View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5345_high_14 (Length: 225)
Name: NF5345_high_14
Description: NF5345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5345_high_14 |
 |  |
|
Alignment Details
Target: chr6 (Bit Score: 139; Significance: 7e-73; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 44 - 210
Target Start/End: Complemental strand, 32536814 - 32536648
Alignment:
| Q |
44 |
acacatgtactatcaaatcacaatgcatagattggtgagggcttggcttggggttcatcctcaacatatttcggactattttttgcaatttattcattac |
143 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
32536814 |
acacatgtactatcaaatcacaatgcatagattggtgagggcttggcttggggttgatcctcaacatatttcggattattttttgcaatttattcattac |
32536715 |
T |
 |
| Q |
144 |
gcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggtcctat |
210 |
Q |
| |
|
||||||||||| |||||| |||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
32536714 |
gcaggttgtttaaaattgcaaagatctttttttcatttgatttgacttcagtgtgtttgggtcctat |
32536648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 15959084 - 15959202
Alignment:
| Q |
93 |
ggggttcatcctcaacatatttcggactattttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttc |
192 |
Q |
| |
|
|||||||||||||| |||||||| ||| |||||| ||||||| |||||||||||||||| ||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
15959084 |
ggggttcatcctcagcatatttcagaccatttttcgcaatttgttcattacgcaggttgcttgaaatcgcgaagatcttttttccatttgatttggctta |
15959183 |
T |
 |
| Q |
193 |
agtgtgtttgggtcctatg |
211 |
Q |
| |
|
||||| ||||| |||||| |
|
|
| T |
15959184 |
agtgtaattgggacctatg |
15959202 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 14373289 - 14373373
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||||||||||||||||| || || ||| ||||||||| | |||| || |||||||||||||||||||||||| ||||||| |
|
|
| T |
14373289 |
attttttgcaatttattcagtatgctggtagtttgaaatcacgtcgatcattcttccatttgatttggcttcagtgtttttgggt |
14373373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 11462210 - 11462171
Alignment:
| Q |
166 |
gatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
11462210 |
gatctttatttcatttgatttggcttcagtgtgtttgggt |
11462171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 20883331 - 20883415
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||| ||||||||||| | || |||||| | ||||||| | ||||||| || ||||||||||||||||||||||| ||||| |
|
|
| T |
20883331 |
attttgtgcaatttattgaatatgcaggtggcttgaaatcccgtcgatctttatttcatttgatttggcttcagtgtgtatgggt |
20883415 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 21168067 - 21168035
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtt |
153 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
21168067 |
attttttgcaatttattaattacgcaggttgtt |
21168035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 87; Significance: 7e-42; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 26771259 - 26771377
Alignment:
| Q |
93 |
ggggttcatcctcaacatatttcggactattttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttc |
192 |
Q |
| |
|
|||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||| || |||| | |||||| ||||||||||||||||||||||| |
|
|
| T |
26771259 |
ggggttgatcctcagcatatttcggacaattttttgcaatttattcattacgcaggttgcttaaaatcgcgaagattttttttccatttgatttggcttc |
26771358 |
T |
 |
| Q |
193 |
agtgtgtttgggtcctatg |
211 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
26771359 |
agtgtgtttgggtcctatg |
26771377 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 17098163 - 17098212
Alignment:
| Q |
110 |
tatttcggactattttttgcaatttattcattacgcaggttgtttgaaat |
159 |
Q |
| |
|
|||||| ||| |||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
17098163 |
tatttcagaccatttcttgcaatttattcattacgcaggtggtttgaaat |
17098212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 19890475 - 19890436
Alignment:
| Q |
166 |
gatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
19890475 |
gatctttatttcatttgatttggcttcagtgtgtttgggt |
19890436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 48570337 - 48570416
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtt |
200 |
Q |
| |
|
||||| ||||||||||||| || |||||| | ||||||| | | ||||| | ||||| ||||||||||||||||||||| |
