View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5337_high_4 (Length: 341)

Name: NF5337_high_4
Description: NF5337
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5337_high_4
NF5337_high_4
[»] chr2 (16 HSPs)
chr2 (27-322)||(31902092-31902387)
chr2 (27-321)||(18681173-18681478)
chr2 (27-119)||(12793612-12793704)
chr2 (208-293)||(29043993-29044078)
chr2 (27-119)||(915334-915426)
chr2 (233-322)||(9926520-9926607)
chr2 (227-322)||(6173897-6173993)
chr2 (262-301)||(13337590-13337629)
chr2 (262-298)||(10173284-10173320)
chr2 (265-301)||(22884816-22884852)
chr2 (262-298)||(37770355-37770391)
chr2 (262-301)||(4975085-4975124)
chr2 (262-301)||(4992993-4993032)
chr2 (193-283)||(915159-915248)
chr2 (261-301)||(4472282-4472322)
chr2 (265-301)||(27740331-27740367)
[»] chr1 (17 HSPs)
chr1 (27-322)||(4651887-4652188)
chr1 (27-119)||(2988000-2988092)
chr1 (224-320)||(37582405-37582501)
chr1 (233-319)||(2987806-2987892)
chr1 (27-84)||(35250192-35250249)
chr1 (232-326)||(11839527-11839622)
chr1 (260-296)||(32863253-32863289)
chr1 (262-301)||(9313042-9313081)
chr1 (262-301)||(376508-376547)
chr1 (246-301)||(16149100-16149155)
chr1 (252-302)||(29938935-29938986)
chr1 (262-301)||(34775212-34775251)
chr1 (262-301)||(52278622-52278661)
chr1 (260-301)||(50588974-50589016)
chr1 (145-226)||(11839455-11839536)
chr1 (261-301)||(19598989-19599030)
chr1 (262-294)||(27102522-27102554)
[»] chr7 (6 HSPs)
chr7 (27-322)||(38485663-38485966)
chr7 (51-322)||(9349841-9350113)
chr7 (27-184)||(46133091-46133249)
chr7 (262-301)||(3478689-3478728)
chr7 (262-301)||(42532961-42533000)
chr7 (225-297)||(27028465-27028538)
[»] chr3 (13 HSPs)
chr3 (36-319)||(30935060-30935353)
chr3 (182-317)||(1652561-1652696)
chr3 (203-322)||(7966746-7966864)
chr3 (262-301)||(4171084-4171123)
chr3 (249-298)||(32010114-32010163)
chr3 (36-96)||(1652790-1652850)
chr3 (262-294)||(14893270-14893302)
chr3 (218-294)||(38489082-38489160)
chr3 (270-301)||(47946049-47946080)
chr3 (262-301)||(50518791-50518830)
chr3 (233-282)||(22948347-22948397)
chr3 (241-294)||(22948434-22948488)
chr3 (261-298)||(25594213-25594250)
[»] chr8 (6 HSPs)
chr8 (37-322)||(30235796-30236090)
chr8 (27-322)||(35062565-35062860)
chr8 (27-294)||(10552375-10552641)
chr8 (236-321)||(5214988-5215073)
chr8 (42-293)||(32945407-32945662)
chr8 (187-239)||(41791017-41791069)
[»] chr5 (7 HSPs)
chr5 (33-244)||(36979029-36979245)
chr5 (29-321)||(31721787-31722070)
chr5 (218-301)||(31742460-31742543)
chr5 (262-301)||(13953950-13953989)
chr5 (223-314)||(24436129-24436220)
chr5 (262-301)||(26405250-26405289)
chr5 (262-294)||(30097673-30097705)
[»] chr4 (12 HSPs)
chr4 (187-301)||(43373793-43373907)
chr4 (225-297)||(43077270-43077342)
chr4 (27-119)||(43373975-43374067)
chr4 (37-119)||(19432160-19432242)
chr4 (187-322)||(19432304-19432439)
chr4 (262-293)||(28967215-28967246)
chr4 (208-321)||(35800729-35800842)
chr4 (262-300)||(41117671-41117709)
chr4 (159-268)||(24739938-24740047)
chr4 (209-301)||(35336856-35336949)
chr4 (27-96)||(35800597-35800666)
chr4 (261-301)||(39420738-39420778)
[»] chr6 (9 HSPs)
chr6 (187-301)||(9224201-9224312)
chr6 (27-118)||(12794212-12794303)
chr6 (224-301)||(6946871-6946949)
chr6 (225-301)||(26534433-26534508)
chr6 (164-318)||(27774844-27774991)
chr6 (203-301)||(12794398-12794496)
chr6 (30-119)||(26215899-26215989)
chr6 (264-301)||(17278164-17278201)
chr6 (252-301)||(5746966-5747014)


Alignment Details
Target: chr2 (Bit Score: 161; Significance: 8e-86; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 27 - 322
Target Start/End: Complemental strand, 31902387 - 31902092
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttaccatgtgt 126  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| | ||||    
T  31902387 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtgactcagtgttggtgttgaggacttggttctcttttacaaggtgt 31902288  T
Q  127 tcgattagtagtagcgacgagtgttttggatgttg-tctttcggtggttggttagtatagaagtcagttttaggggatgatatttatttttatgggagtt 225  Q
    ||| |||||||| |||||||||||||  ||||| | | ||||  |||||||||||||||| ||||||||||| ||| |||| |||||||| ||  |||||    
T  31902287 tcggttagtagtggcgacgagtgtttcagatgtcgttttttcactggttggttagtataggagtcagttttatgggttgatgtttattttgat-agagtt 31902189  T
Q  226 gtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgtaacac 322  Q
    |||||||| ||||||||||||| ||||| ||| |||||||||  ||||| |||||||  |||||||||| ||| |||||||||||||||||||||||    
T  31902188 gtccttattggtgttgatcgcagggttgccttggttggtgttagttttcgggtgttctacctatatacggcgctttgatttgtactttctgtaacac 31902092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 321
Target Start/End: Original strand, 18681173 - 18681478
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttaccatg-tg 125  Q
    |||||||  ||||| | |||||||||||||||||||||||||| |||||||||||||||   |||||||| |||||||| ||||||||||||| | | ||    
T  18681173 aggttgcacggtggtgaaagctgaatgatctttagagaaggagctcttcggatgtggctcaatgttggtgatgaggactaggttctcttttacaagggtg 18681272  T
Q  126 ttcgatt------agtagtagcgacgagtgttttggatgttgtctttcg----gtggttggttagtatagaagtcagttttaggggatgatatttatttt 215  Q
    |||  ||      ||| || |||||||||||||||||||| || |||      ||||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  18681273 ttcttttgaggtgagtggtggcgacgagtgttttggatgtcgtgttttttttagtggttggtaagtataggagtcagttttagggggtgatgtttatttt 18681372  T
