View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5338_low_4 (Length: 306)

Name: NF5338_low_4
Description: NF5338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5338_low_4
NF5338_low_4
[»] chr5 (58 HSPs)
chr5 (108-299)||(14980006-14980196)
chr5 (109-299)||(43257815-43258007)
chr5 (111-299)||(166604-166803)
chr5 (111-299)||(36660426-36660623)
chr5 (199-299)||(4967446-4967546)
chr5 (189-299)||(31889807-31889917)
chr5 (111-299)||(34919752-34919933)
chr5 (111-296)||(4011618-4011790)
chr5 (111-296)||(7388150-7388335)
chr5 (171-299)||(12167565-12167696)
chr5 (111-299)||(31557295-31557489)
chr5 (109-282)||(33693737-33693911)
chr5 (111-299)||(4751485-4751685)
chr5 (118-299)||(36783361-36783553)
chr5 (114-300)||(16886087-16886268)
chr5 (111-299)||(4742221-4742421)
chr5 (111-242)||(42329556-42329700)
chr5 (118-299)||(15400177-15400370)
chr5 (186-283)||(39059890-39059987)
chr5 (108-242)||(793616-793763)
chr5 (189-299)||(27652274-27652384)
chr5 (189-278)||(8961011-8961099)
chr5 (111-271)||(27810345-27810517)
chr5 (194-299)||(1513072-1513177)
chr5 (189-242)||(33822513-33822566)
chr5 (111-179)||(13066712-13066780)
chr5 (111-179)||(29653600-29653668)
chr5 (111-161)||(12992063-12992113)
chr5 (108-161)||(32690835-32690888)
chr5 (189-242)||(34171251-34171304)
chr5 (111-179)||(4371362-4371430)
chr5 (111-263)||(33584964-33585129)
chr5 (111-179)||(38982231-38982299)
chr5 (114-161)||(41845386-41845433)
chr5 (111-161)||(31889741-31889791)
chr5 (192-241)||(29044811-29044860)
chr5 (111-179)||(4833719-4833787)
chr5 (190-242)||(36296144-36296196)
chr5 (189-240)||(29653526-29653577)
chr5 (242-296)||(24436498-24436552)
chr5 (111-161)||(34171163-34171213)
chr5 (189-299)||(4371451-4371548)
chr5 (191-228)||(4833657-4833694)
chr5 (115-176)||(33822592-33822653)
chr5 (194-231)||(38982168-38982205)
chr5 (108-140)||(24436585-24436617)
chr5 (111-155)||(27658682-27658726)
chr5 (118-157)||(29051620-29051659)
chr5 (110-161)||(32963111-32963162)
chr5 (111-178)||(33741464-33741531)
chr5 (111-162)||(39059805-39059856)
chr5 (111-161)||(17674207-17674257)
chr5 (194-232)||(32690753-32690791)
chr5 (230-303)||(17674329-17674402)
chr5 (118-179)||(28640088-28640149)
chr5 (195-240)||(32963022-32963066)
chr5 (192-233)||(33741556-33741597)
chr5 (222-282)||(8755591-8755651)
[»] chr3 (73 HSPs)
chr3 (111-299)||(26965463-26965653)
chr3 (112-299)||(27483148-27483337)
chr3 (111-296)||(2567970-2568157)
chr3 (104-299)||(19552532-19552730)
chr3 (111-296)||(37225553-37225749)
chr3 (108-299)||(34059872-34060063)
chr3 (108-299)||(36771531-36771724)
chr3 (108-296)||(1340887-1341077)
chr3 (111-299)||(25061703-25061891)
chr3 (111-299)||(44648365-44648555)
chr3 (108-299)||(790092-790270)
chr3 (105-299)||(31290929-31291124)
chr3 (108-299)||(647547-647748)
chr3 (152-294)||(40048925-40049067)
chr3 (111-299)||(46362965-46363165)
chr3 (116-296)||(35239390-35239556)
chr3 (111-296)||(44854314-44854508)
chr3 (112-299)||(38457460-38457658)
chr3 (112-294)||(53716029-53716196)
chr3 (189-300)||(2662446-2662557)
chr3 (108-299)||(43580471-43580677)
chr3 (111-299)||(83295-83493)
chr3 (109-282)||(4476334-4476507)
chr3 (109-282)||(42740229-42740403)
chr3 (108-229)||(43599855-43599978)
chr3 (111-263)||(54933194-54933359)
chr3 (203-298)||(38165617-38165712)
chr3 (186-278)||(41287163-41287255)
chr3 (108-294)||(4391900-4392088)
chr3 (189-299)||(27039415-27039524)
chr3 (111-242)||(2988620-2988763)
chr3 (189-299)||(5244673-5244782)
chr3 (201-282)||(43736842-43736922)
chr3 (143-282)||(9167661-9167799)
chr3 (189-299)||(20512449-20512559)
chr3 (108-296)||(22414751-22414948)
chr3 (189-299)||(54261505-54261615)
chr3 (104-161)||(13485909-13485966)
chr3 (114-263)||(25722450-25722612)
chr3 (189-242)||(51381814-51381867)
chr3 (111-299)||(27027732-27027933)
chr3 (108-179)||(32303991-32304062)
chr3 (111-242)||(43169333-43169477)
chr3 (114-292)||(43600152-43600341)
chr3 (189-263)||(43687872-43687946)
chr3 (118-294)||(45095559-45095723)
chr3 (189-242)||(53560754-53560807)
chr3 (204-296)||(22731035-22731126)
chr3 (114-242)||(44645340-44645481)
chr3 (189-231)||(3000841-3000883)
chr3 (111-176)||(22730924-22730989)
chr3 (111-179)||(54261414-54261482)
chr3 (195-242)||(42007072-42007119)
chr3 (189-231)||(16240664-16240706)
chr3 (108-161)||(5244582-5244635)
chr3 (193-242)||(32303915-32303964)
chr3 (113-178)||(35099453-35099518)
chr3 (111-176)||(36310339-36310404)
chr3 (189-242)||(36541581-36541634)
chr3 (111-179)||(43687969-43688040)
chr3 (111-179)||(51381720-51381789)
chr3 (111-175)||(50420258-50420321)
chr3 (231-282)||(43599520-43599571)
chr3 (111-174)||(49470788-49470851)
chr3 (119-161)||(15514830-15514872)
chr3 (111-176)||(20512585-20512651)
chr3 (189-231)||(35099389-35099431)
chr3 (114-179)||(36541493-36541558)
chr3 (118-179)||(41287082-41287145)
chr3 (243-299)||(42857046-42857102)
chr3 (112-176)||(42857148-42857212)
chr3 (108-180)||(44676216-44676288)
chr3 (116-179)||(52222831-52222892)
[»] chr4 (64 HSPs)
chr4 (111-296)||(52732594-52732782)
chr4 (109-299)||(43421082-43421274)
chr4 (108-294)||(51930592-51930765)
chr4 (143-297)||(34360041-34360197)
chr4 (111-282)||(15501129-15501302)
chr4 (108-299)||(21045148-21045327)
chr4 (118-299)||(54512034-54512217)
chr4 (111-299)||(44855237-44855438)
chr4 (111-299)||(32140944-32141119)
chr4 (111-299)||(36805408-36805600)
chr4 (111-292)||(50072276-50072438)
chr4 (108-299)||(31817157-31817334)
chr4 (111-282)||(37445655-37445837)
chr4 (111-294)||(19849079-19849273)
chr4 (200-299)||(56422957-56423056)
chr4 (111-299)||(34096010-34096210)
chr4 (189-295)||(39671068-39671174)
chr4 (108-296)||(45520419-45520617)
chr4 (111-263)||(24259606-24259771)
chr4 (108-296)||(30022060-30022258)
chr4 (193-299)||(42672477-42672583)
chr4 (111-299)||(22212336-22212535)
chr4 (108-296)||(11835099-11835295)
chr4 (111-240)||(17499732-17499874)
chr4 (111-299)||(56556237-56556410)
chr4 (111-180)||(6462004-6462073)
chr4 (118-231)||(31987306-31987430)
chr4 (111-266)||(35928486-35928650)
chr4 (108-299)||(47321136-47321341)
chr4 (189-241)||(54233902-54233954)
chr4 (189-296)||(3093433-3093539)
chr4 (111-242)||(31941553-31941697)
chr4 (108-299)||(34124287-34124491)
chr4 (189-242)||(45889649-45889702)
chr4 (114-242)||(28116243-28116384)
chr4 (232-296)||(45903377-45903441)
chr4 (111-179)||(51434346-51434414)
chr4 (189-263)||(4408169-4408243)
chr4 (111-161)||(19282517-19282567)
chr4 (111-161)||(29840070-29840120)
chr4 (185-295)||(38761788-38761898)
chr4 (189-293)||(29289852-29289959)
chr4 (189-242)||(51434270-51434323)
chr4 (189-231)||(38692474-38692516)
chr4 (210-299)||(51737280-51737367)
chr4 (120-299)||(30492732-30492914)
chr4 (191-242)||(6462102-6462153)
chr4 (111-166)||(39671183-39671238)
chr4 (114-169)||(45903504-45903559)
chr4 (111-161)||(6231652-6231702)
chr4 (189-299)||(17317805-17317910)
chr4 (191-236)||(34534111-34534157)
chr4 (108-161)||(6232141-6232194)
chr4 (112-161)||(17317950-17317999)
chr4 (193-242)||(55126587-55126636)
chr4 (108-240)||(6510110-6510253)
chr4 (111-179)||(54091953-54092021)
chr4 (111-158)||(1868208-1868255)
chr4 (111-232)||(32141163-32141280)
chr4 (118-161)||(45049711-45049754)
chr4 (123-169)||(44835341-44835387)
chr4 (108-161)||(38692406-38692459)
chr4 (251-299)||(29840201-29840249)
chr4 (189-241)||(55548234-55548286)
[»] chr2 (47 HSPs)
chr2 (109-297)||(29795156-29795346)
chr2 (134-299)||(40410473-40410640)
chr2 (118-299)||(40987237-40987418)
chr2 (111-299)||(4840682-4840881)
chr2 (111-279)||(1381748-1381916)
chr2 (113-299)||(7743401-7743598)
chr2 (114-296)||(1298738-1298931)
chr2 (112-282)||(4766184-4766341)
chr2 (108-299)||(24775184-24775386)
chr2 (116-282)||(36360347-36360522)
chr2 (111-296)||(34225771-34225944)
chr2 (189-293)||(43460860-43460961)
chr2 (109-282)||(42969895-42970069)
chr2 (197-283)||(14378219-14378305)
chr2 (111-282)||(4536572-4536742)
chr2 (189-299)||(37106949-37107061)
chr2 (114-256)||(16316710-16316863)
chr2 (108-179)||(33093363-33093434)
chr2 (108-299)||(43388612-43388814)
chr2 (111-231)||(1360175-1360306)
chr2 (111-179)||(18374850-18374918)
chr2 (111-299)||(14698010-14698187)
chr2 (189-282)||(43344195-43344288)
chr2 (192-263)||(775875-775946)
chr2 (111-242)||(2459771-2459915)
chr2 (189-263)||(4566112-4566186)
chr2 (198-300)||(11171839-11171941)
chr2 (111-179)||(10580944-10581012)
chr2 (111-242)||(41984416-41984561)
chr2 (189-242)||(25332659-25332712)
chr2 (189-242)||(39866683-39866736)
chr2 (189-241)||(10580869-10580921)
chr2 (118-176)||(39866762-39866820)
chr2 (245-295)||(44228609-44228659)
chr2 (111-179)||(775972-776039)
chr2 (112-164)||(14511459-14511511)
chr2 (190-242)||(33093458-33093510)
chr2 (118-169)||(14378320-14378371)
chr2 (111-162)||(45148055-45148106)
chr2 (111-161)||(6591963-6592013)
chr2 (108-174)||(25332566-25332631)
chr2 (108-178)||(36685828-36685898)
chr2 (111-176)||(43344312-43344375)
chr2 (194-231)||(14511552-14511589)
chr2 (125-161)||(4566227-4566263)
chr2 (108-180)||(43427373-43427445)
chr2 (189-248)||(45147982-45148042)
[»] chr1 (62 HSPs)
chr1 (111-299)||(48259818-48260008)
chr1 (111-299)||(84473-84648)
chr1 (111-298)||(11650056-11650254)
chr1 (112-299)||(1430491-1430666)
chr1 (114-299)||(40060861-40061048)
chr1 (111-295)||(24040983-24041155)
chr1 (189-298)||(52403563-52403672)
chr1 (112-294)||(1428865-1429059)
chr1 (108-296)||(5317535-5317734)
chr1 (112-299)||(37437358-37437549)
chr1 (111-299)||(43929683-43929881)
chr1 (189-299)||(10690910-10691020)
chr1 (156-299)||(30006182-30006327)
chr1 (186-299)||(6332251-6332364)
chr1 (114-299)||(28751363-28751560)
chr1 (111-299)||(12002244-12002443)
chr1 (114-282)||(17919793-17919971)
chr1 (189-294)||(43105562-43105667)
chr1 (111-299)||(50349812-50350012)
chr1 (104-241)||(44582791-44582941)
chr1 (108-299)||(2459003-2459203)
chr1 (111-242)||(38132202-38132322)
chr1 (199-283)||(45749470-45749554)
chr1 (111-242)||(26252116-26252260)
chr1 (108-299)||(44583767-44583968)
chr1 (194-296)||(2245880-2245982)
chr1 (111-256)||(22664937-22665091)
chr1 (111-239)||(254926-255068)
chr1 (102-274)||(48319981-48320153)
chr1 (111-237)||(17806392-17806529)
chr1 (118-282)||(40719020-40719195)
chr1 (111-231)||(12851739-12851870)
chr1 (189-261)||(43755115-43755187)
chr1 (189-263)||(49894869-49894943)
chr1 (230-296)||(50158276-50158342)
chr1 (189-242)||(42650261-42650314)
chr1 (114-179)||(45377236-45377301)
chr1 (189-240)||(5854238-5854289)
chr1 (189-235)||(672300-672346)
chr1 (111-161)||(9333105-9333155)
chr1 (111-161)||(9356878-9356928)
chr1 (111-299)||(15698705-15698905)
chr1 (189-242)||(28200234-28200287)
chr1 (189-241)||(9552368-9552420)
chr1 (108-176)||(42650339-42650407)
chr1 (111-179)||(44024543-44024611)
chr1 (191-294)||(43738214-43738317)
chr1 (197-239)||(35149394-35149436)
chr1 (111-179)||(28200310-28200379)
chr1 (114-174)||(50158397-50158458)
chr1 (111-159)||(9552436-9552484)
chr1 (111-178)||(15647150-15647215)
chr1 (114-162)||(43755054-43755102)
chr1 (114-166)||(49894807-49894859)
chr1 (191-263)||(50591309-50591381)
chr1 (108-179)||(5854312-5854383)
chr1 (111-166)||(26582923-26582978)
chr1 (112-158)||(11134568-11134614)
chr1 (118-179)||(2245791-2245852)
chr1 (111-175)||(6332164-6332229)
chr1 (111-175)||(43738344-43738408)
chr1 (108-180)||(50249305-50249377)
[»] chr7 (53 HSPs)
chr7 (111-294)||(28044101-28044286)
chr7 (108-299)||(41905890-41906091)
chr7 (111-299)||(32275203-32275393)
chr7 (108-298)||(36447567-36447759)
chr7 (108-299)||(18886665-18886843)
chr7 (121-299)||(34002087-34002277)
chr7 (117-295)||(22627313-22627495)
chr7 (111-299)||(42121549-42121740)
chr7 (108-299)||(17869233-17869435)
chr7 (115-265)||(40207379-40207528)
chr7 (108-296)||(33056242-33056435)
chr7 (186-292)||(34733394-34733500)
chr7 (111-299)||(3680878-3681077)
chr7 (108-298)||(1103480-1103681)
chr7 (189-282)||(42259521-42259614)
chr7 (111-299)||(40298846-40299036)
chr7 (108-299)||(32345789-32345993)
chr7 (111-242)||(19906413-19906555)
chr7 (197-296)||(26527356-26527454)
chr7 (189-276)||(42010553-42010640)
chr7 (114-179)||(19288434-19288499)
chr7 (111-263)||(26963478-26963643)
chr7 (108-179)||(43813431-43813502)
chr7 (189-299)||(48838635-48838750)
chr7 (189-263)||(10684820-10684894)
chr7 (189-263)||(39117479-39117553)
chr7 (111-176)||(30514972-30515037)
chr7 (111-240)||(36447083-36447225)
chr7 (108-176)||(36836055-36836123)
chr7 (108-179)||(22597226-22597297)
chr7 (111-241)||(31416763-31416906)
chr7 (189-242)||(6521907-6521960)
chr7 (189-242)||(19277057-19277110)
chr7 (186-283)||(30833066-30833162)
chr7 (114-179)||(42044066-42044131)
chr7 (190-263)||(47272240-47272313)
chr7 (186-282)||(33845391-33845478)
chr7 (110-161)||(32873268-32873319)
chr7 (111-161)||(18733452-18733502)
chr7 (118-179)||(19920358-19920419)
chr7 (115-162)||(5723006-5723053)
chr7 (186-229)||(18733540-18733583)
chr7 (189-227)||(5723090-5723128)
chr7 (108-178)||(10684918-10684988)
chr7 (187-241)||(29001577-29001631)
chr7 (108-180)||(715947-716019)
chr7 (189-240)||(36836148-36836199)
chr7 (111-178)||(37815722-37815789)
chr7 (102-161)||(40805014-40805073)
chr7 (108-150)||(42753703-42753745)
chr7 (252-293)||(32873127-32873168)
chr7 (111-171)||(18292333-18292393)
chr7 (111-179)||(42259635-42259702)
[»] scaffold0072 (1 HSPs)
scaffold0072 (118-296)||(12040-12219)
[»] chr8 (56 HSPs)
chr8 (111-299)||(7612496-7612694)
chr8 (109-299)||(45187251-45187441)
chr8 (109-299)||(27109775-27109977)
chr8 (111-240)||(1774085-1774214)
chr8 (108-299)||(38329010-38329187)
chr8 (190-296)||(2067788-2067894)
chr8 (111-299)||(9022393-9022593)
chr8 (114-263)||(16208951-16209102)
chr8 (110-282)||(22601133-22601315)
chr8 (111-271)||(29931224-29931386)
chr8 (116-299)||(32326680-32326875)
chr8 (111-298)||(36915365-36915561)
chr8 (189-299)||(6839294-6839404)
chr8 (109-282)||(41414838-41415012)
chr8 (189-299)||(11335994-11336098)
chr8 (116-242)||(34168224-34168355)
chr8 (111-263)||(14541737-14541900)
chr8 (114-296)||(7129302-7129476)
chr8 (114-265)||(18666534-18666672)
chr8 (103-232)||(2803268-2803400)
chr8 (112-282)||(30788934-30789115)
chr8 (111-242)||(8471279-8471399)
chr8 (197-298)||(32737861-32737961)
chr8 (233-298)||(24732079-24732144)
chr8 (115-282)||(41790113-41790268)
chr8 (189-299)||(11257627-11257736)
chr8 (111-231)||(156239-156358)
chr8 (108-240)||(26438970-26439102)
chr8 (113-241)||(34461595-34461737)
chr8 (111-179)||(42946120-42946188)
chr8 (121-232)||(8107191-8107304)
chr8 (204-296)||(5588426-5588517)
chr8 (113-179)||(3095590-3095656)
chr8 (192-242)||(27416593-27416643)
chr8 (241-294)||(2812915-2812968)
chr8 (111-176)||(5588563-5588628)
chr8 (118-231)||(8382501-8382625)
chr8 (111-160)||(11257540-11257589)
chr8 (189-242)||(13109076-13109129)
chr8 (189-282)||(39970412-39970496)
chr8 (191-263)||(5044218-5044290)
chr8 (108-176)||(33870749-33870817)
chr8 (195-295)||(42709949-42710048)
chr8 (114-160)||(27416502-27416548)
chr8 (111-179)||(39970323-39970390)
chr8 (109-140)||(11335838-11335869)
chr8 (111-174)||(32061515-32061578)
chr8 (115-161)||(2067725-2067770)
chr8 (116-178)||(5295494-5295556)
chr8 (245-299)||(32061414-32061468)
chr8 (189-227)||(32661392-32661430)
chr8 (111-161)||(35052469-35052519)
chr8 (242-299)||(3095468-3095525)
chr8 (118-179)||(32661310-32661371)
chr8 (114-162)||(13108989-13109037)
chr8 (111-175)||(32271507-32271571)
[»] chr6 (34 HSPs)
chr6 (108-294)||(1924634-1924821)
chr6 (111-282)||(12828653-12828835)
chr6 (111-299)||(29915539-29915740)
chr6 (111-299)||(31275596-31275796)
chr6 (116-296)||(26669056-26669247)
chr6 (112-299)||(23936538-23936735)
chr6 (111-299)||(29927205-29927405)
chr6 (111-299)||(32258720-32258910)
chr6 (111-242)||(17345146-17345290)
chr6 (193-294)||(34439368-34439470)
chr6 (111-179)||(4123941-4124009)
chr6 (111-179)||(4132061-4132129)
chr6 (111-179)||(8052343-8052410)
chr6 (111-179)||(11785189-11785255)
chr6 (189-255)||(10494760-10494827)
chr6 (189-240)||(34576633-34576684)
chr6 (191-299)||(4131903-4132008)
chr6 (111-176)||(6143082-6143147)
chr6 (103-179)||(30627081-30627157)
chr6 (192-242)||(26189600-26189651)
chr6 (111-174)||(34576542-34576605)
chr6 (108-154)||(19689945-19689991)
chr6 (116-161)||(3015919-3015964)
chr6 (111-176)||(6140598-6140662)
chr6 (189-242)||(25932718-25932771)
chr6 (111-176)||(34439503-34439567)
chr6 (111-179)||(26189506-26189574)
chr6 (207-242)||(6992508-6992543)
chr6 (111-142)||(19416857-19416888)
chr6 (195-282)||(30627184-30627262)
chr6 (111-177)||(10494850-10494916)
chr6 (243-292)||(19689809-19689858)
chr6 (111-180)||(29399944-29400013)
chr6 (191-294)||(4123815-4123918)
[»] scaffold0119 (1 HSPs)
scaffold0119 (116-296)||(1546-1737)
[»] scaffold0580 (4 HSPs)
scaffold0580 (217-296)||(1689-1768)
scaffold0580 (217-296)||(9428-9507)
scaffold0580 (114-161)||(1642-1691)
scaffold0580 (114-161)||(9381-9430)
[»] scaffold0238 (2 HSPs)
scaffold0238 (189-299)||(15995-16104)
scaffold0238 (118-179)||(16125-16186)
[»] scaffold0886 (1 HSPs)
scaffold0886 (111-299)||(4063-4263)
[»] scaffold0047 (1 HSPs)
scaffold0047 (111-242)||(70465-70609)
[»] scaffold0189 (1 HSPs)
scaffold0189 (111-299)||(13023-13213)
[»] scaffold0194 (2 HSPs)
scaffold0194 (230-299)||(8277-8346)
scaffold0194 (111-161)||(8156-8206)
[»] scaffold0003 (2 HSPs)
scaffold0003 (111-179)||(321724-321792)
scaffold0003 (189-242)||(321815-321868)
[»] scaffold0519 (2 HSPs)
scaffold0519 (111-160)||(7803-7852)
scaffold0519 (189-222)||(7732-7765)
[»] scaffold0007 (1 HSPs)
scaffold0007 (197-231)||(158195-158229)
[»] scaffold0060 (1 HSPs)
scaffold0060 (111-155)||(31623-31667)


