966-52474035)
chr3 (69-117)||(25654991-25655039)
chr3 (156-244)||(54089287-54089375)
chr3 (148-235)||(53888655-53888742)
chr3 (70-120)||(24560393-24560443)
chr3 (67-117)||(41110342-41110392)
chr3 (18-104)||(49815456-49815541)
chr3 (18-63)||(16275829-16275874)
chr3 (22-99)||(37236962-37237038)
chr3 (18-87)||(54574485-54574554)
chr3 (183-235)||(23568232-23568284)
chr3 (137-201)||(30121336-30121400)
chr3 (67-103)||(30200123-30200159)
chr3 (67-103)||(37102184-37102220)
chr3 (28-120)||(40464005-40464097)
chr3 (18-93)||(52185060-52185136)
chr3 (67-118)||(46556318-46556368)
chr3 (69-103)||(21773957-21773991)
chr3 (18-104)||(25179928-25180014)
chr3 (70-108)||(28581216-28581254)
chr3 (28-62)||(31684362-31684396)
chr3 (18-56)||(36569027-36569065)
chr3 (183-232)||(13638599-13638648)
chr3 (190-235)||(15499166-15499211)
chr3 (67-120)||(24253895-24253948)
chr3 (67-120)||(46205065-46205118)
chr3 (67-120)||(55428552-55428605)
chr3 (72-120)||(36568922-36568969)
chr3 (195-235)||(36637968-36638008)
chr3 (67-103)||(40858738-40858774)
chr3 (139-235)||(49861005-49861101)
chr3 (148-224)||(54126440-54126516)
[»] chr1 (55 HSPs)
chr1 (18-119)||(2859056-2859157)
chr1 (18-142)||(30010329-30010452)
chr1 (18-126)||(38510018-38510126)
chr1 (18-117)||(10391893-10391992)
chr1 (18-141)||(35349586-35349708)
chr1 (18-118)||(32951442-32951542)
chr1 (148-232)||(52073255-52073339)
chr1 (150-235)||(15426150-15426234)
chr1 (18-108)||(51597698-51597788)
chr1 (18-103)||(26940967-26941052)
chr1 (28-120)||(12234028-12234120)
chr1 (18-103)||(8529834-8529919)
chr1 (148-233)||(41432587-41432672)
chr1 (18-103)||(50744405-50744490)
chr1 (18-96)||(40095057-40095136)
chr1 (18-103)||(44211029-44211114)
chr1 (148-244)||(33579413-33579509)
chr1 (18-120)||(41498422-41498524)
chr1 (67-120)||(12234183-12234236)
chr1 (67-120)||(40094951-40095004)
chr1 (32-92)||(43553068-43553129)
chr1 (18-119)||(49832566-49832667)
chr1 (183-233)||(17416578-17416628)
chr1 (67-120)||(35349484-35349535)
chr1 (67-120)||(30010505-30010558)
chr1 (67-120)||(38509912-38509965)
chr1 (138-235)||(49102790-49102887)
chr1 (148-244)||(30543193-30543284)
chr1 (183-235)||(34749875-34749927)
chr1 (50-102)||(41676437-41676489)
chr1 (29-93)||(45585820-45585884)
chr1 (148-235)||(9312801-9312887)
chr1 (136-231)||(39508941-39509036)
chr1 (137-232)||(50587205-50587299)
chr1 (70-120)||(2858950-2859000)
chr1 (67-120)||(20576151-20576204)
chr1 (148-223)||(9314873-9314951)
chr1 (20-104)||(27739086-27739169)
chr1 (67-103)||(41498577-41498613)
chr1 (18-110)||(49946712-49946804)
chr1 (28-103)||(2470869-2470944)
chr1 (67-118)||(8529972-8530023)
chr1 (149-232)||(17556964-17557047)
chr1 (189-231)||(718440-718482)
chr1 (157-235)||(34285709-34285786)
chr1 (69-119)||(40709311-40709361)
chr1 (137-235)||(50476697-50476795)
chr1 (18-107)||(6563609-6563697)
chr1 (67-112)||(7444504-7444549)
chr1 (67-120)||(25268437-25268490)
chr1 (71-120)||(35512974-35513023)
chr1 (67-99)||(40964772-40964804)
chr1 (18-54)||(41676363-41676399)
chr1 (18-102)||(42230575-42230658)
chr1 (138-230)||(43036138-43036230)
[»] chr5 (57 HSPs)
chr5 (18-120)||(13634729-13634831)
chr5 (18-120)||(26414911-26415013)
chr5 (148-244)||(9684616-9684712)
chr5 (18-141)||(16938477-16938599)
chr5 (18-120)||(2550476-2550578)
chr5 (18-120)||(7544154-7544256)
chr5 (18-120)||(10476044-10476148)
chr5 (32-99)||(20147014-20147080)
chr5 (21-103)||(10650464-10650546)
chr5 (18-111)||(28279600-28279694)
chr5 (18-103)||(9856915-9857000)
chr5 (18-119)||(10072771-10072872)
chr5 (148-244)||(19389658-19389749)
chr5 (50-120)||(1657969-1658039)
chr5 (133-235)||(6816392-6816494)
chr5 (18-108)||(9798736-9798826)
chr5 (18-120)||(42681466-42681573)
chr5 (18-120)||(36363050-36363152)
chr5 (36-93)||(11419303-11419360)
chr5 (67-120)||(11757076-11757129)
chr5 (28-120)||(22022865-22022960)
chr5 (18-98)||(4373690-4373770)
chr5 (18-81)||(11756934-11756997)
chr5 (69-120)||(13634886-13634937)
chr5 (67-142)||(14245219-14245293)
chr5 (18-76)||(8502959-8503017)
chr5 (67-120)||(14245106-14245159)
chr5 (183-232)||(33682544-33682593)
chr5 (59-120)||(36363197-36363258)
chr5 (67-119)||(8502854-8502906)
chr5 (28-120)||(14681488-14681579)
chr5 (157-244)||(17667968-17668055)
chr5 (18-117)||(40815318-40815416)
chr5 (70-120)||(16938655-16938705)
chr5 (70-103)||(2550387-2550420)
chr5 (67-120)||(7544309-7544362)
chr5 (18-59)||(20513573-20513614)
chr5 (66-103)||(22023541-22023578)
chr5 (71-120)||(34980987-34981036)
chr5 (183-235)||(2561270-2561322)
chr5 (71-103)||(29002241-29002273)
chr5 (69-120)||(10476203-10476254)
chr5 (18-93)||(37606940-37607014)
chr5 (190-244)||(7398648-7398702)
chr5 (69-119)||(34980829-34980879)
chr5 (18-120)||(36392274-36392375)
chr5 (18-92)||(39966076-39966150)
chr5 (34-118)||(43396-43481)
chr5 (67-120)||(11436957-11437010)
chr5 (18-91)||(13298313-13298386)
chr5 (18-63)||(17024348-17024393)
chr5 (70-110)||(26415069-26415109)
chr5 (71-103)||(33744228-33744260)
chr5 (191-235)||(35042373-35042417)
chr5 (183-235)||(35704781-35704833)
chr5 (18-93)||(37779150-37779223)
chr5 (148-232)||(43496721-43496805)
[»] chr4 (63 HSPs)
chr4 (18-120)||(27735763-27735865)
chr4 (20-120)||(54935085-54935186)
chr4 (18-118)||(31348445-31348545)
chr4 (18-141)||(26166935-26167057)
chr4 (18-120)||(46007825-46007927)
chr4 (18-109)||(37711172-37711263)
chr4 (18-141)||(45741888-45742010)
chr4 (18-120)||(1968483-1968585)
chr4 (18-119)||(47433832-47433934)
chr4 (150-232)||(9021106-9021188)
chr4 (148-244)||(15451162-15451258)
chr4 (18-86)||(35248738-35248806)
chr4 (29-120)||(49735603-49735693)
chr4 (18-120)||(6891378-6891480)
chr4 (66-119)||(6938419-6938472)
chr4 (18-120)||(5730954-5731057)
chr4 (18-120)||(54320453-54320554)
chr4 (183-244)||(24662607-24662668)
chr4 (186-235)||(42759515-42759564)
chr4 (67-120)||(49735486-49735539)
chr4 (67-120)||(54935242-54935295)
chr4 (67-118)||(31348341-31348392)
chr4 (148-235)||(34236363-34236449)
chr4 (18-77)||(36151637-36151696)
chr4 (148-229)||(15498622-15498703)
chr4 (67-120)||(37711296-37711349)
chr4 (148-232)||(37969568-37969651)
chr4 (183-238)||(56118048-56118103)
chr4 (18-120)||(2247927-2248027)
chr4 (66-100)||(24565384-24565418)
chr4 (18-92)||(28332850-28332924)
chr4 (183-229)||(38994059-38994105)
chr4 (18-92)||(44784038-44784112)
chr4 (67-141)||(54320607-54320680)
chr4 (67-120)||(21694908-21694961)
chr4 (187-232)||(24682861-24682906)
chr4 (67-120)||(45742063-45742116)
chr4 (70-103)||(46007734-46007767)
chr4 (148-232)||(52554823-52554907)
chr4 (187-231)||(54723699-54723743)
chr4 (71-126)||(1968363-1968418)
chr4 (18-81)||(2917087-2917150)
chr4 (41-120)||(24565491-24565570)
chr4 (201-232)||(27485140-27485171)
chr4 (18-120)||(47846179-47846282)
chr4 (18-120)||(16400818-16400920)
chr4 (148-205)||(26571321-26571379)
chr4 (50-120)||(27735901-27735971)
chr4 (148-210)||(32189858-32189920)
chr4 (69-103)||(34110979-34111013)
chr4 (138-235)||(17622288-17622385)
chr4 (71-120)||(17938125-17938174)
chr4 (69-126)||(29993946-29994003)
chr4 (71-120)||(35248863-35248912)
chr4 (75-120)||(41174526-41174571)
chr4 (183-244)||(41495500-41495561)
chr4 (194-235)||(52430417-52430458)
chr4 (67-120)||(54576345-54576398)
chr4 (69-142)||(54576504-54576576)
chr4 (18-119)||(29798307-29798404)
chr4 (138-222)||(35959349-35959433)
chr4 (18-86)||(41174397-41174465)
chr4 (139-235)||(42650801-42650897)
[»] chr6 (38 HSPs)
chr6 (18-120)||(31849128-31849230)
chr6 (18-120)||(16738120-16738221)
chr6 (21-118)||(19278165-19278261)
chr6 (148-232)||(24379774-24379858)
chr6 (18-120)||(4097636-4097739)
chr6 (148-232)||(33938949-33939033)
chr6 (18-120)||(14515491-14515591)
chr6 (17-120)||(33041488-33041591)
chr6 (18-98)||(2893670-2893750)
chr6 (22-142)||(12811108-12811227)
chr6 (148-244)||(16329539-16329634)
chr6 (18-93)||(33235996-33236071)
chr6 (148-227)||(34556998-34557077)
chr6 (18-103)||(1300654-1300740)
chr6 (23-97)||(6034201-6034275)
chr6 (18-80)||(13583777-13583839)
chr6 (18-103)||(2892727-2892812)
chr6 (67-107)||(1300793-1300833)
chr6 (67-119)||(9721157-9721209)
chr6 (67-118)||(10818389-10818440)
chr6 (28-78)||(5585436-5585486)
chr6 (18-76)||(34176397-34176455)
chr6 (67-120)||(9719049-9719102)
chr6 (67-103)||(21606879-21606915)
chr6 (70-120)||(1390495-1390545)
chr6 (71-120)||(30487324-30487373)
chr6 (67-103)||(9298659-9298695)
chr6 (67-103)||(31849283-31849319)
chr6 (14-92)||(1390365-1390444)
chr6 (170-229)||(13380662-13380721)
chr6 (66-120)||(23091130-23091185)
chr6 (67-118)||(33236123-33236174)
chr6 (70-120)||(19278052-19278102)
chr6 (71-120)||(665858-665907)
chr6 (67-120)||(10818247-10818300)
chr6 (183-235)||(2523559-2523611)
chr6 (188-232)||(16361714-16361758)
chr6 (138-235)||(24735049-24735148)
[»] scaffold0067 (2 HSPs)
scaffold0067 (28-120)||(39324-39416)
scaffold0067 (67-120)||(39204-39258)
[»] scaffold0096 (1 HSPs)
scaffold0096 (18-117)||(6605-6704)
[»] scaffold0262 (2 HSPs)
scaffold0262 (18-101)||(16420-16503)
scaffold0262 (71-120)||(16314-16363)
[»] scaffold0519 (1 HSPs)
scaffold0519 (139-219)||(5314-5394)
[»] scaffold0294 (1 HSPs)
scaffold0294 (18-81)||(15320-15383)
[»] scaffold0171 (1 HSPs)
scaffold0171 (20-93)||(15995-16068)
[»] scaffold0026 (2 HSPs)
scaffold0026 (43-120)||(1190-1267)
scaffold0026 (71-105)||(1349-1383)
[»] scaffold0007 (1 HSPs)
scaffold0007 (67-111)||(242389-242433)
[»] scaffold0198 (1 HSPs)
scaffold0198 (70-118)||(3167-3215)
[»] scaffold0341 (1 HSPs)
scaffold0341 (18-107)||(18802-18890)
[»] scaffold1763 (1 HSPs)
scaffold1763 (203-235)||(484-516)


Alignment Details
Target: chr2 (Bit Score: 102; Significance: 9e-51; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 39821789 - 39821668
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39821789 ataatacttaaatcgcacttaatttattttagaaaaacatgttatagaatccataatttaaaaatgaaaagtaaaccctcccctccatttccctcttaaa 39821690  T
Q  118 cccataatcaaaaacacaccct 139  Q
    ||| ||||||||||||||||||    
T  39821689 cccttaatcaaaaacacaccct 39821668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 39820095 - 39820000
Alignment:
Q  149 tttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39820095 tttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttctgaacgactaatt 39820000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 36347665 - 36347787
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||||| ||||||||||| ||||| ||| |||||||| ||||    
T  36347665 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaactctcccttcccttcccctcctaaa 36347764  T
Q  118 cccataatcaaaaacacaccctaa 141  Q
    |||  ||||  |||||||||||||    
T  36347765 ccctcaatc-caaacacaccctaa 36347787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 15224818 - 15224920
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||| |  |||||||||||||| |||||||||||| |||||||| |||||||| ||||    
T  15224818 ataatacttcaatcacacttaatttattctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagtaaaccatcccctcccttcccctcctaaa 15224917  T
Q  118 ccc 120  Q
    |||    
T  15224918 ccc 15224920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 244
Target Start/End: Complemental strand, 39913540 - 39913433
Alignment:
Q  137 cctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaac 236  Q
    ||||||| || ||||| ||||||||||| |||||||||| ||||  || ||||||||||||||||| ||||||||||||||||||||| ||| ||| ||     
T  39913540 cctaaggctttgtttgagagtttggaggggaggggaagaaaaggttttcgagggttggaaatatagtggaaaatggtaaaatctttcaaattattttaaa 39913441  T
Q  237 gactaatt 244  Q
    ||||||||    
T  39913440 gactaatt 39913433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 8426995 - 8427097
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||   || ||| |||||||||||||||||||| ||||||||| || ||||| ||||    
T  8426995 ataatacttcaatcgcacttaatttattttagaaaaacatgttatatcgtctgtactttaaaaatgaaaagtaaactctcccctccctttccctcctaaa 8427094  T
Q  118 ccc 120  Q
    |||    
T  8427095 ccc 8427097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 19566945 - 19567030
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||||||   ||| |||||||||||||||    
T  19566945 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaatgaaattaaaccctcccctcc 19567030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 135 - 244
Target Start/End: Complemental strand, 39925258 - 39925149
Alignment:
Q  135 accctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttga 234  Q
    ||||||||| || ||||| | |||| |||||||||||||| |||  | ||| |||||||||||||||||||  |||||||||||||||||||||||||||    
T  39925258 accctaaggctttgtttgagggttttgaggagaggggaagggaaaactttgaagggttggaaatatagggggtaatggtaaaatctttcacattttttga 39925159  T
Q  235 acgactaatt 244  Q
      ||||||||    
T  39925158 gagactaatt 39925149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 35736295 - 35736173
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| | |||||||| |||||||||||||||||| |||||  | ||||| ||||||||| ||||| ||| ||||||||||| |||||||| ||||    
T  35736295 ataatacttcagtcacacttcatttattttagaaaaacatgttatctagtccgtgatttaaaaaagaaaattaacccctcccctcccttcccctcctaaa 35736196  T
Q  118 cccataatcaaaaacacaccctaa 141  Q
    |||  ||||  |||||||||||||    
T  35736195 ccctcaatc-caaacacaccctaa 35736173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 23748215 - 23748130
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| |||||||||| ||||||||| |||||||| |||||| | |||||| |||||||| ||||| |||||||||||||||    
T  23748215 ataatacttcaatcacacttgatttatttttgaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaaccctcccctcc 23748130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 39732853 - 39732953
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||| ||||||||||||||||||||||| | |||| | ||||||||||||||| |||||||||| | |||| | | ||||||||| |||    
T  39732853 ataatacttcaatcatacttaatttattttagaaaaacatg-tatatagtccgtaatttaaaaacgaaaagtaaatcatccctttccttcccctctcaaa 39732951  T
Q  118 cc 119  Q
    ||    
T  39732952 cc 39732953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 15803437 - 15803341
Alignment:
Q  139 taaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||| || ||||||||||||||||| |||||||||  ||||| |||| |||   ||||||||||||||||| |  |||||||||||||||||||||    
T  15803437 taaggctttgtttgggagtttggaggggaggggaaggaaaggctttggggggagagaaatataggggaaaattgagaaatctttcacattttttgaa 15803341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 36566975 - 36567078
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatg-aaaagtaaaccctcccctccattcccctcttaa 116  Q
    ||||||||| ||||||| |||||||||| |||||||||| |||||| ||| | ||||||||||| | ||||||||| | || |||| ||||||||| |||    
T  36566975 ataatacttcaatcacaattaatttattatagaaaaacatgttatataattcataatttaaaaacgaaaaagtaaatcatctcctctattcccctcctaa 36567074  T
Q  117 accc 120  Q
    ||||    
T  36567075 accc 36567078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 2241530 - 2241436
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    ||||||||| ||| ||||||||||||||||||||||||   ||||| | ||||||||||| ||   |||||||||| ||||||||| ||||||||    
T  2241530 ataatacttcaattacacttaatttattttagaaaaacgtattatatagtccgtaatttataataaaaaagtaaactctcccctcccttcccctc 2241436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 14385301 - 14385249
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  14385301 ttggagggttgaaaatatagaggaaaatagtaaaatctttcacattttttgaa 14385249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 37740015 - 37740085
Alignment:
Q  18 ataatacttaaatcacacttaatttattttag-aaaaacacgttatagaatccgtaatttaaaaatgaaaa 87  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||| |||| | |||||||||| |||||    
T  37740015 ataatacttcaatcacacttaatttattttagaaaaaacatgttatataatctggaatttaaaaaagaaaa 37740085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 40022549 - 40022599
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||    
T  40022549 gtaatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccc 40022599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 41778893 - 41778791
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||| |||||||  |||||   ||| |||||||||    |||||||||||||||||||| || ||||  ||||    
T  41778893 ataatacttcaatcacacttaatttattttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccctttcccttctaaa 41778794  T
Q  118 ccc 120  Q
    |||    
T  41778793 ccc 41778791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 119
Target Start/End: Original strand, 887266 - 887335
Alignment:
Q  50 aaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacc 119  Q
    |||||||  |||||| |||||||||||||||| ||||||||| | ||||||||| |||||||| ||||||    
T  887266 aaaaacattttatagcatccgtaatttaaaaaagaaaagtaagcgctcccctcccttcccctcctaaacc 887335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 7681368 - 7681299
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaa 87  Q
    ||||||||| ||||||||||||||||||||| |||||    ||||| ||||||||||| |||||||||||    
T  7681368 ataatacttcaatcacacttaatttattttacaaaaaactattatataatccgtaattaaaaaatgaaaa 7681299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 16565897 - 16565852
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttata 63  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  16565897 ataatacttcaatcacacttaatttattttagaaaaacatgttata 16565852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 23748268 - 23748321
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||| |||||||    
T  23748268 tccgtagtttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccc 23748321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 31795893 - 31795974
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctccc 99  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||  | ||||| ||||| ||| ||||| ||| |||||||    
T  31795893 ataatacttcaatcacacttaatttattttaaaaaaacatgttatttactccgtgatttagaaaagaaaattaatccctccc 31795974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 9427105 - 9427005
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||| | ||||||| ||| |||||||| |||||| | |  |||||||||||| |||||  |||||||| ||||| |||||||| ||||    
T  9427105 ataatacttcaatcacgcataatttagttttgaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaaccctctcctcccttcccctcctaaa 9427006  T
Q  118 c 118  Q
    |    
T  9427005 c 9427005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 36046341 - 36046427
Alignment:
Q  33 cacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||| ||||||||||| |||| || ||||||   |||||||||||||||  ||||||||| |||||||||| |||||||| |||||||    
T  36046341 cactcaatttattttataaaagcatgttatatcgtccgtaatttaaaaaacaaaagtaaa-cctcccctcccttcccctcataaaccc 36046427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 40022490 - 40022427
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaa 81  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||| | | | |||||||||||    
T  40022490 ataatacttcaatcacacttaatttattttacaaaaacatgttatatagttcataatttaaaaa 40022427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 5321998 - 5322036
Alignment:
Q  193 ggaaatataggggaaaatggtaaaatctttcacattttt 231  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  5321998 ggaaatataggggaaaatggtgaaatctttcacattttt 5322036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 12541882 - 12541800
Alignment:
Q  22 tacttaaatcacacttaatttattttagaaaaac-acgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||| |||| ||||||||||||||||||||||  |  ||||| | ||||||||||||||| |||||||| || |||||||||    