Q  216 tatgggagttgtccttatgggtgttgatcgca-aggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttc 314  Q
       ||| ||||| ||||||||||||||| ||| ||||| |||||||| || ||| ||||| ||||||||||||||||||||| ||||  |||||||||||    
T  18681373 agagggtgttgttcttatgggtgttgattgcagaggtt-tctttgttagtatttgttttcgggtgttccgcctatatacgacaccttagtttgtactttc 18681471  T
Q  315 tgtaaca 321  Q
    |||||||    
T  18681472 tgtaaca 18681478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 12793704 - 12793612
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttac 119  Q
    |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| | |  ||||||||||||    
T  12793704 aggttgtgcggtggtggaagctgaatgatctttagagaaggagttcttcggatgtggctcggtgttggtgatgagaagtaagttctcttttac 12793612  T

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Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 29044078 - 29043993
Alignment:
Q  208 tttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatac 293  Q
    ||||||||  |||| | ||| ||| ||||||||||||||| || ||||||||||||| ||| ||||||||||||||||||||||||    
T  29044078 tttattttggtgggtgatgtacttttgggtgttgatcgcaggggtgtctttgttggtttttgttttcaggtgttccgcctatatac 29043993  T

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Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 915426 - 915334
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttac 119  Q
    |||||||| ||||| ||||||| |||||| || ||| |||||||||||||||||| |||  ||||||||| |||||| | |||||||| ||||    
T  915426 aggttgcgcggtggtggaagctcaatgattttaagaaaaggagttcttcggatgttgctcagtgttggtgatgaggattgggttctctattac 915334  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 322
Target Start/End: Original strand, 9926520 - 9926607
Alignment:
Q  233 tgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgtaacac 322  Q
    ||||||||||| ||| ||| || |||||||||||||||||||  |||||||| |||||||||  ||||| ||||||||||| ||||||||    
T  9926520 tgggtgttgatggcagggt-gtatttgttggtgtttattttcgagtgttccgtctatatacggagcctt-atttgtactttttgtaacac 9926607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 322
Target Start/End: Complemental strand, 6173993 - 6173897
Alignment:
Q  227 tccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttga-tttgtactttctgtaacac 322  Q
    |||||||||||| |||||||| || ||||| | ||||||||| ||||  |||||||| ||||||||||| | ||| | ||||||||||| |||||||    
T  6173993 tccttatgggtgctgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccacctatatacgatgtctttagtttgtactttccgtaacac 6173897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 13337590 - 13337629
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  13337590 ggtgtttattttcaggtgttccacctatatacgacgcctt 13337629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 10173320 - 10173284
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgc 298  Q
    |||||||||||||||||||||||||||||||| ||||    
T  10173320 ggtgtttattttcaggtgttccgcctatatacaacgc 10173284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 22884852 - 22884816
Alignment:
Q  265 gtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22884852 gtttattttcgggtgttccgcctatatacgacgcctt 22884816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 298
Target Start/End: Complemental strand, 37770391 - 37770355
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgc 298  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37770391 ggtgtttattttcgggtgttccgcctatatacgacgc 37770355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 4975085 - 4975124
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  4975085 ggtgtttattttcgggtgttcagcctatatacgacgcctt 4975124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 4992993 - 4993032
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||| ||||||| ||||||||||||||||||    
T  4992993 ggtgtttattttcgggtgttcagcctatatacgacgcctt 4993032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 283
Target Start/End: Complemental strand, 915248 - 915159
Alignment:
Q  193 ttttaggggatgatatttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttcc 283  Q
    |||||||||||||| ||||||||  |  | |||||||||||||||| ||| || | || |||||||||| |||||| ||||| ||||||||    
T  915248 ttttaggggatgatgtttattttggtaagtgttgtccttatgggtggtga-cgtaggggtgtctttgttagtgtttgttttcgggtgttcc 915159  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 4472282 - 4472322
Alignment:
Q  261 tggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  4472282 tggtgtttattttcggatgttccgtctatatacgacgcctt 4472322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 301
Target Start/End: Original strand, 27740331 - 27740367
Alignment:
Q  265 gtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    |||||||||| |||||||| |||||||||||||||||    
T  27740331 gtttattttcgggtgttccacctatatacgacgcctt 27740367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 8e-46; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 27 - 322
Target Start/End: Original strand, 4651887 - 4652188
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttacca-tgtg 125  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||| || ||||||||||||||||||| |  |||    
T  4651887 aggttgcgcggtggtggaagctgaatgatctttagagaaggagttcttcggatgtggctcattgttggtgatggggacttggttctcttttacaagggtg 4651986  T