Alignment Details
Target: chr5 (Bit Score: 156; Significance: 7e-83; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 14980196 - 14980006
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatg 207  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| ||| ||||| || ||||||||||||||    
T  14980196 aatttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctctccaactttt-tctcacaattttcaatg 14980098  T
Q  208 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14980097 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattccatttcttaatctgtg 14980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 109 - 299
Target Start/End: Complemental strand, 43258007 - 43257815
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatct--tttctcacacaattttcaat 206  Q
    |||| ||| |||||||||||||||||||||||| |||| || ||||||||||| ||| ||| |||| ||||  || ||  ||||||||||||||||||||    
T  43258007 atttattttaaaatgaatgtcactttacatttccaatataactttaatttttttctttcaactttatcctcttcaactgttttctcacacaattttcaat 43257908  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||||| || |||||||||||||||  |||  ||||||||||    
T  43257907 gcaactttaagtttgtctatttcttataaagtaagggcagtttagtataagtgttatgtctaatgattatttcatttcattctttaatctgtg 43257815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 166803 - 166604
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatctttt--ctcacacaat 199  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||          ||| |||||  ||||||||||    
T  166803 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttttctcacacaat 166704  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||||| |||||||||||| |||||   ||||||||||| ||||||||||||| || |||||||||||||||  ||| |||||||||||    
T  166703 tttcaatgcaactttaagtttgtctttttcatataatacaagggcagtttagtaaaagtgttatttctaatgattatttcatttcattccttaatctgtg 166604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 36660426 - 36660623
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcacacaattt 201  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| |||||||||          ||| |||||||| ||||||||    
T  36660426 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccagcttttctctcacaattt 36660525  T
Q  202 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |  || ||||||||| ||||||||||||||||||||||||| || ||| ||||||||||||| || |||||||||||||||  ||| |||||||||||    
T  36660526 tttatacaactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctgtg 36660623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 199 - 299
Target Start/End: Complemental strand, 4967546 - 4967446
Alignment:
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4967546 ttttcaatgcaactttaattttgtcttttttttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcattccatttcttaatctgt 4967447  T
Q  299 g 299  Q
    |    
T  4967446 g 4967446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 31889807 - 31889917
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||||||| |||| |||||||||||| ||||    
T  31889807 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtgaaaacgttatattcaataattatttcattccattt 31889906  T
Q  289 cttaatctgtg 299  Q
    |||||||||||    
T  31889907 cttaatctgtg 31889917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 34919752 - 34919933
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||| ||||||| || || |||| || |||||||| ||||||| | |||        
T  34919752 ttgtttcaaaatgaatgtcactttacattcctaatataactttaatttttttcttccaacttgactctcctcaacttttctctcacaattattaat---- 34919847  T
Q  211 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
       ||| |||||||||||||||||||||||||||||||| |||||| || ||| |||||||||||||| |||  ||| |||||||||||    
T  34919848 ---taagtttgtctttttcttataaagtaagggcagtttagtaaaattgctatgtccaatgattattttatttcattccttaatctgtg 34919933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 4011790 - 4011618
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    |||||| |||||||| |||||||||||||||  |||||| ||||||||||| ||||||| |||             ||||||||||||||||||||||||    
T  4011790 ttgttttaaaatgaacgtcactttacatttccgatacaactttaatttttttcttccaacttt-------------tttctcacacaattttcaatgcaa 4011704  T
Q  211 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||| ||||||||||||||| |||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||||    
T  4011703 ctttaattttatctttttcttataaaataagggcattttagaaaaaacgttatatccaatgattatttgattccatttcttaatct 4011618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 7388335 - 7388150
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    |||||| |||||||||||||||||| ||||  ||||||||||||||||||  ||||||  |||| ||||  || |||||||| |||||||||||||||||    
T  7388335 ttgttttaaaatgaatgtcactttatattttcaatacaattttaatttttatcttccatctttatcctcttcaacttttctctcacaattttcaatgcaa 7388236  T
Q  211 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||| ||| ||||||||||||||| ||||| || ||| |||||| | |||| || ||||||||||| |||  |||| |||||||    
T  7388235 ctttaaatttatctttttcttataaaataaggacaatttagtaaaaatattatgtctaatgattattttatttcatttattaatct 7388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 171 - 299
Target Start/End: Complemental strand, 12167696 - 12167565
Alignment:
Q  171 tttaccctccccatcttttctcacaca---attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatcc 267  Q
    ||||||||| ||| |||||||| ||||   ||||||||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||| | ||     
T  12167696 tttaccctctccaacttttctctcacacaaattttcaatgcaactttaagtttgaccttttcttataaagtaagggcagtttagtaaaagtgttttgtct 12167597  T
Q  268 aatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||||||||||||||| ||||    
T  12167596 aatgattatttcattcaatttcttaatttgtg 12167565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 31557489 - 31557295
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca-----tcttttctcacacaattttcaa 205  Q
    |||||||||||||||||||| |||||||||  ||||||| ||||||||||| ||||||| ||||   ||   |     | || |||||||||||||||||    
T  31557489 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaatttttttcttccaactttattttcaataaatactattctctcacacaattttcaa 31557390  T
Q  206 tgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||| ||||||||||||||||||||| |||||  ||||  ||||||| ||||||  |||||||||||||||| |||||||||| ||||    
T  31557389 tgcaactttaagtttgtctttttcttataaagtaaagggttgtttactaaaagtattatatttaatgattatttcattctatttcttaatatgtg 31557295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 33693737 - 33693911
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca--tcttttctcacacaattttcaat 206  Q
    |||| ||| ||||| ||||||||||||||||| |||||  | ||||||||||| |||||||||||||| ||| ||  | |||||||||||||||||||||    
T  33693737 atttattttaaaataaatgtcactttacatttttaatatcactttaatttttttcttccaattttaccttcctcaacttttttctcacacaattttcaat 33693836  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||||||  || |  |||| ||||||| ||||||||| || ||||||||||||  || |||||||||||||||    
T  33693837 gcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttcatt 33693911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 4751685 - 4751485
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctcc---------ccatctttt--ctcacacaa 198  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||| |||||||||          ||| |||||  |||||||||    
T  4751685 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 4751586  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||| ||||||||| ||||| |||||| ||||||  |||||  |||| ||||||||||||| || |||||||||||||||  ||| |||||| |||    
T  4751585 ttttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatatgt 4751486  T
Q  299 g 299  Q
    |    
T  4751485 g 4751485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 299
Target Start/End: Original strand, 36783361 - 36783553
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc--acacaattttcaat 206  Q
    ||||| |||||||||||||||||| ||||||| | ||||||||| |||| || ||||||||         | ||| ||||||||  ||||||||||||||    
T  36783361 aaaattaatgtcactttacatttccaatacaactctaatttttttcttctaactttacccttagtaaattctccaacttttctctcacacaattttcaat 36783460  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||| |||||||||||| ||  ||||||||||| ||| |||||| |||||| || |||||||||||||||  || ||||||||||||    
T  36783461 gcaactttaaatttgtctttttcataacaagtaagggcaatttagtaaaaatgttatgtctaatgattatttcatttcatctcttaatctgtg 36783553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 114 - 300
Target Start/End: Original strand, 16886087 - 16886268
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttc--tcacacaattttcaatgcaac 211  Q
    |||||||||||| ||| |||| |||||  ||||||| ||||||||||| ||||||| ||||||||| ||| ||||||  |||||||||||||||||||||    
T  16886087 tttcaaaatgaacgtcgctttgcattttcaatacaactttaatttttttcttccaactttaccctctccaacttttctatcacacaattttcaatgcaac 16886186  T
Q  212 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtgc 300  Q
    |||||        |||| |||||||||||||||||||| ||||| ||||||  || ||| |||||||||||  ||| ||| ||||||||    
T  16886187 tttaa-------gttttgttataaagtaagggcagtttagtaaatgtgttacgtctaataattatttcatttcattccttgatctgtgc 16886268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 4742421 - 4742221
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctcc---------ccatctttt--ctcacacaa 198  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||||  ||||||| |||||||||          ||| |||||  |||||||||    
T  4742421 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 4742322  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||| ||||||||| ||||| |||||| ||||||  |||||  |||| ||||||||||||| ||  ||||||||||||||  ||| |||||| |||    
T  4742321 ttttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttatgtctgatgattatttcatttcattccttaatatgt 4742222  T
Q  299 g 299  Q
    |    
T  4742221 g 4742221  T

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Target: chr5; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 42329700 - 42329556
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||         |  || ||||    |||||||||    
T  42329700 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatacttcaacttttctctctcacaca 42329601  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  42329600 attttcaatgcaactttaagtttgtcttattcttataaagtaagg 42329556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 299
Target Start/End: Original strand, 15400177 - 15400370
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcaca--caattttcaat 206  Q
    |||||||||||||||||||||||| ||||||| ||||||||| | ||||||| |||| ||||          | | |||||||| ||  |||||| ||||    
T  15400177 aaaatgaatgtcactttacatttccaatacaactttaattttcttcttccaactttatcctcaataaatactcaaacttttctctcatacaatttccaat 15400276  T
Q  207 gcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    | |||||||| |||  |||||||||||||||||| ||| | ||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  15400277 gaaactttaagttttcctttttcttataaagtaaagggaattttagtaaaagtgttatatctaataattatttcattcaattttttaatctgtg 15400370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 283
Target Start/End: Original strand, 39059890 - 39059987
Alignment:
Q  186 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 283  Q
    |||||||| |||||||||||||||||||||| ||||| |||||| ||||||  ||||| ||||| ||||||||||||| || ||||||||||||||||    
T  39059890 ttttctcatacaattttcaatgcaactttaagtttgtttttttcatataaaacaagggtagtttagtaaaagtgttatgtctaatgattatttcattc 39059987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 242
Target Start/End: Complemental strand, 793763 - 793616
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcac 194  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| | ||||||         |   | ||||    ||||||    
T  793763 aatttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactctaccctcaataaatacttaaacttttctctctcac 793664  T
Q  195 acaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  793663 acaattttcaatgcaactttaagtttgtcttgttcttataaagtaagg 793616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 27652384 - 27652274
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||  | ||| |||||| ||||||  |   ||| ||||| |||| ||||    
T  27652384 tctcacacaattttcaatgcaactttaaatttgtctttttcttataaagtaaggttattttagtaaaattgttatgacatttgactattttattccattt 27652285  T
Q  289 cttaatctgtg 299  Q
    |||||||||||    
T  27652284 cttaatctgtg 27652274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 189 - 278
Target Start/End: Complemental strand, 8961099 - 8961011
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattattt 278  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||||||| ||| | |||||| ||||||||||||| || |||||||||||    
T  8961099 tctcacacaattttcattgcaactttaaatttatctttttcttataaaataa-gacagtttagtaaaagtgttatgtctaatgattattt 8961011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 271
Target Start/End: Original strand, 27810345 - 27810517
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc--------ccca---tcttttctcacacaat 199  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||| ||| |||| ||||        | ||   | ||||||||||||||    
T  27810345 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactttatcctcaataaatactcaaacttttttctcacacaat 27810444  T
Q  200 tttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 271  Q
    ||||||| ||||||||| ||| || |||||| ||||||  || |||||||| ||||||||||||||| |||||    
T  27810445 tttcaatacaactttaaatttatcttttttcatataaaacaatggcagtttagtaaaagtgttatatgcaatg 27810517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 299
Target Start/End: Original strand, 1513072 - 1513177
Alignment:
Q  194 cacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaa 293  Q
    |||||||||||| |||||||||| ||||| ||| |||| ||||||||||| ||||||  |||||| |||| |  |||||||||||||||  |||||||||    
T  1513072 cacaattttcaaagcaactttaagtttgtttttctcttgtaaagtaagggtagtttgaaaaaagtattatgtttaatgattatttcatttcatttcttaa 1513171  T
Q  294 tctgtg 299  Q
    | ||||    
T  1513172 tttgtg 1513177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 33822566 - 33822513
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  33822566 tctcacacaattttcaatgcaactttaagtttgtcttgttcttataaagtaagg 33822513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 13066712 - 13066780
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||  |||||| |||||||||    
T  13066712 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaattttttttttccaactttaccctc 13066780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 29653668 - 29653600
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||| |||||||||||||| |||||||||| ||||||| ||||||||||| ||||||| |||||||||    
T  29653668 ttgttgcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttccaactttaccctc 29653600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 12992063 - 12992113
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  12992063 ttgtttcaaaatgaatgtcattttacatttctaatacaactttaatttttt 12992113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 32690888 - 32690835
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||| |||||||||||||||||||||||||||| ||||||| |||||||||||    
T  32690888 aatttatttcaaaatgaatgtcactttacatttcaaatacaactttaatttttt 32690835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 34171251 - 34171304
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  34171251 tctcacagaattttcaatgcaactttaagtttgtcttgttcttataaagtaagg 34171304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 4371362 - 4371430
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||||||| || | || |||||||||    
T  4371362 ttgtttcaaaatgaacgtcactttacatttccaatacaactttaatttttttctccaaactttaccctc 4371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 263
Target Start/End: Complemental strand, 33585129 - 33584964
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttct----cacaca 197  Q
    |||||| |||||||| ||||||||||||||  ||||||| ||||||||||| ||||||| |||||| ||          ||| |||||||    ||||||    
T  33585129 ttgttttaaaatgaacgtcactttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttctgtctcacaca 33585030  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||||||||||||||||| |||||||| ||| | ||||||||||  | ||| |||||| ||||||    
T  33585029 attttcaatgcaactttaagtttgtcttgttcatgtaaagtaaggttattttagtaaaattgttat 33584964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 38982299 - 38982231
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||| |||||||||||||||||| ||||| ||||||| ||||||||||| || |||| |||||||||    
T  38982299 ttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttctcccaactttaccctc 38982231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 161
Target Start/End: Complemental strand, 41845433 - 41845386
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||    
T  41845433 tttcaaaatgaatgtcactttacattttcaatacaattttaatttttt 41845386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 31889741 - 31889791
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||||||||| |||||||||||||||||| ||||||| |||||||||||    
T  31889741 ttgtttcaaaataaatgtcactttacatttccaatacaactttaatttttt 31889791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 241
Target Start/End: Original strand, 29044811 - 29044860
Alignment:
Q  192 cacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 241  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  29044811 cacacaattttcaatgcaactttaagtttatcttattcttataaagtaag 29044860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 4833787 - 4833719
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||||||||||  ||||||||||  ||| ||| ||||||||||| ||||||| |||||||||    
T  4833787 ttgtttcaaaatgaatgttgctttacattttcaatgcaactttaatttttttcttccaactttaccctc 4833719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 36296196 - 36296144
Alignment:
Q  190 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||| |||||    
T  36296196 ctcacacaattttcaatgcaactttaagtttgtcttgttcctataaattaagg 36296144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 29653577 - 29653526
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 240  Q
    |||||||||||||  ||||||||||||| |||||||| ||||||||||||||    
T  29653577 tctcacacaatttctaatgcaactttaagtttgtcttgttcttataaagtaa 29653526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 24436552 - 24436498
Alignment:
Q  242 ggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||| |||||||||||||||||||| |||||||||||||||  ||| ||||||||    
T  24436552 ggcattttggtaaaagtgttatatctaatgattatttcattttattccttaatct 24436498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 34171163 - 34171213
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||| |||||||||||||||||||||||  ||||||| |||||||||||    
T  34171163 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttt 34171213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 4371451 - 4371548
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    ||||||||||||||||||||||||||    ||||||||||||||         |||||||| ||||||||| ||| || |||||||||||||||| |||     
T  4371451 tctcacacaattttcaatgcaacttt----ttgtctttttctta---------ggcagtttagtaaaagtgctatgtctaatgattatttcattccattc 4371537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 4833694 - 4833657
Alignment:
Q  191 tcacacaattttcaatgcaactttaattttgtcttttt 228  Q
    |||||||||||||||||||||||||| |||||||||||    
T  4833694 tcacacaattttcaatgcaactttaagtttgtcttttt 4833657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 176
Target Start/End: Complemental strand, 33822653 - 33822592
Alignment:
Q  115 ttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||| | ||| ||| ||||||    
T  33822653 ttcaaaatgaatgtcactttacattttcaatacaactttaattttgttctttcaactttacc 33822592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 38982205 - 38982168
Alignment:
Q  194 cacaattttcaatgcaactttaattttgtctttttctt 231  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  38982205 cacaattttcaatgcaactttaagtttgtctttttctt 38982168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 24436617 - 24436585
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacattt 140  Q
    |||||||||||||||||||||||||||||||||    
T  24436617 aatttgtttcaaaatgaatgtcactttacattt 24436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 27658726 - 27658682
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaa 155  Q
    ||||||||||||||||||||||||||||||| |||| || |||||    
T  27658726 ttgtttcaaaatgaatgtcactttacatttccaatataactttaa 27658682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 157
Target Start/End: Complemental strand, 29051659 - 29051620
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaatt 157  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  29051659 aaaatgaatgtcactttacctttctaatacaactttaatt 29051620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 32963162 - 32963111
Alignment:
Q  110 tttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||||||||||||||  ||||||||||||| ||||||| |||| ||||||    
T  32963162 tttgtttcaaaatgaataccactttacatttccaatacaactttattttttt 32963111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 33741464 - 33741531
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct 178  Q
    ||||||||| ||||||||||||||||||||  ||| ||| ||| ||||||| |||| || ||||||||    
T  33741464 ttgtttcaatatgaatgtcactttacattttcaatgcaactttcatttttttcttcaaactttaccct 33741531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Original strand, 39059805 - 39059856
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc 162  Q
    ||||||||||||||||||  ||||||||||  ||||||| ||||||||||||    
T  39059805 ttgtttcaaaatgaatgttgctttacattttcaatacaactttaattttttc 39059856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 17674207 - 17674257
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||||||||||||||||||||||| |||  |||| || |||||||||||    
T  17674207 ttgtttcaaaatgaatgtcactttacgttttcaataaaactttaatttttt 17674257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 32690791 - 32690753
Alignment:
Q  194 cacaattttcaatgcaactttaattttgtctttttctta 232  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  32690791 cacaattttcaatgcaactttaggtttgtctttttctta 32690753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 303
Target Start/End: Original strand, 17674329 - 17674402
Alignment:
Q  230 ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtgctcc 303  Q
    ||||||||||||||||||||  ||||| |||||| |  |||||||||||||||  |||| ||||| ||| ||||    
T  17674329 ttataaagtaagggcagtttaataaaaatgttatgtttaatgattatttcatttcattttttaatatgtactcc 17674402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 28640088 - 28640149
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||| |||||||||||||||||  ||| ||| ||||||||||| || |||| |||||||||    
T  28640088 aaaataaatgtcactttacattttcaattcaactttaatttttttctcccaactttaccctc 28640149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 32963066 - 32963022
Alignment:
Q  195 acaattttcaatgcaactttaattttgtctttttcttataaagtaa 240  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  32963066 acaatttccaatgcaa-tttaagtttgtctttttcttataaagtaa 32963022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 33741556 - 33741597
Alignment:
Q  192 cacacaattttcaatgcaactttaattttgtctttttcttat 233  Q
    |||||||||| |||||||||||||| ||| ||||||||||||    
T  33741556 cacacaatttccaatgcaactttaagtttatctttttcttat 33741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 282
Target Start/End: Complemental strand, 8755651 - 8755591
Alignment:
Q  222 tctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||||||||||||  |||| ||||||  |||||||||||| ||  ||||||||||||||    
T  8755651 tctttttcttataaaaaaaggacagtttaataaaagtgttatgtctgatgattatttcatt 8755591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 6e-71; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 26965653 - 26965463
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaatgc 208  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| ||||||||| ||| ||||||||  ||||||||||||||||    
T  26965653 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctctccaacttttctctcacacaattttcaatgc 26965554  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  26965553 aactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcattttatttcttaatctgtg 26965463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 112 - 299
Target Start/End: Complemental strand, 27483337 - 27483148
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacaca--attttcaatgca 209  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||| ||| |||||||| ||||  ||||||||||||    
T  27483337 tgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctctccaacttttctctcacataattttcaatgca 27483238  T
Q  210 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||||||| || |||||||||||||||  ||| |||||| ||||    
T  27483237 actttaagtttgtctttttcttataaagtaagggaaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatttgtg 27483148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 2568157 - 2567970
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca--tcttttctcacacaattttcaatgc 208  Q
    |||||| ||||||||||| |||||||||||  ||||||| ||||||||||| ||||||| ||||||||  | |  | || ||||||||||||||||||||    
T  2568157 ttgttttaaaatgaatgttactttacattttcaatacaactttaatttttttcttccaactttaccctttctaatttttctctcacacaattttcaatgc 2568058  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||| ||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  2568057 aactttaagtttgtctttttcttataaagtaaggacatttttgtaaaagtgttatatctaatgattatttcattcaattccttaatct 2567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 104 - 299
Target Start/End: Original strand, 19552532 - 19552730
Alignment:
Q  104 aaacaatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacaca--attt 201  Q
    ||||||||||||| |||||||||||||||||||||||  ||||||| ||||| ||||| ||||||| ||||||||| | | |||||||| ||||  ||||    
T  19552532 aaacaatttgttttaaaatgaatgtcactttacattttcaatacaactttaaattttttcttccaactttaccctctctaacttttctctcacagaattt 19552631  T
Q  202 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggt-aaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||| || ||||  ||||||||||||||||||||||||  |||||||||| ||||    
T  19552632 tcaatgcaactttaattttgtatttttcttataaagtaaggacagtttagtaaaaaacgttatatccaatgattatttcatttcatttcttaatttgtg 19552730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 111 - 296
Target Start/End: Complemental strand, 37225749 - 37225553
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acacaat 199  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||| ||||||| |||||||||          | | ||||||||  |||||||    
T  37225749 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattcttttcttccaactttaccctcaataaatacgctaacttttctctcacacaat 37225650  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||  ||||||||||||    
T  37225649 tttcaatgcaactttaattttgtctttttcttataaagtaaggacagtttagtaaaagtattatatccaatgattatttcattgtatttcttaatct 37225553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 34059872 - 34060063
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcac--acaattttcaa 205  Q
    ||||||||| ||||||||||||| |||||||||  ||||||| ||||||||||| ||| ||| ||||||||| ||| |||||||| |  |||||||||||    
T  34059872 aatttgttttaaaatgaatgtcattttacattttcaatacaactttaatttttttctttcaactttaccctctccaacttttctctcgcacaattttcaa 34059971  T
Q  206 tgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||||||  ||||||||||||||||||||||| ||||| ||||||   ||||||||||| |||||||||||| |||||||||||||||    
T  34059972 tgcaactttaatt--gtctttttcttataaagtaagggtagtttagtaaaaactttatatccaattattatttcattccatttcttaatctgtg 34060063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 36771724 - 36771531
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaa 205  Q
    ||||||||| |||||||||||||||||||||||  ||||||| ||||||||||| ||| ||| |||| |||| ||| ||||||||  |||||||||||||    
T  36771724 aatttgttttaaaatgaatgtcactttacatttacaatacaactttaattttttactttcaactttatcctctccaacttttctctcacacaattttcaa 36771625  T
Q  206 tgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| |||||| | |||| || ||| |||||||||||  |||||||||| ||||    
T  36771624 tgcaactttaagtttgtctttttcttataaaataagagcagtttagtaaaaatattatgtctaataattatttcattatatttcttaatatgtg 36771531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 108 - 296
Target Start/End: Complemental strand, 1341077 - 1340887
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaa 205  Q
    ||||| ||| |||||||||||||||||||||||  ||||||| ||||||||||| |||||||  |||||||| ||| ||||||||  |||||||||||||    
T  1341077 aatttattttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacgttaccctctccaacttttctctcacacaattttcaa 1340978  T
Q  206 tgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||||||| ||||||||||||||||||||||| | || ||| | ||||||||||| || ||| |||||||||||| |||  |||||||    
T  1340977 tgcaactttaagtttgtctttttcttataaagtaaagacactttagaaaaagtgttatgtctaattattatttcattccattctttaatct 1340887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 25061703 - 25061891
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcaca--caattttcaatgc 208  Q
    |||||| |||||||||| ||||||||||||| ||||||| ||||||||||| || |||| ||||| ||| ||| |||||||| ||  |||||||||||||    
T  25061703 ttgttttaaaatgaatgccactttacatttccaatacaactttaatttttttctcccaactttactctctccaacttttctctcatacaattttcaatgc 25061802  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| |||||  ||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||  ||| |||||| ||||    
T  25061803 aactttaagtttgt--ttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtg 25061891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 44648555 - 44648365
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatctttt--ctcacacaattttcaatgc 208  Q
    |||||| |||||||||||||||||||||||| ||||||| |||| ||||||  |||||| ||||| ||| ||| |||||  ||||||||||||||||| |    
T  44648555 ttgttttaaaatgaatgtcactttacatttccaatacaactttatttttttt-ttccaactttactctctccaacttttttctcacacaattttcaattc 44648457  T
Q  209 aactttaattttgtcttttt-cttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| ||||||||||| || ||||||||| |||||||| ||||||||||||| || |||||||||||||||  ||| |||||||||||    
T  44648456 aactttaagtttgtcttttttctcataaagtaaaggcagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctgtg 44648365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 790092 - 790270
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatg 207  Q
    ||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| |||| || ||| |             ||||||||||||| |||||    
T  790092 aatttgtttcaaaattaatgtcactttacatttccaatacaactttaatttttttcttcaaacttttc-------------tctcacacaatttccaatg 790178  T
Q  208 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||  |||||||||| ||||    
T  790179 caactttaattttgactttttcttataaagtaagggcagtttagtaaaagcgttatattcaatgattatttcattacatttcttaatatgtg 790270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 105 - 299
Target Start/End: Complemental strand, 31291124 - 31290929
Alignment:
Q  105 aacaatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttt--tctcacacaatttt 202  Q
    |||||||||| | ||||||||| |||||||||||||||||||||| ||||||||||| ||| ||| ||||  |||  || ||||  ||||||||||||||    
T  31291124 aacaatttgtcttaaaatgaatatcactttacatttctaatacaactttaatttttttctttcaactttatgctcttcaacttttctctcacacaatttt 31291025  T
Q  203 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    || ||||||||||| ||| ||||||||| ||||| ||| |||||||| ||||||||||||| || ||| |||||||||||  ||| |||||||||||    
T  31291024 cattgcaactttaagttt-tctttttctaataaaataaaggcagtttagtaaaagtgttatgtctaataattatttcatttcattccttaatctgtg 31290929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 647748 - 647547
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acac 196  Q
    ||||||||| ||||||| | ||| |||||||||  ||||||| ||||||||||| ||||||| |||||||||          | | ||||||||  |||     
T  647748 aatttgtttaaaaatga-tatcattttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctcttacag 647650  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||  ||||||||||||    
T  647649 aattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaactgttatatctaatgattatttcatttcatttcttaatct 647550  T
Q  297 gtg 299  Q
    |||    
T  647549 gtg 647547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 152 - 294
Target Start/End: Original strand, 40048925 - 40049067
Alignment:
Q  152 ttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttgg 251  Q
    |||||||||| ||||||  ||||||||| ||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||| |||      
T  40048925 ttaatttttttcttccagctttaccctctccaacttttctctcataattttcaatgcaactttaaatttgtctttttcttataaagtaaaggcaatttaa 40049024  T
Q  252 taaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    |||||||||||| || |||||||||||||||| ||| ||||||    
T  40049025 taaaagtgttatgtctaatgattatttcattccattccttaat 40049067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 46363165 - 46362965
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctcc---------ccatcttttctc--acacaa 198  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||  ||||||| |||||||||          ||| ||||||||  ||||||    
T  46363165 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcacacaa 46363066  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||| |||||| |||||| |||||  || |||||||||||||||||||| |||||| |||    
T  46363065 tttacaatgcaactttaaatttgtatttttcttataaagtaaggacagtttagtaaaaatgttaggtctaatgattatttcattcaattccttaatatgt 46362966  T
Q  299 g 299  Q
    |    
T  46362965 g 46362965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 116 - 296
Target Start/End: Original strand, 35239390 - 35239556
Alignment:
Q  116 tcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaacttta 215  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| |             |||||||||||||||| ||||||||||    
T  35239390 tcaaaatgaatgtcactttacatttctaatacaactttaattttttc-ttccaacttttc-------------tctcacacaattttcactgcaacttta 35239475  T
Q  216 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    | ||||||||||||||||||||||||| |||||| |||||| ||||||  | ||||||||||| ||||||||| |||||||    
T  35239476 agtttgtctttttcttataaagtaaggacagtttagtaaaaatgttatgcctaatgattattttattcaattttttaatct 35239556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 44854314 - 44854508
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcaca---caa 198  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||| |||||| ||||||||||||||||          ||| |||||||| ||   |||    
T  44854314 ttgtttcaaaatgaacgtcactttacattttcaatacaattttaactttttc-ttccaattttaccctcaataaatactccaacttttctctcagtacaa 44854412  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||  | || ||||||||||||||||||||  |||||||    
T  44854413 ttttcaatgcaactttaagtttgtatttttcttataaagtaagggcagtttagtaaaagtgt--tgtctaatgattatttcattcaattcattaatct 44854508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 112 - 299
Target Start/End: Original strand, 38457460 - 38457658
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acacaatt 200  Q
    ||||||||||||||| ||| |||||||||  ||||||| ||||||||||| | ||||| |||||||||          ||| ||||||||  ||||||||    
T  38457460 tgtttcaaaatgaatatcattttacattttcaatacaactttaatttttttcatccaactttaccctcaataaatactccaacttttctctcacacaatt 38457559  T
Q  201 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||| ||||| ||| ||||||||| ||||||||| |||||||| ||||||||||||| |  ||||||||||||||||||||||||||| ||||    
T  38457560 ttcaatgcaattttaagtttatctttttctaataaagtaatggcagtttagtaaaagtgttatgtgtaatgattatttcattcaatttcttaatttgtg 38457658  T