T  12541882 tacttcaatcgcacttaatttattttagaaaaaatattttatatagtccgtaatttaaaaaagaaaagtagactctcccctcc 12541800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 28262568 - 28262642
Alignment:
Q  19 taatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||| || |||||||  |||||||||||||||||||| |||||| | ||  ||||||||||| |||||||||||    
T  28262568 taatatttcaatcacatgtaatttattttagaaaaacatgttatatagtcaataatttaaaaaagaaaagtaaac 28262642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 29525857 - 29525931
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaa 92  Q
    ||||||||| ||||||| ||||||||||||| |||||||  ||||| | ||||| ||||||||| ||||| ||||    
T  29525857 ataatacttcaatcacatttaatttattttaaaaaaacatattatatattccgtgatttaaaaaagaaaaataaa 29525931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 103
Target Start/End: Complemental strand, 39732798 - 39732764
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||||||||||||||||||||||||||    
T  39732798 cgtaatttaaaaatgaaaagtaaaccctcccctcc 39732764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 8183985 - 8184046
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    |||||| ||||||||||||||| |||||| |||| |||||| ||||||||||| || |||||    
T  8183985 ttggagagttggaaatatagggaaaaatgataaattctttcgcattttttgaaagagtaatt 8184046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 18811448 - 18811376
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaa 91  Q
    |||||| || ||||||||||||||||||||| |||||||| ||||||   | |||||||||||| |||||||||    
T  18811448 ataatatttcaatcacacttaatttatttta-aaaaacactttatagttactgtaatttaaaaaagaaaagtaa 18811376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 36046275 - 36046222
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||| ||||| ||||||||  |||||||| |||||||    
T  36046275 tccgtaatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccc 36046222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 1583250 - 1583286
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||||||||||||||| |||||||||||||    
T  1583250 tccgtaatttaaaaatgaaaagtgaaccctcccctcc 1583286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 5002650 - 5002698
Alignment:
Q  187 agggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||||  ||||||||||||||| ||||||||||| ||||||||||||    
T  5002650 agggttgagaatataggggaaaatagtaaaatcttttacattttttgaa 5002698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 9591968 - 9592032
Alignment:
Q  27 aaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaa 91  Q
    |||| ||||||||| ||||||||||||||| |||||| | | |||||||||||||  ||||||||    
T  9591968 aaattacacttaatatattttagaaaaacatgttatatagtgcgtaatttaaaaaaaaaaagtaa 9592032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 14196808 - 14196879
Alignment:
Q  32 acacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcca 104  Q
    ||||||| ||||||||| |||||||  ||||||  | ||||||||||||| ||||||||| ||||||||||||    
T  14196808 acacttagtttatttta-aaaaacattttatagtgttcgtaatttaaaaaagaaaagtaagccctcccctcca 14196879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 33207004 - 33206956
Alignment:
Q  187 agggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||||| ||||| | |||||||||| |||||||||||||||||||||    
T  33207004 agggttggtaatatggaggaaaatggtcaaatctttcacattttttgaa 33206956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 39354299 - 39354379
Alignment:
Q  19 taatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctccc 99  Q
    |||||||| ||||||||| | ||||||||||| ||||| |||||| ||   ||||||||||||  |||||||||| |||||    
T  39354299 taatacttcaatcacactaactttattttagataaacatgttatataacttgtaatttaaaaaaaaaaagtaaactctccc 39354379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 118
Target Start/End: Complemental strand, 8426946 - 8426899
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    |||||||||||| |||||||||||||||| ||| |||||||| |||||    
T  8426946 taatttaaaaattaaaagtaaaccctcccttcccttcccctcctaaac 8426899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 31061543 - 31061586
Alignment:
Q  77 aaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||    
T  31061543 aaaaaagaaaagtaaatcctcccctccattcccctcctaaaccc 31061586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 41841802 - 41841703
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||  |||||| ||||||||||||||| |||| | |||||| | |  |||||||||||| |||||  |||||||||| ||| || ||||| ||||    
T  41841802 ataatactccaatcacccttaatttattttaggaaaatatgttatatagttggtaatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaa 41841703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 5565864 - 5565779
Alignment:
Q  149 tttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||| |||||||||| |||| | ||| |||||| ||| || ||| |||||||||   ||||| ||||||||||||||||||||||||    
T  5565864 tttgagagtttggagtagagagaaagggaaggctttgaagagtttgaaatatagaa-aaaatagtaaaatctttcacattttttgaa 5565779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 6721746 - 6721820
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||| || |||||||||| |||||||||||||||||| | |||| | |||||  |||||||| ||||| ||||    
T  6721746 ataatatttcaatcacacttgatttattttagaaaaacatgctatatattccgtggtttaaaaaagaaaactaaa 6721820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 22356177 - 22356227
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||||||||| ||||| | ||||||||||||| |||||||| ||||    
T  22356177 tccgtaatttaaaaaagaaaaatgaaccctcccctcccttcccctcctaaa 22356227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 103
Target Start/End: Complemental strand, 27926669 - 27926603
Alignment:
Q  37 taatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||||||||||| |||||| |||||   ||||||||| ||||| ||||| ||| |||||    
T  27926669 taatttattttagaaaaacatgttatacaatccagtatttaaaaaagaaaaataaacgctcacctcc 27926603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 30523495 - 30523446
Alignment:
Q  185 ggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||| ||||| || ||||| ||||||||||||||||||||||||||    
T  30523495 ggagggttgaaaatacagtggaaa-tggtaaaatctttcacattttttgaa 30523446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 15224765 - 15224732
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccc 100  Q
    ||||||||||||||||||||||||||| ||||||    
T  15224765 tccgtaatttaaaaatgaaaagtaaacactcccc 15224732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 112
Target Start/End: Complemental strand, 17331478 - 17331441
Alignment:
Q  75 ttaaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  17331478 ttaaaaaagaaaagtaaaccctcccctcctttcccctc 17331441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 17380014 - 17380067
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||||  ||||| |||||||  |||||||| |||||||    
T  17380014 tccgtaatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccc 17380067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 31795840 - 31795787
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| |||||||||  |||||||||| ||| |||| |||||||    
T  31795840 tccgtaatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccc 31795787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 36566921 - 36566876
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    |||||||||||||||||||||||||| |||| | ||| ||||||||    
T  36566921 tccgtaatttaaaaatgaaaagtaaatcctctcatcccttcccctc 36566876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Complemental strand, 38325316 - 38325279
Alignment:
Q  195 aaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  38325316 aaatatagaggaaaatggaaaaatctttcacatttttt 38325279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 567561 - 567513
Alignment:
Q  187 agggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||| ||||||||||  |||||| ||||||||||||||| |||||||||    
T  567561 agggatggaaatataacggaaaaaggtaaaatctttcaccttttttgaa 567513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 12751935 - 12751899
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaa 54  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  12751935 ataatacttcaatcacacttaaattattttagaaaaa 12751899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 32503279 - 32503193
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatt---taaaaatgaaaagtaaaccctcccct 101  Q
    |||||| || ||||| ||||||||||||||||||||| | |||||| |||| ||| ||    ||||| ||||||||||| |||||||    
T  32503279 ataatattttaatcatacttaatttattttagaaaaatatgttatataatcagtatttaaaaaaaaaagaaaagtaaacactcccct 32503193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 39821842 - 39821878
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  39821842 tccgtaatttaaaaaagaaaactaaaccctcccctcc 39821878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 39855989 - 39856091
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||| | ||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  39855989 ataatacttaagtcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 39856088  T
Q  118 ccc 120  Q
    |||    
T  39856089 ccc 39856091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 23465816 - 23465909
Alignment:
Q  139 taaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||| || ||||||||||||||||| ||||||||| |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23465816 taaggctttgtttgggagtttggaggggaggggaagggaagactttgaagggttggaaatataggggaaaatggtaaaatctttcacatttttt 23465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 41497081 - 41497172
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattccc 109  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||||| ||||||||||||||||||||| |||||    
T  41497081 ataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccctcccctcccttccc 41497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 43230356 - 43230254
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||| ||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| | || | ||||||||    
T  43230356 ataattcttcaatcgcacttaatttattttagaaaaacatgttatataatccgtaatttaaaaaagaaaagtaaaccctccccttcctttctctcttaaa 43230257  T
Q  118 ccc 120  Q
    |||    
T  43230256 ccc 43230254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 33655232 - 33655334
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| |  || ||||||||||| ||||||||||||||| ||||  |||||||| ||||    
T  33655232 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagcccataatttaaaaaagaaaagtaaaccctcgcctctcttcccctcctaaa 33655331  T
Q  118 ccc 120  Q
    |||    
T  33655332 ccc 33655334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 34228442 - 34228544
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttataga-atccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaa 116  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| |  |||||||||| ||||||||||||||| |||||||||| ||| |||| |||    
T  34228442 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagttccgtaattttaaaatgaaaagtaaatcctcccctcccttctcctcctaa 34228541  T
Q  117 acc 119  Q
    |||    
T  34228542 acc 34228544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 17852991 - 17852906
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||| |||||||||||    
T  17852991 ataatacctcaatcacacttaatttattttagaaaaacatgttatttaatccgtaatttaaaaaagaaaagtaatccctcccctcc 17852906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 13771080 - 13771172
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||| ||||||| |||||| | ||||||||||||||| ||||||||||| ||| ||||| |||||||| |||||||    
T  13771080 aatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaacgaaaagtaaactctcacctcccttcccctcctaaaccc 13771172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 34235131 - 34235207
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaa-cacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||| ||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  34235131 ataatacttcaatcacacttaatttattttagaaaaaacatgttatataatccgtaatttaaaaatgaaaagtaaac 34235207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 1051622 - 1051724
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||| | | ||||||||||||| ||||| |||| |||| ||||| |||||||| ||||    
T  1051622 ataatgcttcaatcacacttaatttattttagaaaaacaggttatatagttcgtaatttaaaaaagaaaaataaatcctctcctcccttcccctcctaaa 1051721  T
Q  118 ccc 120  Q
    |||    
T  1051722 ccc 1051724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 40196656 - 40196740
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||| ||||||||||    
T  40196656 ataatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacaaaaagtaaa-cctcccctcc 40196740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 25887312 - 25887190
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||  ||||||||||||||||||||||||||||| |||||| | ||||| ||||| ||| |||||  ||| |||||||||| |||||||| ||||    
T  25887312 ataatactccaatcacacttaatttattttagaaaaacatgttatatagtccgtgatttataaaagaaaaacaaatcctcccctcccttcccctcataaa 25887213  T
Q  118 cccataatcaaaaacacaccctaa 141  Q
    |||  ||||  |||||||||||||    
T  25887212 ccctcaatc-caaacacaccctaa 25887190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 47390975 - 47390853
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||| ||||| ||||||||||||||| |||||| | | | ||||||||||| |||||||||||||||| |||| |||||||| |||     
T  47390975 ataatacttcaatcacaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaaccctccactcccttcccctcctaac 47390876  T
Q  118 cccataatcaaaaacacaccctaa 141  Q
    |||  ||||  |||||||||||||    
T  47390875 ccctcaatc-caaacacaccctaa 47390853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 24970289 - 24970358
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaa 87  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| |||||    
T  24970289 ataatacttcaatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaaagaaaa 24970358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 37417757 - 37417842
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| |||||||||||| ||| ||| |||||||| |||||| | ||||| |||||||||||||||||||||| ||||||||    
T  37417757 ataatacttcaatcacacttaacttaattttgaaaaacatgttatatagtccgttatttaaaaatgaaaagtaaaccatcccctcc 37417842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 36907539 - 36907455
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    |||||||| |||||||| ||||||||   ||| | ||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  36907539 gtttgggaatttggaggggaggggaatgaaagactttggagggttgaaaatataggagaaaaaggtaaaatctttcacatttttt 36907455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 4833599 - 4833549
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  4833599 gtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccc 4833549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 41008298 - 41008200
Alignment:
Q  23 acttaaatcacacttaatttattttagaaaaa-cacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||| ||||||||||||||||||||| ||||| || |||||| | ||||||||||||||| |||||  |||  ||||||||| ||||||||| ||||||    
T  41008298 acttcaatcacacttaatttattttaaaaaaaacatgttatatagtccgtaatttaaaaaagaaaaacaaattctcccctcccttcccctctcaaaccc 41008200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 14676443 - 14676390
Alignment:
Q  191 ttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| || |||||    
T  14676443 ttggaaatataggggaaaatggtcaaatctttcacattttttgaaagagtaatt 14676390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 31571592 - 31571696
Alignment:
Q  18 ataatacttaaatcacacttaat-ttattttagaaaaa-cacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctctta 115  Q
    ||||||||| ||||||||||||| || ||||| ||||| || ||||||   ||||||||||||||| ||||||||||| ||||||||  |||||||| ||    
T  31571592 ataatacttcaatcacacttaatatttttttaaaaaaagcatgttatatggtccgtaatttaaaaaagaaaagtaaactctcccctcgcttcccctccta 31571691  T
Q  116 aaccc 120  Q
    |||||    
T  31571692 aaccc 31571696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 36845265 - 36845353
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggt-aaaatctttcacattttttgaa 235  Q
    |||||| |||||||||| |||||||| | ||| | |||||| ||| |||||| ||||||||||||| ||||| ||||||||||||||||    
T  36845265 gtttggaagtttggaggggaggggaaaaaaagactttggagagtttgaaataaaggggaaaatggtaaaaatatttcacattttttgaa 36845353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 45510586 - 45510502
Alignment:
Q  160 ggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||| ||||||||| |||||| |||||||||||||||||||| |||| || ||||||  ||||||||||| |||| || |||||    
T  45510586 ggaggggaggggaagggaaggctttggagggttggaaatatagtggaagatcgtaaaaattttcacattttgtgaaagagtaatt 45510502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 41471699 - 41471612
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||||||||||||||  |||||||  || ||| |||| |||| ||||||||||||| ||||||  | |||||||||||||||||||    
T  41471699 gtttgggagtttggagggaaggggaattgagggctttggggggtgggaaatatagggggaaatggagagatctttcacattttttgaa 41471612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 48152104 - 48152029
Alignment:
Q  14 atcaataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||| |||||||| ||||||||| ||||||||||||||||||| ||||||    |||||||||||||| |||| ||||||    
T  48152104 atcattaatacttcaatcacactaaatttattttagaaaaacatgttata----ccgtaatttaaaaaagaaaggtaaac 48152029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 1051571 - 1051518
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||| || |||||||||||| ||||||||| |||||||    
T  1051571 tccgtaatttaaaaatgaaatgttaaccctcccctctattcccctcctaaaccc 1051518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 42306454 - 42306369
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||  |||||| |||||||||||||||||| ||| |||||| | || |||||||||||| |||||  ||||||| ||||||    
T  42306454 ataatactccaatcacgcttaatttattttagaaatacatgttatatagtcggtaatttaaaaaagaaaatcaaacccttccctcc 42306369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 42306503 - 42306556
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||| |||||| ||||||| ||||||||| |||||||    
T  42306503 tccgtaatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccc 42306556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 47391029 - 47391082
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||||  |||| ||||||||| ||||||||||||||||    
T  47391029 tccgtaatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccc 47391082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 18231762 - 18231810
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  18231762 gtaatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaac 18231810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 7347731 - 7347794
Alignment:
Q  168 ggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttt 231  Q
    ||||||||||| |  || ||||||||||||||||||  ||||||||||||||||| ||||||||    
T  7347731 ggggaagagaatgttttagagggttggaaatataggaaaaaatggtaaaatcttttacattttt 7347794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 25887368 - 25887419
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||| |||||| ||||||||| |||||||| |||||||    
T  25887368 cgtaatttaaaaatgaaatgtaaactctcccctcccttcccctcctaaaccc 25887419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 38505158 - 38505253
Alignment:
Q  137 cctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||||| || ||||||||||||||||| ||||||||| |||||| |||  |||| | |||| |  ||||||||||  |||||||||| |||||||    
T  38505158 cctaaggctttgtttgggagtttggaggggaggggaagggaaggctttgaggggtggaaaatttgagggaaaatggagaaatctttcaaatttttt 38505253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 22163233 - 22163271