Q  126 ttc------gattagtagtagcgacgagtgttttggatgttg-tctttcggtggttggttagtatagaagtcagttttaggggatgatatttatttttat 218  Q
    |||      | | ||| || | |||||||||||| ||||| | | |||| ||||||||| | ||||| |||||||| ||  ||| ||| |||| |||  |    
T  4651987 ttcttttgaggtgagttgtggtgacgagtgttttagatgtcgttttttcagtggttggtaactataggagtcagttgta--ggaggatgtttagtttgtt 4652084  T
Q  219 gggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgta 318  Q
    ||| ||||| |||||||||||||||| || |||| | ||||||||||||| |||||||||||||||||||||||||  | |||  |||||||||||| ||    
T  4652085 gggtgttgtacttatgggtgttgatcacagggttttttttgttggtgtttgttttcaggtgttccgcctatatacggtgtcttagtttgtactttctata 4652184  T
Q  319 acac 322  Q
    ||||    
T  4652185 acac 4652188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 2988092 - 2988000
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttac 119  Q
    |||||| | ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||    
T  2988092 aggttgtgcggtggtggaagctgaatgatctttagggaaggagttcttcggatgtggctcggtgttggtgatgaggacatggttctcttttac 2988000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 320
Target Start/End: Original strand, 37582405 - 37582501
Alignment:
Q  224 ttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgtaac 320  Q
    |||||||||||| ||||||||| |||| ||||||||||| ||||||||||| ||||||||| | ||||||| || |||  |||||||||||| ||||    
T  37582405 ttgtccttatggttgttgatcgtaagggtgtctttgttgatgtttattttcgggtgttccgtcaatatacgtcgtcttagtttgtactttctataac 37582501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 319
Target Start/End: Complemental strand, 2987892 - 2987806
Alignment:
Q  233 tgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgtaa 319  Q
    ||||||||||| ||| || ||| ||||||||||||| ||||| | ||||||||||||||||| ||||||  ||||||||||| ||||    
T  2987892 tgggtgttgattgcaggggtgtttttgttggtgtttgttttcggatgttccgcctatatacggcgccttagtttgtactttcggtaa 2987806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 35250249 - 35250192
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggc 84  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  35250249 aggttacgcggtggtggaagctgaatgatctttagagaaggagttcttcggaggtggc 35250192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 11839527 - 11839622
Alignment:
Q  232 atgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttga-tttgtactttctgtaacacaggt 326  Q
    |||||||||||||||| |  ||| ||||||||  ||| ||||  |||||||||| | ||||||||||||| | |||||||||||||||||||||||    
T  11839527 atgggtgttgatcgcaggaatgtatttgttgggatttgtttttgggtgttccgcttttatacgacgcctttagtttgtactttctgtaacacaggt 11839622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 32863289 - 32863253
Alignment:
Q  260 ttggtgtttattttcaggtgttccgcctatatacgac 296  Q
    |||||||||||||||||||||||||||||||||||||    
T  32863289 ttggtgtttattttcaggtgttccgcctatatacgac 32863253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 9313081 - 9313042
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  9313081 ggtgtttattttcgggtgttccgcctatatacgacgcctt 9313042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 376547 - 376508
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  376547 ggtgtttattttcaggtgttctgcctatatacggcgcctt 376508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 16149100 - 16149155
Alignment:
Q  246 caaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    |||||||||||||   |||||||||||||  |||||||||||||||||| ||||||    
T  16149100 caaggttgtcttttagggtgtttattttcgcgtgttccgcctatatacggcgcctt 16149155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 29938986 - 29938935
Alignment:
Q  252 tgtctttgttggtgttta-ttttcaggtgttccgcctatatacgacgccttg 302  Q
    |||||||||||||||||  |||| |||||||||||||||||| |||||||||    
T  29938986 tgtctttgttggtgttttgtttttaggtgttccgcctatatatgacgccttg 29938935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 34775212 - 34775251
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  34775212 ggtgtttattttcgggtgttccgcctatatacggcgcctt 34775251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 52278622 - 52278661
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||||||||||||||||||||| | ||||||    
T  52278622 ggtgtttattttcaggtgttccgcctatatatggcgcctt 52278661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 50589016 - 50588974
Alignment:
Q  260 ttggtgtttatt-ttcaggtgttccgcctatatacgacgcctt 301  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  50589016 ttggtgtttattcttcaggtgttccgcctatatacggcgcctt 50588974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 226
Target Start/End: Original strand, 11839455 - 11839536
Alignment:
Q  145 gagtgttttggatgttgtctttcggtggttggttagtatagaagtcagttttaggggatgatatttatttttatgggagttg 226  Q
    ||||||| |||||||||| |||  ||||| ||| ||| ||| | ||||||||||| |||||| |||||||| ||||| ||||    
T  11839455 gagtgttatggatgttgttttttagtggtcggtaagtttaggaatcagttttaggagatgatgtttattttgatgggtgttg 11839536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 301
Target Start/End: Original strand, 19598989 - 19599030
Alignment:
Q  261 tggtgttta-ttttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||| ||||||||||||||||||||||||| ||||||    
T  19598989 tggtgtttacttttcaggtgttccgcctatatacggcgcctt 19599030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 27102522 - 27102554
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacg 294  Q
    ||||||||||||| |||||||||||||||||||    