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Target: chr3; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 112 - 294
Target Start/End: Original strand, 53716029 - 53716196
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaac 211  Q
    ||||| ||||||||||| |||||||||||| ||||||| ||||||||||| ||||||| ||| |             ||||||||| |||||||||||||    
T  53716029 tgttttaaaatgaatgttactttacatttccaatacaactttaatttttttcttccaacttttc-------------tctcacacagttttcaatgcaac 53716115  T
Q  212 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    |||||||  ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||  ||||||||||    
T  53716116 tttaatt--gtctttttcttataaagtaagagcagtttagtaaaagcgttatatccaatgattatttcatttcatttcttaat 53716196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 189 - 300
Target Start/End: Complemental strand, 2662557 - 2662446
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||| || |||||||||||||||  |||     
T  2662557 tctcacacaattttcaatgcaactttaaatttgtctttttcttataaaataagggcaatttagtaaaagtgttatgtctaatgattatttcatttgattc 2662458  T
Q  289 cttaatctgtgc 300  Q
     |||||||||||    
T  2662457 tttaatctgtgc 2662446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 43580471 - 43580677
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccct---------ccccatctttt---ctcac 194  Q
    ||||||||||||||| |||||||||||||||||  ||||||| |||||||||||  ||||||| ||||||||         | ||| |||||   |||||    
T  43580471 aatttgtttcaaaataaatgtcactttacattttcaatacaactttaattttttttcttccaactttacccttaataaatactccaactttttttctcac 43580570  T
Q  195 acaattttcaatgcaactttaattttgtctttttc--ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 292  Q
    |||||||||||||||||||||| ||||||||||||   ||||||  ||||||||||| |||||| ||||||||  |||||||||||||||| ||| ||||    
T  43580571 acaattttcaatgcaactttaaatttgtctttttcatatataaaacaagggcagtttagtaaaaatgttatatgtaatgattatttcattctattcctta 43580670  T
Q  293 atctgtg 299  Q
    |||||||    
T  43580671 atctgtg 43580677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 83295 - 83493
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcacac--aat 199  Q
    |||||||||||||||||||| |||||||||  ||||||| |||||||||||| |||||| |||||||||          | | |||||||| |||  |||    
T  83295 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaattttttc-ttccaactttaccctcattaaatactctaacttttctctcacgcaat 83393  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | || |||||||| ||||||  ||| |||||| ||||    
T  83394 tttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttgtgtctaatgattaattcatttcattccttaatttgtg 83493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 282
Target Start/End: Complemental strand, 4476507 - 4476334
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca--tcttttctcacacaattttcaat 206  Q
    |||| ||| ||||| ||||||||||||||||| |||||  ||||||||||||| ||| |||||||||| ||| ||  | |||||||||||||||||||||    
T  4476507 atttattttaaaataaatgtcactttacatttttaatatcattttaatttttttctttcaattttaccttcctcaacttttttctcacacaattttcaat 4476408  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||||||  || | | ||| ||||||| ||||||||| || ||||||||||||  || |||||||||||||||    
T  4476407 gcaactttaagcttat-tattttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttcatt 4476334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 42740229 - 42740403
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca--tcttttctcacacaattttcaat 206  Q
    |||| ||| ||||| |||||||||||| |||| |||||  | ||||||||||| |||||||||||||| ||| ||  | |||||||||||||||||||||    
T  42740229 atttattttaaaataaatgtcactttatatttttaatatcactttaatttttttcttccaattttaccttcctcaacttttttctcacacaattttcaat 42740328  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||||||  || |  |||| ||||||| ||||||||| || ||||||||||||  || |||||||||||||||    
T  42740329 gcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttcatt 42740403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 43599978 - 43599855
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttt--tctcacacaattttcaa 205  Q
    ||||||||||||||||||||||  ||||||||| | |||||| ||||||||||| |||  || ||||||||| ||| ||||  |||||||||||||| ||    
T  43599978 aatttgtttcaaaatgaatgtcgttttacatttttcatacaactttaatttttttcttttaactttaccctctccaacttttctctcacacaatttttaa 43599879  T
Q  206 tgcaactttaattttgtctttttc 229  Q
    ||||||||||| ||||||||||||    
T  43599878 tgcaactttaagtttgtctttttc 43599855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 263
Target Start/End: Complemental strand, 54933359 - 54933194
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||| ||||||||         | ||| ||||    |||||||||    
T  54933359 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 54933260  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||  | ||| |||||| ||||||    
T  54933259 attttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttat 54933194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 298
Target Start/End: Complemental strand, 38165712 - 38165617
Alignment:
Q  203 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |  |||||||||||||||  ||| ||||||||||    
T  38165712 caatgcaactttaagtttgtctttttcttataaagtaaggacagtttagtaaaagtgttatgtttaatgattatttcattacattccttaatctgt 38165617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 186 - 278
Target Start/End: Original strand, 41287163 - 41287255
Alignment:
Q  186 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattattt 278  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| |||||| |||| ||||||| ||||||||||||| || |||||||||||    
T  41287163 ttttctcacacaattttcaatgcaactttaagtttgagtttttcatataaaataagtgcagtttagtaaaagtgttatgtctaatgattattt 41287255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 294
Target Start/End: Original strand, 4391900 - 4392088
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt--tctcacac 196  Q
    ||||||||| ||||||||| ||||||||||||| || ||||||||||||||||| || |||| ||||||||         | ||| ||||  |||| |||    
T  4391900 aatttgttttaaaatgaatatcactttacatttttagtacaattttaatttttttctcccaactttaccctcaataaatactccaacttttctctcgcac 4391999  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    |||||||||||||||||||| ||||||||||||||         ||||||||| ||||||||||||| || ||| |||||||||||  ||||||||||    
T  4392000 aattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttatgtctaataattatttcatttcatttcttaat 4392088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 27039415 - 27039524
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatt 287  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| || ||| |||||||||||||||  ||||||  |||||||| |||    
T  27039415 tctcacacaattttcaatgcaactttaaatttgtctttttttttataaagtaaggacactttagtaaaagtgttatatttaatgat--tttcattccatt 27039512  T
Q  288 tcttaatctgtg 299  Q
     |||||| ||||    
T  27039513 acttaatatgtg 27039524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 2988763 - 2988620
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||         | | | ||||    |||| ||||    
T  2988763 ttgtttcaaaatgaatgtcactttacatttccaatacaa-tttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcgcaca 2988665  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  2988664 attttcaatgcaactttaagtttgtcttgttcttataaagtaagg 2988620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 5244673 - 5244782
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||  ||||||||||||||||||| ||||| |||||||||||| |||| |  | |||  |||||||||||| || |||||||||||||||||||||    
T  5244673 tctcacattattttcaatgcaactttaagtttgtttttttcttataa-gtaaagagactttaataaaagtgttatgtctaatgattatttcattcaattt 5244771  T
Q  289 cttaatctgtg 299  Q
    |||||| ||||    
T  5244772 cttaatatgtg 5244782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 43736922 - 43736842
Alignment:
Q  201 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||||||||||||| ||| ||||||||||||||| |||| | ||||| |||||||||||||||| |||||||||||||||    
T  43736922 ttcaatgcaactttaagttt-tctttttcttataaaataagagtagtttagtaaaagtgttatatctaatgattatttcatt 43736842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 282
Target Start/End: Complemental strand, 9167799 - 9167661
Alignment:
Q  143 aatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||| ||||||||||| ||||| | |||||| ||  || |||||||  ||| ||||||||||||| ||||| ||| | ||||| | |||||||||||    
T  9167799 aatacaactttaatttttttcttcctactttaccatcttcaacttttctttcacgattttcaatgcaattttaagttttttttttt-taataaagtaagg 9167701  T
Q  243 gcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||| |||||| |||||| |  |||||||||||||||    
T  9167700 gcagtttagtaaaaatgttatgtgaaatgattatttcatt 9167661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 20512559 - 20512449
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| || |||  |   ||| ||||| |||||||||    
T  20512559 tctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgctatgacatttgactattttattcaattt 20512460  T
Q  289 cttaatctgtg 299  Q
    |||||||||||    
T  20512459 cttaatctgtg 20512449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 108 - 296
Target Start/End: Original strand, 22414751 - 22414948
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctcc---------ccatcttttctcacaca 197  Q
    ||||| ||||||||||||||||||||||||||| ||||| || |||||||||||  ||||||| |||||| ||          | | ||| ||| |||||    
T  22414751 aatttatttcaaaatgaatgtcactttacatttttaatataactttaattttttttcttccaactttaccttcaataaatactcaaccttctcttacaca 22414850  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||||||||||||||| ||| || |||||||||||| ||  || |||||  ||||||| |||| || ||| |||||||||||  ||||||||||||    
T  22414851 attttcaatgcaactttaagtttctc-ttttcttataaactataggtagtttaataaaagtattatgtctaataattatttcatttcatttcttaatct 22414948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 54261505 - 54261615
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||  |   ||| || || |||||||||    
T  54261505 tctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaattt 54261604  T
Q  289 cttaatctgtg 299  Q
    |||||||||||    
T  54261605 cttaatctgtg 54261615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 13485966 - 13485909
Alignment:
Q  104 aaacaatttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||    
T  13485966 aaacaatttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttt 13485909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 263
Target Start/End: Complemental strand, 25722612 - 25722450
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc----acacaatt 200  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||| ||||  | ||||||||         | ||| ||||||||    ||||||||    
T  25722612 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttcatactttaccctaaataaatactccaacttttctctctcacacaatt 25722513  T
Q  201 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    |||||||||||||||| |||||||| ||||| ||||||||||  | ||| |||||| ||||||    
T  25722512 ttcaatgcaactttaagtttgtcttattcttgtaaagtaaggttattttagtaaaattgttat 25722450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 51381814 - 51381867
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  51381814 tctcacacaattttcaatgcaactttaagtttgtctttttattataaagtaagg 51381867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 27027732 - 27027933
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc--acacaat 199  Q
    |||||||||||| ||||||| |||||||||| ||||||| ||||||||||| |||| || |||| |||         | ||| ||||||||  |||||||    
T  27027732 ttgtttcaaaattaatgtcaatttacatttccaatacaaatttaatttttttcttcaaactttatccttaataaatactccaacttttctctcacacaat 27027831  T
Q  200 tttcaatgcaactttaattttgtc----tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 295  Q
    ||||||||||||||||| ||||||    ||||| ||||||||||||| || |||  |||||||||||| |  ||||||  |||||||| ||| ||||||     
T  27027832 tttcaatgcaactttaaatttgtcttttttttttttataaagtaaggacactttattaaaagtgttatgtttaatgat--tttcattccattacttaata 27027929  T
Q  296 tgtg 299  Q
    ||||    
T  27027930 tgtg 27027933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 32304062 - 32303991
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||  ||||||||||||||||||||||  ||||||| ||||||||||| ||||||| |||||||||    
T  32304062 aatttgttttgaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 32303991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 43169333 - 43169477
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||| |||| || |||||| |         | | | ||||    |||||||||    
T  43169333 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttctaactttaccttcaataaatactcaaacttttatctctcacaca 43169432  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||    
T  43169433 attttcaatacaactttaagtttgtcttattcttataaagtaagg 43169477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 292
Target Start/End: Complemental strand, 43600341 - 43600152
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc--------cccatcttttctc--acacaattttc 203  Q
    ||||||||| ||||| |||||||||||  |||||||||||||||||||| |||||| |||||||||        | |  ||||||||  ||||||||| |    
T  43600341 tttcaaaataaatgttactttacattttcaatacaattttaattttttc-ttccaactttaccctcaataaatactctacttttctctcacacaatttcc 43600243  T
Q  204 aatgcaactttaattttgtc-tttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 292  Q
    |||  |||||||| |||||| ||||| ||||||||| ||||| ||||| |||||| ||||||||| ||| ||||||| |||  ||||||||    
T  43600242 aatataactttaaatttgtcattttttttataaagtaaagggaagtttagtaaaaatgttatatctaataattattttatttcatttctta 43600152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 43687946 - 43687872
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  43687946 tctcacacaattttcaatgaaactttaaatttgtcttgttcttataaagtaaggttattttagtaaaattgttat 43687872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 294
Target Start/End: Original strand, 45095559 - 45095723
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaactttaat 217  Q
    |||||||||||||||||||||||  ||||||| |||||||||||  |||||| ||||||||| ||| |||||||| ||            || ||||||     
T  45095559 aaaatgaatgtcactttacattttcaatacaactttaatttttt--ttccaactttaccctctccaacttttctctca------------cacctttaag 45095644  T
Q  218 tttgtctttttcttataaagtaa-gggcagtttggtaaaa-gtgttatatccaatgattatttcattcaatttcttaat 294  Q
    |||||| |||||||||||||||| ||||| ||| |||||| ||||||| |  |||||||||||||||| ||| ||||||    
T  45095645 tttgtccttttcttataaagtaaggggcattttagtaaaatgtgttatgtttaatgattatttcattccattccttaat 45095723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 53560754 - 53560807
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  53560754 tctcacataattttcaatgcaactttaagattgtctttttcttataaagtaagg 53560807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 296
Target Start/End: Original strand, 22731035 - 22731126
Alignment:
Q  204 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||| |||||||| ||||||||||||||||||| | ||| |||||| |||||| |||||| |  |||||||||||||||  ||||||||||||    
T  22731035 aatgtaactttaagtttgtctttttcttataaattgagg-cagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatct 22731126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 44645340 - 44645481
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc----acacaatt 200  Q
    |||||||||||||||| |||||||||||  || ||| ||||||||||| ||||||| ||||||||         | ||| ||||||||    ||| ||||    
T  44645340 tttcaaaatgaatgtcgctttacatttcccatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcttacataatt 44645439  T
Q  201 ttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||| ||| |||||||| ||||||||||||    
T  44645440 ttcaatgcaactttaagtttatctttttcatataaagtaagg 44645481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 3000841 - 3000883
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttctt 231  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  3000841 tctcacacaattttcaatgcaactttaaatttgtctttttctt 3000883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 22730924 - 22730989
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||||| ||| ||||||||| |||||||||| ||||||| ||||||||||| ||||||| ||||||    
T  22730924 ttgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 22730989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 54261414 - 54261482
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||||||| ||| ||||||||||  ||| ||| ||||||||||| ||||||| |||||||||    
T  54261414 ttgtttcaaaatgaacgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctc 54261482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 42007119 - 42007072
Alignment:
Q  195 acaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||||    
T  42007119 acaattttcaatgcaactttaagtttgtcttgttcttataaaataagg 42007072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 16240664 - 16240706
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttctt 231  Q
    |||| ||||||||||||||||||||||| ||||||||||||||    
T  16240664 tctcgcacaattttcaatgcaactttaagtttgtctttttctt 16240706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 5244582 - 5244635
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||||| |||||||||||||| |||||||| ||||| || |||||||||||    
T  5244582 aatttgttttaaaatgaatgtcaccttacatttttaatataactttaatttttt 5244635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 32303964 - 32303915
Alignment:
Q  193 acacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||| || |||||| |||| ||||||||||||||||||||    
T  32303964 acacaattttcaatacagctttaagtttgcctttttcttataaagtaagg 32303915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 178
Target Start/End: Complemental strand, 35099518 - 35099453
Alignment:
Q  113 gtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct 178  Q
    |||||| ||| ||||||| |||||||||| ||||||| ||||||||||| || |||| ||||||||    
T  35099518 gtttcataataaatgtcattttacatttccaatacaactttaatttttttctcccaactttaccct 35099453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 36310404 - 36310339
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||||||||||| ||||||| |||||||||| ||||||| |||| |||||| || |||| ||||||    
T  36310404 ttgtttcaaaataaatgtcattttacatttccaatacaactttattttttttctcccaactttacc 36310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 36541581 - 36541634
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||| |||||||||||| |||||||| ||| ||||||| ||||    
T  36541581 tctcacacaattttcgatgcaactttaagtttgtcttgttcctataaagcaagg 36541634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 43688040 - 43687969
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatt---ttttccttccaattttaccctc 179  Q
    ||||| |||||| |||||||||||||||||| ||||||| |||||||   |||| ||||||| |||||||||    
T  43688040 ttgttccaaaataaatgtcactttacatttccaatacaactttaattttttttttcttccaactttaccctc 43687969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 51381720 - 51381789
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaa-ttttttccttccaattttaccctc 179  Q
    |||||||||||| |||||||||||||||||  ||||||| ||||| |||||| |||| || |||||||||    
T  51381720 ttgtttcaaaataaatgtcactttacatttacaatacaactttaattttttttcttctaactttaccctc 51381789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 50420258 - 50420321
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttac 175  Q
    |||||| ||||| ||||||| ||||||||| |||||||| ||||||||||| ||||||| |||||    
T  50420258 ttgtttaaaaataaatgtcattttacatttttaatacaactttaatttttt-cttccaactttac 50420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 282
Target Start/End: Complemental strand, 43599571 - 43599520
Alignment:
Q  231 tataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||| |||||||||||| |||||||| |||| || |||||||||||||||    
T  43599571 tataaaataagggcagtttagtaaaagtattatgtctaatgattatttcatt 43599520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 49470788 - 49470851
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaatttta 174  Q
    |||||||||||||||||||  |||||||||  ||||||| ||||||||||| | ||||| ||||    
T  49470788 ttgtttcaaaatgaatgtcgttttacattttcaatacaactttaatttttttcatccaaattta 49470851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 15514872 - 15514830
Alignment:
Q  119 aaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||| |||||||||||||||||| ||||||| |||||||||||    
T  15514872 aaataaatgtcactttacatttccaatacaactttaatttttt 15514830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 20512651 - 20512585
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaa-ttttaattttttccttccaattttacc 176  Q
    ||||||||||||||||||| ||||||||||  ||| ||| ||| |||||||| ||||||| ||||||    
T  20512651 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaaatttttttcttccaactttacc 20512585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 231
Target Start/End: Complemental strand, 35099431 - 35099389
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttctt 231  Q
    |||| ||||||||||||||||| ||||| ||||||||||||||    
T  35099431 tctcgcacaattttcaatgcaattttaagtttgtctttttctt 35099389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 36541493 - 36541558
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||||||||  |||||||||  ||||||| |||| ||| || ||||||| |||||||||    
T  36541493 tttcaaaatgaatgtcgttttacattttcaatacaactttactttatttcttccaactttaccctc 36541558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 41287082 - 41287145
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaa--ttttttccttccaattttaccctc 179  Q
    |||||| ||||||||||||||||| ||||||| |||||  |||||| ||||||| ||| |||||    
T  41287082 aaaatggatgtcactttacatttccaatacaactttaatttttttttcttccaacttttccctc 41287145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 42857102 - 42857046
Alignment:
Q  243 gcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||| |||||| |||||| || |||||||||||||||  ||| |||||||||||    
T  42857102 gcagtttagtaaaaatgttatgtctaatgattatttcatttgattccttaatctgtg 42857046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 42857212 - 42857148
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    ||||| |||| |||||||||||||||||||  ||||||  |||||||||| |||| || ||||||    
T  42857212 tgttttaaaaggaatgtcactttacatttcccatacaacattaatttttttcttctaactttacc 42857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 44676216 - 44676288
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc 180  Q
    |||||||||||||||||||||||||||   |||| ||| ||||  ||| |||||| || ||||| ||||||||    
T  44676216 aatttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttcttttcaattgtaccctcc 44676288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 179
Target Start/End: Complemental strand, 52222892 - 52222831
Alignment:
Q  116 tcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||||||  ||  |||||| ||||||| ||||||||||| ||||||| |||||||||    
T  52222892 tcaaaatgaatgtcgttt--catttccaatacaactttaatttttttcttccaactttaccctc 52222831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 52732594 - 52732782
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctccccatcttttctc--acacaattttcaatg 207  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||||||  ||||||| ||||||||||||| ||||||||  |||||||||||||||    
T  52732594 ttgttttaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctccccaacttttctctcacacaattttcaatg 52732693  T
Q  208 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||    
T  52732694 caactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtgttatatccaatgattatttcattccattttttaatct 52732782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 109 - 299
Target Start/End: Complemental strand, 43421274 - 43421082
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaat 206  Q
    ||||||||||||||||| |||||||||||||||  |||||| ||||||||||| ||||||| ||||||||| |||  |||||||  ||||||| ||||||    
T  43421274 atttgtttcaaaatgaaggtcactttacatttcccatacaactttaatttttttcttccaactttaccctctccaggttttctctcacacaatattcaat 43421175  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  43421174 gcaactttaattttgtctttttcttataaagtaagagcaatttagtaaaagtattatatccaatgattatttcattccatttcttaatttgtg 43421082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 108 - 294
Target Start/End: Original strand, 51930592 - 51930765
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatg 207  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||| ||| |             |||||||||||||||||||    
T  51930592 aatttgtttcaaaatgaatgtcgctttacatttccaatacaattttaatttttttcttccaacttttc-------------tctcacacaattttcaatg 51930678  T
Q  208 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||| ||||| ||||    
T  51930679 caactttaattttgtcattttcttataaagtaagggcagtttagtaaaagcgttatatccaattattatttcattccatttcataat 51930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 143 - 297
Target Start/End: Original strand, 34360041 - 34360197
Alignment:
Q  143 aatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaa 240  Q
    ||||||| |||| |||||| ||||||| ||||||||| ||| ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34360041 aatacaactttattttttttcttccaactttaccctctccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaa 34360140  T
Q  241 gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 297  Q
    ||||||||| |||||||||||||||| |||||||||||||||  ||| |||||||||    
T  34360141 gggcagtttagtaaaagtgttatatctaatgattatttcatttcattccttaatctg 34360197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 111 - 282
Target Start/End: Complemental strand, 15501302 - 15501129
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaatgc 208  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |||| |||  || ||||||||  |||||||||| |||||    
T  15501302 ttgtttgaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacattactctcttcaacttttctctcacacaatttttaatgc 15501203  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||| |||||| || |||||||||||||||    
T  15501202 aactttaagtttgtatttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattatttcatt 15501129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 21045148 - 21045327
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctccccatcttttctcacacaattttcaat 206  Q
    |||||||||||||||||||||||||||||||||  ||||||| |||||||||||  ||||||| ||| |             ||||||||||||||||||    
T  21045148 aatttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaat 21045234  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||| ||| |||||||||||    
T  21045235 gcaactttaattttgtctttttcttataaagtaagggcagtttaataaaagccttatatccaatgattatttcattccattccttaatctgtg 21045327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 118 - 299
Target Start/End: Original strand, 54512034 - 54512217
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaatgcaacttta 215  Q
    ||||||||| ||||||||||||| ||||| || ||||||||||  ||||||| |||| |||| ||| ||||||||  ||||||| |||||||||||||||    
T  54512034 aaaatgaatatcactttacatttttaatataactttaatttttatcttccaactttatcctctccaacttttctctcacacaatgttcaatgcaacttta 54512133  T
Q  216 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||| |||||||||||  |||||||||| ||||    
T  54512134 attttgtcattttcttataaagtaagagcagtttagtaaaaacgttatatccaattattatttcatttcatttcttaatatgtg 54512217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 44855237 - 44855438
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaatt--ttaccctcc---------ccatcttttctc--acaca 197  Q
    ||||||| |||| |||||||||||||||||| ||||||| ||||| ||||  |||||||||  ||||||||          ||| ||||||||  |||||    
T  44855237 ttgtttcgaaataaatgtcactttacatttccaatacaactttaagttttctcttccaattctttaccctcaataaataatccaacttttctctcacaca 44855336  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 297  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| |||||||||| ||    
T  44855337 attttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttatattcaatgattatttcattctatttcttaatttg 44855436  T
Q  298 tg 299  Q
    ||    
T  44855437 tg 44855438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 32141119 - 32140944
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||||||| ||||||| ||| |             ||||||||||||||||||||||    
T  32141119 ttgtttcaaaatgaatgccactttacatttccaatacaactttaatttttttcttccaacttttc-------------tctcacacaattttcaatgcaa 32141033  T
Q  211 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
     ||||  ||||||||||  |||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  32141032 atttatgtttgtcttttgtttataaagtaggggcagtttagtaaaagtgttatgtctaatgattatttcattcaatttcttaatctgtg 32140944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 36805600 - 36805408
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccc--catctttt--ctcacacaattttcaat 206  Q
    |||||| |||||| |||| | |||||||||  ||||||| ||||||||||| ||||||| |||| |||| |  || |||||  |||||||||||||||||    
T  36805600 ttgttttaaaatgtatgttattttacatttgcaatacaactttaatttttttcttccaactttaacctcactccaacttttttctcacacaattttcaat 36805501  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
     ||||||||| |||||||||||| |||||| ||||| |||||| ||||||||||||| || |||||||||||||||  ||| |||||||||||    
T  36805500 acaactttaagtttgtctttttcatataaactaaggacagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctgtg 36805408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 111 - 292
Target Start/End: Original strand, 50072276 - 50072438
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| |||             ||||||||||||||||||||||||    
T  50072276 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacttt-------------tttctcacacaattttcaatgcaa 50072362  T
Q  211 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 292  Q
    |||||||||||||||      |||||||||||||||||| ||||||  ||||||||||||||||||||||||| ||||||||    
T  50072363 ctttaattttgtctt------ataaagtaagggcagtttagtaaaaacgttatatccaatgattatttcattccatttctta 50072438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 31817334 - 31817157
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatg 207  Q
    |||||||||||||||||||||||||||||||||| ||| ||| |||  |||||| ||||||| ||| |             |||||||||||||||||||    
T  31817334 aatttgtttcaaaatgaatgtcactttacatttccaatgcaacttt--tttttttcttccaacttttc-------------tctcacacaattttcaatg 31817250  T
Q  208 caactttaattttgtcttttt-cttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  31817249 caactttaattttgtattttttcttataaagtaagggaagtttagtaaaaacgttatatccaatgattatttcattccatttcttaatttgtg 31817157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 111 - 282
Target Start/End: Original strand, 37445655 - 37445837
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttct--cacacaat 199  Q
    |||||| ||||||||||||| ||||||||| |||||||| ||||||||||| ||||||| |||||||||          | |  ||||||  |||| |||    
T  37445655 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttcttccaactttaccctcaataaatattcaaatttttctttcacataat 37445754  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  37445755 ttttaatgcaactttaaatttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcatt 37445837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 111 - 294
Target Start/End: Original strand, 19849079 - 19849273
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acacaat 199  Q
    |||||| ||||||||| |||||||||| ||| ||||||| ||||||||||| ||||||| |||||||||          ||| ||||||||  |||||||    
T  19849079 ttgttttaaaatgaatttcactttacaattccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcacacaat 19849178  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||| ||||||||  ||| ||||||| |||  ||||||||||    
T  19849179 tttcaatgcaactttaagtttgtttttttcttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 19849273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 299
Target Start/End: Complemental strand, 56423056 - 56422957
Alignment:
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||| |||||||| |||||||||||||||||||| | |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  56423056 tttcaatgcaattttaatttcgtctttttcttataaagtaaagacagtttagtaaaagcgttatatccaatgattatttcattcgatttcttaatctgtg 56422957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 34096010 - 34096210
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttc-caattttaccctcc---------ccatcttttctc--acacaa 198  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||  ||  ||| |||||||||          | | ||||||||  ||||||    
T  34096010 ttgtttcaaaacgaatgtcaatttacatttctaatacaattttaattttttttttttcaactttaccctcaataaatattcaaacttttctctcacacaa 34096109  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||  || |||||||||||||||  |||| ||||| |||    
T  34096110 ttttcaatgaaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaagtgttaagtctaatgattatttcatttcattttttaatttgt 34096209  T
Q  299 g 299  Q
    |    
T  34096210 g 34096210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 39671174 - 39671068
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||| ||||| ||||||| || |||||| ||||||||| ||||    
T  39671174 tctcacacaattttcaatgcaactttaagtttgtttttttcttataaagtaaaggtagtttagtaaatgtgttatgtctaatgataatttcattccattt 39671075  T
Q  289 cttaatc 295  Q
    |||||||    
T  39671074 cttaatc 39671068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 296
Target Start/End: Complemental strand, 45520617 - 45520419
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctcaca--c 196  Q
    ||||| ||| |||||||||||||||||||||||  ||||||| |||||||||||| |||||| |||| |||         | | | |||||||| ||  |    
T  45520617 aatttattttaaaatgaatgtcactttacattttcaatacaactttaattttttc-ttccaactttatccttgataaatactcaaacttttctctcatac 45520519  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||| ||||||||||||| |||||||| ||||||||| |||||||||| || ||||||||||||| || ||||||||||| |||| ||||||||||||    
T  45520518 aatttttaatgcaactttaagtttgtcttattcttataatgtaagggcagcttagtaaaagtgttatgtctaatgattattttattccatttcttaatct 45520419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 263
Target Start/End: Original strand, 24259606 - 24259771
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||| ||||||||         | ||| ||||    |||||||||    
T  24259606 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 24259705  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||  | ||| |||||| ||||||    
T  24259706 attttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttat 24259771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 296
Target Start/End: Original strand, 30022060 - 30022258
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt--tctcacac 196  Q
    ||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||| ||||||| ||||||||         |  || ||||  ||||||||    
T  30022060 aatttgtttcaaaatgaatgttacttgacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacac 30022159  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||||||||||| | ||||||||||||||||| |  || || ||||| |||||||||||||||  ||||||||||| |||  ||| ||||||||    
T  30022160 aattttcaatgcaactttgagtttgtctttttcttatacaagaa-ggtagtttagtaaaagtgttatatataatgattattttatttcattccttaatct 30022258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 193 - 299
Target Start/End: Original strand, 42672477 - 42672583
Alignment:
Q  193 acacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 292  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| | | ||||| ||||||||||||| || |||||||||||||||  ||| ||||    
T  42672477 acacaattttcaatacaactttaaatttgtctttttcttataaagtatgagtagtttagtaaaagtgttatgtctaatgattatttcattatattcctta 42672576  T
Q  293 atctgtg 299  Q
    || ||||    
T  42672577 atttgtg 42672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 22212336 - 22212535
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatc--ttttctcacacaat 199  Q
    |||||| |||||||||||||| ||||||||| |||| || ||||||||||| ||||||| |||||||||          ||| |  ||||||||||||||    
T  22212336 ttgttttaaaatgaatgtcaccttacatttccaatataactttaatttttttcttccaactttaccctcaataaatactccaacatttttctcacacaat 22212435  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||| ||||||||| ||||  |||||  ||||||  || |||||||| ||||||||||||| || |||||||||||||||  ||| |||||| ||||    
T  22212436 tttcaatacaactttaagtttgagttttttatataaaacaaaggcagttttgtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtg 22212535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 296
Target Start/End: Original strand, 11835099 - 11835295
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcacacaa 198  Q
    ||||| ||||||||||||||||||||||||||| ||||| || ||||||||||| ||| ||| |||||| ||          | | ||| ||||||||||    
T  11835099 aatttatttcaaaatgaatgtcactttacatttttaatataactttaatttttttctttcaaatttaccttcaataaatactcaaccttctctcacacaa 11835198  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||||||||||| ||| || |||||||||||| ||  || |||||  ||||||||||||  | ||| |||||||||||  ||||||||||||    
T  11835199 ttttcaatgcaactttaagtttatc-ttttcttataaactataggtagtttaataaaagtgttatgcctaataattatttcatttcatttcttaatct 11835295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 17499874 - 17499732
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||| ||||||||         | | | ||||    ||||| |||    
T  17499874 ttgtttcaaaatgaatgtcgctttacatttccaatgcaattttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcataca 17499775  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaa 240  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  17499774 attttcaatgcaactttaagtttgtctttttcttataaagtaa 17499732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 56556410 - 56556237
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctccccatcttttctcacacaattttcaatgca 209  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||||| ||| |             ||||||||||||||||||| |    
T  56556410 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgta 56556324  T
Q  210 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |  |||| ||||| |||||||||||||| ||||  | ||| ||||||||||||| || ||||   ||||||||||||| |||||||||||    
T  56556323 atgttaagtttgtatttttcttataaagcaaggataatttagtaaaagtgttatgtctaatg---atttcattcaattccttaatctgtg 56556237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 6462004 - 6462073
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc 180  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||||||||| ||||||| ||||||||||    
T  6462004 ttgtttcaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctcc 6462073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 31987306 - 31987430
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcacaca--attttcaat 206  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||          ||| |||||||| | ||  |||||||||    
T  31987306 aaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcgcataattttcaat 31987405  T
Q  207 gcaactttaattttgtctttttctt 231  Q
    |||||||||| ||||||||||||||    
T  31987406 gcaactttaaatttgtctttttctt 31987430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 266
Target Start/End: Original strand, 35928486 - 35928650
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctcacacaattt 201  Q
    |||||||||||| ||| |||||||||||||  ||||||| ||||||||||| ||||||| ||||||||         |  || | |||||  ||||||||    
T  35928486 ttgtttcaaaataaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactgcaacgtttctttcacaattt 35928585  T
Q  202 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatc 266  Q
    ||||||||| ||||| ||| ||||||||||||||||| | |||| ||| ||||||||| ||||||    
T  35928586 tcaatgcaattttaagtttatctttttcttataaagtcatggcaatttagtaaaagtgatatatc 35928650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 47321136 - 47321341
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaa-ttttttccttccaattttaccct---------ccccatcttttctca---- 193  Q
    ||||||||| |||||||||||||||||||||||  ||||||| ||||| |||||| ||||||| ||||||||         | | | |||||||||        
T  47321136 aatttgttttaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactctaacttttctcactcg 47321235  T
Q  194 cacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaa 293  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||  | ||| |||||| || |||  |   ||| ||||| |||||||| |||||    
T  47321236 cacaattttcaatgcaactttaaggttgtctttttcttataaagtaaggttattttagtaaaattgctatgacatttgactattttattcaattccttaa 47321335  T
Q  294 tctgtg 299  Q
    ||||||    
T  47321336 tctgtg 47321341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 54233902 - 54233954
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 241  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54233902 tctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaag 54233954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 296
Target Start/End: Original strand, 3093433 - 3093539
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    ||||||||||||| | |||||||||||| ||| | |||||||||||||| |||| || |||  | |||||||||| || ||||||||||| |||||||||    
T  3093433 tctcacacaatttccgatgcaactttaaatttct-tttttcttataaaggaaggacaatttaatgaaagtgttatgtctaatgattattttattcaattt 3093531  T
Q  289 cttaatct 296  Q
    ||||||||    
T  3093532 cttaatct 3093539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 31941553 - 31941697
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatct----tttctcacaca 197  Q
    |||||| |||||||||||||||||||||||  ||||||| ||||||||||| ||||||| ||||||||         | ||| ||    | ||||||| |    
T  31941553 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaactattctctctcacata 31941652  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  31941653 attttcaatgcaactttaagtttgtcttgttcttataaagtaagg 31941697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 34124287 - 34124491
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc----ac 194  Q
    ||||||||| |||||||||||| ||||||||||  ||| ||| ||||||||||| ||||||| |||||||||          | | ||||||||    ||    