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaaca 56  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  22163233 ataatacttcaatcacacttaatttattttagaaaaaca 22163271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 22221941 - 22221979
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaaca 56  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  22221941 ataatacttcaatcacacttaatttattttagaaaaaca 22221979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 120
Target Start/End: Complemental strand, 36267625 - 36267571
Alignment:
Q  66 atccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||| ||||| ||| ||||||||||| |||||||| |||||||    
T  36267625 atccgtaatttaaaaaagaaaactaagccctcccctcccttcccctcctaaaccc 36267571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 23029480 - 23029537
Alignment:
Q  40 tttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctc 97  Q
    ||||||||||||||||| |||||| | ||  ||||||||||| |||||||||||||||    
T  23029480 tttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctc 23029537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 40196603 - 40196558
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||    
T  40196603 tccgtaattcaaaaatgaaaagtaaaccctcctctcccttcccctc 40196558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 41497028 - 41496975
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||| ||||||||| | |||||||| |||||||| |||||||    
T  41497028 tccgtaatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccc 41496975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 48881629 - 48881576
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| ||||||||| || |||||||| |||||||| |||||||    
T  48881629 tccgtaatttaaaaaagaaaagtaagccatcccctcccttcccctcctaaaccc 48881576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 103
Target Start/End: Complemental strand, 10315712 - 10315648
Alignment:
Q  39 atttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||||||| | |||||| | || | |||||||||| |||||||||| ||||||||||    
T  10315712 atttattttagaaaaatatgttatatagtctgaaatttaaaaaagaaaagtaaatcctcccctcc 10315648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 24970242 - 24970187
Alignment:
Q  61 atagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||| ||||||||||||||||||||||||||| | |||||||| |||||||| ||||    
T  24970242 atagtatccgtaatttaaaaatgaaaagtaaatcatcccctcc-ttcccctcctaaa 24970187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 26365888 - 26365796
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccc 110  Q
    ||||||||| |||||||| || ||||||||||||||| | |||||| | |  ||||| |||||| ||||||||||| |||  |||| ||||||    
T  26365888 ataatacttcaatcacacctagtttattttagaaaaatatgttatatagtttgtaatataaaaaagaaaagtaaactctcaactcccttcccc 26365796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 18063685 - 18063784
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaa--agtaaaccctcccctccattcccctctta 115  Q
    ||||||||| ||||||||||||||||||||| |||||    |||||  |||| ||||||||||| ||||  |||||  ||||| |||| ||||||| |||    
T  18063685 ataatacttcaatcacacttaatttattttaaaaaaa----ttatattatccataatttaaaaaagaaaagagtaattcctccactcccttcccctttta 18063780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 33519168 - 33519069
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||  ||||||||||||||| | |||||||  |||||   | |||||||||||||  |||||| | ||||||||||| |||||||| ||||    
T  33519168 ataatacttcaaaaacacttaatttatttcaaaaaaacattttatattgttcgtaatttaaaaaataaaagtgagccctcccctcccttcccctcctaaa 33519069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 98
Target Start/End: Complemental strand, 33655179 - 33655148
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcc 98  Q
    ||||||||||||||||||||||||||||||||    
T  33655179 tccgtaatttaaaaatgaaaagtaaaccctcc 33655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 37925910 - 37925859
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||  |||||| ||||||||||||| |||||||| |||||||    
T  37925910 cgtaatttaaaaaataaaagtgaaccctcccctcccttcccctcctaaaccc 37925859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 40572358 - 40572421
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaa 81  Q
    ||||||||| |||||| |||||||||||||||| |||||  ||||| | |||||||||| ||||    
T  40572358 ataatactttaatcacgcttaatttattttagagaaacatattatatagtccgtaattttaaaa 40572421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 13771019 - 13770969
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||||||||||||| | ||||||| |||||||||| |||||||| ||||    
T  13771019 tccgtaatttaaaaataataagtaaatcctcccctcccttcccctcctaaa 13770969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Original strand, 17853045 - 17853079
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||||||||||||||| |||||||||||    
T  17853045 cgtaatttaaaaatgaaaagtaagccctcccctcc 17853079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 19261967 - 19262048
Alignment:
Q  22 tacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcca 104  Q
    ||||| ||||||| ||||||||||||  |||| ||  ||| ||| || ||||||||||| |||||||||| ||||||||||||    
T  19261967 tacttcaatcacaattaatttatttttcaaaa-cattttaaagagtctgtaatttaaaattgaaaagtaagccctcccctcca 19262048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 33519224 - 33519274
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||| | ||||||||| ||||||||||| |||||||| |||||||    
T  33519224 gtaatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccc 33519274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 35422137 - 35422190
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||| |||| |||||||||||||||| ||| ||| ||||| |||||||    
T  35422137 tccgtaattttaaaaagaaaagtaaaccctccactctatttccctcctaaaccc 35422190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 37620951 - 37621000
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||| |||||| |||||||||||||| ||||| ||| ||||||    
T  37620951 taatttaaaaaagaaaagcaaaccctcccctcccttcccttctcaaaccc 37621000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 43230408 - 43230461
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||| |||||||||| ||||||| | |||| ||| |||||||    
T  43230408 tccgtaatttaaaaataaaaagtaaactctccccttctttcctctcataaaccc 43230461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 201
Target Start/End: Original strand, 7666974 - 7667042
Alignment:
Q  133 acaccctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatata 201  Q
    ||||| ||||| || ||||||||||||||||| || |||| | || ||| |||| ||||||||||||||    
T  7666974 acaccttaaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatata 7667042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 31543196 - 31543318
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||   ||| ||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  31543196 ataatacttcaatcacacttaatttattttagaaaaacatgttatatggtccataatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 31543295  T
Q  118 cccataatcaaaaacacaccctaa 141  Q
    |||  ||||  |||||||||||||    
T  31543296 ccctcaatc-gaaacacaccctaa 31543318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 7503078 - 7503172
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||||  |||||||    
T  7503078 ataatactttaatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaacgaaaagtaaaccctcccctcccctcccctc 7503172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 11575530 - 11575632
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||||||||||||||||| ||| | || ||||    
T  11575530 ataatactttaatcacacttaatttattttagaaaaacatgttatataatttgtaatttaaaaatgaaaagtaaaccctcccctcccttctcatcctaaa 11575629  T
Q  118 ccc 120  Q
    |||    
T  11575630 ccc 11575632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 42650460 - 42650541
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctccc 99  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||||| ||||||||||| |||||    
T  42650460 ataatacttcaatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacgaaaagtaaactctccc 42650541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 16653069 - 16652987
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccc 100  Q
    ||||||||| |||||||||| |||||||||| ||||||| |||||| | ||||||||||||||| ||||||||||||||||||    
T  16653069 ataatacttcaatcacacttgatttattttataaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccctcccc 16652987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 1026973 - 1027092
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||| |||||||||||||||||||||||  ||||| | ||||||||||||||| ||||||| |||||| |||||| ||||| || ||||    
T  1026973 ataatacttcaatcatacttaatttattttagaaaaacat-ttatatagtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccttcctaaa 1027071  T
Q  118 cccataatcaaaaacacaccct 139  Q
    ||| |||||  |||||||||||    
T  1027072 cccttaatc-caaacacaccct 1027092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 1281263 - 1281161
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| || ||||||| |||||| ||||||||||| ||||||   ||||||||||||||| ||||||||||||||| | ||| |||||||| ||||    
T  1281263 ataatacttcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaa 1281164  T
Q  118 ccc 120  Q
    |||    
T  1281163 ccc 1281161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 31543143 - 31543090
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31543143 tccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccc 31543090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 41103630 - 41103709
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctc 97  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| |    |||||||||||| |||||||||||||||    
T  41103630 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagcttgtaatttaaaaaagaaaagtaaaccctc 41103709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 2248562 - 2248472
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    |||||||||| |||||||||||||||||| |||||| || |||||||||||||| | ||| | ||| ||||||||| |||||||| |||||    
T  2248562 aatcacacttgatttattttagaaaaacatgttatataaaccgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaac 2248472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 7979260 - 7979170
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcc 108  Q
    ||||||||| |||  ||||| |||||||||||||||||| |||||| | ||||||||||||||| ||||||||||| |||| |||| ||||    
T  7979260 ataatacttcaattgcacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaactctcctctcccttcc 7979170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 29358463 - 29358565
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatg-aaaagtaaaccctcc-cctccattcccctctta 115  Q
    ||||||||| |||||||||||||||||| |||||||| | |||||| |||||||| |||||||||| |||||||||| |||| | ||| |||||||| ||    
T  29358463 ataatacttcaatcacacttaatttattctagaaaaatatgttatataatccgtagtttaaaaatgaaaaagtaaacactcctcttcctttcccctcgta 29358562  T
Q  116 aac 118  Q
    |||    
T  29358563 aac 29358565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 30479841 - 30479943
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||||| |||||||||||||||||| |  ||| | || ||| |||||||| ||||| |||||||||| ||||||||| ||| ||||    
T  30479841 ataatacttcaatcacacttgatttattttagaaaaacatgacatatagtctgtagtttaaaaaagaaaactaaaccctccgctccattcctctcataaa 30479940  T
Q  118 ccc 120  Q
    |||    
T  30479941 ccc 30479943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 67 - 233
Target Start/End: Original strand, 43732860 - 43733024
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacccataatcaaaaacacaccctaaggattcgtttgggagtttggaggag 166  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |||||||   |||  |||||||||||||   || |||||||||||||| || |    
T  43732860 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatc-caaacacaccctaatactttgtttgggagtttgg-gggg 43732957  T
Q  167 aggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttg 233  Q
    |||||||| || ||  |||||||||  ||| | ||  |  ||||||  |||||||||||||||||||    
T  43732958 aggggaagggagggttttggagggtgagaattgtatagagaaatggagaaatctttcacattttttg 43733024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 37032499 - 37032418
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctccc 99  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||| | || |||||||||||| ||||| ||||| |||||    
T  37032499 ataatactttaatcacacttaatttattttaaaaaaacatgttatatagtctgtaatttaaaaaagaaaaataaactctccc 37032418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 4429644 - 4429592
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  4429644 ttggagggttgaaaatatatgggaaaatggtaaaatctttcacattttttgaa 4429592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 6315182 - 6315119
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaa 81  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||| |||||    
T  6315182 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattaaaaaa 6315119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 38198173 - 38198258
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcca 104  Q
    ||||||||| |||||||||||||| |||||| |||||||| ||||||  || ||||||||||||||||||||||  |||||| ||||    
T  38198173 ataatacttcaatcacacttaattcatttta-aaaaacactttatagtgtctgtaatttaaaaatgaaaagtaagtcctcccatcca 38198258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 11785646 - 11785561
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| |||| || ||||| ||||||||||||||| |||||| | | | ||||||||||| ||||||||||| |||||||||    
T  11785646 ataatacttcaatcgcaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaactctcccctcc 11785561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 37923202 - 37923311
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattccc-ctcttaa 116  Q
    |||||| || |||| |||||||||||||||||||||||| |||||| | || ||||||||||||| || | |||||||| || ||| ||||| ||| |||    
T  37923202 ataatattttaatcgcacttaatttattttagaaaaacatgttatatagtctgtaatttaaaaataaatattaaacccttccatcccttccctctcctaa 37923301  T
Q  117 acccataatc 126  Q
    |||| |||||    
T  37923302 acccttaatc 37923311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 11224445 - 11224525
Alignment:
Q  139 taaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatc 219  Q
    ||||| || ||||||||||||  ||||||| ||||| |||||| || |||||||| ||||||||| |||||||||||||||    
T  11224445 taaggctttgtttgggagtttataggagagaggaagggaaggctttagagggttgaaaatataggagaaaatggtaaaatc 11224525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 16653122 - 16653174
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacc 119  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  16653122 tccgtaatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaacc 16653174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 3726979 - 3727078
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||| || |||||  |||||||||||||||||||||| |||||| | || ||||| |||||| ||||||||||| ||| ||||| || ||||| ||||    
T  3726979 ataatatttcaatcatgcttaatttattttagaaaaacatgttatatagtctgtaatctaaaaaagaaaagtaaactctcacctccctttccctcctaaa 3727078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 95
Target Start/End: Complemental strand, 11033527 - 11033460
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccc 95  Q
    |||||||| |||||||||||||||||||| | |||| | ||||| ||||||||| |||||||||||||    
T  11033527 aatcacacataatttattttagaaaaacatgatatatagtccgttatttaaaaaagaaaagtaaaccc 11033460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 36309018 - 36309069
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||| ||||||||||||||||||||||| |||||||| |||||||    
T  36309018 cgtaatttaaagatgaaaagtaaaccctcccctcccttcccctcctaaaccc 36309069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 5941282 - 5941224
Alignment:
Q  186 gagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    |||||||||||||||  ||||||||| ||||||||||||||||||||||| || |||||    
T  5941282 gagggttggaaatattagggaaaatgataaaatctttcacattttttgaaagagtaatt 5941224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 9718603 - 9718705
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||| |||||  |||||||||||| | |||||| | | | ||||||||||| |||||||||||  |||||||| ||| |||| ||||    
T  9718603 ataatacttcaatcacaattaatgaattttagaaaaatatgttatatagttcataatttaaaaaagaaaagtaaactttcccctcccttctcctcctaaa 9718702  T
Q  118 ccc 120  Q
    |||    
T  9718703 ccc 9718705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 10028230 - 10028128
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||| |||| || |||||||||||||||||| ||||| | ||||||   ||||||||||||||| ||||||||||  ||| |||||  ||||||| ||||    
T  10028230 ataagacttcaaccacacttaatttattttaaaaaaatatgttatatggtccgtaatttaaaaaagaaaagtaaaatctcacctcctatcccctcctaaa 10028131  T
Q  118 ccc 120  Q
    |||    
T  10028130 ccc 10028128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 12022267 - 12022369
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||  ||||||||||||||||| |||||||  ||| |   |||||||||||||||  |||||| | ||||||||||| |||||||| ||||    
T  12022267 ataatacttcaaaaacacttaatttattttaaaaaaacattttacattgtccgtaatttaaaaaataaaagtgagccctcccctcctttcccctcctaaa 12022366  T
Q  118 ccc 120  Q
    |||    
T  12022367 ccc 12022369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 28083862 - 28083760
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||  ||||||||||||||||||||||| ||||| ||||||   || |||||||||||| |||||  |||  ||| ||||| |||||||| ||||    
T  28083862 ataatactccaatcacacttaatttattttagagaaacatgttatattgtctgtaatttaaaaaagaaaaacaaaatctctcctcccttcccctcctaaa 28083763  T
Q  118 ccc 120  Q
    |||    
T  28083762 ccc 28083760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 30664481 - 30664407
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaa 92  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||| | || | |||||||||| ||||| ||||    
T  30664481 ataatacttcaatcacacttaatttatttttgaaaaacatgttataaagtctgcaatttaaaaaagaaaaataaa 30664407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 40990308 - 40990398
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcc 108  Q
    ||||||||| ||||| ||||||||||||||| | ||||| |||||| | ||||||||||||||| |||||  |||| ||| ||||| ||||    
T  40990308 ataatacttcaatcagacttaatttattttaaagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaactctctcctcccttcc 40990398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 35616825 - 35616730
Alignment:
Q  138 ctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttga 234  Q
    |||||| || ||||| ||||| ||||| |||||| ||||||| | |||||||||| ||||||||||| ||||| || ||||||||| | ||||||||    
T  35616825 ctaaggctttgtttgagagttaggaggggagggggagagaagactttggagggtttgaaatatagggaaaaatagt-aaatctttctctttttttga 35616730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 37388496 - 37388448
Alignment:
Q  187 agggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  37388496 agggttgaaaatataaaggaaaatggtaaaatctttcacattttttgaa 37388448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 13405077 - 13404994
Alignment:
Q  37 taatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||| |||||| | || || ||||||||| |||||||||   ||||| ||| |||||||| |||||||    
T  13405077 taatttattttagaaaaacatgttatatagtctgttatttaaaaaagaaaagtaatttctcccatcccttcccctcctaaaccc 13404994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 33922637 - 33922550
Alignment:
Q  21 atacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcc 108  Q
    |||||| ||||| ||| ||||||||||| ||||| | |||||| | |||| |||||||||| ||||||||||| ||||| ||| ||||    