T  27102522 ggtgtttattttcgggtgttccgcctatatacg 27102554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 7e-43; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 27 - 322
Target Start/End: Original strand, 38485663 - 38485966
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttac-catgtg 125  Q
    |||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||||   |||||||| | ||||||||||||||||||||  | |||    
T  38485663 aggttgcacggtggtggaagctgaatgatctttagagaaggagttcttcagatgtggctcattgttggtgataaggacttggttctcttttacaaaggtg 38485762  T
Q  126 ttc------gattagtagtagcgacgagtgttttggatg----ttgtctttcggtggttggttagtatagaagtcagttttaggggatgatatttatttt 215  Q
    |||      | | ||| || |||||||||||||||||||    || | |||| ||||||||| | ||||| |||||||||||   || ||| |||| |||    
T  38485763 ttcttttgaggtgagttgtggcgacgagtgttttggatgtcatttttttttcagtggttggtaactataggagtcagtttta---gaagatgtttagttt 38485859  T
Q  216 tatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttct 315  Q
      |||  ||||| |||||||||||||||||||  ||| | ||||||||||||| ||||| |||||||||||||| |||||||||||  ||| ||||||||    
T  38485860 gctggatgttgtacttatgggtgttgatcgcagagttttttttgttggtgtttgttttcgggtgttccgcctatttacgacgccttagtttatactttct 38485959  T
Q  316 gtaacac 322  Q
    |||||||    
T  38485960 gtaacac 38485966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 51 - 322
Target Start/End: Original strand, 9349841 - 9350113
Alignment:
Q  51 atgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttaccatg-tgttcgatt------agtagtagcga 143  Q
    ||||| |||||||||| |||||||||||||||||| |||||||||| |||| | |  |||||||||||| | | |||||  ||      |||||| ||||    
T  9349841 atgatatttagagaagaagttcttcggatgtggctcggtgttggtgatgagtattgtgttctcttttacaagggtgttcttttggggtgagtagtggcga 9349940  T
Q  144 cgagtgttttggatgttgtctttcggtggttggttagtatagaagtcagttttaggggatgatatttatttttatgggagttgtccttatgggtgttgat 243  Q
    |||||||| ||||||| || ||   ||||||||| |||||||     |||||||||||  ||| ||||||||  |||| |||||||||||||| ||||||    
T  9349941 cgagtgttatggatgtcgttttctagtggttggtaagtatag----gagttttagggg--gatgtttattttggtgggtgttgtccttatgggggttgat 9350034  T
Q  244 cgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgtaacac 322  Q
     ||| || |||||||||||||| || ||| ||||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  9350035 tgcaggggtgtctttgttggtgattttttccaggtgttccgcctatatacggcgccttggtttgtactttttgtaacac 9350113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 27 - 184
Target Start/End: Complemental strand, 46133249 - 46133091
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttaccatgtgt 126  Q
    |||||||||||||||||||||||| ||||||||||| || |||||||| ||||||| || |||||||||| ||| |||| ||||||||||||| | ||||    
T  46133249 aggttgcgtggtgggggaagctgattgatctttagataaagagttctttggatgtgactcggtgttggtgatgatgactgggttctcttttacaaggtgt 46133150  T
Q  127 tcgattagtagtagcgacgagtgttttggatgttg-tctttcggtggttggttagtata 184  Q
    | | | |||||| || ||||||||||||||||| | | |||| ||||||||||||||||    
T  46133149 ttggtgagtagtggcaacgagtgttttggatgtcgttttttcagtggttggttagtata 46133091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 3478689 - 3478728
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  3478689 ggtgtttattttcgggtgttccgcctatatacggcgcctt 3478728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 42533000 - 42532961
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  42533000 ggtgtttatttccaggtgttccgcctatatacggcgcctt 42532961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 27028465 - 27028538
Alignment:
Q  225 tgtccttatgggtgttgatcgcaaggttgtctttgttggtg-tttattttcaggtgttccgcctatatacgacg 297  Q
    ||||||| ||||||||||||||| || ||||||| |  ||| ||| |||| ||||||||| |||||||||||||    
T  27028465 tgtccttttgggtgttgatcgcatggatgtctttatcagtgttttgtttttaggtgttccacctatatacgacg 27028538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 7e-43; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 36 - 319
Target Start/End: Complemental strand, 30935353 - 30935060
Alignment:
Q  36 ggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttacca-tgtgttc------ 128  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||||  |||||||||||| |  ||||||          
T  30935353 ggtggtggaagctgaatgatctttagaaaaggagttcttcggatgtggctcggtgttggtgatgaggactgagttctcttttacaagggtgttcttttga 30935254  T
Q  129 gattagtagtagcgacgagtgttttggatgttgtcttt---cggtggttggttagtatagaagtcagttttaggggatgatatttatttttatgggagtt 225  Q
    | | |||||| |||||||||||| | ||||| || |||   |||||| |||| ||||||  ||||||||||||||| |||| ||||||||  |||  |||    
T  30935253 ggtgagtagtggcgacgagtgttatagatgtcgtttttttccggtggctggtaagtataagagtcagttttagggggtgatgtttattttggtggatgtt 30935154  T
Q  226 gtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgtaa 319  Q
    |  |||| ||||||||||  || |||||||||||||||||||| ||||| |||||| ||| |||||||||| ||||  |||||| |||| ||||    
T  30935153 gctcttaagggtgttgattacagggttgtctttgttggtgtttgttttcgggtgtttcgcttatatacgacaccttagtttgtattttcagtaa 30935060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 182 - 317
Target Start/End: Complemental strand, 1652696 - 1652561
Alignment:
Q  182 atagaagtcagttttaggggatgatatttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgtt 281  Q
    |||||||||||||||||||| |||| ||||||||  |||| |||||||||||| ||||||||||||||| ||||||||| |||||||| |||| ||||||    