T  34124287 aatttgttttaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcac 34124386  T
Q  195 acaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||  |   ||| || || |||||||||||||||    
T  34124387 acaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaat 34124486  T
Q  295 ctgtg 299  Q
    |||||    
T  34124487 ctgtg 34124491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 45889649 - 45889702
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  45889649 tctcacacaattttcaatgcaactttaagtttgtttttttcttataaagtaagg 45889702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 28116243 - 28116384
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc----acacaatt 200  Q
    ||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||         | | | ||||||||    ||||||||    
T  28116243 tttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatactcaaacttttctctcacacacaatt 28116342  T
Q  201 ttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||| || |||||||| |||||||| ||||||||||||||||    
T  28116343 ttcagtgtaactttaagtttgtcttattcttataaagtaagg 28116384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 45903441 - 45903377
Alignment:
Q  232 ataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||| |||||||  |||||| ||||||||||||||||||||||||| ||||||||||||    
T  45903441 ataaagtaagagcagtttaataaaagcgttatatccaatgattatttcattctatttcttaatct 45903377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 51434414 - 51434346
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||| |||||||||||| ||||||||||||||| ||| |||||||||||||||| || |||||||||    
T  51434414 ttgttttaaaatgaatgtcgctttacatttctaatgcaactttaattttttccttcaaactttaccctc 51434346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 4408243 - 4408169
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||  | ||| |||||| ||||||    
T  4408243 tctcacacaattttcaatgcaattttaagtttgtctttttcttatatagtaaggttattttagtaaaattgttat 4408169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 19282567 - 19282517
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  19282567 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 19282517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 29840070 - 29840120
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  29840070 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 29840120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 295
Target Start/End: Complemental strand, 38761898 - 38761788
Alignment:
Q  185 cttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattca 284  Q
    |||||||| |||||||||||| | |||||||| | ||||||| ||| ||||||||||||   ||| ||||||||||||| || | | ||||||| ||||     
T  38761898 cttttctctcacaattttcaaggtaactttaagtgtgtctttctctaataaagtaagggtgatttagtaaaagtgttatgtctattaattatttaattct 38761799  T
Q  285 atttcttaatc 295  Q
    |||||||||||    
T  38761798 atttcttaatc 38761788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 293
Target Start/End: Complemental strand, 29289959 - 29289852
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtct---ttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 285  Q
    |||||||||||||||||||||| ||||| |||||||   |||| ||||||||||| |||  |||  ||||| | |||| || |||||||||||||||| |    
T  29289959 tctcacacaattttcaatgcaattttaagtttgtctttttttttttataaagtaaaggcgatttattaaaaatattatgtctaatgattatttcattcca 29289860  T
Q  286 tttcttaa 293  Q
    ||||||||    
T  29289859 tttcttaa 29289852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 51434323 - 51434270
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  51434323 tctcacacaattttcaatgcaacttaaagttagtctttttcttataaagtaagg 51434270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 38692474 - 38692516
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttctt 231  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  38692474 tctcgcacaattttcaatgcaactttaattttgtctttttctt 38692516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 299
Target Start/End: Complemental strand, 51737367 - 51737280
Alignment:
Q  210 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||| ||||||||||||  |||||||||||| | ||| ||||||||||||| || ||| |||||||||||| ||| |||||| ||||    
T  51737367 actttaagtttgtctttttc--ataaagtaagggtaatttagtaaaagtgttatgtctaattattatttcattctattccttaatttgtg 51737280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 299
Target Start/End: Original strand, 30492732 - 30492914
Alignment:
Q  120 aatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc--acacaa-ttttcaatg 207  Q
    |||||||||||||||||||||  ||||||| ||||||||||| || |||| ||||||||         | ||| ||||||||   ||||| |||| ||||    
T  30492732 aatgaatgtcactttacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactccaacttttctcttgcacaattttttaatg 30492831  T
Q  208 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||| ||||||||||||||         ||||||||  ||||||||||||| || |||||||||||||||| ||| |||||| ||||    
T  30492832 caactttaagtttgtctttttctt---------gggcagttcagtaaaagtgttatgtctaatgattatttcattccattccttaatttgtg 30492914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 6462102 - 6462153
Alignment:
Q  191 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||| |||||||||||||||| ||||| || ||||||||||||||||    
T  6462102 tcacacaatattcaatgcaactttaagtttgttttgttcttataaagtaagg 6462153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 39671238 - 39671183
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttc 166  Q
    |||||||||||||||||||  |||||||||| ||||||| |||||||||||| |||    
T  39671238 ttgtttcaaaatgaatgtcgttttacatttccaatacaactttaattttttctttc 39671183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 45903559 - 45903504
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaa 169  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||| || ||||    
T  45903559 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctaccaa 45903504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 6231652 - 6231702
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||||||||||||||||||||| |||| || ||||| |||||||||||    
T  6231652 ttgtttcaaaatgaatgtcactttatatttatagtacaactttaatttttt 6231702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 17317910 - 17317805
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||||||||||||||||     || |||||| ||||||||||||||||| | ||||| ||||||| |  || || ||||||||||| |||  ||||    
T  17317910 tctcacacaattttcaatgca-----aaatttgtccttttcttataaagtaagcgtagtttagtaaaagagcaatgtctaatgattattttattttattt 17317816  T
Q  289 cttaatctgtg 299  Q
     ||||||||||    
T  17317815 tttaatctgtg 17317805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 34534157 - 34534111
Alignment:
Q  191 tcacacaattttcaatgcaac-tttaattttgtctttttcttataaa 236  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  34534157 tcacacaattttcaatgcaacttttaagtttgtctttttcttataaa 34534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 6232194 - 6232141
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||||||||||| ||||||| |||||||||  ||||||| |||||||||||    
T  6232194 aatttgtttcaaaataaatgtcaatttacattttcaatacaactttaatttttt 6232141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 17317999 - 17317950
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||||| |||||||||| ||||||||| ||||||| |||||||||||    
T  17317999 tgtttcaaactgaatgtcacattacatttccaatacaactttaatttttt 17317950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 55126587 - 55126636
Alignment:
Q  193 acacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||  ||||||||||| |||||||| ||||||||||||||||    
T  55126587 acacaattttccttgcaactttaagtttgtcttattcttataaagtaagg 55126636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 6510110 - 6510253
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc--acac 196  Q
    ||||||||||||||| |||||||||||| ||||  ||||||| ||||| ||||| ||  ||| ||||||||         | ||| ||||||||  ||||    
T  6510110 aatttgtttcaaaataaatgtcactttatattttcaatacaactttaacttttttctctcaactttaccctcaataaatactccaccttttctcttacac 6510209  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaa 240  Q
    |||||| |||| || ||||| ||||||||||| |||||||||||    
T  6510210 aatttttaatgtaattttaagtttgtctttttattataaagtaa 6510253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 54091953 - 54092021
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||| ||||||||||||| |||| |||| |||||||| ||||||||||| ||  ||| |||||||||    
T  54091953 ttgttttaaaatgaatgtcaatttagatttttaatacaactttaatttttttctctcaactttaccctc 54092021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 1868255 - 1868208
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattt 158  Q
    ||||||||||||||||||||||||||||||  ||| ||| ||||||||    
T  1868255 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaattt 1868208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 232
Target Start/End: Complemental strand, 32141280 - 32141163
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatt-ttttccttccaattttaccctcccca--tcttttctcacacaattttcaatg 207  Q
    ||||||||||||||| ||||||| | ||||  ||||||| ||||||| |||| ||||||| ||||||||| |||  ||||| ||||||        ||||    
T  32141280 ttgtttcaaaatgaacgtcacttcatattttgaatacaactttaattttttttcttccaactttaccctctccaactctttcctcaca-------taatg 32141188  T
Q  208 caactttaattttgtctttttctta 232  Q
    ||||||||| |||||||||||||||    
T  32141187 caactttaagtttgtctttttctta 32141163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 45049711 - 45049754
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||    
T  45049711 aaaattaatgtcactttacatttttaatataattttaatttttt 45049754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 44835341 - 44835387
Alignment:
Q  123 gaatgtcactttacatttctaatacaattttaattttttccttccaa 169  Q
    |||| |||||||||||||| ||||||| ||||||||||| |||||||    
T  44835341 gaatatcactttacatttcgaatacaactttaatttttttcttccaa 44835387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 38692406 - 38692459
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||||| |||||||||||||||||||||||  |||  || |||||||||||    
T  38692406 aatttgttttaaaatgaatgtcactttacattttcaattaaactttaatttttt 38692459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 29840201 - 29840249
Alignment:
Q  251 gtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||| || |||||||||||||||| ||| |||||| ||||    
T  29840201 gtaaaagtgttatgtctaatgattatttcattccattccttaatttgtg 29840249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 55548286 - 55548234
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 241  Q
    |||| |||||||| |||||||||||||| ||||||||| ||  ||||||||||    
T  55548286 tctctcacaatttccaatgcaactttaagtttgtctttgtcaaataaagtaag 55548234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 5e-59; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 109 - 297
Target Start/End: Complemental strand, 29795346 - 29795156
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttct--cacacaattttcaat 206  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||| ||| |||||||  |||||||||||||||    
T  29795346 atttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctctccaacttttctttcacacaattttcaat 29795247  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 297  Q
    ||||||||||  |||||||||||||||||| |||||||||||| |||||||| |||| || |||||||||||||||| |||  ||||||||    
T  29795246 gcaactttaaagttgtctttttcttataaaataagggcagtttagtaaaagtattatgtctaatgattatttcattccattcattaatctg 29795156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 134 - 299
Target Start/End: Original strand, 40410473 - 40410640
Alignment:
Q  134 tacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttctt 231  Q
    |||||||| ||||||| ||||||||||| || |||| ||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  40410473 tacatttccaatacaactttaatttttttctcccaactttaccctctccaacttttctctgacacaattttcaatgcaactttaattttgtctttttctt 40410572  T
Q  232 ataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||||||  |||||| |||||||||||||||||| |||||| |||||||||||||||    
T  40410573 ataaagtaagggcagtttaataaaagcgttatatccaatgattatgtcattccatttcttaatctgtg 40410640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 118 - 299
Target Start/End: Complemental strand, 40987418 - 40987237
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaactttaat 217  Q
    |||||||||||| ||||||||||  ||||||| ||||||||||| ||||||| ||||||||| ||| |||||||| |||||||||||||||||||||||     
T  40987418 aaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaactttaccctctccaacttttctctcacaattttcaatgcaactttaaa 40987319  T
Q  218 tttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||| ||||||||||||||||||||| || ||| ||||||||||||| || |||||||||||||||  ||| |||||| ||||    
T  40987318 tttatctttttcttataaagtaaggacaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtg 40987237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 4840881 - 4840682
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acacaat 199  Q
    ||||| ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||          | | ||||||||  ||||| |    
T  4840881 ttgttccaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctcccacacagt 4840782  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  4840781 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatttcattccatttcttaatatgtg 4840682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 111 - 279
Target Start/End: Original strand, 1381748 - 1381916
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    |||||| ||||||||||| |||||||||||| |||| || ||| ||||||| ||||||| |||||| || ||| |||||||| |||||||||||||||||    
T  1381748 ttgttttaaaatgaatgttactttacatttccaatataactttgatttttttcttccaactttaccttctccaacttttctctcacaattttcaatgcaa 1381847  T
Q  211 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttc 279  Q
     ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||    
T  1381848 ttttaagtttttctttttcttataaagtaagagcagtttagtaaaagtgttatgtctaatgattatttc 1381916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 113 - 299
Target Start/End: Original strand, 7743401 - 7743598
Alignment:
Q  113 gtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acacaattt 201  Q
    |||| |||||||||||||||||||||||| ||||||| |||||| |||| ||||||| |||||||||          ||| ||||||||  |||||||||    
T  7743401 gttttaaaatgaatgtcactttacatttccaatacaactttaatctttttcttccaactttaccctcaataaatagtccaacttttctctcacacaattt 7743500  T
Q  202 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||  |||||||||||||| ||||  ||||||||||    
T  7743501 tcaatgcaactttaaatttgtctttttcttataaagtaagggcaacttagtaaaagtgttatatctgatgattatttcatttaattctttaatctgtg 7743598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 114 - 296
Target Start/End: Complemental strand, 1298931 - 1298738
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcacaca--atttt 202  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  | || || |||| ||||          ||| |||||||| ||||  |||||    
T  1298931 tttcaaaatgaatgtcactttacatttctaatacaactttaatttttctcatcgaactttatcctcaataaattctccaacttttctctcacataatttt 1298832  T
Q  203 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  ||||||| ||||||||||||||||  ||||||||||||    
T  1298831 caatgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatattcaatgattatttcattttatttcttaatct 1298738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 112 - 282
Target Start/End: Complemental strand, 4766341 - 4766184
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaac 211  Q
    ||||||||||||||||||| |||||||||  ||||||| ||||||||||| ||||||| ||| |             |||||||||||||||||||||||    
T  4766341 tgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttccaacttttc-------------tctcacacaattttcaatgcaac 4766255  T
Q  212 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |  ||||||||||||||||||||||||    
T  4766254 tttaattttgtctttttcttataaagtaaaggcagtttagtaataacgttatatccaatgattatttcatt 4766184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 24775184 - 24775386
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccc---------catcttttctc--acac 196  Q
    ||||||||| ||||||| |||||||||||||||  ||||||||||||||||||| || |||| |||||||||           || ||||||||  ||||    
T  24775184 aatttgttttaaaatgattgtcactttacattttcaatacaattttaatttttttctcccaagtttaccctcaataaatacttcaacttttctctcacac 24775283  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||||||  |||||||| ||||| |||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||  |||||| |    
T  24775284 aattttcaatataactttaagtttgtttttttcttataaagtaagagcattttagtaaaagtgttatatctaatgattatttcattcaataccttaattt 24775383  T
Q  297 gtg 299  Q
    |||    
T  24775384 gtg 24775386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 116 - 282
Target Start/End: Complemental strand, 36360522 - 36360347
Alignment:
Q  116 tcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccat---------cttttctcacacaattttcaat 206  Q
    ||||||||||| ||||||| |||||  ||||||| ||||||||||| ||| ||| |||||||||   ||         ||||||||||||||||||||||    
T  36360522 tcaaaatgaatatcactttgcattttcaatacaactttaatttttttctttcaactttaccctcaatatatactcaaacttttctcacacaattttcaat 36360423  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
     ||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||    
T  36360422 acaactttaagtttatctttttcttataaaataagggcagtttagtaaaagtgttatgtctaatgattatttcatt 36360347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 34225771 - 34225944
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctccccatcttttctcacacaattttcaatgca 209  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||  ||||||| ||| |             |||||||||||||||||||||    
T  34225771 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgca 34225857  T
Q  210 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||| | |||| || |||||||||||||||  ||| ||||||||    
T  34225858 actttaagtttgtctttttcttataaagtaagggcaatttagtaaaattattatgtctaatgattatttcatttcattccttaatct 34225944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 189 - 293
Target Start/End: Original strand, 43460860 - 43460961
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||   ||||||||||||||||||||| ||||    
T  43460860 tctcacataattttcaatacaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtg---tatccaatgattatttcattccattt 43460956  T
Q  289 cttaa 293  Q
    |||||    
T  43460957 cttaa 43460961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 42969895 - 42970069
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca--tcttttctcacacaattttcaat 206  Q
    |||| ||| ||||| ||||||||||||||||| |||||| | ||||||||||| |||| ||||||||| ||||||  | |||||||||||||||||||||    
T  42969895 atttattttaaaataaatgtcactttacatttttaataccactttaatttttttcttctaattttaccttccccaacttttttctcacacaattttcaat 42969994  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||||||  || || |||| ||||||| |||| |||| || ||||||||||||  || ||| |||||||||||    
T  42969995 gcaactttaaggttatcatttttttataaaataagagcag-ttagtaaaagtgttacgtctaataattatttcatt 42970069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 197 - 283
Target Start/End: Complemental strand, 14378305 - 14378219
Alignment:
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 283  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  14378305 aattttcaatgcaactttaaatttatctttttcttataaagtaagggcagtttagtaaaagtgttatattaaatgattatttcattc 14378219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 282
Target Start/End: Original strand, 4536572 - 4536742
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca-----tct---tttctcacacaatttt 202  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||| |||||||||  ||     |||   ||||||||||||||||    
T  4536572 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttctcccaactttaccctcaacaaatactctaactttctcacacaatttt 4536671  T
Q  203 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||||||||||| ||||||||||||||         ||||||||| ||||||||| ||| || |||||||||||||||    
T  4536672 caatgcaactttaaatttgtctttttctt---------gggcagtttagtaaaagtgatatgtctaatgattatttcatt 4536742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 37106949 - 37107061
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtcttttt--cttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaat 286  Q
    |||||||||||||||||||||||||||| ||| |||||||  ||||||||||||||||| ||| ||||||||||| | || ||| |||||||||||| ||    
T  37106949 tctcacacaattttcaatgcaactttaagtttttcttttttgcttataaagtaagggcaatttagtaaaagtgttgtgtcaaataattatttcattccat 37107048  T
Q  287 ttcttaatctgtg 299  Q
    |||||||| ||||    
T  37107049 ttcttaatgtgtg 37107061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 256
Target Start/End: Original strand, 16316710 - 16316863
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatctttt--ctcacacaatttt 202  Q
    ||||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||||| |||||  ||          ||| |||||  |||||||||||||    
T  16316710 tttcaaattgaatgtcactttatatttccaatacaactttaatttttttcttccaaatttactttcaataaatattccaacttttatctcacacaatttt 16316809  T
Q  203 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaa 256  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  16316810 caatgcaactttaattttgtctttttcttatacagtaagggcaatttagtaaaa 16316863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 33093363 - 33093434
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| |||||||||    
T  33093363 aatttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 33093434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 43388814 - 43388612
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc--------ccca---tcttttctcacac 196  Q
    |||||||||||||||||||||| ||||||||||  ||| ||| ||||||||||| ||||||| |||||||||        | ||   | || |||||||     
T  43388814 aatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctcacat 43388715  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||  |   ||| || || |||||||||||||||||    
T  43388714 aattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatct 43388615  T
Q  297 gtg 299  Q
    |||    
T  43388614 gtg 43388612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 1360175 - 1360306
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccc---------catcttttctc--acacaat 199  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||||| || ||||||||||||||           || ||||||||  | |||||    
T  1360175 ttgtttcaaaatgaatgtcactttgcatttccaatacaactttaatttttttctcccaattttaccctcaataaatacttcaacttttctcttaaacaat 1360274  T
Q  200 tttcaatgcaactttaattttgtctttttctt 231  Q
    ||||||||||||||||| ||||||||||||||    
T  1360275 tttcaatgcaactttaagtttgtctttttctt 1360306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 18374918 - 18374850
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||||    
T  18374918 ttgtttgaaaatgaatgtcactttacatttccaatataattttaatttttttcttccaactttaccctc 18374850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 14698010 - 14698187
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    ||||||||||||||||||| ||||||||||  ||| ||| ||||||||||| ||||||| ||| | |||           |||||||||||||||| |||    
T  14698010 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaacttttctctc-----------tcacacaattttcaatacaa 14698098  T
Q  211 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||| ||||| |||||||||||||||||||  | ||| |||||| || |||  |   ||| || || ||||||||||||||||||||    
T  14698099 ctttaagtttgtatttttcttataaagtaaggttattttagtaaaattgctatgacatttgactactttattcaatttcttaatctgtg 14698187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 43344288 - 43344195
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||| |||||||||| |||||||||  || ||||||||||||||||||||||  ||||  ||||| |||||| || |||||||||||||||    
T  43344288 tctcacataattttcaatacaactttaaacttatctttttcttataaagtaagggtggtttaataaaattgttatgtctaatgattatttcatt 43344195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 775946 - 775875
Alignment:
Q  192 cacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||  | ||| |||||| ||||||    
T  775946 cacacaattttcaatgcaactttaagtttgtctttttcttataaattaaggttattttagtaaaattgttat 775875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 2459771 - 2459915
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    |||||| |||||||||||| ||||||||||| ||| ||| ||||||||||| ||||||| ||||||||         | ||| ||||    |||||||||    
T  2459771 ttgttttaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 2459870  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||| |||||| | |||||||||| |||||    
T  2459871 attttcaatgcaactttaagtttgtcctattcttataaaataagg 2459915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 4566186 - 4566112
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||  | ||| |||||| ||||||    
T  4566186 tctcacacaattttcaatgcaactttaaatttatctttttcttataaaataaggttattttagtaaaattgttat 4566112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 300
Target Start/End: Original strand, 11171839 - 11171941
Alignment:
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 297  Q
    |||| ||||| |||||||| ||||||||||||  ||||||| |||  | ||| ||||||||||||| || | ||||||||| ||||||||||||||| ||    
T  11171839 atttccaatgtaactttaagtttgtctttttcgcataaagttaggataatttagtaaaagtgttatgtctattgattattttattcaatttcttaatttg 11171938  T
Q  298 tgc 300  Q
    |||    
T  11171939 tgc 11171941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 10581012 - 10580944
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||||| |||||||| ||||  ||||||| ||||||||||| ||||||| |||||||||    
T  10581012 ttgtttcaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctc 10580944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 41984416 - 41984561
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc----acaca 197  Q
    |||||||||||| ||| || ||||||||||  ||||||| ||||||||||| ||||||| |||||| |         | ||| ||||||||    |||||    
T  41984416 ttgtttcaaaataaatatcgctttacattttcaatacaactttaatttttttcttccaactttacctttaataaatactccaacttttctctcacacaca 41984515  T
Q  198 attttcaatgcaactttaa-ttttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  41984516 attttcaatgcaactttaagttttgtcttattcttataaagtaagg 41984561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 25332659 - 25332712
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  25332659 tctcatacaattttcaatacaactctaagtttgtctttttcttataaagtaagg 25332712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 39866736 - 39866683
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||| ||||||||| |||||| ||||||| ||||||||||    
T  39866736 tctcacacaattttcaatacaactttaagtttgtcattttcttgtaaagtaagg 39866683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 10580921 - 10580869
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 241  Q
    |||||||||||||||||| |||||||||  ||||||| |||||||||||||||    
T  10580921 tctcacacaattttcaatacaactttaagattgtcttgttcttataaagtaag 10580869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 39866820 - 39866762
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||||||||||| ||||||||||| ||| ||| ||||||||||| ||||||| ||||||    
T  39866820 aaaatgaatgtcgctttacatttccaatgcaaatttaatttttttcttccaactttacc 39866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 44228609 - 44228659
Alignment:
Q  245 agtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 295  Q
    ||||| |||||||||||||||| |||||||||||||||| |||| ||||||    
T  44228609 agtttagtaaaagtgttatatctaatgattatttcattccattttttaatc 44228659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 776039 - 775972
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||||||||||| ||||||||||  ||| ||| ||||||||||| |||| || |||||||||    
T  776039 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttt-cttctaactttaccctc 775972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 14511459 - 14511511
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttcct 164  Q
    |||||||||||||||||| ||||||||||  |||||||  |||||||||||||    
T  14511459 tgtttcaaaatgaatgtctctttacattttgaatacaacattaattttttcct 14511511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 33093458 - 33093510
Alignment:
Q  190 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||||||||||| ||| ||||  | |||||||||||||    
T  33093458 ctcacacaattttcaatgcaactttaagtttatcttgatgttataaagtaagg 33093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 14378371 - 14378320
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaa 169  Q
    |||||||||||||||||||||||  ||||||| ||||||||||| || ||||    
T  14378371 aaaatgaatgtcactttacattttcaatacaactttaatttttttctcccaa 14378320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 45148106 - 45148055
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc 162  Q
    |||||| |||||||||||||||||||||||  |||| || ||||||||||||    
T  45148106 ttgttttaaaatgaatgtcactttacattttcaataaaactttaattttttc 45148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 6591963 - 6592013
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||| ||||||||| ||| |||||||||| ||||||| |||||||||||    
T  6591963 ttgttttaaaatgaatatcattttacatttccaatacaactttaatttttt 6592013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 25332566 - 25332631
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaatttta 174  Q
    |||||||||||||||||| ||| | ||||||||| ||| ||| ||||||||||| ||||||| ||||    
T  25332566 aatttgtttcaaaatgaacgtcgccttacatttccaatgcaactttaatttttt-cttccaacttta 25332631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 36685898 - 36685828
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct 178  Q
    ||||||||| ||||||||||| |||||  ||||| ||||||||  |||||||||| || ||||| ||||||    
T  36685898 aatttgttttaaaatgaatgttactttcaatttcaaatacaataataattttttcttttcaattgtaccct 36685828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 43344375 - 43344312
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    ||||||||||||||||||||| ||| ||||  ||||||| ||||||||||  ||||||| ||||||    
T  43344375 ttgtttcaaaatgaatgtcaccttatattttcaatacaactttaattttt--cttccaactttacc 43344312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 231
Target Start/End: Original strand, 14511552 - 14511589
Alignment:
Q  194 cacaattttcaatgcaactttaattttgtctttttctt 231  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  14511552 cacaattttcaatgtaactttaaatttgtctttttctt 14511589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 4566263 - 4566227
Alignment:
Q  125 atgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||||||||||||| |||||||| |||||||||||    
T  4566263 atgtcactttacatttttaatacaactttaatttttt 4566227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 43427445 - 43427373
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc 180  Q
    |||||||||||||||||||||||||||   |||| ||| ||||  ||| |||||| || ||||| ||||||||    
T  43427445 aatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctcc 43427373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 248
Target Start/End: Complemental strand, 45148042 - 45147982
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgt-ctttttcttataaagtaagggcagtt 248  Q
    |||||||||||||| |||||||||||||  ||||  ||||| |||||||||||| ||||||    
T  45148042 tctcacacaatttttaatgcaactttaagattgtatttttttttataaagtaagagcagtt 45147982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 48260008 - 48259818
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttct--cacacaattttcaatgc 208  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||| | | |||||||  |||||||||||||||||    
T  48260008 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctctcaaacttttctttcacacaattttcaatgc 48259909  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| ||| |||||||||||||||| |||||||||||  |||||||||||| || || ||||||||||||| ||| |||||||||||    
T  48259908 aactttaagtttatctttttcttataaagcaagggcagtttaataaaagtgttatgtctaacgattatttcattctattccttaatctgtg 48259818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 84648 - 84473
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| |             |||| |||||||||||||||||    
T  84648 ttgttttaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaatttttc-------------tctcgcacaattttcaatgcaa 84562  T
Q  211 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||| ||||||||||||||||||||||||| || ||| ||||||||||||| || |||||||||||||||||||| |||||||||||    
T  84561 ctttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtctaatgattatttcattcaattccttaatctgtg 84473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 111 - 298
Target Start/End: Original strand, 11650056 - 11650254
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc----------cccatcttt-tctcacacaat 199  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| |||||||||          || || ||| |||||||||||    
T  11650056 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaatttttctctcacacaat 11650155  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||| |||||| |  |||||| |||| ||||||||||||||||||||||||||    
T  11650156 ttccaatgcaactttaagtttgtctttttcttttaaagtaagggcagtttagtaaaaatactatatctaatggttatttcattcaatttcttaatctgt 11650254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 112 - 299
Target Start/End: Complemental strand, 1430666 - 1430491
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaac 211  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |             || |||||||||| |||||||||    
T  1430666 tgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaacttttc-------------tcacacacaatttccaatgcaac 1430580  T
Q  212 tttaattttgtctttttcttataaagtaagg-gcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||| ||||||||||||||||||||||| | ||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  1430579 tttaagtttgtctttttcttataaagtaaagtgcagtttagtaaaagtgttatatctaattattatttcattaaatttcttaatctgtg 1430491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 114 - 299
Target Start/End: Complemental strand, 40061048 - 40060861
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaatgcaac 211  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||  ||| || ||||||||| ||| ||||||||  ||| |||||||||||||||    
T  40061048 tttcaaaatgaatgtcactttacattttcaatacaactttaattttttttttcaaactttaccctctccaacttttctcttacaaaattttcaatgcaac 40060949  T
Q  212 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    | |||  || |||||||||||||||||||||||| ||| ||||||||||||| || ||| |||||||||||  |||||||||| ||||    
T  40060948 tataaaattatctttttcttataaagtaagggcaatttagtaaaagtgttatgtctaatcattatttcatttcatttcttaatatgtg 40060861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 111 - 295
Target Start/End: Complemental strand, 24041155 - 24040983
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctccccatcttttctcacacaattttcaatgca 209  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||  ||||||| ||| |             |||||||||||||||||||||    
T  24041155 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgca 24041069  T
Q  210 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 295  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| ||| |||||||    
T  24041068 actttaagtttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatc 24040983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 189 - 298
Target Start/End: Original strand, 52403563 - 52403672
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||    
T  52403563 tctcacataattttcagtgcaactttaattttgtcttttccttataaagtaagggcagtttaataacagtgttatatccaatgattatttcattccattt 52403662  T
Q  289 cttaatctgt 298  Q
    ||||||||||    
T  52403663 cttaatctgt 52403672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 112 - 294
Target Start/End: Original strand, 1428865 - 1429059
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acacaatt 200  Q
    ||||| |||||||||||||||||||||||||||||||| || |||||||| ||| ||| |||||||||          | | ||||||||  ||||||||    
T  1428865 tgttttaaaatgaatgtcactttacatttctaatacaacttaaatttttttcttgcaactttaccctcaataaatactcaaacttttctctcacacaatt 1428964  T
Q  201 ttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    | |||| ||||||||| |||||| |||||||||||||||| ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  1428965 tccaattcaactttaagtttgtccttttcttataaagtaaagggcagtttagtaaaagtgttatatctaataattatttcattcaatttcttaat 1429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 296
Target Start/End: Complemental strand, 5317734 - 5317535
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccc---------catcttttctcac-aca 197  Q
    |||||||||||||||||||||||||||||| ||  ||||||| ||||||||||| ||||||| |||||||||           || |||||||| | |||    
T  5317734 aatttgtttcaaaatgaatgtcactttacaatttcaatacaactttaatttttttcttccaactttaccctcaataaatactacaacttttctctccaca 5317635  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||| ||||||||||||| || |||||||||||||||  ||| ||||||||    
T  5317634 attttcaatgcaactttaagtttgtctttttcttataaaataaggggcaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatct 5317535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 112 - 299
Target Start/End: Complemental strand, 37437549 - 37437358
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca---tcttttctcacacaattttcaatgc 208  Q
    ||||||||||||| | || ||||||||||  ||||||||||||||| ||| ||| ||| |||| |||| | |   | || ||||||||||||||||||||    
T  37437549 tgtttcaaaatgagtatcgctttacattttcaatacaattttaattattttctttcaactttatcctctctaattttttctctcacacaattttcaatgc 37437450  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggt-aaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| |||||||||||||||||||||||||||| ||| || ||||||||||| || ||||| |||||||||  ||| |||||| ||||    
T  37437449 aactttaagtttgtctttttcttataaagtaagggcaatttagtaaaaagtgttatgtctaatgaatatttcatttcattccttaatatgtg 37437358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 43929683 - 43929881
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc----------cccatcttttctcacacaatt 200  Q
    |||||||||||||||||||| |||   |||| ||||||| ||||||||||||||||||| |||||||||          ||  | || ||||||| ||||    
T  43929683 ttgtttcaaaatgaatgtcaatttcagtttccaatacaactttaattttttccttccaactttaccctcaataaatactccacttttctctcacataatt 43929782  T
Q  201 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||| || ||||||||| || |||||||||||||||||||| || ||| | ||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  43929783 ttcgatacaactttaagttagtctttttcttataaagtaatggaagtatagtaaaagtgttatgtctaatgattatttcattcaatttcttaatttgtg 43929881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 10691020 - 10690910
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||||| |||||| ||||||||| |||||||||||||||  ||||    
T  10691020 tctcacacaattttcaatgcaactttaagtttgtctttttcttacgaagtaagtgcagtttagtaaaaatgttatatctaatgattatttcatttcattt 10690921  T
Q  289 cttaatctgtg 299  Q
    |||||| ||||    
T  10690920 cttaatatgtg 10690910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 156 - 299
Target Start/End: Original strand, 30006182 - 30006327
Alignment:
Q  156 ttttttccttccaattttaccctccccatcttttctcaca--caattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggta 253  Q
    |||||| ||| ||| ||||||||| ||| |||||||| ||  ||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||| |||    
T  30006182 tttttttctttcaactttaccctctccaacttttctctcaaacaattttcaatgcaactttaaatttatctttttcttataaagtaagagcaatttagta 30006281  T
Q  254 aaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    | |||||||| || ||||||||||||||||||||  ||||||||||    
T  30006282 atagtgttatgtctaatgattatttcattcaattcattaatctgtg 30006327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 186 - 299
Target Start/End: Original strand, 6332251 - 6332364
Alignment:
Q  186 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 285  Q
    |||||||||||||||||||||| |||||||  |||||||||||| ||||||  || |||||||| ||||||||||||| || ||||||||||||||||||    
T  6332251 ttttctcacacaattttcaatgtaactttatgtttgtctttttcatataaaacaaaggcagtttagtaaaagtgttatgtctaatgattatttcattcaa 6332350  T
Q  286 tttcttaatctgtg 299  Q
    ||||||||| ||||    
T  6332351 tttcttaatttgtg 6332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 114 - 299
Target Start/End: Complemental strand, 28751560 - 28751363
Alignment:
Q  114 tttcaaaatgaa-tgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcac--acaattt 201  Q
    |||||||||||| |||||||||||||||  ||||||| ||||||||||| ||||||| |||||||||          | | |||||||| |  |||||||    
T  28751560 tttcaaaatgaaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctcgcacaattt 28751461  T
Q  202 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| |||||| || ||||||||||| |||  ||| |||||||||||    
T  28751460 tcaatgtaactttaagtttgtccttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattattttatttcattccttaatctgtg 28751363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 12002244 - 12002443
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc-----------ctccccatcttttctcacacaat 199  Q
    |||||| ||||||||||||| |||||||||| ||||||| ||||||||||| ||||||  ||||||           ||||   | ||||||||||||||    
T  12002244 ttgttttaaaatgaatgtcattttacatttccaatacaactttaatttttttcttccagctttaccttcaataaatactccaacttttttctcacacaat 12002343  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||||||||| |||||||| |||| ||  ||||||||||||||  ||| |||||| ||||    
T  12002344 tttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttagtaaaagtattatgtctgatgattatttcatttcattccttaatatgtg 12002443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 282
Target Start/End: Complemental strand, 17919971 - 17919793