T  33922637 atacttcaatcatactaaatttattttaaaaaaatatgttatatagtccggaatttaaaaaagaaaagtaaactctcccttcccttcc 33922550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 31738543 - 31738441
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||| |||||||||||||| |||| ||||| |||||| | || ||||||||||||  ||||  |||| ||||| ||  |||||||| ||||    
T  31738543 ataatacttcaattacacttaatttattctagagaaacatgttatatagtctgtaatttaaaaaaaaaaaaaaaactctcccttctcttcccctcctaaa 31738444  T
Q  118 ccc 120  Q
    |||    
T  31738443 ccc 31738441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 1281316 - 1281369
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||| |||| |||||||||| ||||  ||||||||||    
T  1281316 tccgtaatttaaaaatgaaaactaaatcctcccctcccttcctatcttaaaccc 1281369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 30581986 - 30582031
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  30581986 tccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctc 30582031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 1026920 - 1026884
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||| ||||||||||||||||||||||||||||||||    
T  1026920 tccgcaatttaaaaatgaaaagtaaaccctcccctcc 1026884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 8815316 - 8815367
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||| |||||| ||||||||||||| | |||||| |||||||    
T  8815316 cgtaatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccc 8815367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 11961383 - 11961426
Alignment:
Q  189 ggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||    
T  11961383 ggttggaaatatatgggaaaatgttaaaatgtttcacatttttt 11961426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 30479785 - 30479738
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||||||||||||||||| ||| ||||||||||| |||||| ||||    
T  30479785 gtaatttaaaaatgaaaagtgaactctcccctccatccccctcctaaa 30479738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 40676781 - 40676824
Alignment:
Q  189 ggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||    
T  40676781 ggttgaaaatataggagaaaattgtaaaatctttcacatttttt 40676824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 4247641 - 4247679
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaaca 56  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  4247641 ataatacttaaatcatacttaatttattttaaaaaaaca 4247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 12022212 - 12022170
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccct 111  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||    
T  12022212 cgtaatttaaaaaagaaaagtaagccctcccctcccttcccct 12022170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 117
Target Start/End: Original strand, 16024327 - 16024376
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||| ||||    
T  16024327 tccgtaatttaaaaa-gaaaagtaaactctcccctcccttcccctcctaaa 16024376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 34349980 - 34349918
Alignment:
Q  139 taaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatata 201  Q
    ||||| || ||||||||||||||||| || || | | |||||| |||||||||||||||||||    
T  34349980 taaggttttgtttgggagtttggaggggaaggaaggggaaggctttggagggttggaaatata 34349918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 34633857 - 34633819
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaaca 56  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  34633857 ataatacttcaatcacacttgatttattttagaaaaaca 34633819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 2248625 - 2248666
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcc 108  Q
    |||||||||||||||| |||||| ||||||||||||| ||||    
T  2248625 tccgtaatttaaaaataaaaagtgaaccctcccctcccttcc 2248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 3726934 - 3726881
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||| |||||| |||  ||| |||||||| |||||||    
T  3726934 tccgtaatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccc 3726881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 10028296 - 10028349
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||| | |||||||||||||||||||  |||| ||| |||||||    
T  10028296 tccgtaatttaaaagtaaaaagtaaaccctcccctcacttcctctcctaaaccc 10028349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 31738596 - 31738649
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||  |||||||||||||   |||||||| |||||||    
T  31738596 tccgtaatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccc 31738649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 26167828 - 26167752
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacccataatcaaaaacacaccctaagg 143  Q
    ||||||||||||||| ||||| |||  | || |||||||||||||  ||||||   ||||| |||||||||||||||    
T  26167828 tccgtaatttaaaaaagaaaattaagtcatctcctccattccccttataaaccttcaatcagaaacacaccctaagg 26167752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 30365199 - 30365128
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacccataatcaaaaacacaccctaa 141  Q
    |||||||||||||| |||||| ||| ||||||||| ||| |||| |||||||  ||||  |||||||||||||    
T  30365199 cgtaatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatc-caaacacaccctaa 30365128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 31305648 - 31305688
Alignment:
Q  195 aaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||||||||||||| | |||||| |||||||||||||||    
T  31305648 aaatataggggaaaattgaaaaatccttcacattttttgaa 31305688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 25655096 - 25655198
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||  ||||||||||||||| ||| |||||| ||    
T  25655096 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaagttaaaccctcccctcccttctcctcttcaa 25655195  T
Q  118 ccc 120  Q
    |||    
T  25655196 ccc 25655198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 32859073 - 32858989
Alignment:
Q  160 ggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  32859073 ggaggggaggggaagggaaggctttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaaagagtaatt 32858989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 24560337 - 24560217
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||| | | ||||||||||||||| |||||  |||||||||||||| |||||||| ||||    
T  24560337 ataatacttcaatcacatttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaa 24560238  T
Q  118 cccataatcaaaaacacaccct 139  Q
    ||| |||||  |||||||||||    
T  24560237 cccttaatc-caaacacaccct 24560217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 112
Target Start/End: Original strand, 30200219 - 30200309
Alignment:
Q  22 tacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    ||||| |||||||||| |||||||||||||||||| |||||| | ||||||||||||||| |||||||||||||| |||||| ||||||||    
T  30200219 tactttaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaacccttccctcccttcccctc 30200309  T

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Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 36598508 - 36598412
Alignment:
Q  138 ctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||| || ||||||||||||||||| |||||||||||||| | ||| |||||||||||||| | | ||||||||||||||||||||||||||||||    
T  36598508 ctaaggttttgtttgggagtttggaggggaggggaagagaagactttgaagggttggaaatat-gagaaaaatggtaaaatctttcacattttttgaa 36598412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 28582633 - 28582732
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| || ||||||| |||||| ||||||||||| ||||||   ||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  28582633 ataatacttcaaccacacttgatttatcttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 28582732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 41110445 - 41110539
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||  | ||||||||||||||| |||||||||||| ||| |||| ||||||||    
T  41110445 ataatacttcaatcacacttaatttattttcgaaaaacatgttatctagtccgtaatttaaaaacgaaaagtaaaccttcctctcccttcccctc 41110539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 21773902 - 21773801
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||| | ||||||||||| ||| |||||||| ||||| || ||| |||||||| ||||    
T  21773902 ataattcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttagaaaagaaaagtatacccttccttcccttcccctcctaaa 21773803  T
Q  118 cc 119  Q
    ||    
T  21773802 cc 21773801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 651851 - 651769
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccc 100  Q
    |||||| || ||||||||||||||||||||||||||||| |||||| | ||  ||||||||||| ||||||||||||||||||    
T  651851 ataatattttaatcacacttaatttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctcccc 651769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 2387884 - 2387969
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||| || ||||||||||||||||||||||||||||| |||||| |  |||| ||||| ||| |||||||||||||||||||||    
T  2387884 ataataatttaatcacacttaatttattttagaaaaacatgttatatagaccgtgatttagaaaagaaaagtaaaccctcccctcc 2387969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 14898096 - 14897996
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||| || ||| | || |||||||||||| ||||||||||   ||| |||| |||||||| ||||    
T  14898096 ataatacttcaatcacacttaatttattttagaaaaacatgtcatatagtctgtaatttaaaaaagaaaagtaaaatttcctctcccttcccctcctaaa 14897997  T
Q  118 c 118  Q
    |    
T  14897996 c 14897996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 33281548 - 33281635
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||||| ||||| || || ||| |||| | ||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  33281548 gtttgggagttaggaggggatggaaagggaagactttggagggttgaaaatataggggaaaatggtaaaaaatttcacattttttgaa 33281635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 46205006 - 46204931
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| | | | ||||||||||| |||||||||||    
T  46205006 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaac 46204931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 220521 - 220623
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||| |||| ||||| |||| |||||||||||||||||| |||| | | ||||||||||||||| ||||||||||  ||||||||| ||| |||| ||||    
T  220521 ataacacttcaatcatacttgatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaa 220620  T
Q  118 ccc 120  Q
    |||    
T  220621 ccc 220623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 1132778 - 1132856
Alignment:
Q  166 gaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||||||| |||||| || ||||||||||||||||| |||||||  ||||||||||||||||||||||| || |||||    
T  1132778 gaggggaagggaaggctttagagggttggaaatatagtggaaaattataaaatctttcacattttttgaaagagtaatt 1132856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 10748421 - 10748484
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaa 81  Q
    |||||||||  |||||||||||||||||||||||||||| |||||| | |||||||||||||||    
T  10748421 ataatacttttatcacacttaatttattttagaaaaacatgttatatactccgtaatttaaaaa 10748484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 18654724 - 18654827
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaattt-aaaaatgaaaagtaaaccctcccctccattcccctcttaa 116  Q
    ||||||||| ||| ||||||||||||||||||| ||||| |||||| | |||||||||| ||||| | |||  |||| ||||||||| |||||||| |||    
T  18654724 ataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaaagtaaaacaaactctcccctcccttcccctcctaa 18654823  T
Q  117 accc 120  Q
    ||||    
T  18654824 accc 18654827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 27542055 - 27542157
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||| ||||||||||||||||||| | |||||| | | | ||||||||||| |||||  |||| ||||||||| | |||||| ||||    
T  27542055 ataatacttcaatcacagttaatttattttagaaaaatatgttatatagttcataatttaaaaaagaaaaacaaactctcccctccctgcccctcgtaaa 27542154  T
Q  118 ccc 120  Q
    |||    
T  27542155 ccc 27542157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 37102272 - 37102358
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaa-cacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| || ||||||| |||||||||||||||| || |||||| | ||||||||||||||| || ||||||||| ||||||||    
T  37102272 ataatacttcaaccacacttgatttattttagaaaaaacatgttatatagtccgtaatttaaaaaagataagtaaaccttcccctcc 37102358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 41040074 - 41040164
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcc 108  Q
    ||||||||| |||||| |||| ||||||||| |||| || |||||  ||||||||||||||||  ||||||||||||||| ||||| ||||    
T  41040074 ataatacttcaatcacgcttactttattttaaaaaatcatgttatctaatccgtaatttaaaagcgaaaagtaaaccctctcctcccttcc 41040164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 46556263 - 46556178
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| ||||||||| |||||||||| ||||||||  ||||| | || |||||||||||| ||||| ||||| |||||||||    
T  46556263 ataatacttcaatcacactcaatttattttggaaaaacatattatatagtctgtaatttaaaaaagaaaattaaactctcccctcc 46556178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 52474082 - 52474143
Alignment:
Q  61 atagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacccat 122  Q
    |||| ||||||||||||||||| ||||||||||||||| |||| |||||||| |||||||||    
T  52474082 ataggatccgtaatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaacccat 52474143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 9312595 - 9312683
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaac---acgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||| ||||||||||||||||||||||||||| |   | |||||| | || |||||||||||| |||||  ||||||||||||||    
T  9312595 ataatactcaaatcacacttaatttattttagaaaatcatgatgttatatagtcggtaatttaaaaaagaaaatcaaaccctcccctcc 9312683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 26135970 - 26136023
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||| |||||||    
T  26135970 tccgtaatttaaaaaagaaaagtaaaccctccactcccttcccctcctaaaccc 26136023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 34641163 - 34641216
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| ||||||||| ||||||||||| |||||||| |||||||    
T  34641163 tccgtaatttaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccc 34641216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 52474035 - 52473966
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaa 87  Q
    ||||||||| |||||||  |||||||||||| || |||| |||||| ||||||||||||||||| |||||    
T  52474035 ataatacttcaatcacatgtaatttattttaaaataacatgttatataatccgtaatttaaaaaagaaaa 52473966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 117
Target Start/End: Complemental strand, 25655039 - 25654991
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||| |||||||||||||||||||||||||||| |||||||| ||||    
T  25655039 cgtaatataaaaatgaaaagtaaaccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 54089287 - 54089375
Alignment:
Q  156 gtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||||||| ||||||| | |||||  ||||| ||||||| ||||| || ||||||||||||| ||||| |||||||||| || |||||    
T  54089287 gtttggaggggaggggaggggaaggttttggatggttggagatataaggaaaaatggtaaaatgtttcaaattttttgaaagagtaatt 54089375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Complemental strand, 53888742 - 53888655
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||||||||||| |||||||||  ||||| ||||  ||    |||||||||||||||| |  |||||||||||||||||||||    
T  53888742 gtttgggagtttggaggggaggggaaggaaaggctttgggtggacaaaaatataggggaaaattgagaaatctttcacattttttgaa 53888655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 24560393 - 24560443
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||||||| ||||| ||| |||||||| |||||||    
T  24560393 gtaatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccc 24560443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 41110392 - 41110342
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||||||||||||||||||||||||| || ||||| |||||||| ||||    
T  41110392 tccgtaatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaa 41110342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 49815541 - 49815456
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcca 104  Q
    ||||||||| |||||| |||||||||||||  |||||||  |||||| |   |||||||||||| ||||||||| ||||||||||||    
T  49815541 ataatacttcaatcacgcttaatttattttt-aaaaacattttatagtacttgtaatttaaaaaagaaaagtaagccctcccctcca 49815456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 16275829 - 16275874
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttata 63  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||    
T  16275829 ataatacttcaatcacacttgatttattttagaaaaacatgttata 16275874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 37237038 - 37236962
Alignment:
Q  22 tacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctccc 99  Q
    ||||| ||||||||||||||||||||  |||||||  || |||  || |||||||||||||||||||||| |||||||    
T  37237038 tacttcaatcacacttaatttattttc-aaaaacattttgtagcgtctgtaatttaaaaatgaaaagtaagccctccc 37236962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 54574485 - 54574554
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaa 87  Q
    ||||||||| |||||| |||||||||||||||||||||  |||||| | || |||||| ||||| |||||    
T  54574485 ataatacttcaatcacgcttaatttattttagaaaaacgtgttatatagtctgtaattaaaaaaagaaaa 54574554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 23568284 - 23568232
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||||| | |||||||| |||||||| |||||||||||| |||||||||||    
T  23568284 ttggagggcttgaaatataagggaaaatagtaaaatctttcgcattttttgaa 23568232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 30121336 - 30121400
Alignment:
Q  137 cctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatata 201  Q
    ||||||| || ||||||||||||||||| ||||||| | || ||| |||| ||||||||||||||    
T  30121336 cctaaggctttgtttgggagtttggaggggaggggaggggagggctttggggggttggaaatata 30121400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 30200159 - 30200123
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||||||||||||| |||||||||||||||    
T  30200159 tccgtaatttaaaaatgaaaactaaaccctcccctcc 30200123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 37102220 - 37102184
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||||||||||||| |||||||||||||||    
T  37102220 tccgtaatttaaaaatgaaaactaaaccctcccctcc 37102184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 40464005 - 40464097
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||| |||||||||||||||||||||| | |||||  |  || | ||||| ||| ||||||||||| |||||||| ||||| ||| |||||||    
T  40464005 aatctcacttaatttattttagaaaaatatgttatgtagcccttgatttagaaaagaaaagtaaactctcccctctattcctctcataaaccc 40464097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 52185136 - 52185060
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaa-cacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||| ||| | | ||||||||||||||||||| || |||||| |||  |||||||||||| |||||||||||    
T  52185136 ataatacttcaattatatttaatttattttagaaaaaacatgttatataatttgtaatttaaaaacgaaaagtaaac 52185060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 46556318 - 46556368
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    ||||||||| |||||||||||||||| ||||||||||||||| ||| |||||    
T  46556318 tccgtaattgaaaaatgaaaagtaaa-cctcccctccattcctctcctaaac 46556368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Original strand, 21773957 - 21773991
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||||| ||||||||||||||||||||    
