View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5342_high_3 (Length: 391)

Name: NF5342_high_3
Description: NF5342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5342_high_3
NF5342_high_3
[»] chr1 (30 HSPs)
chr1 (41-366)||(48065444-48065778)
chr1 (174-246)||(7333638-7333710)
chr1 (174-246)||(18706969-18707041)
chr1 (174-246)||(23483168-23483240)
chr1 (174-246)||(35614509-35614581)
chr1 (174-246)||(41531061-41531133)
chr1 (114-155)||(1231601-1231642)
chr1 (114-155)||(2951762-2951803)
chr1 (114-155)||(4266173-4266214)
chr1 (114-155)||(7333739-7333780)
chr1 (114-155)||(19764940-19764981)
chr1 (114-155)||(19768258-19768299)
chr1 (174-246)||(38444326-38444396)
chr1 (114-155)||(38914143-38914184)
chr1 (114-155)||(52036436-52036477)
chr1 (174-246)||(4266072-4266144)
chr1 (174-246)||(19768157-19768229)
chr1 (115-155)||(41530992-41531032)
chr1 (115-155)||(52687508-52687548)
chr1 (174-246)||(52687577-52687649)
chr1 (116-155)||(35613860-35613899)
chr1 (116-155)||(35614610-35614649)
chr1 (114-155)||(18706899-18706940)
chr1 (114-155)||(23483098-23483139)
chr1 (174-246)||(1231500-1231572)
chr1 (174-246)||(2951832-2951904)
chr1 (174-246)||(19765010-19765082)
chr1 (174-246)||(38914213-38914285)
chr1 (115-155)||(39727772-39727812)
chr1 (232-307)||(48098496-48098577)
[»] chr3 (30 HSPs)
chr3 (174-253)||(49477892-49477971)
chr3 (174-246)||(31488104-31488176)
chr3 (174-246)||(45558349-45558421)
chr3 (174-253)||(24118894-24118973)
chr3 (114-155)||(4584828-4584869)
chr3 (114-155)||(12263991-12264032)
chr3 (114-155)||(20671042-20671083)
chr3 (114-155)||(21098095-21098136)
chr3 (114-155)||(34121147-34121188)
chr3 (114-155)||(38654324-38654365)
chr3 (114-155)||(49478000-49478041)
chr3 (114-155)||(49506732-49506773)
chr3 (114-155)||(49672354-49672395)
chr3 (174-246)||(26948464-26948536)
chr3 (174-246)||(36076917-36076989)
chr3 (115-155)||(39146239-39146279)
chr3 (114-155)||(26052475-26052516)
chr3 (114-155)||(26948565-26948606)
chr3 (114-155)||(45558279-45558320)
chr3 (114-155)||(55041984-55042025)
chr3 (115-155)||(3898214-3898254)
chr3 (174-246)||(4584898-4584970)
chr3 (174-246)||(20670941-20671013)
chr3 (174-246)||(21097994-21098066)
chr3 (174-246)||(34121046-34121118)
chr3 (174-246)||(38654394-38654466)
chr3 (115-155)||(43364008-43364048)
chr3 (174-246)||(43364077-43364149)
chr3 (174-246)||(49506802-49506874)
chr3 (174-246)||(55042054-55042126)
[»] chr8 (42 HSPs)
chr8 (288-366)||(23354157-23354235)
chr8 (174-246)||(11724881-11724953)
chr8 (174-246)||(18841618-18841690)
chr8 (174-246)||(24408568-24408640)
chr8 (174-246)||(39257127-39257199)
chr8 (174-246)||(40026522-40026594)
chr8 (114-155)||(996211-996252)
chr8 (114-155)||(6299416-6299457)
chr8 (114-155)||(10477729-10477770)
chr8 (114-155)||(11724982-11725023)
chr8 (114-155)||(18175173-18175214)
chr8 (114-155)||(24408671-24408712)
chr8 (114-155)||(30474279-30474320)
chr8 (114-155)||(32111257-32111298)
chr8 (114-155)||(39997456-39997497)
chr8 (114-155)||(40026623-40026664)
chr8 (114-155)||(44832583-44832624)
chr8 (114-155)||(44836410-44836451)
chr8 (114-155)||(44836700-44836741)
chr8 (174-246)||(11142156-11142228)
chr8 (174-246)||(18568592-18568664)
chr8 (115-155)||(18997492-18997532)
chr8 (175-246)||(19240355-19240426)
chr8 (116-155)||(19240456-19240495)
chr8 (175-246)||(19313539-19313610)
chr8 (116-155)||(19313640-19313679)
chr8 (288-366)||(19240228-19240306)
chr8 (288-366)||(19313412-19313490)
chr8 (117-155)||(39257228-39257266)
chr8 (114-155)||(11142257-11142298)
chr8 (114-155)||(18210975-18211016)
chr8 (114-155)||(18568693-18568734)
chr8 (114-155)||(19412628-19412669)
chr8 (114-155)||(28582653-28582694)
chr8 (114-155)||(35122711-35122752)
chr8 (174-246)||(39997357-39997427)
chr8 (174-246)||(6299486-6299558)
chr8 (174-246)||(10477628-10477700)
chr8 (174-246)||(18997391-18997463)
chr8 (115-155)||(25875694-25875734)
chr8 (174-246)||(30474349-30474421)
chr8 (174-246)||(44832653-44832725)
[»] chr4 (31 HSPs)
chr4 (288-366)||(50230299-50230377)
chr4 (114-155)||(54624755-54624796)
chr4 (174-246)||(45782877-45782949)
chr4 (174-246)||(45977460-45977532)
chr4 (174-246)||(48118998-48119070)
chr4 (174-246)||(52098656-52098728)
chr4 (174-246)||(52434315-52434387)
chr4 (114-155)||(12090856-12090897)
chr4 (114-155)||(14148757-14148798)
chr4 (114-155)||(16918284-16918325)
chr4 (114-155)||(30825318-30825359)
chr4 (114-155)||(31966365-31966406)
chr4 (114-155)||(39058748-39058789)
chr4 (114-155)||(47143196-47143237)
chr4 (114-155)||(52098586-52098627)
chr4 (114-155)||(52434416-52434457)
chr4 (174-246)||(31628917-31628989)
chr4 (115-155)||(37591197-37591237)
chr4 (115-155)||(44376474-44376514)
chr4 (174-246)||(50230179-50230251)
chr4 (174-253)||(16905414-16905493)
chr4 (114-155)||(16905344-16905385)
chr4 (114-155)||(31628847-31628888)
chr4 (114-155)||(45977390-45977431)
chr4 (174-246)||(12090926-12090998)
chr4 (174-246)||(16918354-16918426)
chr4 (174-246)||(31966435-31966507)
chr4 (115-155)||(41386918-41386958)
chr4 (114-154)||(45782807-45782847)
chr4 (115-155)||(53143661-53143701)
chr4 (174-246)||(54624654-54624726)
[»] chr2 (26 HSPs)
chr2 (114-155)||(42441752-42441793)
chr2 (174-246)||(26231722-26231794)
chr2 (174-246)||(34008177-34008249)
chr2 (174-253)||(42054937-42055015)
chr2 (114-155)||(6120343-6120384)
chr2 (114-155)||(16214617-16214658)
chr2 (114-155)||(18351343-18351384)
chr2 (114-155)||(20597499-20597540)
chr2 (114-155)||(31423800-31423841)
chr2 (114-155)||(34008107-34008148)
chr2 (114-155)||(36279849-36279890)
chr2 (114-155)||(41663028-41663069)
chr2 (114-155)||(41664302-41664343)
chr2 (174-246)||(18351242-18351314)
chr2 (174-246)||(31423699-31423771)
chr2 (174-246)||(36279919-36279991)
chr2 (174-246)||(41664201-41664273)
chr2 (115-155)||(42055044-42055084)
chr2 (115-155)||(44901874-44901914)
chr2 (114-155)||(19597052-19597093)
chr2 (114-155)||(26231653-26231694)
chr2 (174-246)||(6120242-6120314)
chr2 (174-246)||(16214516-16214588)
chr2 (174-246)||(41662927-41662999)
chr2 (174-246)||(42441651-42441723)
chr2 (174-246)||(44901773-44901845)
[»] chr7 (21 HSPs)
chr7 (174-246)||(23486897-23486969)
chr7 (114-155)||(3841038-3841079)
chr7 (114-155)||(7889776-7889817)
chr7 (114-155)||(15110056-15110097)
chr7 (114-155)||(17178634-17178675)
chr7 (114-155)||(21804968-21805009)
chr7 (114-155)||(24923874-24923915)
chr7 (114-155)||(27138924-27138965)
chr7 (114-155)||(33917343-33917384)
chr7 (114-155)||(42242550-42242591)
chr7 (114-155)||(43933939-43933980)
chr7 (174-246)||(7889846-7889918)
chr7 (174-246)||(15110126-15110198)
chr7 (115-155)||(31096491-31096531)
chr7 (114-155)||(21341613-21341654)
chr7 (174-246)||(3841108-3841180)
chr7 (174-246)||(21805038-21805110)
chr7 (174-246)||(24923773-24923845)
chr7 (174-246)||(27138994-27139066)
chr7 (115-155)||(27903809-27903849)
chr7 (174-246)||(42242620-42242692)
[»] chr6 (23 HSPs)
chr6 (174-246)||(3591862-3591934)
chr6 (174-246)||(10585195-10585267)
chr6 (114-155)||(2266560-2266601)
chr6 (114-155)||(3588940-3588981)
chr6 (114-155)||(3591963-3592004)
chr6 (114-155)||(10585125-10585166)
chr6 (114-155)||(12597661-12597702)
chr6 (114-155)||(19997456-19997497)
chr6 (114-155)||(27448442-27448483)
chr6 (114-155)||(33645734-33645775)
chr6 (174-246)||(3588839-3588911)
chr6 (174-246)||(17594508-17594580)
chr6 (173-246)||(1405898-1405971)
chr6 (114-155)||(3592688-3592729)
chr6 (114-155)||(17594609-17594650)
chr6 (174-246)||(2266459-2266531)
chr6 (174-246)||(3592587-3592659)
chr6 (174-246)||(12597731-12597803)
chr6 (174-246)||(17202123-17202195)
chr6 (115-155)||(17202224-17202264)
chr6 (174-246)||(19997355-19997427)
chr6 (115-155)||(25448541-25448581)
chr6 (174-246)||(33645633-33645705)
[»] chr5 (34 HSPs)
chr5 (174-255)||(5478880-5478962)
chr5 (114-155)||(2399336-2399377)
chr5 (114-155)||(14141503-14141544)
chr5 (114-155)||(16526703-16526744)
chr5 (114-155)||(20874480-20874521)
chr5 (114-155)||(24223560-24223601)
chr5 (114-155)||(29275416-29275457)
chr5 (114-155)||(33570704-33570745)
chr5 (114-155)||(34107734-34107775)
chr5 (114-155)||(34110442-34110483)
chr5 (114-155)||(38247261-38247302)
chr5 (114-155)||(40176909-40176950)