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatct-----------tttctcacacaatttt 202  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||| |||||||||   || |           ||||||||||||||||    
T  17919971 tttcaaaatgaatatcactttacatttccaatacaactttaatttttttcttccaactttaccctcaatatatactctaacttttttctcacacaatttt 17919872  T
Q  203 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||||||||||| |||||||||||  ||||||  ||||||||||| ||||||||||||| |  |||||||||||||||    
T  17919871 caatgcaactttaagtttgtctttttaatataaaacaagggcagtttagtaaaagtgttatgt-taatgattatttcatt 17919793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 189 - 294
Target Start/End: Complemental strand, 43105667 - 43105562
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||| ||| || | ||| ||||||||||||| || |||||||||||||||||||||    
T  43105667 tctcacgcaattttcaatgcaattttaagtttgtctttttcttataaaataatggtaatttagtaaaagtgttatgtctaatgattatttcattcaattt 43105568  T
Q  289 cttaat 294  Q
    ||||||    
T  43105567 cttaat 43105562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 50350012 - 50349812
Alignment:
Q  111 ttgtttcaaaatgaat--gtcactttacatttctaatacaattttaattttttccttcca----attttaccctccccatcttttctcacacaattttca 204  Q
    ||||||||||||||||  ||||||||||||||| ||||||| ||||||||||| ||||||    | |  |  |||    | || ||||||||||||||||    
T  50350012 ttgtttcaaaatgaatatgtcactttacatttccaatacaactttaatttttttcttccacctcaataaatactcaaacttttctctcacacaattttca 50349913  T
Q  205 atgcaactttaattttgtctttttc------ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||||||| ||||||||||||      |||||||||||||||||||| ||||||||||||| || |||||||||||||||| ||| |||||| |||    
T  50349912 atgcaactttaagtttgtctttttcttataattataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatttgt 50349813  T
Q  299 g 299  Q
    |    
T  50349812 g 50349812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 104 - 241
Target Start/End: Complemental strand, 44582941 - 44582791
Alignment:
Q  104 aaacaatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tc 190  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||||| ||||||||         | ||| ||||    ||    
T  44582941 aaacaatttatttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctatc 44582842  T
Q  191 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 241  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  44582841 tcacataattttcaatgcaactttaagtttgtctttttcttataaagtaag 44582791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 2459003 - 2459203
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccat---------cttttctcacacaa 198  Q
    |||||||||||||||||||||| ||||||||||  ||| ||| ||||||||||| ||||||| |||||||||  ||          |||||||| |||||    
T  2459003 aatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaacaaatactcaaacttttctctcacaa 2459102  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||  |   ||| || |||||| |||||||||||||||    
T  2459103 ttttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactacttcatttaatttcttaatctgt 2459202  T
Q  299 g 299  Q
    |    
T  2459203 g 2459203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 38132322 - 38132202
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| ||| |           ||||||||||||||||||||||||    
T  38132322 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacttttc-----------tttctcacacaattttcaatgcaa 38132234  T
Q  211 ctttaattttgtctttttcttataaagtaagg 242  Q
    |||||| | |||||| ||| ||||||||||||    
T  38132233 ctttaagtatgtcttgttcctataaagtaagg 38132202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 45749554 - 45749470
Alignment:
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 283  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||||||||||| || ||||||||||| ||||    
T  45749554 ttttcaatgtaaatttaagtttgtctttttcttataaagtaagggcggtttagtaaaagtgttatgtctaatgattattttattc 45749470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 26252116 - 26252260
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||| ||||||| ||||||||         | | | ||||    |||||||||    
T  26252116 ttgtttcaaaatgaatgtcactttacatttccaatacaacttaaatttttttcttccaactttacccttaataaatactctaacttttttctctcacaca 26252215  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  26252216 attttcaatgcaactttaagtttgtcttgttcttataaaataagg 26252260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 44583767 - 44583968
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttct--cacac 196  Q
    ||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| ||||  | ||||||||         | | | |||||||  ||||     
T  44583767 aatttgttttaaaatgaatgtcaccttacatttttaatacaactttaatttttttcttctgactttacccttaataagtactctaacttttctttcacat 44583866  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    | ||||||||||||| |||| ||||||||||||||||||| ||| |||||||| | |||| |||||| || ||||||||||| |||  |||||||||| |    
T  44583867 agttttcaatgcaacattaagtttgtctttttcttataaaataa-ggcagtttaggaaaattgttatgtctaatgattattttatttcatttcttaattt 44583965  T
Q  297 gtg 299  Q
    |||    
T  44583966 gtg 44583968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 194 - 296
Target Start/End: Original strand, 2245880 - 2245982
Alignment:
Q  194 cacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaa 293  Q
    |||||||||||||||| |||||| |||||||||||||||||||| || | |||||| |||||| | |||| |  |||||||| ||||||| |||||||||    
T  2245880 cacaattttcaatgcatctttaagtttgtctttttcttataaaggaatgacagtttagtaaaaatattatgtttaatgattacttcattccatttcttaa 2245979  T
Q  294 tct 296  Q
    |||    
T  2245980 tct 2245982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 256
Target Start/End: Original strand, 22664937 - 22665091
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctcacacaattt 201  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||||  || ||||||| ||||||||         | ||| ||| |||| ||||||||    
T  22664937 ttgtttcaaaatgaatgtcactttacatttccaatacaacgttaattaatttcttccaactttaccctcaataaatactccaacttctctctcacaattt 22665036  T
Q  202 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaa 256  Q
    | ||| ||||||||| |||||||| ||||||||||||||||  ||||| ||||||    
T  22665037 ttaattcaactttaagtttgtcttgttcttataaagtaaggttagtttagtaaaa 22665091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 239
Target Start/End: Complemental strand, 255068 - 254926
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctcc---------ccatcttttctcac----ac 196  Q
    ||||||||||||||||||| ||||||||||| ||| ||| |||||||||||  ||||||| |||||||||          ||| ||||||||||    ||    
T  255068 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaattttttttcttccaactttaccctcaataaatactccaacttttctcactcacac 254969  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagta 239  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  254968 aattttcaatgcaactttaagtttgtctttttcttataaagta 254926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 274
Target Start/End: Complemental strand, 48320153 - 48319981
Alignment:
Q  102 ataaacaatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacaca-att 200  Q
    ||||| || |||||| ||||| ||||| |||||| ||||  ||||||| |||||||||||| ||| || ||||| ||| |||  || |||| |||| | |    
T  48320153 ataaaaaaattgttttaaaataaatgttactttatattttcaatacaaatttaattttttctttc-aactttactctctccaatttatctctcacacaat 48320055  T
Q  201 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgatt 274  Q
    ||| |||||||||||| ||||||||| | |||||||||||||||| ||| |||||||| |||| || |||||||    
T  48320054 ttcgatgcaactttaagtttgtctttcttttataaagtaagggcaatttagtaaaagtcttatgtctaatgatt 48319981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 17806529 - 17806392
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt--tctcacacaat 199  Q
    |||||| ||||||| |||| ||||||||||| ||||||| ||||||||||| |||||||||||||| |         | ||| ||||  ||||| |||||    
T  17806529 ttgttttaaaatgagtgtcgctttacatttccaatacaactttaattttttacttccaattttaccttcaataaatactccaacttttctctcatacaat 17806430  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaag 237  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  17806429 tttcaatgcaattttaagtttgtctttttcttataaag 17806392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 282
Target Start/End: Original strand, 40719020 - 40719195
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc-----------ctccccatcttttctcacacaattttcaat 206  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||| ||||||| ||||||           ||||   | |||||| |||||||| |||||    
T  40719020 aaaatgaatgtcaatttacatttttaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttttcttacacaattctcaat 40719119  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
     ||||||||| ||| |||||||| ||||||  || |||||||| |||||| ||| || || |||||||||||||||    
T  40719120 acaactttaaatttatctttttcatataaaacaatggcagtttagtaaaaatgtgatgtctaatgattatttcatt 40719195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 12851739 - 12851870
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccat---------cttttc--tcacacaat 199  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||||||| || |||| |||||||||   ||         ||||||  ||| |||||    
T  12851739 ttgtttcaaaatgaatgtcactttacatttccaatagaactttaatttttttctcccaactttaccctcaatatatactcaaacttttcattcatacaat 12851838  T
Q  200 tttcaatgcaactttaattttgtctttttctt 231  Q
    ||| ||||||||||||||||||||||||||||    
T  12851839 ttttaatgcaactttaattttgtctttttctt 12851870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 43755115 - 43755187
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgtt 261  Q
    |||||||||||||||||  ||||||||| |||||||||||||||| ||||||||||  ||| |||||||||||    
T  43755115 tctcacacaattttcaaaacaactttaagtttgtctttttcttattaagtaagggcgatttagtaaaagtgtt 43755187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 263
Target Start/End: Original strand, 49894869 - 49894943
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  49894869 tctcacacaattttcaatgtaactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgttat 49894943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 50158342 - 50158276
Alignment:
Q  230 ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||  ||||||||||||    
T  50158342 ttataaagcaagggaagtttagtaaaagtgttatatccaatgattattgcattatatttcttaatct 50158276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 42650314 - 42650261
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  42650314 tctcacacaattttcaatgcaattttaagtttgtctttttcttataaactaagg 42650261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 45377301 - 45377236
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||||||||||||||||| ||||||| |||| |||||| || |||| |||||||||    
T  45377301 tttcaaaatgaatgtcactttacatttccaatacaactttactttttttctcccaactttaccctc 45377236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 5854289 - 5854238
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 240  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  5854289 tctcacacaattttcaatgcaaccttaaggttgtctttttcttataaagtaa 5854238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 672346 - 672300
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataa 235  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  672346 tctcacacaattttcaatgcaaatttaagtttgtctttttcttataa 672300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 9333105 - 9333155
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  9333105 ttgttttaaaataaatgttactttacatttctaatacaattttaatttttt 9333155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 9356878 - 9356928
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  9356878 ttgttttaaaataaatgttactttacatttctaatacaattttaatttttt 9356928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 15698905 - 15698705
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc--------ccca---tcttttctcacacaat 199  Q
    |||||| |||||||||||||||||| ||||| ||||||| ||||||||| | ||||||| ||||| |||        | ||   | || ||||||| |||    
T  15698905 ttgttttaaaatgaatgtcactttatatttccaatacaactttaattttcttcttccaactttactctcaataaatactcaaacttttctctcacataat 15698806  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagta-agggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||  |||||||| ||| |||||||||||||||||| | || |||||  | |||||||||| || ||||||||||| |||  ||| |||||| |||    
T  15698805 tttcaatagaactttaagtttatctttttcttataaagtacatggtagtttatttaaagtgttatgtctaatgattatttaattttattccttaatttgt 15698706  T
Q  299 g 299  Q
    |    
T  15698705 g 15698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 28200287 - 28200234
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  28200287 tctcgcacaattttcaatacaactttaagtttgtatttttcttataaagtaagg 28200234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 189 - 241
Target Start/End: Complemental strand, 9552420 - 9552368
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 241  Q
    ||||||| ||||||||||||||||||||  ||||||| |||||||||||||||    
T  9552420 tctcacataattttcaatgcaactttaagattgtcttgttcttataaagtaag 9552368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 42650407 - 42650339
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||| |||| ||||| |||||| ||||||||||||||||||| ||||||||||| ||||||  ||||||    
T  42650407 aattagttttaaaataaatgtcgctttacatttctaatacaactttaatttttttcttccagctttacc 42650339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 44024543 - 44024611
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||||||||| | ||||||||||  ||| ||| ||||||||||| ||||||| |||||||||    
T  44024543 ttgtttcaaaatgaatgccgctttacattttcaatgcaactttaatttttttcttccaactttaccctc 44024611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 294
Target Start/End: Complemental strand, 43738317 - 43738214
Alignment:
Q  191 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttct 290  Q
    |||| |||||||||| | |||||||  ||| ||||||||||||||||||| || ||||| |||||| | |||| || ||| ||||||| |||  ||||||    
T  43738317 tcacgcaattttcaaagtaactttatatttatctttttcttataaagtaaaggtagtttagtaaaaatattatgtctaataattattttatttcatttct 43738218  T
Q  291 taat 294  Q
    ||||    
T  43738217 taat 43738214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 35149436 - 35149394
Alignment:
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagta 239  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  35149436 aattatcaatgcaactttaattttatctttttcttataaagta 35149394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 28200379 - 28200310
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacattt-ctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||||||||||| || ||||||| | ||| ||| ||||||||||| ||||||| |||||||||    
T  28200379 ttgtttcaaaatgaatgtcgctctacattttcaaatgcaactttaatttttttcttccaactttaccctc 28200310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 50158458 - 50158397
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaatt-ttttccttccaatttta 174  Q
    |||||||||||||||||||||||||||  ||||||| ||||||| |||| ||||||| ||||    
T  50158458 tttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttta 50158397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 9552484 - 9552436
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttt 159  Q
    |||||| ||||||||||||| |||||||||| ||||||| |||||||||    
T  9552484 ttgttttaaaatgaatgtcattttacatttccaatacaactttaatttt 9552436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 15647215 - 15647150
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct 178  Q
    ||||||||||||||||||||||||||||||  ||||||| |||  |||||| || |||| ||||||||    
T  15647215 ttgtttcaaaatgaatgtcactttacattttcaatacaaattt--tttttttctcccaactttaccct 15647150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 43755054 - 43755102
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttc 162  Q
    |||||||||||| ||||||||||||||  ||||||| ||||||||||||    
T  43755054 tttcaaaatgaacgtcactttacattttcaatacaactttaattttttc 43755102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 49894807 - 49894859
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttc 166  Q
    ||||||||||||||| | |||||||||| ||||||| ||||||||||| ||||    
T  49894807 tttcaaaatgaatgttattttacatttccaatacaactttaatttttttcttc 49894859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 50591381 - 50591309
Alignment:
Q  191 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    |||||||||||||||||||| ||||| |||||||| ||| |||||| |||||  | ||| |||||| ||||||    
T  50591381 tcacacaattttcaatgcaattttaagtttgtcttgttcctataaaataaggttattttagtaaaattgttat 50591309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 5854383 - 5854312
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||| ||| |||||| ||||||||||| ||| ||| |||||||||||  |||||| |||| ||||    
T  5854383 aatttgtttcagaataaatgtcgctttacatttccaatgcaactttaatttttttattccaactttatcctc 5854312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 26582923 - 26582978
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttc 166  Q
    |||||| ||||| ||||| |||||||||||| ||||||| ||||||||||| ||||    
T  26582923 ttgttttaaaataaatgttactttacatttccaatacaactttaatttttttcttc 26582978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 11134614 - 11134568
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattt 158  Q
    |||||||||||||||||||||||||||||  ||| ||| ||||||||    
T  11134614 tgtttcaaaatgaatgtcactttacattttcaatgcaactttaattt 11134568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 2245791 - 2245852
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||| ||||||||  ||||||| |||||| |||| ||| ||| |||||||||    
T  2245791 aaaatgaatgtcaccttacattttcaatacaactttaatctttttctttcaactttaccctc 2245852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 6332164 - 6332229
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaa-ttttttccttccaattttac 175  Q
    |||||| ||||||||||||||||||||||| ||| |||| ||||| |||||| ||| ||| |||||    
T  6332164 ttgttttaaaatgaatgtcactttacatttttaacacaactttaattttttttctttcaactttac 6332229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 43738408 - 43738344
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttac 175  Q
    |||||| |||||||||||||||| ||||||  ||||||| || |||||||| ||| ||| |||||    
T  43738408 ttgttttaaaatgaatgtcacttcacattttcaatacaacttaaatttttttctttcaactttac 43738344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 50249305 - 50249377
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc 180  Q
    |||||||||||||||||||||||||||   |||| ||| ||||  ||| |||||| || ||||| ||||||||    
T  50249305 aatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctcc 50249377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 5e-56; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 111 - 294
Target Start/End: Complemental strand, 28044286 - 28044101
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaatgc 208  Q
    |||||| |||||||||||||||||||||||  ||||||| ||||||||||| ||||||| |||| |||| |||  |||||||  |||||||||||||| |    
T  28044286 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttatcctctccaatttttctctcacacaattttcaatac 28044187  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||  ||||||||||    
T  28044186 aactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatttcattttatttcttaat 28044101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 41906091 - 41905890
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct--------ccccatcttttctc--acaca 197  Q
    ||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||  ||||||| ||||||          | ||| ||||||||  |||||    
T  41906091 aatttgttttaaaataaatgtcactttacatttctaatacaactttaagttttctcttccaactttacctcaataaatactccaacttttctcttacaca 41905992  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |  |||||||||||||    
T  41905991 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcagttcatttcttaatctg 41905892  T
Q  298 tg 299  Q
    ||    
T  41905891 tg 41905890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 32275203 - 32275393
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttc--tcacacaattttcaatgc 208  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||| | | ||||||  ||||||||||||||||||    
T  32275203 ttgtttcaaaatgaatgccactttacatttctaatacaactttaatttttttcttccaactttaccctctcaaacttttccttcacacaattttcaatgc 32275302  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| ||||  ||||||||||||||||| |||||||| ||||||  || || |  |||||||||||||||  |||||||||| ||||    
T  32275303 aactttaagtttgattttttcttataaagtaaaggcagtttagtaaaaacgtcatgtttaatgattatttcatttcatttcttaatatgtg 32275393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 108 - 298
Target Start/End: Complemental strand, 36447759 - 36447567
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacaca--attttcaa 205  Q
    ||||||||| ||||||||| |||||||| ||||  ||||||| ||||||||||| ||||||| ||||||||  ||| |||||||| ||||  ||||||||    
T  36447759 aatttgttttaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctttccaacttttctctcacataattttcaa 36447660  T
Q  206 tgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    | ||||||||||||| ||||||||||||||||||| | ||||||  |||||| |||||||||| | |||||||||||| ||||||||||||||    
T  36447659 ttcaactttaattttatctttttcttataaagtaaagacagtttaataaaagagttatatccagtaattatttcattccatttcttaatctgt 36447567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 18886665 - 18886843
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatg 207  Q
    ||||||||| ||||||||| |||||||||||||  ||||||| ||||||||||| ||||||| |||          |||||   ||||||||||||||||    
T  18886665 aatttgttttaaaatgaatctcactttacattttcaatacaactttaatttttttcttccaacttt----------tcttt---cacacaattttcaatg 18886751  T
Q  208 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| |||||||| ||||||    
T  18886752 caactttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttatatctaatgattatttcattccatttcttagtctgtg 18886843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 121 - 299
Target Start/End: Complemental strand, 34002277 - 34002087
Alignment:
Q  121 atgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acacaattttcaatgca 209  Q
    ||||||||||||||||||||| ||||||| ||||||||| | ||||||| |||||||||          ||| ||||||||  |||||||||||||||||    
T  34002277 atgaatgtcactttacatttccaatacaagtttaattttattcttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgca 34002178  T
Q  210 actttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||||||||||||||||||| ||| ||||||| | ||| ||||||||||||||||||||||||||  |||||||||||||||    
T  34002177 actttaattttgtctttttcttataaagtaaagtgcagtttagcaaaggtgttatatccaatgattatttcatttcatttcttaatctgtg 34002087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 117 - 295
Target Start/End: Complemental strand, 22627495 - 22627313
Alignment:
Q  117 caaaatgaatgtcactttacatttctaatacaattttaattttttc--cttccaattttaccctccccatcttttctc--acacaattttcaatgcaact 212  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||   ||||||| ||||||||| ||| ||||||||  ||||||||||||||||||||    
T  22627495 caaaatgaatgtcactttacatttccaatacaactttaatttttttttcttccaactttaccctctccaacttttctctcacacaattttcaatgcaact 22627396  T
Q  213 ttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 295  Q
    |||| |||||||| || ||||||||||| |||||||| ||||| ||||||| |  || ||||||||||||  ||| |||||||    
T  22627395 ttaagtttgtcttatttttataaagtaaaggcagtttagtaaatgtgttatgtttaacgattatttcatttcattccttaatc 22627313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 42121549 - 42121740
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctccccatcttttctcaca--caattttcaatg 207  Q
    ||||||||||||||||||||||||| ||||| ||||||| |||||||||||  ||||||| ||||| ||| ||| |||||||| ||  ||||||||||||    
T  42121549 ttgtttcaaaatgaatgtcactttatatttccaatacaactttaattttttttcttccaactttactctctccaacttttctctcaaacaattttcaatg 42121648  T
Q  208 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||| | | ||||||||| ||||||||||| |||||| ||||||||| ||| || ||||||||||| |||  ||| |||||||||||    
T  42121649 caactttaagtgtatctttttctaataaagtaaggtcagtttagtaaaagtgatatgtctaatgattatttgatttcattccttaatctgtg 42121740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 108 - 299
Target Start/End: Original strand, 17869233 - 17869435
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acac 196  Q
    ||||||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||| |||| ||||          | ||||||||||  ||||    
T  17869233 aatttgtttcaaaatgaatgtcattttacatttccaatgcaactttaattttttccttccaactttatcctcaataaatactcaatcttttctctcacac 17869332  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||||||||||||| ||||| ||||||||||||||||| | || |||  |||||||||||| || |||||||||||||||  ||| ||||||||    
T  17869333 aattttcaatgcaactttaagtttgtatttttcttataaagtaaagacaatttaataaaagtgttatgtctaatgattatttcatttcattccttaatct 17869432  T
Q  297 gtg 299  Q
    |||    
T  17869433 gtg 17869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 115 - 265
Target Start/End: Complemental strand, 40207528 - 40207379
Alignment:
Q  115 ttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaacttt 214  Q
    |||||||||||||||| |||| |||| |||||||| ||||||||||| ||| ||| |||| ||||  || |||||| | ||||||||||||||||| |||    
T  40207528 ttcaaaatgaatgtcattttatatttttaatacaactttaatttttttctttcaactttatcctcttcaacttttc-ctcacaattttcaatgcaatttt 40207430  T
Q  215 aattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 265  Q
    || |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  40207429 aagtttgtcattttcttataaagtaagggcagtttagtaaaagtgttatat 40207379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 108 - 296
Target Start/End: Complemental strand, 33056435 - 33056242
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttaca---tttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaatttt 202  Q
    ||||||||||||||| ||||||| ||||||   |||| ||||||| |||||||||||| ||| || |||| |||| ||| ||||||||  ||||||||||    
T  33056435 aatttgtttcaaaataaatgtcattttacaacatttccaatacaactttaattttttctttc-aactttatcctctccaacttttctctcacacaatttt 33056337  T
Q  203 caatgcaactttaattttgtctttttctta-taaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||  ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |  |||||||||||||||  ||| ||||||||    
T  33056336 caatgcagttttaaatttgtctttttcttaataaagtaagggcagtttagtaaaagtgttatgtttaatgattatttcatttcattccttaatct 33056242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 34733394 - 34733500
Alignment:
Q  186 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 285  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||  |    
T  34733394 ttttctctcacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgattatttcatttca 34733493  T
Q  286 tttctta 292  Q
    |||||||    
T  34733494 tttctta 34733500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 3681077 - 3680878
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctcacaca--at 199  Q
    |||||| |||||||||||||||||||||||  ||||||| ||||||||| | ||||||| |||||| |         | | | |||||||| ||||  ||    
T  3681077 ttgttttaaaatgaatgtcactttacattttcaatacaactttaattttgttcttccaactttaccattaataaatacactaacttttctctcacagaat 3680978  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||| |||| || |||||||||||||||| |||| ||||||||||    
T  3680977 tttaaatgcaactttaaatttgtctttttcttataaagtaagagcagtttagtaaaagttttatgtctaatgattatttcattccattttttaatctgtg 3680878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 108 - 298
Target Start/End: Original strand, 1103480 - 1103681
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccc---------catcttttctc--acac 196  Q
    ||||||||||||||||||||||| |||||||||| ||||||| ||||||| ||| ||||||| |||||||||           || ||||||||  ||||    
T  1103480 aatttgtttcaaaatgaatgtcattttacatttccaatacaactttaattgttttcttccaactttaccctcaataaatacttcaacttttctctcacac 1103579  T
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||| |||||| |||| | ||   |||||||||||||  ||||||||||||    
T  1103580 aattttcaatgtaactttaaatttgttttttttttataaagtaagggtagtttagtaaaaatgttttgtctggtgattatttcattttatttcttaatct 1103679  T
Q  297 gt 298  Q
    ||    
T  1103680 gt 1103681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 189 - 282
Target Start/End: Complemental strand, 42259614 - 42259521
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||| || ||| ||||| |||||    
T  42259614 tctcacataattttcaatgcaactttaagcttgtctttttcttataaagtaagggcattttagtaaaagtgttatgtctaataattatctcatt 42259521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 40298846 - 40299036
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt--tctcacacaat 199  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| || |||| ||||||||         | ||| ||||  |||||||||||    
T  40298846 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactccaacttttctctcacacaat 40298945  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| |||||||| ||||||||||||||         ||||||||| ||||||||||||| |||||| |||||||||||  ||| |||||| ||||    
T  40298946 tttcaatgtaactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttatgtccaattattatttcatttcattccttaatttgtg 40299036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 32345993 - 32345789
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcac 194  Q
    |||||||||||||||||||||| ||||||||||  ||| ||| ||||||||||| ||||||| ||||||||         | ||| ||||    ||||||    
T  32345993 aatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcac 32345894  T
Q  195 acaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    |||||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||  |   ||| || || |||||||||||||||    
T  32345893 acaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaat 32345794  T
Q  295 ctgtg 299  Q
    |||||    
T  32345793 ctgtg 32345789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 19906413 - 19906555
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc---------cccatcttt--tctcacacaat 199  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||| ||||||| ||||||| |||||||||          ||| ||||  |||| ||||||    
T  19906413 ttgtttcaaaatgaatgtcgctttacatttccaatacaacttttatttttttcttccaactttaccctcaataaatattccaacttttctctctcacaat 19906512  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||    
T  19906513 tttcaatgcaactttaagtttgtcttgttcctataaagtaagg 19906555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 197 - 296
Target Start/End: Complemental strand, 26527454 - 26527356
Alignment:
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||||||||||||| ||| | |||||||||||||||||  ||||||| ||||| ||||||| || |||||||||| ||||| ||||||||||||    
T  26527454 aattttcaatgcaactttaaattttt-tttttcttataaagtaaaagcagtttagtaaaggtgttatgtctaatgattattgcattccatttcttaatct 26527356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 189 - 276
Target Start/End: Complemental strand, 42010640 - 42010553
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattat 276  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||| | |||| || |||||||||    
T  42010640 tctcatacaattttcaatgtaactttaagtttgtctttttcttataaaataagggcagtttagtaaaaatattatgtctaatgattat 42010553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 19288499 - 19288434
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  19288499 tttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttctaactttaccctc 19288434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 263
Target Start/End: Original strand, 26963478 - 26963643
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc----acaca 197  Q
    |||||||||||| ||||||  |||||||||| ||| ||| ||||||||||| ||||||| |||||||||          ||| ||||||||    ||| |    
T  26963478 ttgtttcaaaataaatgtctatttacatttccaatgcaactttaatttttttcttccaactttaccctcaatgaatactccaacttttctctctcacata 26963577  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  | ||| |||||| ||||||    
T  26963578 attttcaatgcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaattgttat 26963643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 43813502 - 43813431
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||| ||||||| |||||||||    
T  43813502 aatttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttcttccaactttaccctc 43813431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 48838750 - 48838635
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtcttt-----ttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 283  Q
    |||||||||||||||||||||||||||| |||||||||     || ||||||||||||| |||||| ||| || |||||| || |||||||||||||||     
T  48838750 tctcacacaattttcaatgcaactttaaatttgtctttttttatttttataaagtaaggtcagtttagtataaatgttatgtctaatgattatttcattt 48838651  T
Q  284 aatttcttaatctgtg 299  Q
     ||| |||||| ||||    
T  48838650 tattccttaatttgtg 48838635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 10684894 - 10684820
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||  | ||| |||||| ||||||    
T  10684894 tctcacacaattttcaattcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaattgttat 10684820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 189 - 263
Target Start/End: Complemental strand, 39117553 - 39117479
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  39117553 tctcacacaattttcaatgcaactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgttat 39117479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 30514972 - 30515037
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||||||||| ||||||| ||||||    
T  30514972 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 30515037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 36447225 - 36447083
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||||||  ||||||| |||| |||         | ||| ||||    |||||||||    
T  36447225 ttgtttcaaaatgaatgtcattttacattttcaatacaattttaatttttctcttccaactttatcctcattaaatactccaacttttctctctcacaca 36447126  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaa 240  Q
    |||||||||||||||||||  ||||||| ||||||||||||||    
T  36447125 attttcaatgcaactttaagcttgtcttattcttataaagtaa 36447083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 36836055 - 36836123
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||||||||||||||||||||| ||||||||||  ||||||| ||||||||||| ||||||| ||||||    
T  36836055 aatttgtttcaaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaactttacc 36836123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 22597226 - 22597297
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||| ||| |||| ||||    
T  22597226 aatttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactttaacctc 22597297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 241
Target Start/End: Complemental strand, 31416906 - 31416763
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc----------ccatcttt---tctcacaca 197  Q
    |||||| ||||||||| |||||||||||||  ||||||| ||||||||||| ||||||| |||||||||           | || |||   |||||||||    
T  31416906 ttgttttaaaatgaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatacttcaatttttctctctcacaca 31416807  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaag 241  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||    
T  31416806 attttcaatgcaactttaaatttgtcttgttcttataaaataag 31416763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 6521907 - 6521960
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  6521907 tctcacacaattttcaatacaattttaagtttgtctttttcttataaagtaagg 6521960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 242
Target Start/End: Complemental strand, 19277110 - 19277057
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  19277110 tctcacacaattttcaatgcaactttaagtttgtcttgttcatataaagtaagg 19277057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 283
Target Start/End: Complemental strand, 30833162 - 30833066
Alignment:
Q  186 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 283  Q
    ||||||||||||||||||| || |||| ||| |||||||||||| ||||||  || | || ||| |||||||||||||||| ||| ||||||||||||    
T  30833162 ttttctcacacaattttcagtgtaactctaagtttgtctttttcatataaaacaa-gacaatttagtaaaagtgttatatctaataattatttcattc 30833066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 42044131 - 42044066
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||| |||||||||||||||||  ||||||| ||||||||||| ||||||| |||||||||    
T  42044131 tttcaaaattaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 42044066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 47272240 - 47272313
Alignment:
Q  190 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||||  ||||||||||| |||||| ||||||    
T  47272240 ctcacacaattttcaatgcaattttatgtttgtctttttcatataaaacaagggcagtttagtaaaattgttat 47272313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 282
Target Start/End: Complemental strand, 33845478 - 33845391
Alignment:
Q  186 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||         ||||||||| |||||||||||| ||  |||||||||||||||    
T  33845478 ttttctcgcacaattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttacatgtaatgattatttcatt 33845391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 32873319 - 32873268
Alignment:
Q  110 tttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||| |||||||||||||||||| ||||| |||||||||||||||||||    
T  32873319 tttgttttaaaatgaatgtcactttatatttccaatacaattttaatttttt 32873268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 18733452 - 18733502
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  18733452 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttt 18733502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 19920419 - 19920358
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| ||  ||| |||||||||    
T  19920419 aaaatgaatgtcactttacatttccaatacaactttaatttttttctctcaactttaccctc 19920358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 5723006 - 5723053
Alignment:
Q  115 ttcaaaatgaatgtcactttacatttctaatacaattttaattttttc 162  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  5723006 ttcaaaatgaatgtcactttacattttcaatacaactttaattttttc 5723053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 18733540 - 18733583
Alignment:
Q  186 ttttctcacacaattttcaatgcaactttaattttgtctttttc 229  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  18733540 ttttctcacacaactttcaatgcaactttaaatttgtctttttc 18733583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 5723090 - 5723128
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttt 227  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  5723090 tctcacacaattttcaatgcaactttaagtttgtctttt 5723128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 10684988 - 10684918
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct 178  Q
    ||||||||||||||||||||   ||||||||||  ||| ||| ||||||||||| ||||||| ||||||||    
T  10684988 aatttgtttcaaaatgaatgctgctttacattttcaatgcaactttaatttttttcttccaactttaccct 10684918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 29001631 - 29001577
Alignment:
Q  187 tttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 241  Q
    |||||||||||||||||||||||||||||| ||||| || ||| |||||| ||||    
T  29001631 tttctcacacaattttcaatgcaactttaagtttgttttgttcctataaaataag 29001577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 716019 - 715947
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc 180  Q
    |||||||||||||||||||||||||||   |||| ||| ||||  |||||||||| || ||||| ||||||||    
T  716019 aatttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctcc 715947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 36836148 - 36836199
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 240  Q
    ||||||| |||||||||||||||||||| |||||||| ||  ||||||||||    
T  36836148 tctcacataattttcaatgcaactttaaatttgtcttgtttctataaagtaa 36836199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 37815722 - 37815789
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct 178  Q
    ||||||||||||||||||| ||||  ||||| ||||||||  |||||||||| || ||||| ||||||    
T  37815722 ttgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttcttttcaattataccct 37815789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 161
Target Start/End: Original strand, 40805014 - 40805073
Alignment:
Q  102 ataaacaatttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    ||||| ||||| ||| ||||| |||||||||||||||||  ||||||| |||||||||||    
T  40805014 ataaaaaatttattttaaaataaatgtcactttacatttacaatacaactttaatttttt 40805073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 42753703 - 42753745
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaat 150  Q
    |||||||||||||||||||||||||||  ||||| ||||||||    
T  42753703 aatttgtttcaaaatgaatgtcactttcaatttccaatacaat 42753745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 32873168 - 32873127
Alignment:
Q  252 taaaagtgttatatccaatgattatttcattcaatttcttaa 293  Q
    ||||| ||||||||| |||||||||| |||||||||||||||    
T  32873168 taaaaatgttatatctaatgattattgcattcaatttcttaa 32873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 18292333 - 18292393
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaatt 171  Q
    ||||||||||||||||||||||||  ||||| ||| ||||  ||| ||||||||| |||||    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcctttcaatt 18292393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 42259702 - 42259635
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||| ||||||||||| | ||||| |||  ||||||| ||||||||||| ||||||| |||||||||    
T  42259702 ttgttttaaaatgaatgttattttacgttttcaatacaactttaatttttt-cttccaactttaccctc 42259635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 118 - 296
Target Start/End: Complemental strand, 12219 - 12040
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaatgcaacttta 215  Q