T  1652696 atagaagtcagttttagggggtgatgtttattttggtgggtgttgtccttatgagtgttgatcgcaagggtgtctttgtgggtgttta-tttcgggtgtt 1652598  T
Q  282 ccgcctatatacgacgccttga-tttgtactttctgt 317  Q
    |||||||||||||||||||| | ||||||||||||||    
T  1652597 ccgcctatatacgacgcctttagtttgtactttctgt 1652561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 203 - 322
Target Start/End: Complemental strand, 7966864 - 7966746
Alignment:
Q  203 tgatatttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttg 302  Q
    |||| |||||||| |||||||||||| |||||||||| |||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||| |  |||     
T  7966864 tgatgtttattttgatgggagttgtctttatgggtgtggatcgcaaaggtgtctttgtttgtgtttgttttcgggtgttccgtctatatacggcatctt- 7966766  T
Q  303 atttgtactttctgtaacac 322  Q
    | ||||||||||||||||||    
T  7966765 aattgtactttctgtaacac 7966746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 301
Target Start/End: Original strand, 4171084 - 4171123
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  4171084 ggtgtttattttcaggtgttccgcctatatacgacgcctt 4171123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 298
Target Start/End: Original strand, 32010114 - 32010163
Alignment:
Q  249 ggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgc 298  Q
    ||||||||||   ||||||||||||||||| |||||||||||||||||||    
T  32010114 ggttgtcttttaaggtgtttattttcaggtattccgcctatatacgacgc 32010163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 1652850 - 1652790
Alignment:
Q  36 ggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtg 96  Q
    ||||| ||||| ||||||||||||||| ||||||||| ||| || ||||| ||||||||||    
T  1652850 ggtggcggaagttgaatgatctttagaaaaggagttcctcgaatttggctcggtgttggtg 1652790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 14893270 - 14893302
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacg 294  Q
    |||||||||||||||||||||||||||||||||    
T  14893270 ggtgtttattttcaggtgttccgcctatatacg 14893302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 38489082 - 38489160
Alignment:
Q  218 tgggagttgtccttatgggtgttgatcgcaaggttgtctttgttgg--tgtttattttcaggtgttccgcctatatacg 294  Q
    |||| ||||| ||| ||||||||||||||| || ||||||||||||  | ||  ||| |||||||||||||||||||||    
T  38489082 tgggtgttgttcttttgggtgttgatcgcatggatgtctttgttgggattttcgtttacaggtgttccgcctatatacg 38489160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 301
Target Start/End: Original strand, 47946049 - 47946080
Alignment:
Q  270 ttttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||||||||||||||||||||||    
T  47946049 ttttcaggtgttccgcctatatacgacgcctt 47946080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 50518830 - 50518791
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  50518830 ggtgtttattttcgggtgttccgcctatatacgacacctt 50518791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 22948397 - 22948347
Alignment:
Q  233 tgggtgttgatcgcaaggttgtctttgttggtg-tttattttcaggtgttc 282  Q
    ||||||||||||||| || |||||||||||||| ||| |||||||||||||    
T  22948397 tgggtgttgatcgcatgggtgtctttgttggtgttttgttttcaggtgttc 22948347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 22948488 - 22948434
Alignment:
Q  241 gatcgcaaggttgtctttgttggtgttta-ttttcaggtgttccgcctatatacg 294  Q
    ||||||| || |||||||||||||||||  |||||||||||||||| ||||||||    
T  22948488 gatcgcatgggtgtctttgttggtgttttgttttcaggtgttccgcatatatacg 22948434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 298
Target Start/End: Complemental strand, 25594250 - 25594213
Alignment:
Q  261 tggtgtttattttcaggtgttccgcctatatacgacgc 298  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  25594250 tggtgtttactttcgggtgttccgcctatatacgacgc 25594213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 37 - 322
Target Start/End: Complemental strand, 30236090 - 30235796
Alignment:
Q  37 gtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttaccatg-tgttcgatt--- 132  Q
    |||| ||||||||| ||||||||||| ||| ||||||| ||||||| || ||||||||| ||||||||| | |||||| || | | | |||||| ||       
T  30236090 gtggtggaagctgattgatctttagaaaagaagttctttggatgtgactcggtgttggtattgaggactggtttctctcttgctagggtgttcgtttgtg 30235991  T
Q  133 ---agtagtagcgacgagtgttttggatgttgtct-ttcggtggttggttagtatagaagtcagttttaggggatgatatttatttttatgggagttgtc 228  Q
       |||||| |||| ||||||| ||||||| || | ||   |||| ||||| ||||| ||||||||||||||| |||| ||||||||  |||| ||||||    
T  30235990 gtgagtagtggcgatgagtgttatggatgtcgtttatttaatggtcggttaatataggagtcagttttagggggtgatgtttattttggtgggtgttgtc 30235891  T
Q  229 cttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttga-tttgtactttctgtaacac 322  Q
    ||| |||||||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||  ||||| | ||||||| |||||||||||    
T  30235890 cttttgggtgttgatcgcaagggtgtctttgttggtgtttgttttcggatgttccgcctatatacggagcctttagtttgtaccttctgtaacac 30235796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 322
Target Start/End: Original strand, 35062565 - 35062860
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttacca-tgtg 125  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||    |||||||| |||||||| ||||||||||||| |  |||    
T  35062565 aggttgcgcggtggtggaaggtgaatgatctttagagaaggagttcttcggaggtggcacaatgttggtgatgaggactgggttctcttttacaagggtg 35062664  T
Q  126 ttc------gattagtagtagcgacgagtgttttggatgttgtctttcggtggttggttagtatagaagtcagttttaggggatgatatttatttttatg 219  Q