chr5 (174-246)||(1394946-1395018)
chr5 (174-246)||(6940964-6941036)
chr5 (115-155)||(17373561-17373601)
chr5 (174-246)||(20874379-20874451)
chr5 (115-155)||(25099632-25099672)
chr5 (115-155)||(25158721-25158761)
chr5 (174-246)||(27647620-27647692)
chr5 (115-155)||(33375556-33375596)
chr5 (114-155)||(1395783-1395824)
chr5 (114-155)||(5478991-5479032)
chr5 (114-155)||(6940894-6940935)
chr5 (115-155)||(1394877-1394917)
chr5 (174-246)||(2399406-2399478)
chr5 (115-155)||(10729839-10729879)
chr5 (174-246)||(14141574-14141646)
chr5 (115-155)||(17913534-17913574)
chr5 (115-155)||(20655441-20655481)
chr5 (174-246)||(29275316-29275387)
chr5 (174-246)||(33570774-33570846)
chr5 (174-246)||(34110341-34110413)
chr5 (174-246)||(38247331-38247403)
chr5 (174-246)||(40176808-40176880)
[»] scaffold0003 (2 HSPs)
scaffold0003 (114-155)||(38293-38334)
scaffold0003 (114-155)||(38875-38916)


Alignment Details
Target: chr1 (Bit Score: 223; Significance: 1e-123; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 41 - 366
Target Start/End: Original strand, 48065444 - 48065778
Alignment:
Q  41 tcagtgttgttttgaaacattgctttaattgtttttattagttataatcttagtgtggtcccacatttaattgctttaccgtaaattatgccctttaact 140  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  48065444 tcagtgttgttttgaaacat-gctttaattgtttttattacttattatcttagtgtggtcccacatttaattgttttaccgtaaattatgtcctttaact 48065542  T
Q  141 gtttgttgaaatgtt------acc-gtaaattatgccctta---ttctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgat 230  Q
    |||||||||||||||      ||| ||  ||   |   |||   |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  48065543 gtttgttgaaatgtttcttccacctgtttatatagattttaaaattctggtgtattttgtggtagatttctgacaaagagggttcatttctgatttcgat 48065642  T
Q  231 gaaaagtgtaatattacaaaaaataatcaacttgatggtgcaaaccattttattactataatctttcaaaattgacagagttaactattgctagcttcag 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48065643 gaaaagtgtaatattacaaaaaataatcaacttgatggtgcaaaccattttattactataatctttcaaaattgacagagttaactattgctagcttcag 48065742  T
Q  331 tataagttgtaaaagttggtatctttttaggcatgc 366  Q
    ||||||||||||||||||||||||||||||||||||    
T  48065743 tataagttgtaaaagttggtatctttttaggcatgc 48065778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 7333710 - 7333638
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  7333710 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 7333638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 18706969 - 18707041
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  18706969 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 18707041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 23483168 - 23483240
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  23483168 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 23483240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 35614581 - 35614509
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  35614581 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 35614509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 41531061 - 41531133
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  41531061 attctggtgcattttgtggtagatatttaacaaagagagttcaattctaatttggatgaaaagtgtaatatta 41531133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 1231642 - 1231601
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  1231642 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 1231601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 2951762 - 2951803
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  2951762 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 2951803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 4266214 - 4266173
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  4266214 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 4266173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 7333780 - 7333739
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  7333780 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 7333739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 19764940 - 19764981
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  19764940 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 19764981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 19768299 - 19768258
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  19768299 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 19768258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 38444396 - 38444326
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||||  | ||||||||  |||| || | |||| |||||||||||||||||||    
T  38444396 attctggtgcattttgtggtagatt--taacaaagagagttcaattctaatttggatgaaaagtgtaatatta 38444326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 38914143 - 38914184
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  38914143 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 38914184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 52036436 - 52036477
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  52036436 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 52036477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 4266144 - 4266072
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  ||||||| | |||| |||||||||||||||||||    
T  4266144 attcaggtgcattttgtggtaaatatttaacaaagagagttcatttctaatttggatgaaaagtgtaatatta 4266072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 19768229 - 19768157
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||| |||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  19768229 attctagtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 19768157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 41530992 - 41531032
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  41530992 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 41531032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 52687508 - 52687548
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  52687508 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 52687548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 52687577 - 52687649
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  || | || | |||| |||||||||||||||||||    
T  52687577 attctggtgcattttgtggtagatatttaacaaagagagtttagttctaatttggatgaaaagtgtaatatta 52687649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 35613899 - 35613860
Alignment:
Q  116 ttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  35613899 ttaccgtaaatgataccctttaactgtttgttgaaatgtt 35613860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 35614649 - 35614610
Alignment:
Q  116 ttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||| || |||||||||||||||||||||||||    
T  35614649 ttaccgtaaatgataccctttaactgtttgttgaaatgtt 35614610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 18706899 - 18706940
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||| ||||| || |||||||||||||||||||||||||    
T  18706899 ctttaccataaatgataccctttaactgtttgttgaaatgtt 18706940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 23483098 - 23483139
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||| ||||| || |||||||||||||||||||||||||    
T  23483098 ctttaccataaatgataccctttaactgtttgttgaaatgtt 23483139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 1231572 - 1231500
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  1231572 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttagatgaaaagtgtaatatta 1231500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 2951832 - 2951904
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  2951832 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 2951904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 19765010 - 19765082
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||| |||||||||||||||||| | |  |||||||  |||| || | |||| |||||||||||||||||||    
T  19765010 attctagtgcattttgtggtagatatttagcaaagagagttcagttctaatttggatgaaaagtgtaatatta 19765082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 38914213 - 38914285
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  38914213 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 38914285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 39727812 - 39727772