    ||||||||||||| |||||||||| |||| || ||||||||||| ||||||| ||||||||| | | ||||||||  |||||||||||||||||||||||    
T  12219 aaaatgaatgtcattttacatttccaatataactttaatttttttcttccaactttaccctctcaaacttttctctcacacaattttcaatgcaacttta 12120  T
Q  216 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    | ||||||||||||||||||||||| |||||||| ||||||||||||| || |||||||||||||||| ||| ||||||||    
T  12119 agtttgtctttttcttataaagtaa-ggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatct 12040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 7612496 - 7612694
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc--acacaat 199  Q
    |||||| |||||||||||||||||||||||  |||||||  |||| ||||  ||||||| ||||||||         | ||| ||||||||  |||||||    
T  7612496 ttgttttaaaatgaatgtcactttacattttcaatacaacattaagttttctcttccaactttaccctaaataaatactccaacttttctctcacacaat 7612595  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||| |||||||||||||||    
T  7612596 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagt-aaagcgttatatccaatgattatttcattctatttcttaatctgtg 7612694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 109 - 299
Target Start/End: Complemental strand, 45187441 - 45187251
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgc 208  Q
    |||||||||||||| |||||||||||| ||||  ||||||| ||||||||||| |||  ||  ||| |||| | | |||||||| |||||||||||| ||    
T  45187441 atttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttcttttaacattatcctctctaacttttctctcacaattttcaaagc 45187342  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| |||||||||||||||||||  |||| |||||| |||||||||| || || |||||||||||||||  ||| |||||||||||    
T  45187341 aactttaagtttgtctttttcttataaaacaaggacagtttagtaaaagtgtcatgtctaatgattatttcattatattccttaatctgtg 45187251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 109 - 299
Target Start/End: Complemental strand, 27109977 - 27109775
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acaca 197  Q
    |||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||||| |||||||||          | | ||||||||  |||||    
T  27109977 atttgtttcaaaatgaatgtcactttccatttccaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctcacaca 27109878  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||| |||||||||||||| |||||| |||||||||||||| || | || ||| |||||||||||||||| |||||||||||||||| |||||||||| |    
T  27109877 atttccaatgcaactttaagtttgtccttttcttataaagtaaaagacaatttagtaaaagtgttatatctaatgattatttcattctatttcttaatat 27109778  T
Q  297 gtg 299  Q
    |||    
T  27109777 gtg 27109775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 1774214 - 1774085
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    |||||| ||||||||||||| |||||||||  ||||||| ||||||||||| ||||||| ||||| ||| | | ||||||||  ||||||||||||||||    
T  1774214 ttgttttaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttccaactttacgctctctaacttttctcttacaattttcaatgcaa 1774115  T
Q  211 ctttaattttgtctttttcttataaagtaa 240  Q
    ||||||||||||||||||||||||||||||    
T  1774114 ctttaattttgtctttttcttataaagtaa 1774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 299
Target Start/End: Complemental strand, 38329187 - 38329010
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatg 207  Q
    ||||||||| |||||||||||||||||| ||||  ||||||| ||||||||||| ||| ||| |||||||||             |||||||||||||||    
T  38329187 aatttgttttaaaatgaatgtcactttatattttcaatacaactttaatttttttctttcaactttaccctc-------------acacaattttcaatg 38329101  T
Q  208 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||| ||||||||||  ||||||||||| |||||||| ||||||||||||| || |||||||||||||||| ||| |||||||||||    
T  38329100 caactttaagtttgtcttttgattataaagtaa-ggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatctgtg 38329010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 190 - 296
Target Start/End: Original strand, 2067788 - 2067894
Alignment:
Q  190 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttc 289  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||  |||||| |||||||| |||||||||||||||| |||||    
T  2067788 ctcacacaatttttaatgcaactttaatttggtcttttccttataaagtaagggcagtttaataaaagcgttatatcaaatgattatttcattccatttc 2067887  T
Q  290 ttaatct 296  Q
    |||||||    
T  2067888 ttaatct 2067894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 9022393 - 9022593
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatctttt--ctcacacaat 199  Q
    |||||| ||||||||||||||||||| |||| ||||||| ||||||||||| ||||||| |||||||||          ||| |||||  ||||||||||    
T  9022393 ttgttttaaaatgaatgtcactttacgtttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttttctcacacaat 9022492  T
Q  200 tttcaatgcaacttt-aattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    ||||||||||||||| || |||||||||||| ||||||  ||| ||||||| ||||||||||||| || |||||||| ||||||| |||| |||||||||    
T  9022493 tttcaatgcaacttttaagtttgtctttttcatataaaacaagtgcagtttagtaaaagtgttatgtctaatgattaattcattccattttttaatctgt 9022592  T
Q  299 g 299  Q
    |    
T  9022593 g 9022593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 114 - 263
Target Start/End: Original strand, 16208951 - 16209102
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttt--tctcacacaattttcaatgcaac 211  Q
    |||||||||||||||||||||||||||  ||||||| ||||||||||| |||  ||||||||||||  || ||||  ||||||| |||||||||||||||    
T  16208951 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttaaattttaccctctacaacttttctctcacataattttcaatgcaac 16209050  T
Q  212 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||| |||||||||||| |||||| ||||| ||| ||  ||||||||||||    
T  16209051 tttaagtttgtctttttcctataaaataaggacagattaataaaagtgttat 16209102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 110 - 282
Target Start/End: Original strand, 22601133 - 22601315
Alignment:
Q  110 tttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc----------cccatcttt-tctcacacaa 198  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||| |||||||||          || | |||| ||||||| ||    
T  22601133 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattgtttc-ttccaactttaccctcgataaatactccaacctttctctcacagaa 22601231  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||||||||||||||| ||||||||||||||||||||||| | || ||| ||||||| ||||| || |||||||||||||||    
T  22601232 ttttcaatgcaactttaagtttgtctttttcttataaagtaaagacaatttagtaaaagagttatgtctaatgattatttcatt 22601315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 111 - 271
Target Start/End: Complemental strand, 29931386 - 29931224
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacaca--attttcaatgc 208  Q
    |||||| ||||| ||| |||||||||||||| ||||||| ||||||||||| |||| || ||||| ||| | | |||||||| ||||  |||||||||||    
T  29931386 ttgttttaaaataaatatcactttacatttccaatacaactttaatttttttcttctaactttactctctcaaacttttctctcacataattttcaatgc 29931287  T
Q  209 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 271  Q
    |||||||||||| ||||| ||||||||| ||| ||||||||  |||||||||||||| |||||    
T  29931286 aactttaattttttctttctcttataaaataaaggcagtttaataaaagtgttatattcaatg 29931224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 116 - 299
Target Start/End: Complemental strand, 32326875 - 32326680
Alignment:
Q  116 tcaaaatgaatgtcactttacatttctaatacaattttaatt-ttttccttccaattttacc-----------ctccccatcttttctcacacaattttc 203  Q
    ||||||| |||||||||||||||||  ||||||| ||||||| |||||||| ||||||||||           ||||   | ||||||||||||||||||    
T  32326875 tcaaaataaatgtcactttacattttcaatacaactttaatttttttcctttcaattttacccacaataaatactccaacttttttctcacacaattttc 32326776  T
Q  204 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||||||||||| |||||||||||| ||||||  ||||||||||| ||||||||||||  || |||||||||||||||  ||| |||||||||||    
T  32326775 aatgcaactttaaatttgtctttttcatataaaacaagggcagtttagtaaaagtgttacgtctaatgattatttcatttcattccttaatctgtg 32326680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 111 - 298
Target Start/End: Original strand, 36915365 - 36915561
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcacacaattt 201  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| |||||| ||          | |  |||| || ||||||||    
T  36915365 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatattcaacattttttctcacaattt 36915464  T
Q  202 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    ||||||||||||||| |||||||||||| ||||||  ||||||| ||| |||||| | |||| || |||||||||||||||| ||| ||||||||||    
T  36915465 tcaatgcaactttaagtttgtctttttcatataaaacaagggcaatttagtaaaaatattatgtctaatgattatttcattccattccttaatctgt 36915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 6839294 - 6839404
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    ||||||| |||||||||||||| ||||  ||||||||||||||||||||||| |||| ||| ||||||||||||| || |||||||||||||||| ||||    
T  6839294 tctcacataattttcaatgcaattttatgtttgtctttttcttataaagtaaaggcaatttagtaaaagtgttatgtctaatgattatttcattccattt 6839393  T
Q  289 cttaatctgtg 299  Q
     ||||||||||    
T  6839394 tttaatctgtg 6839404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 41414838 - 41415012
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca--tcttttctcacacaattttcaat 206  Q
    |||| ||| ||||| |||||||||||| |||| |||||  | ||||||||||| |||||||||||||| ||| ||  | |||||||||||||||||||||    
T  41414838 atttattttaaaataaatgtcactttatatttttaatatcactttaatttttttcttccaattttaccttcctcaacttttttctcacacaattttcaat 41414937  T
Q  207 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||||||||||  || |  |||| ||||||| ||||||||| || ||||||||||||  || |||||||||||||||    
T  41414938 gcaactttaagcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttcatt 41415012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 11336098 - 11335994
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||| |||| ||| ||||||  ||||    
T  11336098 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa------tttagtaaaagtgttatatcgaatggttacttcattacattt 11336005  T
Q  289 cttaatctgtg 299  Q
    |||||||||||    
T  11336004 cttaatctgtg 11335994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 34168355 - 34168224
Alignment:
Q  116 tcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcccca-----tcttttctcacacaattttcaatgcaa 210  Q
    |||||||||||||||||||||||||  ||||||| ||||| ||||| ||||||| |||||||||   |     |||| ||||||||||||||||||||||    
T  34168355 tcaaaatgaatgtcactttacattttcaatacaactttaacttttttcttccaactttaccctcaagaaatactcttctctcacacaattttcaatgcaa 34168256  T
Q  211 ctttaattttgtctttttcttataaagtaagg 242  Q
    |||||| |||||||| ||||||||||||||||    
T  34168255 ctttaagtttgtcttgttcttataaagtaagg 34168224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 111 - 263
Target Start/End: Complemental strand, 14541900 - 14541737
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt--tctcacacaat 199  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| |||         |  || ||||  |||| ||||||    
T  14541900 ttgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttatccttaataaatacttcaacttttctctctcacaat 14541801  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    ||||||||||||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  14541800 tttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaattgttat 14541737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 296
Target Start/End: Original strand, 7129302 - 7129476
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaactt 213  Q
    |||||||||||||||||||||||||||  ||| ||| ||||||||||| ||||||| ||| |             ||||||||||||| |||||||||||    
T  7129302 tttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaacttttc-------------tctcacacaatttccaatgcaactt 7129388  T
Q  214 taattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgat-----tatttcattcaatttcttaatct 296  Q
    |||||||||||| ||||||||||||||   |||||| ||||||| ||||||| |||||||     |||||||||| ||||||||||||    
T  7129389 taattttgtcttattcttataaagtaaaatcagtttagtaaaagcgttatattcaatgattatactatttcattccatttcttaatct 7129476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 265
Target Start/End: Complemental strand, 18666672 - 18666534
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaactt 213  Q
    |||||||||||||||||||||||||||| ||| ||| |||| |||||| ||||||| ||| |             |||||||||||||| ||||||||||    
T  18666672 tttcaaaatgaatgtcactttacatttccaatgcaactttagtttttttcttccaacttttc-------------tctcacacaatttttaatgcaactt 18666586  T
Q  214 taattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 265  Q
    || | |||||||||||||||||||||||| |||||| |||||||||||||||    
T  18666585 tagtgttgtctttttcttataaagtaaggacagtttagtaaaagtgttatat 18666534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 103 - 232
Target Start/End: Complemental strand, 2803400 - 2803268
Alignment:
Q  103 taaacaatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc---cttccaattttaccctccccatcttttctcacacaat 199  Q
    |||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||   || |||| ||||||||||   | || |||  ||||||    
T  2803400 taaaaaatttgtttcaaaataaatgtcactttacattttcaatacaattttaattttttctccctcccaactttaccctccaacttttctcttgcacaat 2803301  T
Q  200 tttcaatgcaactttaattttgtctttttctta 232  Q
    ||||||| ||||||||| |||||||||||||||    
T  2803300 tttcaattcaactttaagtttgtctttttctta 2803268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 112 - 282
Target Start/End: Original strand, 30788934 - 30789115
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctcacaca--att 200  Q
    ||||| ||||| ||||||||||||||| |  ||||||| ||||||||||| |||| || ||||||||         | ||| |||||||| ||||  |||    
T  30788934 tgttttaaaataaatgtcactttacatattcaatacaactttaatttttttcttctaactttacccttagtaaatactccaacttttctctcacataatt 30789033  T
Q  201 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||| ||||||||| ||||||||||||||||||||||||| || |||  |||||||||||| || |||||||||||||||    
T  30789034 ttcaatacaactttaaatttgtctttttcttataaagtaaggacaatttaataaaagtgttatgtctaatgattatttcatt 30789115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 8471279 - 8471399
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    ||||||||||||||||||| ||||||||||| ||| ||| ||||||||||| ||||||| ||| | |||           ||||||||||||||||||||    
T  8471279 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttccaacttttctctc-----------tcacacaattttcaatgcaa 8471367  T
Q  211 ctttaattttgtctttttcttataaagtaagg 242  Q
    |||||| |||||||||||||||||||||||||    
T  8471368 ctttaagtttgtctttttcttataaagtaagg 8471399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 197 - 298
Target Start/End: Original strand, 32737861 - 32737961
Alignment:
Q  197 aattttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 295  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||   |||||||||||||| |||||| |||||||||||||||||||||    
T  32737861 aattttcaatgcaa-tttaagtttttctttttcttataaagtaaagggcagtttaacaaaagtgttatatctaatgat-atttcattcaatttcttaatc 32737958  T
Q  296 tgt 298  Q
    |||    
T  32737959 tgt 32737961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 24732079 - 24732144
Alignment:
Q  233 taaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  24732079 taaagtaggggcagtttagtaaaagtgttatatccaatgactatttcattcaatttcttaatctgt 24732144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 282
Target Start/End: Complemental strand, 41790268 - 41790113
Alignment:
Q  115 ttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctccccatcttttctcacacaattttcaatgcaactt 213  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  ||| ||| ||| |             |||||||||||||||||| ||||||    
T  41790268 ttcaaaatgaatgtcactttacatttctaatacaactttaattttttttctttcaacttttc-------------tctcacacaattttcaatccaactt 41790182  T
Q  214 taattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    ||| |||||||||||||||||||| || | || |||  ||||||| |||| || |||||||||||||||    
T  41790181 taaatttgtctttttcttataaagcaaagacaatttaataaaagtattatgtctaatgattatttcatt 41790113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 189 - 299
Target Start/End: Original strand, 11257627 - 11257736
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||| || ||||| |||||| |||| | |  ||| |||||||||||| ||||    
T  11257627 tctcacacaattttcaatgcaactttaagtttgtctgtttcttataaaataaaggtagtttagtaaaaatgtt-tttttaataattatttcattccattt 11257725  T
Q  289 cttaatctgtg 299  Q
    |||||| ||||    
T  11257726 cttaatttgtg 11257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 156239 - 156358
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctcacacaattttcaatgcaa 210  Q
    ||||||||||||||||||||||||||||| | |||| || ||||||||||| || |||| |||||  ||| | | || |||| ||||||||||||| |||    
T  156239 ttgtttcaaaatgaatgtcactttacattcccaatataactttaatttttttctcccaactttactttccac-ttttctctcgcacaattttcaatacaa 156337  T
Q  211 ctttaattttgtctttttctt 231  Q
    |||||| |||||| |||||||    
T  156338 ctttaagtttgtccttttctt 156358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 26438970 - 26439102
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctccccatcttttctc--acacaattttca 204  Q
    ||||| ||| |||||||||| ||||||||||||| | ||||| |||||||||||  ||||||| |||| |||| | | ||||||||  ||||||||||||    
T  26438970 aatttattttaaaatgaatgccactttacatttcca-tacaactttaattttttttcttccaactttatcctctcaaacttttctctcacacaattttca 26439068  T
Q  205 atgcaactttaattttgtctttttcttataaagtaa 240  Q
    |||||||||||| ||||  ||||| |||||||||||    
T  26439069 atgcaactttaagtttg--tttttgttataaagtaa 26439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 113 - 241
Target Start/End: Complemental strand, 34461737 - 34461595
Alignment:
Q  113 gtttcaaaatgaatgtcactttacatttctaatacaattttaatt-ttttccttccaattttaccct---------ccccatcttt----tctcacacaa 198  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||||| ||||||||         | ||| ||||    ||||||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaaaactccaacttttctgtctcacacaa 34461638  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaag 241  Q
    |||||||||||||||||| |||||||| ||| | |||||||||    
T  34461637 ttttcaatgcaactttaagtttgtcttgttcatgtaaagtaag 34461595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 42946120 - 42946188
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||| ||||||||||||| ||||||||| |||||||| ||||||||||| ||| |||||||||||||    
T  42946120 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttctttcaattttaccctc 42946188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 8107304 - 8107191
Alignment:
Q  121 atgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttt--tctcacacaattttcaatgcaactttaatt 218  Q
    ||||||||||||||||||||  ||||||| |||||||||||  ||  |||||||  ||| ||| ||||  ||||| ||||||||||||  |||||||| |    
T  8107304 atgaatgtcactttacattttcaatacaactttaatttttttttttaaattttattctctccaacttttctctcagacaattttcaatagaactttaaat 8107205  T
Q  219 ttgtctttttctta 232  Q
    ||||||||||||||    
T  8107204 ttgtctttttctta 8107191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 296
Target Start/End: Complemental strand, 5588517 - 5588426
Alignment:
Q  204 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||| |||||||| ||||||||||||||||||| | ||| |||||| |||||| |||||| |  |||||||||||||||  ||||||||||||    
T  5588517 aatgtaactttaagtttgtctttttcttataaattgagg-cagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatct 5588426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 113 - 179
Target Start/End: Complemental strand, 3095656 - 3095590
Alignment:
Q  113 gtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||| ||||||||||| |||||||||||  ||||||| |||||||||||||| |||| |||||||||    
T  3095656 gttttaaaatgaatgttactttacattttcaatacaactttaattttttcctcccaactttaccctc 3095590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 27416593 - 27416643
Alignment:
Q  192 cacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  27416593 cacacaattttcaatgcaattctaagtttgtctttttcttataaagtaagg 27416643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 2812915 - 2812968
Alignment:
Q  241 gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  2812915 gggcagtttagtaaaagtgttatgtctaatgattatttcattcaattacttaat 2812968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 5588628 - 5588563
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||||| ||| ||||||||| |||||||||| ||||||| ||||||||||| ||||||| ||||||    
T  5588628 ttgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 5588563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 8382625 - 8382501
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctc--acacaattttcaat 206  Q
    |||||||||||||||||||||||  ||||||| ||||||||||| ||  ||| |||||||||          ||| ||||||||  ||||||||||||||    
T  8382625 aaaatgaatgtcactttacattttcaatacaactttaatttttttctctcaactttaccctcaatatatactccaacttttctctcacacaattttcaat 8382526  T
Q  207 gcaactttaattttgtctttttctt 231  Q
    |||||| ||| ||||||||||||||    
T  8382525 gcaactataagtttgtctttttctt 8382501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 11257540 - 11257589
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttt 160  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||||||    
T  11257540 ttgttttaaaatgaatgtcactttacatttttaatacaactttaattttt 11257589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 13109076 - 13109129
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||    
T  13109076 tctcacacaatttttaatgcaaatttaaatttgtctttttcttataaaataagg 13109129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 282
Target Start/End: Original strand, 39970412 - 39970496
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||| ||||||||||||||||||||||| ||||||||||||||         ||||||||| ||||||||| ||| || |||||||||||||||    
T  39970412 tctcgcacaattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtggtatgtctaatgattatttcatt 39970496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 5044290 - 5044218
Alignment:
Q  191 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 263  Q
    |||||||||||| ||| ||||||||| ||||| ||||| |||||||||||| |||||||  ||||||| ||||    
T  5044290 tcacacaatttttaatacaactttaaatttgtattttttttataaagtaagagcagtttaataaaagtattat 5044218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 33870749 - 33870817
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    ||||| |||||||||| ||||||||||| ||||  ||||||| ||||||||||| ||||||| ||||||    
T  33870749 aatttatttcaaaatggatgtcactttatattttcaatacaactttaatttttttcttccaactttacc 33870817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 42710048 - 42709949
Alignment:
Q  195 acaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    ||||||||||| |||||||||||||| ||||||| | |||||||||||  ||||| ||  |||||| || || |||||| |||| ||| |||||||||||    
T  42710048 acaattttcaacgcaactttaattttatctttttttaataaagtaaggatagtttagt-caagtgtcatgtctaatgataattttatttaatttcttaat 42709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 27416502 - 27416548
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttt 160  Q
    |||||||||||||||||||||||||||| ||||||| |||| |||||    
T  27416502 tttcaaaatgaatgtcactttacatttccaatacaactttagttttt 27416548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 39970323 - 39970390
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||||||| |||||||||||| |||||||  ||| |||||| || |||| |||||||||    
T  39970323 ttgtttcaaaatgaatgttactttacatttccaatacaacattagtttttt-ctcccaactttaccctc 39970390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 140
Target Start/End: Original strand, 11335838 - 11335869
Alignment:
Q  109 atttgtttcaaaatgaatgtcactttacattt 140  Q
    ||||||||||||||||||||||||||||||||    
T  11335838 atttgtttcaaaatgaatgtcactttacattt 11335869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 32061578 - 32061515
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaatttta 174  Q
    |||||| |||||||||||||||||||||||   |||||| ||||||| ||| ||||||| ||||    
T  32061578 ttgttttaaaatgaatgtcactttacattttctatacaaatttaattattttcttccaacttta 32061515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 2067725 - 2067770
Alignment:
Q  115 ttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||    
T  2067725 ttcaaaatgaatgtca-tttacattttcaatacaattttaatttttt 2067770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Complemental strand, 5295556 - 5295494
Alignment:
Q  116 tcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct 178  Q
    ||||||||||||||||||||  |||||||| ||||  |||||||||| || ||||| ||||||    
T  5295556 tcaaaatgaatgtcactttaagtttctaatgcaataataattttttcttttcaattgtaccct 5295494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 299
Target Start/End: Complemental strand, 32061468 - 32061414
Alignment:
Q  245 agtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    ||||| ||||||||||||| ||  ||||||||||| |||||||||||||| ||||    
T  32061468 agtttagtaaaagtgttatgtctgatgattatttcgttcaatttcttaatatgtg 32061414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 32661392 - 32661430
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttt 227  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  32661392 tctcacacaattttcaatacaactttaagtttgtctttt 32661430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 35052469 - 35052519
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||| ||||||||||||  |||||||||| ||||||| |||||||||||    
T  35052469 ttgttttaaaatgaatgtcgttttacatttccaatacaactttaatttttt 35052519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 3095525 - 3095468
Alignment:
Q  242 ggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| |||||||||| ||||  |||||||||||||||| |||| ||||| ||||    
T  3095525 ggcagtttagtaaaagtgtcatatttaatgattatttcattctattttttaatttgtg 3095468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 32661310 - 32661371
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||| ||| |||||||  ||||||| ||||||||||| || |||| |||||||||    
T  32661310 aaaatgaatgttactctacattttcaatacaactttaatttttttctcccaactttaccctc 32661371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 13108989 - 13109037
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttctaatacaattttaattttttc 162  Q
    ||||||||||||||||| |||||||||  ||| ||| ||||||||||||    
T  13108989 tttcaaaatgaatgtcattttacattttcaatgcaactttaattttttc 13109037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 32271507 - 32271571
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttac 175  Q
    |||||| ||||||||| ||  |||||||||  |||  |||||||||||||| |||||||||||||    
T  32271507 ttgttttaaaatgaatatctttttacattttcaatgtaattttaatttttttcttccaattttac 32271571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 294
Target Start/End: Complemental strand, 1924821 - 1924634
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccccatcttttctc--acacaattttcaa 205  Q
    ||||||||| ||||||||||||| |||||||||  ||||||| |||||||||||  ||| || || |||||| ||| ||||||||  |||||||||||||    
T  1924821 aatttgttttaaaatgaatgtcattttacattttcaatacaactttaattttttttttc-aacttcaccctctccaacttttctctcacacaattttcaa 1924723  T
Q  206 tgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 294  Q
    ||||||||||||||||| |||| ||||||||||||| | ||||| ||||||  ||||||||||||||||||||||||  ||||||||||    
T  1924722 tgcaactttaattttgtattttccttataaagtaagagaagtttagtaaaaacgttatatccaatgattatttcattatatttcttaat 1924634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 111 - 282
Target Start/End: Complemental strand, 12828835 - 12828653
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctccc---------catcttttctc--acacaat 199  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||| ||||||| |||||||||           || ||||||||  |||||||    
T  12828835 ttgtttcaaaatgaatttcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacacaat 12828736  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  12828735 tttcaatgcaactttaagcttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcatt 12828653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 29915539 - 29915740
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctcc---------ccatcttttctc--acacaa 198  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||||| |||||||||          ||| ||||||||  ||||||    
T  29915539 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcacacaa 29915638  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 297  Q
    ||| |||||||||||||  ||||||||||||||||||||| || |||||||| ||||||||||||| || ||| ||||||||||||||||||||||| ||    
T  29915639 tttccaatgcaactttatgtttgtctttttcttataaagtaaatggcagtttagtaaaagtgttatttctaattattatttcattcaatttcttaatatg 29915738  T
Q  298 tg 299  Q
    ||    
T  29915739 tg 29915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 31275796 - 31275596
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctcc---------ccatctttt--ctcacacaa 198  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||||| |||||||||          ||| |||||  |||||||||    
T  31275796 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 31275697  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||  || |||| ||||||||||   || ||||||||||    
T  31275696 ttttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttggtaaaagtgttacgtctaatggttatttcatttctttccttaatctgt 31275597  T
Q  299 g 299  Q
    |    
T  31275596 g 31275596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 116 - 296
Target Start/End: Complemental strand, 26669247 - 26669056
Alignment:
Q  116 tcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcacaca--attttca 204  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||  | ||||| |||| ||||          ||| |||||||| ||||  |||||||    
T  26669247 tcaaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttca 26669148  T
Q  205 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||| |||||||||||  ||||||||||||    
T  26669147 atgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatct 26669056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 112 - 299
Target Start/End: Complemental strand, 23936735 - 23936538
Alignment:
Q  112 tgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcacacaatttt 202  Q
    ||||||||||||||||| |||||||||||  ||| ||| ||| ||||||| ||||||| |||||||||          ||| | |||||| |||||||||    
T  23936735 tgtttcaaaatgaatgttactttacattttcaatgcaactttcatttttttcttccaactttaccctcaatatatactccaacctttctctcacaatttt 23936636  T
Q  203 caatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||| ||  |||||| ||||||||| |||||||||||||||| |||||||||| ||||    
T  23936635 caatgcaactttaaatttgtttttttcttataaagtaaagggcaattcagtaaaaatgttatatctaatgattatttcattccatttcttaatatgtg 23936538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 29927205 - 29927405
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttc-cttccaattttaccctcc---------ccatcttttctcacac--aa 198  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||  ||||||| |||||||||          ||| |||||||| ||   |     
T  29927205 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcatgtag 29927304  T
Q  199 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||||||||||||| |||||||||||||||||||||||||  |  || ||||||||||||| || |||||||||||||||| |||| |||||||||    
T  29927305 ttttcaatgcaactttaagtttgtctttttcttataaagtaaggatatgttagtaaaagtgttatgtctaatgattatttcattctattttttaatctgt 29927404  T
Q  299 g 299  Q
    |    
T  29927405 g 29927405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 111 - 299
Target Start/End: Original strand, 32258720 - 32258910
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct----------ccccatctttt---ctcacaca 197  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||| |||| |||          | ||| |||||   ||||||||    
T  32258720 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaacctaaaaaaaatactccaactttttctctcacaca 32258819  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 297  Q
    |||||||||||||||||||||||           |||||| ||||||||||| ||||||| |||||||||||||||||||||| || |||||||||||||    
T  32258820 attttcaatgcaactttaatttt-----------ataaagcaagggcagtttagtaaaagcgttatatccaatgattatttcaatcgatttcttaatctg 32258908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 17345290 - 17345146
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    |||||| ||||||||| |||||||||||||||||||||| |||||| |||| ||||||| ||||||||         | ||| ||||    |||||||||    
T  17345290 ttgttttaaaatgaatatcactttacatttctaatacaactttaatatttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 17345191  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||| || |||||||| ||||||||||||||||    
T  17345190 attttcaatgcaacttgaagtttgtcttgttcttataaagtaagg 17345146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 193 - 294
Target Start/End: Complemental strand, 34439470 - 34439368
Alignment:
Q  193 acacaattttcaatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttctt 291  Q
    ||||||||| |||||||||||||  ||||||||||||||||||| | ||||||| |||  ||||| ||||||||| |||||||||||||||  |||||||    
T  34439470 acacaatttccaatgcaactttatgtttgtctttttcttataaaataaagggcaatttaataaaaatgttatatctaatgattatttcatttcatttctt 34439371  T
Q  292 aat 294  Q
    |||    
T  34439370 aat 34439368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 4124009 - 4123941
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||| |||||||||    
T  4124009 ttgtttcaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctc 4123941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 4132129 - 4132061
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||| ||| |||||||||    
T  4132129 ttgttttaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctc 4132061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 8052343 - 8052410
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||||||| || ||||||||||||||    
T  8052343 ttgttttaaaatgaatgtcactttatatttctaatacaactttaatttttt-ctcccaattttaccctc 8052410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 11785255 - 11785189
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||    
T  11785255 ttgtttcaaaatga-tgtcactttacatttccaatacaactttaatttttt-cttccaactttaccctc 11785189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 10494827 - 10494760
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtct-ttttcttataaagtaagggcagtttggtaaa 255  Q
    ||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||| |||||    
T  10494827 tctcatacaattttcaatgcaacttaaagtttgtcttttttcttataaagtaagggtagtttagtaaa 10494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 34576633 - 34576684
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 240  Q
    |||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  34576633 tctcacacaattttcaatgcaactttaagtttgtcttgttcttgtaaagtaa 34576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 299
Target Start/End: Complemental strand, 4132008 - 4131903
Alignment:
Q  191 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttct 290  Q
    |||||||||||||||||||| || | ||||   ||||||||||||| ||| || ||||| |||||| ||||||||  ||||||||||| |||  ||||||    
T  4132008 tcacacaattttcaatgcaatttaagtttt---tttttcttataaaataaaggtagtttagtaaaaatgttatatataatgattatttaattttatttct 4131912  T
Q  291 taatctgtg 299  Q
    |||| ||||    
T  4131911 taatatgtg 4131903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 6143082 - 6143147
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||||| ||||||||||||| |||||||||| ||| ||| ||||||||||| ||||||| ||||||    
T  6143082 ttgttttaaaatgaatgtcattttacatttccaattcaactttaatttttttcttccaactttacc 6143147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 30627081 - 30627157
Alignment:
Q  103 taaacaatttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||| ||||||||||||||| |||||||||||| ||||  ||||||| ||||||||||| ||  ||| |||||||||    
T  30627081 taaaaaatttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttctctcaactttaccctc 30627157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 26189600 - 26189651
Alignment:
Q  192 cacacaattttcaatgcaactttaattttg-tctttttcttataaagtaagg 242  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||||||    
T  26189600 cacacaattttcaatgcaactttaagtttgttttttttcttataaagtaagg 26189651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 34576542 - 34576605
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaatttta 174  Q
    |||||| ||||||||| ||| |||||||||| ||||||| ||||||||||| ||||||| ||||    
T  34576542 ttgttttaaaatgaatatcattttacatttccaatacaactttaatttttttcttccaacttta 34576605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 19689991 - 19689945
Alignment:
Q  108 aatttgtttcaaaatgaatgtcactttacatttctaatacaatttta 154  Q
    ||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  19689991 aatttgttttaaaatgaatgttactttacatttctaatacaacttta 19689945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 3015919 - 3015964
Alignment:
Q  116 tcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||    
T  3015919 tcaaaatgaatgtcactttacattttcaatacaactttaatttttt 3015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 6140598 - 6140662
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||||| |||||||||||| ||||||||||| ||| ||| ||||||||||| ||||||| ||||||    
T  6140598 ttgttttaaaatgaatgtcgctttacatttccaattcaactttaatttttt-cttccaactttacc 6140662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 25932718 - 25932771
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||||||||||||| |||||||| |||||||| ||  ||||||||||||    
T  25932718 tctcacacaattttcaatgtaactttaagtttgtcttgttgctataaagtaagg 25932771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 176
Target Start/End: Complemental strand, 34439567 - 34439503
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttacc 176  Q
    |||||||||||||||||||| |||||||||| ||||||| ||| ||| ||| ||||||| ||||||    
T  34439567 ttgtttcaaaatgaatgtcattttacatttccaatacaactttcattcttt-cttccaactttacc 34439503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 26189506 - 26189574
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||||||||||||||||   |||||||||| ||| ||| |||||| |||| ||||||| |||||||||    
T  26189506 ttgtttcaaaatgaatgttgttttacatttccaatgcaactttaatatttttcttccaactttaccctc 26189574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 242
Target Start/End: Original strand, 6992508 - 6992543
Alignment:
Q  207 gcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||| |||||||||||||||||||||||||    
T  6992508 gcaactttaagtttgtctttttcttataaagtaagg 6992543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 142
Target Start/End: Original strand, 19416857 - 19416888
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttct 142  Q
    ||||||||||||||||||||||||||||||||    
T  19416857 ttgtttcaaaatgaatgtcactttacatttct 19416888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 282
Target Start/End: Original strand, 30627184 - 30627262
Alignment:
Q  195 acaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 282  Q
    |||||||||||||||||||||| ||||| ||||||||         || || ||| |||||||||||||||| |||||||||||||||    
T  30627184 acaattttcaatgcaactttaaatttgtttttttctt---------ggacactttagtaaaagtgttatatctaatgattatttcatt 30627262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 177
Target Start/End: Complemental strand, 10494916 - 10494850
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccc 177  Q
    |||||| ||||||||||||| |||||||||| ||| ||| ||||||||||| ||| ||| ||| |||    
T  10494916 ttgttttaaaatgaatgtcagtttacatttccaattcaactttaatttttttctttcaactttgccc 10494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 19689858 - 19689809
Alignment:
Q  243 gcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 292  Q
    ||||||| |||||| ||||||||| ||| |||||||||||| ||||||||    
T  19689858 gcagtttagtaaaattgttatatctaataattatttcattccatttctta 19689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 29399944 - 29400013
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc 180  Q
    ||||||||||||||||||||||||   |||| ||| ||||  |||||||||| || ||||| ||||||||    
T  29399944 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctcc 29400013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 294
Target Start/End: Complemental strand, 4123918 - 4123815
Alignment:
Q  191 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgatt-atttcattcaatttc 289  Q
    |||||||||||||||||||| ||||| ||||| |||| |||||||| |||||  |||||  ||||| | |||| |  ||||||| |||| |||| |||||    
T  4123918 tcacacaattttcaatgcaa-tttaagtttgttttttccttataaaataaggatagtttaataaaattattatgtgtaatgattaatttaattctatttc 4123820  T
Q  290 ttaat 294  Q
    |||||    
T  4123819 ttaat 4123815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 116 - 296
Target Start/End: Original strand, 1546 - 1737
Alignment:
Q  116 tcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctcc---------ccatcttttctcacaca--attttca 204  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||  | ||||| |||| ||||          ||| |||||||| ||||  |||||||    
T  1546 tcaaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttca 1645  T
Q  205 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||| |||||||||||  ||||||||||||    
T  1646 atgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatct 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 1689 - 1768
Alignment:
Q  217 ttttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||  ||||||||||||    
T  1689 ttttgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatct 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 9428 - 9507
Alignment:
Q  217 ttttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 296  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||  ||||||||||||    
T  9428 ttttgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatct 9507  T