    |||      | | |||||| |||||||||||| |||||||||| |||  ||||||||||||||||  |||||||||||||||| |   ||| ||||  ||    
T  35062665 ttctcttgaggtgagtagtggcgacgagtgttatggatgttgttttttagtggttggttagtatatgagtcagttttaggggagg--tttttttttggtg 35062762  T
Q  220 ggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgtaa 319  Q
     | | ||||||| ||||||||||||||| ||      |||||||||||| ||||| ||||||| | ||||||||| ||  || ||||||| |||||||||    
T  35062763 tgtgatgtccttttgggtgttgatcgcaggg-----gttgttggtgtttgttttcgggtgttctgtctatatacggcgtattaatttgtattttctgtaa 35062857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 27 - 294
Target Start/End: Original strand, 10552375 - 10552641
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttacca-tgtg 125  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||||||| |||||   ||||||| | |||||||| ||||||||||||| |  |||    
T  10552375 aggttgcgttgtggtggaagctgaatgatctttagagaagaagttcttcggaggtggcacagtgttggagatgaggactgggttctcttttacaagggtg 10552474  T
Q  126 ttc------gattagtagtagcgacgagtgttttggatgttgtctttcggtggttggttagtatagaagtcagttttaggggatgatatttatttttatg 219  Q
    |||      | | |||||| ||||||||| || ||||||| || |||  ||||||| ||||||||  ||||||||||||||||||   ||||||||  |     
T  10552475 ttcttttgaggtgagtagtggcgacgagttttatggatgtcgttttttagtggttgcttagtatatgagtcagttttaggggatg---tttattttggtt 10552571  T
Q  220 ggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacg 294  Q
    || |||||||||| |||||||||| ||| ||      |||||||||||| ||||| | |||||||||||||||||    
T  10552572 ggtgttgtccttaagggtgttgattgcaggg-----gttgttggtgtttgttttcggatgttccgcctatatacg 10552641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 321
Target Start/End: Complemental strand, 5215073 - 5214988
Alignment:
Q  236 gtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgtaaca 321  Q
    |||||||||| | || |||||||||| | |||| ||||| |||||| |||||||||||| ||||||  ||||||||||||||||||    
T  5215073 gtgttgatcgtaggggtgtctttgttagagtttgttttcgggtgtttcgcctatatacggcgccttagtttgtactttctgtaaca 5214988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 293
Target Start/End: Complemental strand, 32945662 - 32945407
Alignment:
Q  42 ggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttac-catgtgttc------gattag 134  Q
    ||||||||||||||||||||| ||| |||||||| |||||| || |||||||||| ||| |||| | |||| ||||||  | ||||||      | | ||    
T  32945662 ggaagctgaatgatctttagaaaagaagttcttcagatgtgactcggtgttggtgatgatgactggtttcttttttacaaaagtgttcttttgaggtgag 32945563  T
Q  135 tagtagcgacgagtgttttggatgttg-tctttcggtggttggttagtatagaagtcagttttaggggatgatatttatttttatgggagttg-tcctta 232  Q
    |||| |||| ||||||| ||||||| | |||||| |  || |||  |||||| ||||||||||| ||| |||| ||||||||  |||  |||| ||||||    
T  32945562 tagtggcgatgagtgttatggatgtcgttctttcag-cgtcggtaggtataggagtcagttttaagggctgatgtttattttggtggatgttgatcctta 32945464  T
Q  233 tgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatac 293  Q
    || ||||||||||||||| |||||| | |    ||| ||||| ||||||||||||||||||    
T  32945463 tgagtgttgatcgcaagggtgtcttaggt----tttgttttcgggtgttccgcctatatac 32945407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 41791069 - 41791017
Alignment:
Q  187 agtcagttttaggggatgatatttatttttatgggagttgtccttatgggtgt 239  Q
    ||||||||||||||| |||| ||||||||  |||| |||||||||||| ||||    
T  41791069 agtcagttttagggggtgatgtttattttggtgggggttgtccttatgagtgt 41791017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 244
Target Start/End: Original strand, 36979029 - 36979245
Alignment:
Q  33 cgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttaccatgtgttcgatt 132  Q
    ||||||||| |||||||||||||| ||| |||| |||||||| ||||||||||||||||||||  | |||||| |||||||||||| || ||||| | |     
T  36979029 cgtggtgggagaagctgaatgatcattaaagaatgagttctttggatgtggcttggtgttggtaataaggactaggttctctttta-caggtgttaggtg 36979127  T
Q  133 agtagtagcgacgagtgttttggatgttg-tctttcggtggttggttagtatagaagtcagttt-----taggggatgatatttatttttatgggagttg 226  Q
    |||||| ||||| |||||||||||||||| | |||| ||||||||| ||||||  |||||||||     | ||||  ||| |||||||| ||||||||||    
T  36979128 agtagtggcgaccagtgttttggatgttgttttttcagtggttggtaagtataagagtcagtttgtgtgtggggggggatgtttattttgatgggagttg 36979227  T
Q  227 tccttatgggtgttgatc 244  Q
    ||||||||| ||||||||    
T  36979228 tccttatggatgttgatc 36979245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 29 - 321
Target Start/End: Original strand, 31721787 - 31722070
Alignment:
Q  29 gttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttaccatg----- 123  Q
    |||||| ||||| ||||| ||| |||||||||||||| |||||||| |||||||||| | ||||||||  |||||||  |||||||||||| | |         
T  31721787 gttgcgcggtggtggaagttgattgatctttagagaatgagttctttggatgtggctcgatgttggtgacgaggactgagttctcttttacaagggtgtt 31721886  T
Q  124 tgttcga--ttagtagtagcgacgagtgttttggatgttgtcttt-cggtggttggttagtatagaagtcagttttaggggatgatatttatttttatgg 220  Q
    | || ||  | |||||| |||||||||||| ||||||| || ||| | ||||||||| ||||||| ||||||||||||||  |||| ||||||||    |    
T  31721887 tttttgaggtgagtagtggcgacgagtgttatggatgtcgttttttcagtggttggtaagtataggagtcagttttaggg--tgatgtttatttt----g 31721980  T
Q  221 gagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgtaac 320  Q
    |           |||||||||||| || || || ||||||| |||||| ||||| ||||||||| ||||||||| ||||||  |||||||||||||||||    