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  39727812 tttaccgtaaatgatacactttaactgtttgttgaaatgtt 39727772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 48098496 - 48098577
Alignment:
Q  232 aaaagtgtaatattacaaaaaa--taatcaa-cttgatggtgcaa---accattttattactataatctttcaaaattgaca 307  Q
    ||||||||||||| || |||||  ||||||| ||||||| |||||   | ||||||||||||||||||| ||||||||||||    
T  48098496 aaaagtgtaatataaccaaaaaactaatcaagcttgatgctgcaagtcatcattttattactataatctgtcaaaattgaca 48098577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 49477971 - 49477892
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatattacaaaaaa 253  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| ||||||||||||||||||| ||||||    
T  49477971 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatattaaaaaaaa 49477892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 31488176 - 31488104
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  31488176 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 31488104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 45558349 - 45558421
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  45558349 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaattttgatgaaaagtgtaatatta 45558421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 24118973 - 24118894
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatattacaaaaaa 253  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||| ||||||||||| |||||    
T  24118973 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaaatgtaatattaccaaaaa 24118894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 4584828 - 4584869
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  4584828 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 4584869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 12264032 - 12263991
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  12264032 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 12263991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 20671083 - 20671042
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  20671083 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 20671042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 21098136 - 21098095
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  21098136 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 21098095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 34121188 - 34121147
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  34121188 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 34121147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 38654324 - 38654365
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  38654324 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 38654365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 49478041 - 49478000
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  49478041 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 49478000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 49506732 - 49506773
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  49506732 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 49506773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 49672395 - 49672354
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  49672395 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 49672354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 26948536 - 26948464
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||| |||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  26948536 attctagtgcattttgtggtagatatttaacaaagagagttcaattctaatttggatgaaaagtgtaatatta 26948464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 36076917 - 36076989
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||||||||||||||| |||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  36076917 attctggtgcattttgtagtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 36076989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 39146279 - 39146239
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  39146279 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 39146239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 26052475 - 26052516
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || | |||||||||||||||||||||||    
T  26052475 ctttaccgtaaatgatactctttaactgtttgttgaaatgtt 26052516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 26948606 - 26948565
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||  || |||||||||||||||||||||||||    
T  26948606 ctttaccgtaaacgataccctttaactgtttgttgaaatgtt 26948565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 45558279 - 45558320
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||| ||||||||||    
T  45558279 ctttaccgtaaatgataccctttaactgtttattgaaatgtt 45558320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 55041984 - 55042025
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || | |||||||||||||||||||||||    
T  55041984 ctttaccgtaaatgatacgctttaactgtttgttgaaatgtt 55042025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 3898254 - 3898214
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| ||  ||||||||||||||||||||||||    
T  3898254 tttaccgtaaatgatatcctttaactgtttgttgaaatgtt 3898214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 4584898 - 4584970
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||| |||||||||||||||||| | | ||||||||  |||| || | |||| ||||||||||| |||||||    
T  4584898 attctagtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgaaatatta 4584970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 20671013 - 20670941
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| ||||||||||||||||||| | | |||||||   |||| || | |||| |||||||||||||||||||    
T  20671013 attcaggtgcattttgtggtagatatttaacaaagaaagttcagttctaatttggatgaaaagtgtaatatta 20670941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 21098066 - 21097994
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  21098066 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 21097994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 34121118 - 34121046
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  34121118 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 34121046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 38654394 - 38654466
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  38654394 attcaggtgcattttgtggtaaatgtttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 38654466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 43364008 - 43364048
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||| ||||||||||||||    
T  43364008 tttaccgtaaatgataccctttaactatttgttgaaatgtt 43364048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 43364077 - 43364149
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  43364077 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 43364149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 49506802 - 49506874
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  49506802 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 49506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 55042054 - 55042126
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||| |||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  55042054 attcaggtgcattttatggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 55042126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 366
Target Start/End: Original strand, 23354157 - 23354235
Alignment:
Q  288 ataatctttcaaaattgacagagttaactattgctagcttcagtataagttgtaaaagttggtatctttttaggcatgc 366  Q
    |||||||||||||||||||| | |||| |||||||||||||||||  |||| ||| |||||||  || |||||||||||    
T  23354157 ataatctttcaaaattgacacaattaaatattgctagcttcagtaggagttataatagttggttgctctttaggcatgc 23354235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 11724953 - 11724881
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  11724953 attctggtgcattttgtggtagatatttaacaaagagagttcagttttaatttggatgaaaagtgtaatatta 11724881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 18841690 - 18841618