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Target: scaffold0580; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 1642 - 1691
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttc--taatacaattttaatttttt 161  Q
    ||||||||||||||||||||||||||||   ||||||| |||||||||||    
T  1642 tttcaaaatgaatgtcactttacatttccaaaatacaactttaatttttt 1691  T

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Target: scaffold0580; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 9381 - 9430
Alignment:
Q  114 tttcaaaatgaatgtcactttacatttc--taatacaattttaatttttt 161  Q
    ||||||||||||||||||||||||||||   ||||||| |||||||||||    
T  9381 tttcaaaatgaatgtcactttacatttccaaaatacaactttaatttttt 9430  T

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Target: scaffold0238 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 299
Target Start/End: Complemental strand, 16104 - 15995
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 288  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||||| || ||||| |||||| ||||||||  ||||||||||||||| |||||    
T  16104 tctcacacaattttcaatgcaactttaagtttgtcatttt-ttataaagtaaaggtagtttagtaaaaatgttatatataatgattatttcatttaattt 16006  T
Q  289 cttaatctgtg 299  Q
     ||||| ||||    
T  16005 tttaatatgtg 15995  T

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Target: scaffold0238; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 16186 - 16125
Alignment:
Q  118 aaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    ||||| |||||| ||||| |||| |||||||| ||||||||||| |||| || |||||||||    
T  16186 aaaataaatgtctctttatatttttaatacaactttaatttttttcttcaaactttaccctc 16125  T