T  21773957 cgtaatttaaaaataaaaagtaaaccctcccctcc 21773991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 25180014 - 25179928
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcca 104  Q
    |||||| || |||||||||||| ||||||   || ||||  ||||||  ||| |||||||||||||||||||||  |||||||||||    
T  25180014 ataatatttcaatcacacttaaattatttccaaagaacattttatagtgtccataatttaaaaatgaaaagtaagtcctcccctcca 25179928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 28581254 - 28581216
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcc 108  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  28581254 gtaatttaaaaatgaaaactaaaccctcccctcccttcc 28581216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 31684396 - 31684362
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttat 62  Q
    ||||||||||||||||||||||||||||| |||||    
T  31684396 aatcacacttaatttattttagaaaaacatgttat 31684362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 36569027 - 36569065
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaaca 56  Q
    |||||| || |||||||||||||||||||||||||||||    
T  36569027 ataatagttcaatcacacttaatttattttagaaaaaca 36569065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 13638648 - 13638599
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    |||||| |||| |||||||||| |||||||| |||||||||||| |||||    
T  13638648 ttggagagttgaaaatatagggaaaaatggtcaaatctttcacaattttt 13638599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 15499166 - 15499211
Alignment:
Q  190 gttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||||||  | ||||| ||||||||||||||||||||||||    
T  15499166 gttggaaatatatagaaaaatagtaaaatctttcacattttttgaa 15499211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 24253895 - 24253948
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| |||||||||| ||| |||||| |||||||  |||||||    
T  24253895 tccgtaatttaaaaaagaaaagtaaatccttccctcccttccccttctaaaccc 24253948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 46205065 - 46205118
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||| |||||||||| ||||||||| | | ||||||||||||||| |||||||    
T  46205065 tccgtgatttaaaaattaaaagtaaatctttccctccattcccctcctaaaccc 46205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 55428552 - 55428605
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||| | |||||||||| | |||||||| |||||||| |||||||    
T  55428552 tccgtaatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccc 55428605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 120
Target Start/End: Complemental strand, 36568969 - 36568922
Alignment:
Q  72 aatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||| ||||| |||||||||||||| ||| |||||||    
T  36568969 aatttaaaaatgaaaa-taaactctcccctccattccactcctaaaccc 36568922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 36638008 - 36637968
Alignment:
Q  195 aaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||||||||||||| |  |||||||||||||||||||||    
T  36638008 aaatataggggaaaattgagaaatctttcacattttttgaa 36637968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 40858738 - 40858774
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  40858738 tccgtaatttaaaaaagaaaactaaaccctcccctcc 40858774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 49861101 - 49861005
Alignment:
Q  139 taaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||| || ||||||||||||||||| || |||| | || ||| |||| ||||||||||||||  | |||||||  |||   |||||||||||||||    
T  49861101 taaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatgggcaaaaaattcacattttttgaa 49861005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 54126516 - 54126440
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttca 224  Q
    ||||||||| ||| ||| ||||||||| ||  || |||| |||| ||||||||||||||| ||||  ||||||||||    
T  54126516 gtttgggagattgaaggggaggggaagggagagctttggggggtgggaaatataggggaacatggagaaatctttca 54126440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 2859056 - 2859157
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||| | |||||||||||||||  |||||||||||||||||||| |||||||| ||||    
T  2859056 ataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaatttaaaaaataaaagtaaaccctcccctcccttcccctcctaaa 2859155  T
Q  118 cc 119  Q
    ||    
T  2859156 cc 2859157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 30010452 - 30010329
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| || |||||||||||||||||||||||||| |||||| | ||||||||||||| | |||||||||| |||||||||| |||||||| ||||    
T  30010452 ataatacttcaaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaagtaaatcctcccctcccttcccctcctaaa 30010353  T
Q  118 cccataatcaaaaacacaccctaag 142  Q
    |||  ||||  ||||||||||||||    
T  30010352 ccctcaatc-caaacacaccctaag 30010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 38510018 - 38510126
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||| | |||||| |||||||| ||||| ||||||||||||||| |||||||| ||||    
T  38510018 ataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaa 38510117  T
Q  118 cccataatc 126  Q
    ||| |||||    
T  38510118 cccttaatc 38510126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 10391992 - 10391893
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||| ||||||||||||||||||||| || ||| | ||||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  10391992 ataatactttaatcacaattaatttattttagaaaaacatgtaatatagtccgtaatttaaaaatgaaaagtaaaccctcccctcgtttcccctcctaaa 10391893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 35349586 - 35349708
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||| || |||| ||||||||||||||| | |||||| | ||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  35349586 ataatacttcaataacccttagtttattttagaaaaaaatgttatatagtccgtaatttaaaaacgaaaagtaaaccctcccctcccttcccctcataaa 35349685  T
Q  118 cccataatcaaaaacacaccctaa 141  Q
    ||| |||||  |||||||||||||    
T  35349686 cccttaatc-caaacacaccctaa 35349708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 32951442 - 32951542
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| || | ||||||||||||||| ||||||||||| ||||||||| |||| ||| ||||    
T  32951442 ataatacttcaatcacacttaatttattttagaaaaacatgttctatagtccgtaatttaaaaacgaaaagtaaactctcccctcccttcctctcctaaa 32951541  T
Q  118 c 118  Q
    |    
T  32951542 c 32951542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 52073255 - 52073339
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    |||||||||||||| || ||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  52073255 gtttgggagtttggtggggaggggaagggaaggctctggagggttggaaatataggggaaaattgtaaaatctttcacatttttt 52073339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 15426150 - 15426234
Alignment:
Q  150 ttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||||||||  ||| |||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15426150 ttgggagtttggagaggagcggaagagaagactttggagggttg-aaatataggggaaaatggtaaaatctttcacattttttgaa 15426234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 51597788 - 51597698
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcc 108  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||| | ||||| ||||||||| ||||||||||| ||||||||| ||||    
T  51597788 ataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtgatttaaaaaagaaaagtaaactctcccctcccttcc 51597698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 26940967 - 26941052
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |||||||| ||||| | |||| ||||||||    
T  26940967 ataatacttcaatcacacttgatttattttagaaaaacatgttatagaatccgtattttaaaaaagaaaattgaaccttcccctcc 26941052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 12234120 - 12234028
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||| |||||||||||||||||| |||||| | ||||||||||||||| ||||| ||| |||| |||||| |||||||| |||||||    
T  12234120 aatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccc 12234028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 8529919 - 8529834
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| ||||||||||||||||||| | ||||||| |||||| | |  |||||||||||| |||||||||||||||||||||    
T  8529919 ataatacttcaatcacacttaatttatttaaaaaaaacatgttatatagtttgtaatttaaaaaagaaaagtaaaccctcccctcc 8529834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 233
Target Start/End: Original strand, 41432587 - 41432672
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttg 233  Q
    ||||||||||||||||| || |||||   ||||| ||||||||||||||||| |||||||| |||||||||||||||| |||||||    
T  41432587 gtttgggagtttggaggggaagggaaagaaaggctttggagggttggaaatacaggggaaattggtaaaatctttcacgttttttg 41432672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 50744405 - 50744490
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| ||||||||||||||||||||||| ||||  |||||| | ||||||||||||||| |||||  ||||||||||||||    
T  50744405 ataatacttcaatcacacttaatttattttagagaaacctgttatatagtccgtaatttaaaaaagaaaaacaaaccctcccctcc 50744490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 40095057 - 40095136
Alignment:
Q  18 ataatacttaaatcacacttaatttattttag-aaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccct 96  Q
    ||||||||| |||||||||||||||||||||| ||||||| |||||| | || |||||||||||| ||||||||||||||    
T  40095057 ataatacttcaatcacacttaatttattttagaaaaaacatgttatatagtctgtaatttaaaaacgaaaagtaaaccct 40095136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 44211029 - 44211114
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |  | |||||||| ||| |||| ||||| | ||||||||    
T  44211029 ataatacttcaatcacacttaatttattttagaaaaacacgttatatagactgtaatttataaaagaaatgtaaatcttcccctcc 44211114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 33579509 - 33579413
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||||||||||| ||||||  ||||  |||||  ||||||||||||||||||||||| |||||||||| ||||| ||| |||||||| || |||||    
T  33579509 gtttgggagtttgaaggagaaaggaatggaaggttttggagggttggaaatatagggggaaatggtaaagtcttttacaatttttgaaagagtaatt 33579413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 41498524 - 41498422
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||||||| ||||  ||||||| || |||| | | | | ||||||||||| ||||||||||||||||||||  |||||||| ||||    
T  41498524 ataatacttcaatcacacttaacttatcgtagaaaatcatgttaaatagttcataatttaaaaacgaaaagtaaaccctcccctcacttcccctcctaaa 41498425  T
Q  118 ccc 120  Q
    |||    
T  41498424 ccc 41498422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 12234183 - 12234236
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  12234183 tccgtaatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccc 12234236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 40095004 - 40094951
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  40095004 tccgtaatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccc 40094951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 43553068 - 43553129
Alignment:
Q  32 acacttaatttattttagaaaaacacgttatagaatccgt-aatttaaaaatgaaaagtaaa 92  Q
    ||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||    
T  43553068 acacttaatttattttagagaaacaagttatataatccgtaaatttaaaaatgaaaagtaaa 43553129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 49832667 - 49832566
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||| ||||||||  |||||||| |||||  ||| |||||||||||| ||||||||| | |||| |||  |||||||| ||||    
T  49832667 ataatacttcaatcacacttattttatttttaaaaaacactttatattatctgtaatttaaaaaagaaaagtaagctctcctctcacttcccctcctaaa 49832568  T
Q  118 cc 119  Q
    ||    
T  49832567 cc 49832566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 17416578 - 17416628
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttg 233  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||    
T  17416578 ttggagggttggaaatataggagaaaatggtacaatctttcacagtttttg 17416628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 35349535 - 35349484
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  35349535 tccgtaatttaaaaatgaaaagtaaaccctccccccc--tcccctcttaaaccc 35349484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 30010505 - 30010558
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||| |||||||||||||||||||||||||| |||||||  |||||||    
T  30010505 tccgtaatttcaaaatgaaaagtaaaccctcccctcccttccccttctaaaccc 30010558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 38509965 - 38509912
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||| |||||||| |||| |||||||| |||||||    
T  38509965 tccgtaatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccc 38509912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 49102790 - 49102887
Alignment:
Q  138 ctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||| || ||||||||||||||||| |||||||||  | ||| |||| |||   ||||||||||| ||||| |  |||||||||||||||||||||    
T  49102790 ctaaggctttgtttgggagtttggaggggaggggaaggaagggctttggggggagagaaatatagggaaaaattgagaaatctttcacattttttgaa 49102887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 30543193 - 30543284
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||||||||||||||| |||||||||     || | ||| |||| |||||||| || ||||||||||||||||| |||||||||||| || |||||    
T  30543193 gtttgggagtttggaggggaggggaag-----gcttcggaaggttcgaaatatacggaaaaatggtaaaatcttttacattttttgaaagaataatt 30543284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 34749875 - 34749927
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||| |||| |||||||| ||| |||||||||||||||||||||||||||||    
T  34749875 ttggatggtttgaaatatacggggaaatggtaaaatctttcacattttttgaa 34749927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 41676437 - 41676489
Alignment:
Q  50 aaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctc 102  Q
    |||||||  ||||||  ||||||||||||||||||||||||||||||||||||    
T  41676437 aaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctc 41676489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 93
Target Start/End: Original strand, 45585820 - 45585884
Alignment:
Q  29 atcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    |||||||||||||||||||| ||||||| |||||| | |||||||||| || | |||||||||||    
T  45585820 atcacacttaatttattttaaaaaaacatgttatatagtccgtaattttaagaggaaaagtaaac 45585884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 9312801 - 9312887
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||||||||||| ||||| || ||||| | ||||||| ||| ||||||| | ||||||| |||||||||||  ||||||||||    
T  9312801 gtttgggagtttggaggggagggaaaaagaagactttggagg-ttgaaaatataagagaaaatgataaaatctttcttattttttgaa 9312887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 39509036 - 39508941
Alignment:
Q  136 ccctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttt 231  Q
    |||||||| || ||||||||||||||||| ||||||||| ||  || |||| | || |||||||||  | ||||||  ||||||||||||||||||    
T  39509036 ccctaaggctttgtttgggagtttggaggggaggggaagggagagctttggcgagtgggaaatatatagaaaaatgaaaaaatctttcacattttt 39508941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 50587299 - 50587205
Alignment:
Q  137 cctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||||| || ||||||||||||||| | ||||||||| |  ||| ||| ||||| ||||||| ||||||||||||  ||||||| ||||||||||    
T  50587299 cctaaggctttgtttgggagtttggaagggaggggaagggg-ggctttgaagggtgggaaatagaggggaaaatggagaaatcttacacatttttt 50587205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 2859000 - 2858950
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||| ||||||||||||||||||||||||| || ||||| |||||||    
T  2859000 gtaatttagaaatgaaaagtaaaccctcccctccctttccctcctaaaccc 2858950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 20576204 - 20576151
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||  ||||| ||||||||| |||||||| |||||||    
T  20576204 tccgtaatttaaaaatgaaatctaaactctcccctcccttcccctcctaaaccc 20576151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 9314873 - 9314951
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttgg---agggttggaaatataggggaaaatggtaaaatctttc 223  Q
    ||||||||||||||||| ||||||||||| || | ||||   ||||||| ||||| ||| ||||||| |||||||||||    
T  9314873 gtttgggagtttggaggggaggggaagagcagactttggatcagggttgaaaatacaggagaaaatgctaaaatctttc 9314951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 104
Target Start/End: Complemental strand, 27739169 - 27739086
Alignment:
Q  20 aatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcca 104  Q
    ||||||| |||||||||||||| |||||| |||||||  |||||| ||   ||||||||||  ||||||||| ||||||||||||    
T  27739169 aatacttcaatcacacttaattgatttta-aaaaacattttatagtatttataatttaaaagagaaaagtaagccctcccctcca 27739086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 41498577 - 41498613
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||||||||||||||||| ||||||||||    
T  41498577 tccgtaatttaaaaatgaaaagtaaatcctcccctcc 41498613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 49946712 - 49946804
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccc 110  Q
    ||||||||| ||||||| ||||||||||||| ||||||| |||||| | ||  |  |||||| | ||||||||||||||| | ||| ||||||    
T  49946712 ataatacttcaatcacatttaatttattttaaaaaaacatgttatatagtctctggtttaaacaagaaaagtaaaccctcacatcccttcccc 49946804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 2470869 - 2470944
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||| ||| | ||||||||||||||| |||||| | |   ||||||||||| |||||||||||| ||||||||    
T  2470869 aatcacaattagtgtattttagaaaaacatgttatatagttgataatttaaaaaagaaaagtaaaccttcccctcc 2470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 8529972 - 8530023
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    |||||||||||||||||||||||||||  || ||||| |||||||| |||||    
T  8529972 tccgtaatttaaaaatgaaaagtaaactttcacctcccttcccctcctaaac 8530023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 232
Target Start/End: Complemental strand, 17557047 - 17556964
Alignment:
Q  149 tttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    |||||||||||||||| |||||||||  ||||| |||   || | ||||||||||| ||||| |  ||||||||||||||||||    
T  17557047 tttgggagtttggaggggaggggaaggaaaggctttgcgaggatagaaatatagggaaaaatagagaaatctttcacatttttt 17556964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 718440 - 718482
Alignment:
Q  189 ggttggaaatataggggaaaatggtaaaatctttcacattttt 231  Q
    ||||| |||||||||| |||||| |||||||||||||||||||    
T  718440 ggttgcaaatatagggaaaaatgataaaatctttcacattttt 718482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 34285709 - 34285786
Alignment:
Q  157 tttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||| | ||||||||  |||||  ||||||||||||| |||||| ||  |||||||||| |||||||||||||||||    
T  34285709 tttggatgggaggggaaaggaaggatttggagggttggagatatagagggtaatggtaaaa-ctttcacattttttgaa 34285786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 40709361 - 40709311
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacc 119  Q
    ||||||||||||| |||||||||  ||||| |||| |||||||||||||||    
T  40709361 cgtaatttaaaaaagaaaagtaagtcctcctctcccttcccctcttaaacc 40709311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 50476795 - 50476697
Alignment:
Q  137 cctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||| || ||||||||||||||||| || ||| || || ||  |||||||||  ||||||||  |  ||||||  |||||||||||||||||||||    
T  50476795 cctaaggctttgtttgggagtttggaggggaagggtagggagggttttggagggtgagaaatatatagagaaatggagaaatctttcacattttttgaa 50476697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 6563697 - 6563609
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattc 107  Q