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  18841690 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 18841618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 24408640 - 24408568
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  24408640 attctggtgcattttgtggtagatatttaacaaagagagttcaattctaatttggatgaaaagtgtaatatta 24408568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 39257199 - 39257127
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  39257199 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 39257127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 40026594 - 40026522
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| |||| |||| |||||||| ||||||||||    
T  40026594 attctggtgcattttgtggtagatatttaacaaagagagttcagttataatttggatgaaaaatgtaatatta 40026522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 996211 - 996252
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  996211 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 996252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 6299416 - 6299457
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  6299416 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 6299457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 10477770 - 10477729
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  10477770 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 10477729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 11725023 - 11724982
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  11725023 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 11724982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 18175214 - 18175173
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  18175214 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 18175173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 24408712 - 24408671
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  24408712 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 24408671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 30474279 - 30474320
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  30474279 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 30474320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 32111257 - 32111298
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  32111257 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 32111298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 39997497 - 39997456
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  39997497 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 39997456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 40026664 - 40026623
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  40026664 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 40026623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 44832583 - 44832624
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  44832583 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 44832624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 44836451 - 44836410
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  44836451 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 44836410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 44836741 - 44836700
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  44836741 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 44836700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 11142228 - 11142156
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| ||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  11142228 attcaggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 11142156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 18568664 - 18568592
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | | ||||||  |||| || | |||| |||||||||||||||||||    
T  18568664 attctggtgcattttgtggtagatatttaataaagagagttcagttctaatttggatgaaaagtgtaatatta 18568592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 18997532 - 18997492
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  18997532 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 18997492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 19240426 - 19240355
Alignment:
Q  175 ttctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||||||||||||| ||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  19240426 ttctggtgcattttgcggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 19240355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 19240495 - 19240456
Alignment:
Q  116 ttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  19240495 ttaccgtaaatgatgccctttaactgtttgttgaattgtt 19240456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 246
Target Start/End: Complemental strand, 19313610 - 19313539
Alignment:
Q  175 ttctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||||||||||||| ||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  19313610 ttctggtgcattttgcggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 19313539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 155
Target Start/End: Complemental strand, 19313679 - 19313640
Alignment:
Q  116 ttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  19313679 ttaccgtaaatgatgccctttaactgtttgttgaattgtt 19313640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 366
Target Start/End: Complemental strand, 19240306 - 19240228
Alignment:
Q  288 ataatctttcaaaattgacagagttaactattgctagcttcagtataagttgtaaaagttggtatctttttaggcatgc 366  Q
    |||||||||||||||||||| |||  | |||||||||||||||||  |||| ||| ||| |||  || |||||||||||    
T  19240306 ataatctttcaaaattgacacagtcgaatattgctagcttcagtaggagttataatagtgggttactctttaggcatgc 19240228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 366
Target Start/End: Complemental strand, 19313490 - 19313412
Alignment:
Q  288 ataatctttcaaaattgacagagttaactattgctagcttcagtataagttgtaaaagttggtatctttttaggcatgc 366  Q
    |||||||||||||||||||| |||  | |||||||||||||||||  |||| ||| ||| |||  || |||||||||||    
T  19313490 ataatctttcaaaattgacacagtcgaatattgctagcttcagtaggagttataatagtgggttactctttaggcatgc 19313412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 155
Target Start/End: Complemental strand, 39257266 - 39257228
Alignment:
Q  117 taccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||| || |||||||||||||||||||||||||    
T  39257266 taccgtaaatgataccctttaactgtttgttgaaatgtt 39257228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 11142298 - 11142257
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || | |||||||||||||||||||||||    
T  11142298 ctttaccgtaaatgatacgctttaactgtttgttgaaatgtt 11142257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 18210975 - 18211016
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| |  |||||||||||||||||||||||||    
T  18210975 ctttaccgtaaatgacaccctttaactgtttgttgaaatgtt 18211016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 18568734 - 18568693
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| ||  ||||||||||||||||||||||||    
T  18568734 ctttaccgtaaatgatatcctttaactgtttgttgaaatgtt 18568693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 19412669 - 19412628
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || | |||||||||||||||||||||||    
T  19412669 ctttaccgtaaatgatactctttaactgtttgttgaaatgtt 19412628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 28582694 - 28582653
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || ||||||||||||||||| |||||||    
T  28582694 ctttaccgtaaatgataccctttaactgtttgttaaaatgtt 28582653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 35122711 - 35122752
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||| ||||||| || |||||||||||||||||||||||||    
T  35122711 ctttatcgtaaatgataccctttaactgtttgttgaaatgtt 35122752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 39997427 - 39997357
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||| ||||  |||| || | |||| |||||||||||||||||||    