T  31721981 g-----------tgggtgttgatcacatgggtgcctttgttagtgtttgttttcgggtgttccgtctatatacggcgccttagtttgtactttctgtaac 31722069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 301
Target Start/End: Original strand, 31742460 - 31742543
Alignment:
Q  218 tgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    |||| ||||||||||||||| ||||||||||||  |||||||  ||||||| ||||| ||||||||||||||||||| ||||||    
T  31742460 tgggtgttgtccttatgggttttgatcgcaagggagtctttgcaggtgtttgttttcgggtgttccgcctatatacggcgcctt 31742543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 13953989 - 13953950
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  13953989 ggtgtttattttcaggtgttccgcctatatacggcgcctt 13953950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 24436129 - 24436220
Alignment:
Q  223 gttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttc 314  Q
    |||||||||||| |||||||||| | |  |||||||||| |||||| ||||| | ||||||| ||||||| |||| |||  |||||||||||    
T  24436129 gttgtccttatgagtgttgatcgtaggagtgtctttgttagtgtttgttttcggatgttccgactatatatgacgtcttagtttgtactttc 24436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 301
Target Start/End: Complemental strand, 26405289 - 26405250
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||| ||||||||| ||||||||||||||||    
T  26405289 ggtgtttattttcgggtgttccgactatatacgacgcctt 26405250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 294
Target Start/End: Original strand, 30097673 - 30097705
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacg 294  Q
    ||||||||||||| |||||||||||||||||||    
T  30097673 ggtgtttattttcgggtgttccgcctatatacg 30097705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 187 - 301
Target Start/End: Complemental strand, 43373907 - 43373793
Alignment:
Q  187 agtcagttttaggggatgatatttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcc 286  Q
    ||||||||||||||| |||| ||||||||  |||| |||||||||||| ||||||||| || || ||||||||||||  ||| ||||| |||||| ||||    
T  43373907 agtcagttttagggggtgatgtttattttggtgggtgttgtccttatgtgtgttgatcacatgggtgtctttgttgggttttgttttcgggtgtttcgcc 43373808  T
Q  287 tatatacgacgcctt 301  Q
    ||||||| |||||||    
T  43373807 tatatacaacgcctt 43373793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 297
Target Start/End: Original strand, 43077270 - 43077342
Alignment:
Q  225 tgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacg 297  Q
    ||||||| || |||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43077270 tgtccttttgagtgttgatcgcaggggtgtctttgttggtgtttattttcaggtgttctgcctatatacgacg 43077342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 43374067 - 43373975
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttac 119  Q
    |||||||| ||||| ||||||||| ||||||||||| || ||||||||| || ||| || |||||||||| ||| |||||| |||||||||||    
T  43374067 aggttgcgcggtggtggaagctgattgatctttagaaaatgagttcttcagaggtgactcggtgttggtgatgatgacttgtttctcttttac 43373975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 19432160 - 19432242
Alignment:
Q  37 gtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctcttttac 119  Q
    |||| |||||||||||||| ||| ||  ||||||| ||||| |||| ||||||||||||| ||||||||   |||||||||||    
T  19432160 gtggtggaagctgaatgatatttggaagaggagttattcggttgtgacttggtgttggtgatgaggactgatttctcttttac 19432242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 322
Target Start/End: Original strand, 19432304 - 19432439
Alignment:
Q  187 agtcagttttaggggatgatatttatttttatgggagttgtccttatgggtgttgatcgca-aggttgtctttgttggtgtttattttcaggtgttccgc 285  Q
    ||||||||||||||| |||| ||||||||  |||| ||| ||| ||||||||||||| ||| |||  | |||||||||  ||| ||||| | |||||||     
T  19432304 agtcagttttagggggtgatctttattttggtgggtgttatccctatgggtgttgatggcagagg--ggctttgttgggttttgttttcggatgttccgt 19432401  T
Q  286 ctatatacgacgcc-ttgatttgtactttctgtaacac 322  Q
    ||||||||| |||| ||  ||||||| |||||||||||    
T  19432402 ctatatacggcgccttttgtttgtaccttctgtaacac 19432439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 293
Target Start/End: Original strand, 28967215 - 28967246
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatac 293  Q
    ||||||||||||||||||||||||||||||||    
T  28967215 ggtgtttattttcaggtgttccgcctatatac 28967246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 35800729 - 35800842
Alignment:
Q  208 tttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgcc-ttgattt 306  Q
    |||||||| ||||| ||| || |||||||||||||||||| || | | || |||||||||| ||||  ||||||||| ||||||||  |||| ||  |||    
T  35800729 tttattttgatgggtgttttc-ttatgggtgttgatcgcatgggtattttcgttggtgtttgtttttcggtgttccgtctatatacagcgccgttatttt 35800827  T
Q  307 gtactttctgtaaca 321  Q
    ||||||||| |||||    
T  35800828 gtactttctttaaca 35800842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 300
Target Start/End: Complemental strand, 41117709 - 41117671
Alignment:
Q  262 ggtgtttattttcaggtgttccgcctatatacgacgcct 300  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  41117709 ggtgtttattttcgggtgttccgcctatatacgatgcct 41117671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 159 - 268
Target Start/End: Complemental strand, 24740047 - 24739938
Alignment:
Q  159 ttgtctttcggtggttggttagtatagaagtcagttttaggggatgatatttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtcttt 258  Q
