View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5345-Insertion-10 (Length: 323)
Name: NF5345-Insertion-10
Description: NF5345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5345-Insertion-10 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 8 - 323
Target Start/End: Complemental strand, 2755726 - 2755410
Alignment:
| Q |
8 |
gaacctataagagaagg-aatcaaatcagacttaggactcgttatggccaatttttacgcgccaatggagggttaccaccatggagaaactccgtcaccc |
106 |
Q |
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| T |
2755726 |
gaacctataagagaaggtaatcaaatcagacttaggactcgttatggccaatttttacgcgccaatggagggttaccaccatggagaaactccgtcacgc |
2755627 |
T |
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| Q |
107 |
atgatattccatatcgtacaaaaacgacaaattgggttctatgggacattgatcttgtcgagcttcgaccaccgccaccgaagcaaatacaagacgtccc |
206 |
Q |
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| T |
2755626 |
atgatattccatatcgtacaaaaacgacaaattgggttctatgggacattgatcttgtcgagcttcgaccaccaccaccgaagcaaatacaagacgtccc |
2755527 |
T |
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| Q |
207 |
acctattgatgttaaagatctatcttgtaccgttaactctttgtccaatcgttctcgttctccttctcctcaatctcctactctttcaaataatgatgat |
306 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2755526 |
acctattgatgttaaagatctatcttgtcccgttaactctttgtccaatcgttctcgttctccttctcctcaatctcctactctttcaaataatgatgat |
2755427 |
T |
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| Q |
307 |
ccctttggcgcaattga |
323 |
Q |
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||||||||||||||||| |
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| T |
2755426 |
ccctttggcgcaattga |
2755410 |
T |
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