T  39997427 attctggtgcattttgtggtagatatttaacagagag--ttcagttctaatttggatgaaaagtgtaatatta 39997357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 6299486 - 6299558
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  6299486 attcaggtgcattttgtggtaaatatttaacaaagagagttcaattctaatttggatgaaaagtgtaatatta 6299558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 10477700 - 10477628
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  10477700 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 10477628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 18997463 - 18997391
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  18997463 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 18997391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 25875694 - 25875734
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||| ||||||| || |||||||||||||||||||||||||    
T  25875694 tttagcgtaaatgataccctttaactgtttgttgaaatgtt 25875734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 30474349 - 30474421
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  30474349 attcaggtgcattttgtggtaaatatttaacaaagagagttcaattctaatttggatgaaaagtgtaatatta 30474421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 44832653 - 44832725
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  44832653 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 44832725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 366
Target Start/End: Original strand, 50230299 - 50230377
Alignment:
Q  288 ataatctttcaaaattgacagagttaactattgctagcttcagtataagttgtaaaagttggtatctttttaggcatgc 366  Q
    |||||||||||||||||||| |||||| || ||||||||||||||  |||| ||| |||||||  || |||||||||||    
T  50230299 ataatctttcaaaattgacacagttaaatactgctagcttcagtaggagttataatagttggttgctctttaggcatgc 50230377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 54624796 - 54624755
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  54624796 ctttaccgtaaatgatgccctttaactgtttgttgaaatgtt 54624755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 45782877 - 45782949
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  45782877 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 45782949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 45977460 - 45977532
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  45977460 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 45977532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 48118998 - 48119070
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  48118998 attctggtgcattttgtggtagatatttaacaaagagcgttcagttctaatttggatgaaaagtgtaatatta 48119070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 52098656 - 52098728
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  52098656 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 52098728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 52434387 - 52434315
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| |||| |||| |||||||| ||||||||||    
T  52434387 attctggtgcattttgtggtagatatttaacaaagagagttcagttataatttggatgaaaaatgtaatatta 52434315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 12090856 - 12090897
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  12090856 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 12090897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 14148757 - 14148798
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  14148757 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 14148798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 16918284 - 16918325
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  16918284 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 16918325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 30825318 - 30825359
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  30825318 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 30825359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 31966365 - 31966406
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  31966365 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 31966406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 39058748 - 39058789
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  39058748 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 39058789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 47143196 - 47143237
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  47143196 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 47143237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 52098586 - 52098627
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  52098586 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 52098627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 52434457 - 52434416
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  52434457 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 52434416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 31628917 - 31628989
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | | ||||||  |||| || | |||| |||||||||||||||||||    
T  31628917 attctggtgcattttgtggtagatatttaataaagagagttcagttctaatttggatgaaaagtgtaatatta 31628989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 37591197 - 37591237
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  37591197 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 37591237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 44376474 - 44376514
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  44376474 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 44376514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 50230179 - 50230251
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||| ||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  50230179 attctggtgcatgttgtggtagatatttaacaaagagagttcacttctaatttggatgaaaagtgtaatatta 50230251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 16905414 - 16905493
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatattacaaaaaa 253  Q
    |||| ||||||||||||||||||| | | ||||||||  |||| || | |||| ||| ||||||||||||||| ||||||    
T  16905414 attcaggtgcattttgtggtagatatttaacaaagagagttcagttctaatttagattaaaagtgtaatattaaaaaaaa 16905493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 16905344 - 16905385
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||| ||||||||||    
T  16905344 ctttaccgtaaatgataccctttaactgtttattgaaatgtt 16905385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 31628847 - 31628888
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| ||  ||||||||||||||||||||||||    
T  31628847 ctttaccgtaaatgatatcctttaactgtttgttgaaatgtt 31628888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 45977390 - 45977431
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| ||  ||||||||||||||||||||||||    
T  45977390 ctttaccgtaaatgatatcctttaactgtttgttgaaatgtt 45977431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 12090926 - 12090998
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  12090926 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 12090998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 16918354 - 16918426
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  16918354 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 16918426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 31966435 - 31966507
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | | ||||||  |||| || | ||||||||||||||||||||||||    
T  31966435 attcaggtgcattttgtggtaaatatttaataaagagagttcagttctaatttcgatgaaaagtgtaatatta 31966507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 41386958 - 41386918
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||| ||||||| || |||||||||||||||||||||||||    
T  41386958 tttagcgtaaatgataccctttaactgtttgttgaaatgtt 41386918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 154
Target Start/End: Original strand, 45782807 - 45782847
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgt 154  Q
    ||||||||||||| || | ||||||||||||||||||||||    
T  45782807 ctttaccgtaaatgatactctttaactgtttgttgaaatgt 45782847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 53143661 - 53143701