    |||||| || ||| |||| |||||||||||||||| ||| |||||| | || || ||||||||| ||||| |||||||||| ||| ||||    
T  6563697 ataataattcaatgacacataatttattttagaaagacatgttatatagtctgtcatttaaaaaagaaaa-taaaccctcctctcaattc 6563609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 7444549 - 7444504
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    ||||||||||||||| ||||||||||||||||| ||| ||| ||||    
T  7444549 tccgtaatttaaaaaagaaaagtaaaccctcccttcccttctcctc 7444504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 25268437 - 25268490
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| | ||||||||||||||||||  |||||||  |||||||    
T  25268437 tccgtaatttaaaaaaggaaagtaaaccctcccctcacttccccttctaaaccc 25268490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 35512974 - 35513023
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||  |||||||| ||||||||||| |||||||| |||||||    
T  35512974 taatttaaaaaataaaagtaagccctcccctcccttcccctcctaaaccc 35513023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 40964772 - 40964804
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctccc 99  Q
    ||||||||||||||||||||||||||| |||||    
T  40964772 tccgtaatttaaaaatgaaaagtaaactctccc 40964804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 41676399 - 41676363
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaa 54  Q
    ||||||||  |||||||||||||||||||||||||||    
T  41676399 ataatactacaatcacacttaatttattttagaaaaa 41676363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 42230658 - 42230575
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctc 102  Q
    ||||||||| ||||||||||||||||||||  ||||||| |||| | ||||  |||||| ||||  |||||||||  ||||||||    
T  42230658 ataatacttcaatcacacttaatttatttttaaaaaacatgttaaataatcaataattttaaaa-aaaaagtaaattctcccctc 42230575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 43036138 - 43036230
Alignment:
Q  138 ctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttt 230  Q
    |||||| || ||||||||||||||||| |||||||||  | ||| |||  ||||  |||||| | |||||||| | ||||||||| |||||||    
T  43036138 ctaaggctttgtttgggagtttggaggggaggggaaggaagggctttgtggggtgagaaatagaagggaaaattgaaaaatcttttacatttt 43036230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 13634831 - 13634729
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||| || |||||||| |||||||||||||||||||| |||||| | ||||| ||||||||| ||||||||||||||||||||| |||||||| ||||    
T  13634831 ataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 13634732  T
Q  118 ccc 120  Q
    |||    
T  13634731 ccc 13634729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 26415013 - 26414911
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||| ||||||||||||||| || ||| | ||||||||||||||| ||||||||||||||||||||| ||| |||| ||||    
T  26415013 ataatacttcaatcacacttaatatattttagaaaaacatgtcatatagtccgtaatttaaaaacgaaaagtaaaccctcccctcccttctcctcctaaa 26414914  T
Q  118 ccc 120  Q
    |||    
T  26414913 ccc 26414911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 9684616 - 9684712
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||||||||||||||| || |||||| |||||| | |||||||||||||||||||||||||||| |||||||| ||||||||||||| || |||||    
T  9684616 gtttgggagtttggaggggaagggaagggaaggcttaggagggttggaaatataggggaaaatgggaaaatcttccacattttttgaaagagtaatt 9684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 16938599 - 16938477
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||| || ||||||||||||||||||||||| ||||| |||||| | ||||||| ||||||| |||||  |||||||||||||| |||||||| ||||    
T  16938599 ataatatttcaatcacacttaatttattttagagaaacatgttatatagtccgtaacttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaa 16938500  T
Q  118 cccataatcaaaaacacaccctaa 141  Q
    |||  ||||  |||||||||||||    
T  16938499 ccctcaatc-caaacacaccctaa 16938477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 2550476 - 2550578
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||| ||||||||| |||||||||| |||||| | |||| |  ||||||| ||||||||||||||||||||| |||||||| ||||    
T  2550476 ataatacttcaatcacacgtaatttattatagaaaaacatgttatatagtccgaatcttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 2550575  T
Q  118 ccc 120  Q
    |||    
T  2550576 ccc 2550578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 7544256 - 7544154
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||| | ||||||||||||||| ||||| | | ||||||||||| ||||| || ||||    
T  7544256 ataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaatttagccctcccctcccttcccttcctaaa 7544157  T
Q  118 ccc 120  Q
    |||    
T  7544156 ccc 7544154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 10476148 - 10476044
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgt-tatagaatccgtaa-tttaaaaatgaaaagtaaaccctcccctccattcccctctta 115  Q
    ||||||||| ||||||||||||||||||||||||||||| || |||| |||| |||| |||||||| ||||||||||||||| | ||| |||||||| ||    
T  10476148 ataatacttcaatcacacttaatttattttagaaaaacatgtatatataatctgtaattttaaaaaagaaaagtaaaccctctcatcccttcccctccta 10476049  T
Q  116 aaccc 120  Q
    |||||    
T  10476048 aaccc 10476044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 32 - 99
Target Start/End: Original strand, 20147014 - 20147080
Alignment:
Q  32 acacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctccc 99  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  20147014 acacttaatttattttagaaaaacatgt-atataatccgtaatttaaaaatgaaaagtaaaccctccc 20147080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 10650546 - 10650464
Alignment:
Q  21 atacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||| |||||||||||||||||||||||||||||  | ||||  |||||||||||||||| ||||||||| ||||||||||    
T  10650546 atacttcaatcacacttaatttattttagaaaaacatttcatagtgtccgtaatttaaaaataaaaagtaaatcctcccctcc 10650464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 28279600 - 28279694
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaa-cacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccct 111  Q
    ||||||||| ||||||||||| ||||||||||||||| || |||||| | ||| ||||||||||| ||||||||||||||| ||||| |||||||    
T  28279600 ataatacttcaatcacacttagtttattttagaaaaaacatgttatatattccataatttaaaaaggaaaagtaaaccctctcctcccttcccct 28279694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 9857000 - 9856915
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| |||||||||| |||||||||||||||||| |||||| | ||| ||||||||||| ||||| ||||| |||||||||    
T  9857000 ataatacttcaatcacacttgatttattttagaaaaacatgttatatagtccttaatttaaaaaagaaaactaaactctcccctcc 9856915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 10072771 - 10072872
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||||||   || |||||||||||| |||||||||| | || ||||| || ||||||||||    
T  10072771 ataatacttcaatcatacttaatttattttagaaaaacatgttataccgtcggtaatttaaaaaagaaaagtaaatcttctcctccttttccctcttaaa 10072870  T
Q  118 cc 119  Q
    ||    
T  10072871 cc 10072872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 19389658 - 19389749
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||||||||||||||| |||||||||     || ||||||||||||||||||  |||||||||||||||||||||||| |||||||| || |||||    
T  19389658 gtttgggagtttggaggggaggggaag-----gctttggagggttggaaatatgtgggaaaatggtaaaatctttcacaatttttgaaagattaatt 19389749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 1657969 - 1658039
Alignment:
Q  50 aaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||  ||||||  ||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  1657969 aaaaacattttatagtgtccgtaatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccc 1658039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 235
Target Start/End: Complemental strand, 6816494 - 6816392
Alignment:
Q  133 acaccctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||| ||||| || ||||||||| ||||||| ||| ||||| ||| || || |||||||||||||||| |  |||||| ||||||||||||||||||||    
T  6816494 acaccttaaggttttgtttgggaggttggaggggagtggaagggaatgctttcgagggttggaaatataagacaaaatgctaaaatctttcacatttttt 6816395  T
Q  233 gaa 235  Q
    |||    
T  6816394 gaa 6816392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 9798736 - 9798826
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcc 108  Q
    ||||||||| ||||||| ||||||||||| ||||||||| |||||| |||| ||||||| |||| |||||||||| ||| |||||| ||||    
T  9798736 ataatacttcaatcacaattaatttatttaagaaaaacatgttatataatctgtaattttaaaaagaaaagtaaatccttccctcccttcc 9798826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 42681573 - 42681466
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatt-----taaaaatgaaaagtaaaccctcccctccattcccctc 112  Q
    ||||||||| ||||||||| || |||||||||||||||| |||||| | |||||||||      |||||  ||||||||| |||||||||| ||||||||    
T  42681573 ataatactttaatcacactaaaattattttagaaaaacatgttatatagtccgtaattaaaaaaaaaaaaaaaaagtaaatcctcccctcctttcccctc 42681474  T
Q  113 ttaaaccc 120  Q
    ||||||||    
T  42681473 ttaaaccc 42681466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 36363152 - 36363050
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||| |||| ||| |||||| |||||||||||||||||| |||||| | | |||| |||||| | ||||| ||||| |||||||||||||||||  ||||    
T  36363152 ataaaacttcaatgacacttgatttattttagaaaaacatgttatatagtacgtagtttaaacaagaaaattaaactctcccctccattccccttctaaa 36363053  T
Q  118 ccc 120  Q
    |||    
T  36363052 ccc 36363050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 11419303 - 11419360
Alignment:
Q  36 ttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||||||||||||||| |||||| || |||||||||||||| |||||||||||    
T  11419303 ttaatttattttagaaaaacatgttatataacccgtaatttaaaaaagaaaagtaaac 11419360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 11757076 - 11757129
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  11757076 tccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccc 11757129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 22022960 - 22022865
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaag---taaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||||||| | |||||| | |||||||||||||||  ||||    |||| |||| |||||||||||||| |||||||    
T  22022960 aatcacacttaatttattttagaaaaatatgttatatagtccgtaatttaaaaaaaaaaaaaactaaatcctctcctccattcccctcctaaaccc 22022865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 4373690 - 4373770
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcc 98  Q
    |||||| || ||||||||||||||||||||  ||||||  |||||| | ||||||||||||||| |||||||||| |||||    
T  4373690 ataatatttcaatcacacttaatttatttttaaaaaacttgttatatagtccgtaatttaaaaaagaaaagtaaatcctcc 4373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 11756997 - 11756934
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaa 81  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| | | |||||||||||||    
T  11756997 ataatactttaatcacacttaatttattttagagaaacatgttatatagttcgtaatttaaaaa 11756934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 13634886 - 13634937
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||| ||||||||||| |||||||| |||||||    
T  13634886 cgtaatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccc 13634937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 142
Target Start/End: Original strand, 14245219 - 14245293
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacccataatcaaaaacacaccctaag 142  Q
    |||||||||||||||||||||  |||||||||||||| |||||||| |||||||  ||||  ||||||||||||||    
T  14245219 tccgtaatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatc-caaacacaccctaag 14245293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 8502959 - 8503017
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaattt 76  Q
    ||||||||| |||||||||||||||||||||||||| || |||||| | ||||||||||    
T  8502959 ataatacttcaatcacacttaatttattttagaaaagcatgttatatagtccgtaattt 8503017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 14245159 - 14245106
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||| |||||||    
T  14245159 tccgtaatttaaaaaagaaaagtaaatcctcccctcccttcccctcctaaaccc 14245106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 33682593 - 33682544
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  33682593 ttggagggtcggaaatatagaagaaaatggtaaaatctttcacatttttt 33682544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 36363197 - 36363258
Alignment:
Q  59 ttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||| |||||||||||||||||||||||| ||| ||| ||||| |||||||| |||||||    
T  36363197 ttatagtatccgtaatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccc 36363258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 8502906 - 8502854
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacc 119  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| || ||||||    
T  8502906 tccgtaatttaaaaatgaaaagtgaaccctcccatccattcccttcataaacc 8502854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 120
Target Start/End: Complemental strand, 14681579 - 14681488
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||| ||||||||||||| ||||||| |||||| |||| |||||||||||| ||||| | |||| || | ||| |||||||| |||||||    
T  14681579 aatcacatttaatttattttaaaaaaacatgttatataatctgtaatttaaaaaagaaaatttaaccatcacttcc-ttcccctcctaaaccc 14681488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 17667968 - 17668055
Alignment:
Q  157 tttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    |||||||| ||||||||  |||| | ||||||  || ||||||||| || ||||||| ||||||||||||||||||||| || |||||    
T  17667968 tttggaggggaggggaatggaagactttggagatttagaaatatagtggtaaatggtcaaatctttcacattttttgaaagagtaatt 17668055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 40815416 - 40815318
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||| || ||||||||||  ||||||||| ||||||| |||||| | || |||||||||||| |||||||||| |||| | ||| |||||||| ||||    
T  40815416 ataatatttcaatcacacttt-tttattttataaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaa 40815318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 16938655 - 16938705
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||  |||||||||||||||||||| ||| |||||||    
T  16938655 gtaatttaaaaatgaaatctaaaccctcccctccattcctctcctaaaccc 16938705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 2550420 - 2550387
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||||||||||||||||||||||||||    
T  2550420 gtaatttaaaaatgaaaagtaaaccctcccctcc 2550387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 7544309 - 7544362
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||||  |||||||||||| | |||||||| |||||||    
T  7544309 tccgtaatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaaccc 7544362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 20513573 - 20513614
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgt 59  Q
    ||||||||| ||||||||||||||||||||| ||||||||||    
T  20513573 ataatacttcaatcacacttaatttattttataaaaacacgt 20513614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 22023541 - 22023578
Alignment:
Q  66 atccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||| |||||||||||||||||||||||||    
T  22023541 atccgtaatttataaatgaaaagtaaaccctcccctcc 22023578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 34980987 - 34981036
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||| |||||||||  |||||||||| ||||||||||||||||    
T  34980987 taatttaaaaaagaaaagtaagtcctcccctcccttcccctcttaaaccc 34981036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 2561322 - 2561270
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||| || ||||||||| | ||||||||||| ||||||||||||||||||    
T  2561322 ttggaggattcgaaatatagagaaaaatggtaaattctttcacattttttgaa 2561270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 29002273 - 29002241
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||||||||||||||||||||||||    
T  29002273 taatttaaaaatgaaaagtaaaccctcccctcc 29002241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 10476203 - 10476254
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||| | |||||||| ||||||||| |||||||| |||||||    
T  10476203 cgtaatttaaaaattataagtaaacactcccctcccttcccctcctaaaccc 10476254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 37607014 - 37606940
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||| |||||||  |||||||||||| |||||||  ||||| | ||| ||||||||||| |||||||||||    
T  37607014 ataatacttcaatcacatataatttattttaaaaaaaca-tttatatagtccttaatttaaaaacgaaaagtaaac 37606940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 7398648 - 7398702
Alignment:
Q  190 gttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    |||||||||||||| |||||||||||||   ||||||||||||| | ||||||||    
T  7398648 gttggaaatataggagaaaatggtaaaaaaattcacattttttgtaagactaatt 7398702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 34980879 - 34980829
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacc 119  Q
    |||||||||||||| |||||| |||||| |||||| |||||||| ||||||    
T  34980879 cgtaatttaaaaattaaaagtgaacccttccctcccttcccctcctaaacc 34980829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 36392274 - 36392375
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||| |||||||| |||| |  ||||| | ||||||||||||||| ||||  ||||| | || |||  |||||||| ||||    
T  36392274 ataatacttcaatcacacttaatctattttag-aaaatatattatatagtccgtaatttaaaaacgaaatataaacacaccgctctcttcccctcctaaa 36392372  T
Q  118 ccc 120  Q
    |||    
T  36392373 ccc 36392375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 39966076 - 39966150
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||| || ||||||  ||||||||||| | ||||| | |||||| |||||||||||||||||| |||| ||||    
T  39966076 ataataattcaatcacgtttaatttatttaaaaaaaatatgttatataatccgtaatttaaaaataaaaaataaa 39966150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 43481 - 43396
Alignment:
Q  34 acttaatttattttagaaaaa-cacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    ||||||||||||||| ||||| || |||||| ||||| ||||||||||| || ||||||| ||||  |||| |||| ||| |||||    
T  43481 acttaatttattttaaaaaaaacatgttatataatccctaatttaaaaaagagaagtaaatcctcatctcccttcctctcataaac 43396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 11437010 - 11436957
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| | ||||||| |||||| |||| |||||||| |||||||    
T  11437010 tccgtaatttaaaaaaggaaagtaagccctcctctcccttcccctcctaaaccc 11436957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 13298386 - 13298313
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaa 91  Q
    ||||||||||||||||||||||||||| ||  ||||||   |||||   |||| |||||||||| |||||||||    
T  13298386 ataatacttaaatcacacttaatttatattgcaaaaacgttttatattgtccgcaatttaaaaaagaaaagtaa 13298313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 17024348 - 17024393
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttata 63  Q
    ||||||||| ||||  ||||||||||||||||||||||| ||||||    
T  17024348 ataatacttcaatcgtacttaatttattttagaaaaacatgttata 17024393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 26415069 - 26415109
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccc 110  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  26415069 gtaacttaaaaatgaaaagtaaactctcccctcctttcccc 26415109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 33744260 - 33744228
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||| |||||||||||||||||||||    
T  33744260 taatttaaaaaagaaaagtaaaccctcccctcc 33744228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 35042417 - 35042373
Alignment:
Q  191 ttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||| |||| ||| |||||||||||||||||||| ||||||||||    