    |||| |||| ||||| | ||| |||| |||||| ||||||| |  ||| ||||||||  |||| ||| |||||||| ||| ||||||||||| ||| |||    
T  24740047 ttgtttttcagtggtcgattaatatacaagtcatttttaggtggggatgtttattttagtgggtgttatccttatgagtggtgatcgcaagggtgttttt 24739948  T
Q  259 gttggtgttt 268  Q
     |||||||||    
T  24739947 attggtgttt 24739938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 35336856 - 35336949
Alignment:
Q  209 ttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtg-tttattttcaggtgttccgcctatatacgacgcctt 301  Q
    |||||||  |||| |||||||||| | |||||||| |||    |||||||||||||| ||||||||| | ||||||| ||||||||| ||||||    
T  35336856 ttattttggtgggtgttgtccttacgagtgttgattgcatatgtgtctttgttggtgttttattttcggatgttccgtctatatacggcgcctt 35336949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 35800597 - 35800666
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtg 96  Q
    ||||| || ||||| |||| ||||||||||||| |  ||||||||||| |||||||||| | ||||||||    
T  35800597 aggtttcgcggtggtggaacctgaatgatctttggtaaaggagttctttggatgtggctcgttgttggtg 35800666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 39420778 - 39420738
Alignment:
Q  261 tggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||| |||||| ||||||||||||||||||||| ||||    
T  39420778 tggtgttcattttcgggtgttccgcctatatacgacacctt 39420738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 9224201 - 9224312
Alignment:
Q  187 agtcagttttaggggatgatatttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcc 286  Q
    |||||||||||||||  ||| |||||||| |||||  |   ||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||  |    
T  9224201 agtcagttttagggg--gatgtttattttgatgggtttatcccttatggg-gttgatcgcagggatgtctttgttggtgtttattttcgggtgttccttc 9224297  T
Q  287 tatatacgacgcctt 301  Q
    |||||||||| ||||    
T  9224298 tatatacgacacctt 9224312  T

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Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 12794212 - 12794303
Alignment:
Q  27 aggttgcgtggtgggggaagctgaatgatctttagagaaggagttcttcggatgtggcttggtgttggtgttgaggacttggttctctttta 118  Q
    |||||||| ||||| |||||| || ||||||||||| ||||| |||||| |||||| || |||||||| |||||||||| | ||||||||||    
T  12794212 aggttgcgcggtggtggaagcagattgatctttagaaaaggatttcttcagatgtgactcggtgttggggttgaggactggtttctctttta 12794303  T

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Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 6946949 - 6946871
Alignment:
Q  224 ttgtccttatgggtgttgatcgcaaggttgtctttgttggtg-tttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||| |||||  |||||||  ||||||||| ||||||    
T  6946949 ttgtccttatgggtgttgatcgcaagggtgtctttgttggtgttttgttttcgagtgttccatctatatacggcgcctt 6946871  T

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Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 225 - 301
Target Start/End: Complemental strand, 26534508 - 26534433
Alignment:
Q  225 tgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||| |||||||| || ||| || ||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  26534508 tgtccttttgggtgtttattgcaggggtgtctttgttggtattg-ttttcaggtgttccgcctatatacgacgcctt 26534433  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 318
Target Start/End: Original strand, 27774844 - 27774991
Alignment:
Q  164 tttcggtggttggttagtatagaagtcagtttt-aggggatgatatttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttg 262  Q
    |||| ||||||||| | |||||||||||||||| ||||||||   ||||||||  |||| |||||     ||||||||||||| | |  |||||||||||    
T  27774844 tttcagtggttggtaaatatagaagtcagtttttaggggatg---tttattttggtgggtgttgt-----tgggtgttgatcgtaggagtgtctttgttg 27774935  T
Q  263 gtgtttattttcaggtgttccgcctatatacgacgccttgatttgtactttctgta 318  Q
    |||||| ||||  | ||||||  ||||||||||||||||  |||||||||| ||||    
T  27774936 gtgtttgtttttggatgttccatctatatacgacgccttagtttgtactttttgta 27774991  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 12794398 - 12794496
Alignment:
Q  203 tgatatttatttttatgggagttgtccttatgggtgttgatcgcaaggttgtctttgttggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    |||| ||||||||  |||  ||||||||| |||||||||||||||    ||||||||||||||||  ||||| | ||||||| ||||||||| ||||||    
T  12794398 tgatgtttattttggtggatgttgtccttttgggtgttgatcgcagatgtgtctttgttggtgttcgttttcggatgttccgtctatatacggcgcctt 12794496  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 119
Target Start/End: Complemental strand, 26215989 - 26215899
Alignment:
Q  30 ttgcgtggtgggggaagctgaatgatctttagagaaggagtt-cttcggatgtggcttggtgttggtgttgaggacttggttctcttttac 119  Q
    ||||| ||||| ||||||||| |||||||| || |||||||| ||||  ||||||||  ||||||||| |||||||| | |||||||||||    
T  26215989 ttgcgcggtggtggaagctgattgatctttggaaaaggagtttcttcaaatgtggctcagtgttggtgatgaggactagtttctcttttac 26215899  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 17278201 - 17278164
Alignment:
Q  264 tgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  17278201 tgtttattttcgggtgttccgcctatatacgacgcctt 17278164  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 301
Target Start/End: Original strand, 5746966 - 5747014
Alignment:
Q  252 tgtctttgttggtgtttattttcaggtgttccgcctatatacgacgcctt 301  Q
    ||||||| ||| |||| ||||| |||||||||||||||||||||||||||    
T  5746966 tgtctttattgatgttcatttt-aggtgttccgcctatatacgacgcctt 5747014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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