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || ||||||||||||||||| |||||||    
T  53143661 tttaccgtaaatgataccctttaactgtttgtttaaatgtt 53143701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 54624726 - 54624654
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||||||| |||||||||||||| | | ||||||||  || | || | |||| |||||||||||||||||||    
T  54624726 attctggtgtattttgtggtagatatttaacaaagagagtttagttctaattttgatgaaaagtgtaatatta 54624654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 42441793 - 42441752
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  42441793 ctttaccgtaaattataccctttaactgtttgttgaaatgtt 42441752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 26231722 - 26231794
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  26231722 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 26231794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 34008177 - 34008249
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  34008177 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 34008249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 42055015 - 42054937
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatattacaaaaaa 253  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||| |||||||||    
T  42055015 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaata-tacaaaaaa 42054937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 6120384 - 6120343
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  6120384 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 6120343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 16214658 - 16214617
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  16214658 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 16214617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 18351384 - 18351343
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  18351384 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 18351343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 20597499 - 20597540
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  20597499 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 20597540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 31423841 - 31423800
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  31423841 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 31423800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 34008107 - 34008148
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  34008107 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 34008148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 36279849 - 36279890
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  36279849 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 36279890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 41663069 - 41663028
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  41663069 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 41663028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 41664343 - 41664302
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  41664343 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 41664302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 18351314 - 18351242
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  ||||||| | |||| |||||||||||||||||||    
T  18351314 attcaggtgcattttgtggtaaatatttaacaaagagagttcatttctaatttggatgaaaagtgtaatatta 18351242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 31423771 - 31423699
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||| ||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  31423771 attctggtgcattttgtgatagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 31423699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 36279919 - 36279991
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  || | || |||||| |||||||| ||||||||||    
T  36279919 attctggtgcattttgtggtagatatttaacaaagagagtttagttctgatttggatgaaaaatgtaatatta 36279991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 41664273 - 41664201
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||| |||| || | |||| |||||||||||||||||||    
T  41664273 attcaggtgcattttgtggtaaatatttaacaaagagggttcagttctaatttggatgaaaagtgtaatatta 41664201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 42055084 - 42055044
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  42055084 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 42055044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 44901914 - 44901874
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  44901914 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 44901874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 19597052 - 19597093
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || | |||||||||||||||||||||||    
T  19597052 ctttaccgtaaatgatactctttaactgtttgttgaaatgtt 19597093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 26231653 - 26231694
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||| ||||||||||||||||    
T  26231653 ctttaccgtaaatgataccctttaaatgtttgttgaaatgtt 26231694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 6120314 - 6120242
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  6120314 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 6120242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 16214588 - 16214516
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||||||||||||||  |||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  16214588 attctggtgcattttgatgtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 16214516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 41662999 - 41662927
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  41662999 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 41662927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 42441723 - 42441651
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  42441723 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 42441651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 44901845 - 44901773
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  44901845 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 44901773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000009; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 23486969 - 23486897
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  23486969 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 23486897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 3841038 - 3841079
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  3841038 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 3841079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 7889776 - 7889817
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  7889776 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 7889817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 15110056 - 15110097
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  15110056 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 15110097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 17178634 - 17178675
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  17178634 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 17178675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 21804968 - 21805009
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  21804968 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 21805009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 24923915 - 24923874
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  24923915 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 24923874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 27138924 - 27138965
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  27138924 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 27138965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 33917343 - 33917384
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  33917343 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 33917384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 42242550 - 42242591