T  35042417 ttgggaatacaggagaaaatggtaaaatctttcatattttttgaa 35042373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 35704833 - 35704781
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||| ||||||||||||||||  ||||| |  |||||||||||||||||||||    
T  35704833 ttggggggttggaaatataggaaaaaatagagaaatctttcacattttttgaa 35704781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 37779223 - 37779150
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||||| |||||||  |||||||||||| |||||||  | ||||  ||| ||||||||||| |||||||||||    
T  37779223 ataatacttcaatcacatataatttattttaaaaaaacatttaatag--tccttaatttaaaaacgaaaagtaaac 37779150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 43496721 - 43496805
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||| ||||||||||| ||||||| |||| ||  |||| || | |||||||| |||| |||| |  ||||||||||||||||||    
T  43496721 gtttgcgagtttggaggggaggggatgagagggttttgggggttgggaaatatggggggaaatagagaaatctttcacatttttt 43496805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 27735865 - 27735763
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||| | ||||||||||||||||||||| ||||||||| | ||| |||||||| ||||    
T  27735865 ataatacttcaatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaatgaaaattaaaccctctcttcccttcccctcctaaa 27735766  T
Q  118 ccc 120  Q
    |||    
T  27735765 ccc 27735763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 54935186 - 54935085
Alignment:
Q  20 aatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccct-cccctccattcccctcttaaac 118  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| | | ||||||||||||| |||||||||||||| ||||||| |||||||| |||||    
T  54935186 aatacttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaac 54935087  T
Q  119 cc 120  Q
    ||    
T  54935086 cc 54935085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 31348445 - 31348545
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    |||||| || |||||||| |||||||||||||||||||| |||||| | ||||| ||||||||| ||||||||||||||||||||| |||||||| ||||    
T  31348445 ataataattcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 31348544  T
Q  118 c 118  Q
    |    
T  31348545 c 31348545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 26167057 - 26166935
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| | || |||||||||||| |||||  |||| |||||||||||||||||| ||||    
T  26167057 ataatacttcaatcacacttaatttattttagagaaacatgttatatagtctgtaatttaaaaaagaaaaacaaactctcccctccattcccctcctaaa 26166958  T
Q  118 cccataatcaaaaacacaccctaa 141  Q
    |||  ||||  |||||||||||||    
T  26166957 ccctcaatc-caaacacaccctaa 26166935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 46007825 - 46007927
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||| |||||||||||||||| ||||||| |||||| | || | |||||||||| ||||||||||||||||||||| |||||||| ||||    
T  46007825 ataatacttcaatctcacttaatttattttacaaaaacaagttatatagtctgcaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaa 46007924  T
Q  118 ccc 120  Q
    |||    
T  46007925 ccc 46007927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 109
Target Start/End: Complemental strand, 37711263 - 37711172
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattccc 109  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| | ||||||||||||||| |||||  |||||||||||||| |||||    
T  37711263 ataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaagaaaaacaaaccctcccctcccttccc 37711172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 45742010 - 45741888
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||| | |||||||||||||||  ||||||||| |||| | | |||||||||| ||||    
T  45742010 ataatacttcaatcacatttaatttattttagaaaaacaagttatatagtccgtaatttaaaaaacaaaagtaaatcctcacattcattcccctcctaaa 45741911  T
Q  118 cccataatcaaaaacacaccctaa 141  Q
    |||  ||||  |||||||||||||    
T  45741910 ccctcaatc-caaacacaccctaa 45741888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 1968483 - 1968585
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||| | ||||||||||||||||||  ||||| | ||||||||||||||||||||| ||||| || |||||| |||||||| ||||    
T  1968483 ataatacttcaatcacacctgatttattttagaaaaacatattatatagtccgtaatttaaaaatgaaaattaaactcttccctcccttcccctcctaaa 1968582  T
Q  118 ccc 120  Q
    |||    
T  1968583 ccc 1968585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 47433832 - 47433934
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttat-agaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaa 116  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||| | | || |||||||||||| |||||||||||||||| |||| |||||||| |||    
T  47433832 ataatacttcaatcacacttaatttattttaaaaaaacatgttattatagtctgtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaa 47433931  T
Q  117 acc 119  Q
    |||    
T  47433932 acc 47433934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 150 - 232
Target Start/End: Complemental strand, 9021188 - 9021106
Alignment:
Q  150 ttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    |||| |||||||||  ||| ||||| |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9021188 ttggaagtttggagcggagaggaagggaagactttgaagggttggaaatataggggaaaatggtaaaatctttcacatttttt 9021106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 15451162 - 15451258
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    |||||| |||||||||| |||| ||||  ||||  |||||||||| ||||||||| | |||||||||||||||||||||||||||||| || |||||    
T  15451162 gtttggaagtttggaggggaggagaaggaaaggttttggagggttagaaatatagtgaaaaatggtaaaatctttcacattttttgaaagagtaatt 15451258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 35248806 - 35248738
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaa 86  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||||| ||||    
T  35248806 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaa 35248738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 49735603 - 49735693
Alignment:
Q  29 atcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||| |||||||||||||||||| |||||| | |||||| |||||||| ||||| |||| |||||||||| |||||||| |||||||    
T  49735603 atcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaa-cctcccctcccttcccctcctaaaccc 49735693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 6891480 - 6891378
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| |||  ||| |||||||| ||||| |||||  |||||||  |||||||  ||||    
T  6891480 ataatacttcaatcacacttaatttattttagaaaaacatgttatataatttgtattttaaaaaagaaaaataaactatcccctctcttccccttctaaa 6891381  T
Q  118 ccc 120  Q
    |||    
T  6891380 ccc 6891378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 119
Target Start/End: Original strand, 6938419 - 6938472
Alignment:
Q  66 atccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacc 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  6938419 atccgtaatttaaaaatgaaaagtgaaccctcccctccattcccctcataaacc 6938472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 5730954 - 5731057
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaattt-aaaaatgaaaagtaaaccctcccctccattcccctcttaa 116  Q
    ||||||||| ||| ||||||||||||||||||| ||||| |||||| | |||||||||| ||||| | |||  |||| ||||||||| |||||||| |||    
T  5730954 ataatacttcaattacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaaagtaaaacaaactctcccctcccttcccctcctaa 5731053  T
Q  117 accc 120  Q
    ||||    
T  5731054 accc 5731057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 54320554 - 54320453
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||  ||||||||||||||||||||||||||||| | |||| | || |||||||||||| |||||  ||||||| |||||| || ||||| ||||    
T  54320554 ataatactccaatcacacttaatttattttagaaaaacatgatatatagtcggtaatttaaaaaagaaaatcaaaccct-ccctccctttccctcctaaa 54320456  T
Q  118 ccc 120  Q
    |||    
T  54320455 ccc 54320453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 24662607 - 24662668
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| |||| || |||||    
T  24662607 ttggagggttggaaatatataggaaaatggtaaaatctttcacattttctgaaagagtaatt 24662668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 42759515 - 42759564
Alignment:
Q  186 gagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  42759515 gagggttggaaatatatgggaaaattgtaaaatctttcacattttttgaa 42759564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 49735539 - 49735486
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||| |||||||    
T  49735539 tccgtaatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccc 49735486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 54935242 - 54935295
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  54935242 tccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccc 54935295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 31348392 - 31348341
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| |||||    
T  31348392 tccgtaatttaaaaatgaaaagtaaacccttccctcccttcccctcataaac 31348341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 235
Target Start/End: Original strand, 34236363 - 34236449
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||| |||||||||| ||||||||||| |||| | ||||| ||||| ||||||| || ||||||  ||||||||||||||||||||||    
T  34236363 gtttaggagtttggaagagaggggaagggaagactttggatggttgaaaatata-ggaaaaatgacaaaatctttcacattttttgaa 34236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 36151696 - 36151637
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaattta 77  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| | || ||||||||    
T  36151696 ataatacttcaatcacacttaatttattttagaaaaacatgttatatagtctgtaattta 36151637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 229
Target Start/End: Original strand, 15498622 - 15498703
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattt 229  Q
    ||||||||||||||||| |||| |||   ||||  ||| |||||| ||||||||| | ||||||||||||||||||||||||    
T  15498622 gtttgggagtttggaggggaggagaatgaaaggttttgaagggttagaaatatagagaaaaatggtaaaatctttcacattt 15498703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 37711296 - 37711349
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||| |||||||    
T  37711296 tccgtaatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccc 37711349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 37969568 - 37969651
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    |||||| |||||||||| |||||||||  ||| | || |||||||| ||||||| ||||||||| |||| |||||||||||||||    
T  37969568 gtttggaagtttggaggggaggggaaggaaagactttagagggttgaaaatatatgggaaaatgataaa-tctttcacatttttt 37969651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 56118103 - 56118048
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacga 238  Q
    ||||||||||| ||||||| ||||||| |||||||||||||| ||||||| |||||    
T  56118103 ttggagggttgaaaatataagggaaaacggtaaaatctttcatatttttttaacga 56118048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 2247927 - 2248027
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||| || ||| ||||||||||||| |||||| | || |||||||||||| ||||||||||| ||||| ||  ||| |||| ||||    
T  2247927 ataatacttcaatcacacatatttt-ttttagaaaaacatgttatata-tctgtaatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaa 2248024  T
Q  118 ccc 120  Q
    |||    
T  2248025 ccc 2248027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 100
Target Start/End: Complemental strand, 24565418 - 24565384
Alignment:
Q  66 atccgtaatttaaaaatgaaaagtaaaccctcccc 100  Q
    |||||||||||||||||||||||||||||||||||    
T  24565418 atccgtaatttaaaaatgaaaagtaaaccctcccc 24565384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 28332924 - 28332850
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaa 92  Q
    ||||||||| ||||| |||||||||| |||||||||||  |||||| | |  |||||||||||| ||||||||||    
T  28332924 ataatacttcaatcatacttaatttactttagaaaaacctgttatatagtatgtaatttaaaaaagaaaagtaaa 28332850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 38994105 - 38994059
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattt 229  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||||    
T  38994105 ttggaggattgagaatataggggaaaatggtaaaatctttcacattt 38994059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 44784112 - 44784038
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaa 92  Q
    ||||||||| |||||||||||||||| |||||||||||  ||||||   |  |||||||||||| ||||||||||    
T  44784112 ataatacttcaatcacacttaatttactttagaaaaacctgttatatggtatgtaatttaaaaaagaaaagtaaa 44784038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 54320607 - 54320680
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacccataatcaaaaacacaccctaa 141  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |||||||  ||||  |||||||||||||    
T  54320607 tccgtaatttaaaaattaaaatcaaaccctcccctcccttcccctcctaaaccctcaatc-caaacacaccctaa 54320680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 21694961 - 21694908
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| ||||||||| ||||||| ||| |||||||| |||||||    
T  21694961 tccgtaatttaaaaaagaaaagtaagccctcccgtcccttcccctcctaaaccc 21694908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 24682861 - 24682906
Alignment:
Q  187 agggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||    
T  24682861 agggttggaaatataagggaaaatagtaaaatctttcatatttttt 24682906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 45742063 - 45742116
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||||||| ||||||||| || ||| | |||||||    
T  45742063 tccgtaatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaaccc 45742116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 46007767 - 46007734
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||||||||||||||||||||||||||    
T  46007767 gtaatttaaaaatgaaaagtaaaccctcccctcc 46007734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 52554823 - 52554907
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||| ||||||||||| ||||||||| ||| |  |||||||||| |||||| | |||||||| ||||||| |  ||||||||||    
T  52554823 gtttgagagtttggaggggaggggaagggaaagttttggagggttagaaataaaagggaaaattgtaaaatttgccacatttttt 52554907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 54723699 - 54723743
Alignment:
Q  187 agggttggaaatataggggaaaatggtaaaatctttcacattttt 231  Q
    ||||||||||||||| |||||||| ||||||||||||||| ||||    
T  54723699 agggttggaaatataagggaaaattgtaaaatctttcacaatttt 54723743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 1968418 - 1968363
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacccataatc 126  Q
    |||||||| | |||||||||||||||||||||| || |||||| |||||| |||||    
T  1968418 taatttaatattgaaaagtaaaccctcccctccctttccctctcaaacccttaatc 1968363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 2917087 - 2917150
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaa 81  Q
    ||||||||| ||||||| | |||||||||||||||| || |||||| | |||| ||||||||||    
T  2917087 ataatacttcaatcacaataaatttattttagaaaatcatgttatatagtccggaatttaaaaa 2917150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 24565491 - 24565570
Alignment:
Q  41 ttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||| |||||||||| |||||| |  |||||||||||||| |||| |||||  || |||||| |||||||| |||||||    
T  24565491 ttattatagaaaaacatgttatatagcccgtaatttaaaaaagaaatgtaaattcttccctcccttcccctcctaaaccc 24565570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 232
Target Start/End: Original strand, 27485140 - 27485171
Alignment:
Q  201 aggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||||||||||||||||||||||||||||||    
T  27485140 aggggaaaatggtaaaatctttcacatttttt 27485171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 47846179 - 47846282
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaa-cacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaa 116  Q
    ||||||||| ||  ||||||||||||||||| ||||| ||| ||| |   | | |||||||||||  |||||||||||||||| ||| ||| ||||||||    
T  47846179 ataatacttcaaaaacacttaatttattttaaaaaaaacactttacattgttcataatttaaaaaataaaagtaaaccctcccatcccttctcctcttaa 47846278  T
Q  117 accc 120  Q
    ||||    
T  47846279 accc 47846282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 16400920 - 16400818
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||| | ||||||||||||||||||||| ||| || | |  ||| | ||||||  |||||| || |||||||||| ||| |||| ||||    
T  16400920 ataatacttcaatcataattaatttattttagaaaaacatgttgtatagtttgtagtataaaaaataaaagtgaatcctcccctcccttctcctcctaaa 16400821  T
Q  118 ccc 120  Q
    |||    
T  16400820 ccc 16400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 205
Target Start/End: Complemental strand, 26571379 - 26571321
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttgga-gggttggaaatatagggg 205  Q
    ||||||||||||||||| |||||||||||||| | || || ||||| ||||||||||||    
T  26571379 gtttgggagtttggaggggaggggaagagaagactttagaggggtttgaaatatagggg 26571321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 120
Target Start/End: Original strand, 27735901 - 27735971
Alignment:
Q  50 aaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||  ||||||  ||||||||||||||||||||| | ||||||  ||||| |||||||| |||||||    
T  27735901 aaaaacattttatagtgtccgtaatttaaaaatgaaaaatgaaccctatcctcccttcccctcctaaaccc 27735971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 32189920 - 32189858
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaat 210  Q
    ||||||||||||||||||||||| |||  ||||| |||||| |   |||||||||||||||||    
T  32189920 gtttgggagtttggaggagagggaaaggaaaggctttggagagagagaaatataggggaaaat 32189858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Original strand, 34110979 - 34111013
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||||| ||||||||||||||||||||    
T  34110979 cgtaatttaaaaataaaaagtaaaccctcccctcc 34111013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 17622288 - 17622385
Alignment:
Q  138 ctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||| || ||||||||||||||||| || |||| | || ||| |||| ||||||||||||||  | |||||||  |||   |||||||||||||||    
T  17622288 ctaaggttttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaa 17622385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 17938174 - 17938125
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||| ||||| ||||| || ||||||||||||||| |||||||    
T  17938174 taatttaaaaacgaaaattaaactcttccctccattcccctcctaaaccc 17938125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 29993946 - 29994003
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacccataatc 126  Q
    |||||||||||||  |||||| |||||||||||||||| ||||| |||| || |||||    
T  29993946 cgtaatttaaaaagtaaaagtgaaccctcccctccatttccctcctaaatccttaatc 29994003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 35248863 - 35248912
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||| |||||||||||||||||||||| | || ||| |||||||    
T  35248863 taatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccc 35248912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 41174526 - 41174571
Alignment:
Q  75 ttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||| |||||| |||||||| |||||||| |||||||    
T  41174526 ttaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccc 41174571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 41495500 - 41495561
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    ||||||||||  |||||||| | ||||||||||||||||| | ||||||| ||||| |||||    
T  41495500 ttggagggttaaaaatatagagaaaaatggtaaaatcttttatattttttaaacgagtaatt 41495561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 52430417 - 52430458
Alignment:
Q  194 gaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||||||||||| | |||||||||||||| |||||||    
T  52430417 gaaatataggggaaaattgaaaaatctttcacatcttttgaa 52430458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 54576398 - 54576345
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||| |||||| ||||||||| ||||||||||| |||||||  |||||||    
T  54576398 tccgtaatctaaaaaagaaaagtaagccctcccctcccttccccttctaaaccc 54576345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 142
Target Start/End: Original strand, 54576504 - 54576576
Alignment:
Q  69 cgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacccataatcaaaaacacaccctaag 142  Q
    |||||||||||||| |||||| ||| || | |||| |||| ||||||||||| |||||  ||||||||||||||    
T  54576504 cgtaatttaaaaattaaaagtgaactcttctctcccttcctctcttaaacccttaatc-caaacacaccctaag 54576576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 29798404 - 29798307
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||||| |||||    ||||||||| |||||| | || ||||||||||||  ||||||||||  ||| |||  |||||||| ||||    
T  29798404 ataatacttcaatcacacttgattta----agaaaaacatgttatatagtctgtaatttaaaaaataaaagtaaactatcctctctcttcccctcctaaa 29798309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 222
Target Start/End: Complemental strand, 35959433 - 35959349
Alignment:
Q  138 ctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatcttt 222  Q
    |||||| || ||||||||||||||||| |||||| ||  ||||| |||| |||| | |||||||| || ||||||  ||||||||    
T  35959433 ctaaggctttgtttgggagtttggaggggaggggtaggaaaggctttggggggtggaaaatatagagggaaatggagaaatcttt 35959349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 41174465 - 41174397
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaa 86  Q
    ||||||| | ||||||| || |||||||||||||||||| | |||| | ||| ||||||||||| ||||    
T  41174465 ataatacatcaatcacatttgatttattttagaaaaacatgctatatagtccctaatttaaaaaagaaa 41174397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 42650897 - 42650801
Alignment:
Q  139 taaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||| || ||||| ||||||||||| || ||||||  | ||| |||| ||||  ||||||||||| ||||| |  |||||||||||| ||||||||    
T  42650897 taaggctttgtttgtgagtttggaggggaagggaaggaagggctttggggggtgagaaatatagggaaaaattgataaatctttcacaatttttgaa 42650801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 31849230 - 31849128
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| |||||||||| |||||||||||||||| | |||||| | || ||| |||||||| ||||| ||||||||||||||| |||||||||||||    
T  31849230 ataatacttcaatcacacttgatttattttagaaaaatatgttatatagtctgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcttaaa 31849131  T
Q  118 ccc 120  Q
    |||    
T  31849130 ccc 31849128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 16738120 - 16738221
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||||||| ||||||| |||||||||||||||||  ||||| |||| |||||||||||| ||||||||||| ||||||||| ||||| || ||||    
T  16738120 ataatacttaaataacacttactttattttagaaaaacattttatataatctgtaatttaaaaaagaaaagtaaactctcccctcc-ttcccatcctaaa 16738218  T
Q  118 ccc 120  Q
    |||    
T  16738219 ccc 16738221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 19278165 - 19278261
Alignment:
Q  21 atacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    |||||| ||||| ||| ||||||||||||||||||| |||||| | ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  19278165 atacttcaatcagactaaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaa-taaaccctcccctcccttcccctcctaaac 19278261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 148 - 232
Target Start/End: Complemental strand, 24379858 - 24379774
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||||||||||||||| ||| |||||||||| | ||||||||||| |||||||||| ||||| ||||||||||||| |||||||    
T  24379858 gtttgggagtttggaggtgagaggaagagaagactttggagggttgaaaatatagggaaaaatagtaaaatctttcatatttttt 24379774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 4097636 - 4097739
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacac-gttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaa 116  Q
    ||||||||| |||||||||||||||||||| |||||| |  ||||||   ||||||||||||||| ||||||| |||||| |||||| ||||||||||||    
T  4097636 ataatacttcaatcacacttaatttattttggaaaaaaaatgttatattgtccgtaatttaaaaaagaaaagtgaacccttccctcccttcccctcttaa 4097735  T
Q  117 accc 120  Q
    ||||    
T  4097736 accc 4097739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 232
Target Start/End: Original strand, 33938949 - 33939033
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    ||||| |||||| ||| |||||||||||||| |  ||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  33938949 gtttgagagtttagagaagaggggaagagaaagttttggagggttgaaaatataagggaaaatgataaaatctttcacatttttt 33939033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 14515591 - 14515491
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| | ||||||||||||||||||||| |||||  ||||  | ||||||||||||||| |||||  |||||||||||||| |||||||| ||||    
T  14515591 ataatacttcattcacacttaatttattttagagaaaca--ttatctagtccgtaatttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaa 14515494  T
Q  118 ccc 120  Q
    |||    
T  14515493 ccc 14515491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 33041591 - 33041488
Alignment:
Q  17 aataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaa 116  Q
    ||||| |||| ||||||||||||||||||||| |||||||| ||||| | ||  ||||||||||||||||| ||||  ||||||||| |||| ||| |||    
T  33041591 aataacacttcaatcacacttaatttattttaaaaaaacacattatatagtctataatttaaaaatgaaaaataaattctcccctcctttcctctcctaa 33041492  T
Q  117 accc 120  Q
    ||||    
T  33041491 accc 33041488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 2893750 - 2893670
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcc 98  Q
    ||||||| | ||||||||||||||||||||||||||||| |||||| | || ||| |||||||| ||||||||||| ||||    
T  2893750 ataatacatcaatcacacttaatttattttagaaaaacatgttatatagtctgtagtttaaaaacgaaaagtaaactctcc 2893670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 142
Target Start/End: Original strand, 12811108 - 12811227
Alignment:
Q  22 tacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccca 121  Q
    ||||| |||||||||||||||||||||||||||||  ||||| | ||  ||||||||| | ||||||||| ||||||||||  ||||| || |||||||     
T  12811108 tacttcaatcacacttaatttattttagaaaaacatattatatagtctctaatttaaagaagaaaagtaatccctcccctctcttcccatcctaaaccct 12811207  T
Q  122 taatcaaaaacacaccctaag 142  Q
     ||||  ||||||||||||||    
T  12811208 caatc-caaacacaccctaag 12811227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 16329634 - 16329539
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaacgactaatt 244  Q
    |||||| ||||| |||||||| |||||| ||| | ||| ||||||||||||||||| ||||||| |||||||||| |||||||||||| || |||||    
T  16329634 gtttggcagtttagaggagagaggaaga-aagactttgaagggttggaaatataggagaaaatgataaaatcttttacattttttgaaagaataatt 16329539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 33236071 - 33235996
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||| ||| |||||  |||||||||||||||||||||| |||||| | ||||||||||||||| |||||||||||    
T  33236071 ataattcttcaatcagtcttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaac 33235996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 34556998 - 34557077
Alignment:
Q  148 gtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacat 227  Q
    |||||||| |||||||| |||| || | |||| | |||||| |||||||||||||| |||||||||||||||||||||||    
T  34556998 gtttgggattttggaggggaggagatgggaagactttggagagttggaaatataggagaaaatggtaaaatctttcacat 34557077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 1300740 - 1300654
Alignment:
Q  18 ataatacttaaatcacacttaatttatttt-agaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||| ||||||||||||||||| || | ||||| | |||||| |||||||||||||||||   |||||||||||||||||||    
T  1300740 ataatacttcaatcacacttaatttatcttgaaaaaaatatgttatataatccgtaatttaaaaacataaagtaaaccctcccctcc 1300654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 97
Target Start/End: Original strand, 6034201 - 6034275
Alignment:
Q  23 acttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctc 97  Q
    |||| ||||||||||||||||||||||||||||| |||||| | || | |||||||||| |||||||||| ||||    
T  6034201 acttcaatcacacttaatttattttagaaaaacatgttatacagtctgcaatttaaaaaagaaaagtaaatcctc 6034275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 13583839 - 13583777
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaa 80  Q
    |||||| || ||||||||||||||||||||||||||||| |||||| |||| |||||||||||    
T  13583839 ataatatttcaatcacacttaatttattttagaaaaacatgttatataatctgtaatttaaaa 13583777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 2892727 - 2892812
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||| || ||||||||| ||||||||||||||||||  |||||| | |||||| |||||||| ||||||||||  |||||||||    
T  2892727 ataatatttcaatcacactaaatttattttagaaaaacgtgttatatagtccgtagtttaaaaaagaaaagtaaattctcccctcc 2892812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 1300793 - 1300833
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattc 107  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1300793 tccgtaatttaaaaatgaaaagtaaaccctcccctccattc 1300833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 9721209 - 9721157
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaacc 119  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| ||||||    
T  9721209 tccgtaatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaacc 9721157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 10818389 - 10818440
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  10818389 tccgtaatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaac 10818440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 5585436 - 5585486
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaa 78  Q
    ||||||||||||||||||||||||||||| |||||| | ||||||||||||    
T  5585436 aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaa 5585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 34176455 - 34176397
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaattt 76  Q
    ||||||||  |||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  34176455 ataatactgcaatcacacttgatttattttagaaaaacatgttatataatccgtaattt 34176397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 9719102 - 9719049
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||| |||| |||||||||| |||||||| |||||||    
T  9719102 tccgtaatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccc 9719049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 103
Target Start/End: Complemental strand, 21606915 - 21606879
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||||||||||||||||||||||||||||    
T  21606915 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 21606879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 1390495 - 1390545
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||| || | |||||||||||||| |||||||    
T  1390495 gtaatttaaaaatgaaaagtaaaacccctcctccattcccctcctaaaccc 1390545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 30487373 - 30487324
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||| |||||||||| ||||||||||||| |||||||| |||||||    
T  30487373 taatttaacaatgaaaagtgaaccctcccctcccttcccctcctaaaccc 30487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 9298659 - 9298695
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    |||||||||||||| ||||||||||||||||||||||    
T  9298659 tccgtaatttaaaattgaaaagtaaaccctcccctcc 9298695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 31849283 - 31849319
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctcc 103  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31849283 tccgtaatttaaaaatgaaaagtgaaccctcccctcc 31849319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 1390444 - 1390365
Alignment:
Q  14 atcaataatacttaaatcacacttaatttattttagaa-aaacacgttatagaatccgtaatttaaaaatgaaaagtaaa 92  Q
    |||||||||| || ||||| |||||||||||||||||| ||||| |||| | | |||||||||| |||| ||||| ||||    
T  1390444 atcaataatatttcaatcaaacttaatttattttagaataaacatgttacatagtccgtaattttaaaaagaaaattaaa 1390365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 229
Target Start/End: Complemental strand, 13380721 - 13380662
Alignment:
Q  170 ggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatctttcacattt 229  Q
    ||||| |||| | |||||||||||||||||||  |||||||| |||||||||||| ||||    
T  13380721 ggaagggaagactttggagggttggaaatatatcggaaaatgataaaatctttcagattt 13380662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 23091130 - 23091185
Alignment:
Q  66 atccgtaatttaaaaat-gaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||  ||||||||| ||||||||||| |||||||| |||||||    
T  23091130 atccgtaatttaaaaaaagaaaagtaagccctcccctcccttcccctcctaaaccc 23091185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 33236123 - 33236174
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    ||||||||||||||||||||||||| | ||||||||| |||| ||| |||||    
T  33236123 tccgtaatttaaaaatgaaaagtaatctctcccctcctttcctctcataaac 33236174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 120
Target Start/End: Complemental strand, 19278102 - 19278052
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||||||| ||| ||| | |||||||| |||||||    
T  19278102 gtaatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccc 19278052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 665907 - 665858
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||| | ||||||||||||  |||||||| |||||||    
T  665907 taatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccc 665858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 10818300 - 10818247
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||| ||||| |||||  |||||||| |||||||| |||||||    
T  10818300 tccgtaatttaaaaaagaaaaataaacaatcccctcccttcccctcctaaaccc 10818247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 2523611 - 2523559
Alignment:
Q  183 ttggagggttggaaatataggggaaaatggtaaaatctttcacattttttgaa 235  Q
    ||||||||||  ||||||| |||||||| | ||||||||||||| ||||||||    
T  2523611 ttggagggttttaaatataagggaaaattgaaaaatctttcacactttttgaa 2523559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 16361758 - 16361714
Alignment:
Q  188 gggttggaaatataggggaaaatggtaaaatctttcacatttttt 232  Q
    |||||||||||||| | ||||||| |||||||||| |||||||||    
T  16361758 gggttggaaatatatgagaaaatgataaaatcttttacatttttt 16361714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 24735148 - 24735049
Alignment:
Q  138 ctaaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatgg--taaaatctttcacattttttgaa 235  Q
    |||||| || ||||||||||||||||| ||||||| | || ||  |||| ||||||||||||||  | |||||||   ||||  ||||||||||||||||    
T  24735148 ctaaggttttgtttgggagtttggaggggaggggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattttcacattttttgaa 24735049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 120
Target Start/End: Original strand, 39324 - 39416
Alignment:
Q  28 aatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||||||||| |||| | | ||||||||||||||| ||||||||||||||||||||| || ||||  |||||||    
T  39324 aatcacacttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaaccctcccctccctttcccttctaaaccc 39416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 120
Target Start/End: Complemental strand, 39258 - 39204
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccct-cccctccattcccctcttaaaccc 120  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||| |||||||    
T  39258 tccgtaatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaaccc 39204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 6704 - 6605
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaa 117  Q
    ||||||||| ||||||||| |||||||||||||| |||| |||||| | || |||||||||||| ||||||||||||||||||||| ||| |||| ||||    
T  6704 ataatacttcaatcacactaaatttattttagaataacaagttatatagtctgtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaa 6605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 16420 - 16503
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccct 101  Q
    ||||||||| ||||||||||||||||||||||| ||||| |||||| | ||||| | ||||||| |||||||||||||||||||    
T  16420 ataatacttcaatcacacttaatttattttagacaaacatgttatatagtccgtgagttaaaaacgaaaagtaaaccctcccct 16503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 16363 - 16314
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||||||||||||||||||||||||||| || ||||| |||||||    
T  16363 taatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccc 16314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 219
Target Start/End: Complemental strand, 5394 - 5314
Alignment:
Q  139 taaggattcgtttgggagtttggaggagaggggaagagaaggcgttggagggttggaaatataggggaaaatggtaaaatc 219  Q
    ||||| || ||||||||||||  ||||||| ||||| |||||| || |||||||| ||||||||| |||||||||||||||    
T  5394 taaggctttgtttgggagtttataggagagaggaagggaaggctttagagggttgaaaatataggagaaaatggtaaaatc 5314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 15383 - 15320
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaa 81  Q
    ||||||||| || |||||||||||||||||||||||||| |||||  |||||||| ||||||||    
T  15383 ataatacttcaaccacacttaatttattttagaaaaacatgttatgtaatccgtagtttaaaaa 15320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 16068 - 15995
Alignment:
Q  20 aatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaac 93  Q
    ||||||| |||||||| |||||| ||||| ||||||| |||||| | || |||||||||||| |||||||||||    
T  16068 aatacttcaatcacacataattttttttaaaaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaac 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 1267 - 1190
Alignment:
Q  43 attttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaaccc 120  Q
    ||||||||| |||| |||| | | ||||||||||||||| ||||||||||| ||||||||  |||||||| |||||||    
T  1267 attttagaataacatgttacatagtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccc 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 1349 - 1383
Alignment:
Q  71 taatttaaaaatgaaaagtaaaccctcccctccat 105  Q
    |||||||||||||||||||||||| ||||||||||    
T  1349 taatttaaaaatgaaaagtaaaccttcccctccat 1383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 242389 - 242433
Alignment:
Q  67 tccgtaatttaaaaatgaaaagtaaaccctcccctccattcccct 111  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||    
T  242389 tccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccct 242433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 3215 - 3167
Alignment:
Q  70 gtaatttaaaaatgaaaagtaaaccctcccctccattcccctcttaaac 118  Q
    |||||||||||| ||||||||||| ||||||||| |||||||| |||||    
T  3215 gtaatttaaaaaagaaaagtaaactctcccctcccttcccctcctaaac 3167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 18890 - 18802
Alignment:
Q  18 ataatacttaaatcacacttaatttattttagaaaaacacgttatagaatccgtaatttaaaaatgaaaagtaaaccctcccctccattc 107  Q
    |||||| || ||| |||| |||||||||||||||| ||| |||||| | || || ||||||||| ||||| |||||||||| ||| ||||    
T  18890 ataataattcaatgacacataatttattttagaaagacatgttatatagtctgtcatttaaaaaagaaaa-taaaccctcctctcaattc 18802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1763 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 484 - 516
Alignment:
Q  203 gggaaaatggtaaaatctttcacattttttgaa 235  Q
    |||||||||||||||| ||||||||||||||||    
T  484 gggaaaatggtaaaatatttcacattttttgaa 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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