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Target: scaffold0886 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 4263 - 4063
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt--tctcacacaat 199  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||||||||| ||||||| |||| |||         | ||| ||||  ||||||| |||    
T  4263 ttgttttaaaataaatgttactttacatttctaatacaattttaatttttttcttccaactttatcctcaataaatactccaacttttctctcacataat 4164  T
Q  200 tttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 298  Q
    |||||||  |||||||| |||||| ||||| ||||||||||||| || ||| |||||| |||||| |  ||||||| |||||||| |||||||||| |||    
T  4163 tttcaatcaaactttaagtttgtcattttttttataaagtaaggacaatttcgtaaaaatgttatgtataatgattgtttcattccatttcttaatatgt 4064  T
Q  299 g 299  Q
    |    
T  4063 g 4063  T

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Target: scaffold0047 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 70609 - 70465
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttt----tctcacaca 197  Q
    ||||||||||||||||||||||||||||||  ||| ||| ||||||||||| ||||||| ||||||||         | ||| ||||    |||||||||    
T  70609 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 70510  T
Q  198 attttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||    
T  70509 attttcaatacaactttaagtttgtatttttcttataaagtaagg 70465  T

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Target: scaffold0189 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 111 - 299
Target Start/End: Complemental strand, 13213 - 13023
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccct---------ccccatcttttctc--acacaat 199  Q
    |||||| |||||||| ||||||||||||||| ||||||||||||||||||| || |||| ||||||||         |  || ||||||||   ||||||    
T  13213 ttgttttaaaatgaacgtcactttacatttccaatacaattttaatttttttctcccaactttaccctcaataaatacttcaacttttctccggcacaat 13114  T
Q  200 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| ||||||||||||||||||||||||          ||| ||| ||||||||||||| || |||||||||||||||  ||| |||||||||||    
T  13113 tttcaatgtaactttaattttgtctttttctta---------agcattttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctgtg 13023  T

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Target: scaffold0194 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 8277 - 8346
Alignment:
Q  230 ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 299  Q
    |||||||| ||||||||||| |||||||  |||||||||||||||||||||||| |||| ||||||||||    
T  8277 ttataaagcaagggcagtttagtaaaagccttatatccaatgattatttcattccattttttaatctgtg 8346  T

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Target: scaffold0194; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 8156 - 8206
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaatttttt 161  Q
    |||||||||||||||||||| |||||||||  ||||||| |||||||||||    
T  8156 ttgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttt 8206  T

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Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 179
Target Start/End: Original strand, 321724 - 321792
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaattttttccttccaattttaccctc 179  Q
    |||||| |||||||||||| ||||||||||| ||||||| ||||||||||| ||||||| |||||||||    
T  321724 ttgttttaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctc 321792  T

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Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 242
Target Start/End: Original strand, 321815 - 321868
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 242  Q
    |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  321815 tctcacacaattttcaatgcaattttaagtttgtcttgttcctataaagtaagg 321868  T

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Target: scaffold0519 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 7852 - 7803
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaa-ttttaattttt 160  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  7852 ttgttttaaaatgaatgtcactttacattt-taatacaacttttaattttt 7803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 222
Target Start/End: Complemental strand, 7765 - 7732
Alignment:
Q  189 tctcacacaattttcaatgcaactttaattttgt 222  Q
    |||||||||||||||||||||||||||| |||||    
T  7765 tctcacacaattttcaatgcaactttaagtttgt 7732  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 231
Target Start/End: Original strand, 158195 - 158229
Alignment:
Q  197 aattttcaatgcaactttaattttgtctttttctt 231  Q
    |||||||||||||||||||| ||||||||||||||    
T  158195 aattttcaatgcaactttaagtttgtctttttctt 158229  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 31623 - 31667
Alignment:
Q  111 ttgtttcaaaatgaatgtcactttacatttctaatacaattttaa 155  Q
    |||||| ||||||||||| |||||||||||| |||| ||||||||    
T  31623 ttgttttaaaatgaatgttactttacatttccaataaaattttaa 31667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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