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  42242550 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 42242591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 43933939 - 43933980
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  43933939 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 43933980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 7889846 - 7889918
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | | ||||||  |||| || | |||| |||||||||||||||||||    
T  7889846 attctggtgcattttgtggtagatatttaataaagagagttcagttctaatttggatgaaaagtgtaatatta 7889918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 15110126 - 15110198
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  || | || | |||| |||||||||||||||||||    
T  15110126 attctggtgcattttgtggtagatatttaacaaagagagttaagttctaatttggatgaaaagtgtaatatta 15110198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 31096531 - 31096491
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  31096531 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 31096491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 21341654 - 21341613
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || ||||||||||||| |||||||||||    
T  21341654 ctttaccgtaaatgataccctttaactgttagttgaaatgtt 21341613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 3841108 - 3841180
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  3841108 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 3841180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 21805038 - 21805110
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  21805038 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 21805110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 24923845 - 24923773
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||||||||||||| | |||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  24923845 attctggtgcattttattgtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 24923773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 27138994 - 27139066
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  27138994 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 27139066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 27903809 - 27903849
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||| ||||||| || |||||||||||||||||||||||||    
T  27903809 tttagcgtaaatgataccctttaactgtttgttgaaatgtt 27903849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 42242620 - 42242692
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  42242620 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 42242692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 3591934 - 3591862
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  3591934 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 3591862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 10585195 - 10585267
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  10585195 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 10585267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 2266601 - 2266560
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  2266601 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 2266560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 3588981 - 3588940
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  3588981 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 3588940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 3592004 - 3591963
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  3592004 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 3591963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 10585125 - 10585166
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  10585125 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 10585166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 12597661 - 12597702
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  12597661 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 12597702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 19997497 - 19997456
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  19997497 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 19997456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 27448483 - 27448442
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  27448483 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 27448442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 33645775 - 33645734
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  33645775 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 33645734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 3588911 - 3588839
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||||||||||||||| |||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  3588911 attctggtgcattttgttgtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 3588839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 17594580 - 17594508
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||| ||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  17594580 attctggtgcattttgtgatagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 17594508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 1405898 - 1405971
Alignment:
Q  173 tattctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||| |||||||||||| ||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  1405898 tattctagtgcattttgtgctagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 1405971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 3592729 - 3592688
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||| | || |||||||||||||||||||||||||    
T  3592729 ctttaccgtaagtgataccctttaactgtttgttgaaatgtt 3592688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 17594650 - 17594609
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || | |||||||||||||||||||||||    
T  17594650 ctttaccgtaaatgatactctttaactgtttgttgaaatgtt 17594609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 2266531 - 2266459
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  2266531 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 2266459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 3592659 - 3592587
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||| | ||||||||    
T  3592659 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaaatataatatta 3592587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 12597731 - 12597803
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  12597731 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 12597803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 17202195 - 17202123
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||||||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||| ||||||    
T  17202195 attctggtgcattttgtggtatatatttaacaaagagagttcagttctaatttggatgaaaagtgtgatatta 17202123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 17202264 - 17202224
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||| ||||| || |||||||||||||||||||||||||    
T  17202264 tttaccataaatgataccctttaactgtttgttgaaatgtt 17202224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 19997427 - 19997355
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  19997427 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 19997355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 25448581 - 25448541
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||| ||||||||||||||    
T  25448581 tttaccgtaaatgataccctttaactttttgttgaaatgtt 25448541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 33645705 - 33645633
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  33645705 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 33645633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 255
Target Start/End: Complemental strand, 5478962 - 5478880
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatt-acaaaaaata 255  Q
    |||||||||||||||||||||||| | | |||||||   |||| || | |||| |||||||||||||||||| ||||||||||    
T  5478962 attctggtgcattttgtggtagatatttaacaaagaaagttcagttctaatttggatgaaaagtgtaatattaacaaaaaata 5478880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 2399336 - 2399377
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  2399336 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 2399377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 14141503 - 14141544
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  14141503 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 14141544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 16526703 - 16526744
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  16526703 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 16526744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 20874521 - 20874480
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  20874521 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 20874480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 24223560 - 24223601
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  24223560 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 24223601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 29275457 - 29275416
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  29275457 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 29275416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 33570704 - 33570745
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  33570704 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 33570745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 34107734 - 34107775
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  34107734 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 34107775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 34110483 - 34110442
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  34110483 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 34110442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 38247261 - 38247302
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  38247261 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 38247302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 40176950 - 40176909
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  40176950 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 40176909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 1394946 - 1395018
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    ||||| |||||||||||||||||| | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  1394946 attcttgtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 1395018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 6940964 - 6941036
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  |||| || | |||| |||||||| ||||||||||    
T  6940964 attctggtgcattttgtggtagatatttaacaaagagagttcagttctaatttggatgaaaaatgtaatatta 6941036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 17373561 - 17373601
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  17373561 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 17373601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 20874451 - 20874379
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  ||||||| | |||| |||||||||||||||||||    
T  20874451 attcaggtgcattttgtggtaaatatttaacaaagagagttcatttctaatttggatgaaaagtgtaatatta 20874379  T

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Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 25099632 - 25099672
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  25099632 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 25099672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 25158721 - 25158761
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  25158721 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 25158761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 27647692 - 27647620
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  || | || | |||| |||||||||||||||||||    
T  27647692 attctggtgcattttgtggtagatatttaacaaagagagtttagttctaatttggatgaaaagtgtaatatta 27647620  T

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Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 33375596 - 33375556
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  33375596 tttaccgtaaatgataccctttaactgtttgttgaaatgtt 33375556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 1395824 - 1395783
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| ||  ||||||||||||||||||||||||    
T  1395824 ctttaccgtaaatgatatcctttaactgtttgttgaaatgtt 1395783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 5479032 - 5478991
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || ||||||||||||||| |||||||||    
T  5479032 ctttaccgtaaatgataccctttaactgtttgatgaaatgtt 5478991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 6940894 - 6940935
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||| ||||| || |||||||||||||||||||||||||    
T  6940894 ctttaccataaatgataccctttaactgtttgttgaaatgtt 6940935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 1394877 - 1394917
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||| ||||||||||||||    
T  1394877 tttaccgtaaatgataccctttaactatttgttgaaatgtt 1394917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 2399406 - 2399478
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  2399406 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 2399478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 10729839 - 10729879
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| ||  ||||||||||||||||||||||||    
T  10729839 tttaccgtaaatgatatcctttaactgtttgttgaaatgtt 10729879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 14141574 - 14141646
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  14141574 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 14141646  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 17913574 - 17913534
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||||||||||| || |||||||||||||||| ||||||||    
T  17913574 tttaccgtaaatgataccctttaactgtttgtagaaatgtt 17913534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 20655441 - 20655481
Alignment:
Q  115 tttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    |||| ||||||| || |||||||||||||||||||||||||    
T  20655441 tttagcgtaaatgataccctttaactgtttgttgaaatgtt 20655481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 29275387 - 29275316
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||||||||||||||||||||||| | | ||||||||  || | || | ||||| ||||||||||||||||||    
T  29275387 attctggtgcattttgtggtagatatttaacaaagagagtttagttctaatttc-atgaaaagtgtaatatta 29275316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 33570774 - 33570846
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  33570774 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 33570846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 34110413 - 34110341
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  34110413 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 34110341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 38247331 - 38247403
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  38247331 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 38247403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 40176880 - 40176808
Alignment:
Q  174 attctggtgcattttgtggtagatttctgacaaagaggattcatttatgatttcgatgaaaagtgtaatatta 246  Q
    |||| |||||||||||||||| || | | ||||||||  |||| || | |||| |||||||||||||||||||    
T  40176880 attcaggtgcattttgtggtaaatatttaacaaagagagttcagttctaatttggatgaaaagtgtaatatta 40176808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 38293 - 38334
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  38293 ctttaccgtaaatgataccctttaactgtttgttgaaatgtt 38334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 155
Target Start/End: Original strand, 38875 - 38916
Alignment:
Q  114 ctttaccgtaaattatgccctttaactgtttgttgaaatgtt 155  Q
    ||||||||||||  || |||||||||||||||||||||||||    
T  38875 ctttaccgtaaaggataccctttaactgtttgttgaaatgtt 38916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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