|
|
| T |
48570337 |
attttatgcaatttattcaatatgcaggtggcttgaaatcgcgtcgatctctcttccacttgatttggcttcagtgtgtt |
48570416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 40930826 - 40930895
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggct |
190 |
Q |
| |
|
||||||||||||||||| |||| |||||||||| || | |||| | ||||| || |||||||||||||| |
|
|
| T |
40930826 |
attttttgcaatttattaattatgcaggttgttcgagagggtgacgttctttctttcatttgatttggct |
40930895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 34333113 - 34333145
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtt |
153 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
34333113 |
attttttgcaatttattaattacgcaggttgtt |
34333145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 17765232 - 17765350
Alignment:
| Q |
93 |
ggggttcatcctcaacatatttcggactattttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttc |
192 |
Q |
| |
|
|||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
17765232 |
ggggttgatcctcaacatatttcagaccattttttgcaacttattcattacgcaggttgcttgaaatcacgaagatctttttttcatttgatttggcttc |
17765331 |
T |
 |
| Q |
193 |
agtgtgtttgggtcctatg |
211 |
Q |
| |
|
|||||||||||||| |||| |
|
|
| T |
17765332 |
agtgtgtttgggtcttatg |
17765350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 15917507 - 15917411
Alignment:
| Q |
110 |
tatttcggactattttttgcaatttattcattacgcaggttgtttg-aaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| |||||| | | | |||| | || ||||||||||||| ||| |||| ||||| ||||||||||| |
|
|
| T |
15917507 |
tatttcagaccattttttgcaatttattcattatgcaggtggctcgaaaatcgcgacgatcttttttccacttggtttgacttcaatgtgtttgggt |
15917411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 34137242 - 34137337
Alignment:
| Q |
102 |
cctcaacatatttcggactattttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgt |
197 |
Q |
| |
|
||||| ||||||| |||| |||||||||||||||||||||| |||||||||||||||| | |||| ||| ||||||||||||||||||||||| |
|
|
| T |
34137242 |
cctcagcatattttggaccattttttgcaatttattcattatgcaggttgtttgaaatcccgtagatatttgctccatttgatttggcttcagtgt |
34137337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 41665673 - 41665734
Alignment:
| Q |
127 |
tgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttgg |
188 |
Q |
| |
|
||||||||||| |||||||||||||||||| | | || ||||||| ||||| ||||||||| |
|
|
| T |
41665673 |
tgcaatttattaattacgcaggttgtttgagaaggcgacgatctttcttccacttgatttgg |
41665734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 32266406 - 32266374
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtt |
153 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
32266406 |
attttttgcaatttattaattacgcaggttgtt |
32266374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 2822335 - 2822419
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||| ||||||||||||| || |||||| | ||||||| | | ||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
2822335 |
attttatgcaatttattcaatatgcaggtggcttgaaatcgcgtcgatctttcttccacttgatttggcttcagtgtgtttgggt |
2822419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 11587483 - 11587569
Alignment:
| Q |
108 |
catatttcggactattttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcag |
194 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||| |||||| | | || || | |||||||| || |||||||||||||||||| |
|
|
| T |
11587483 |
catatttcggaccattttttgcaattcattcattatgcaggtagctcgacatcccgtagatctttatttcatttgatttggcttcag |
11587569 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 20002560 - 20002476
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||| ||||||||||| | || | |||| | |||||||| | ||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
20002560 |
attttgtgcaatttattgaatatgtaggtggcttgaaattccgtcgatctttatttcatttgatttggcttcagtgtgtttgggt |
20002476 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 205
Target Start/End: Original strand, 23162932 - 23163014
Alignment:
| Q |
123 |
tttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||||||||||||||| | || ||| ||||||||| | |||| || |||||||||||||||||||||||| ||||||| |
|
|
| T |
23162932 |
tttttgcaatttattcagcatgctggtagtttgaaatcacgtcgatcgttcttccatttgatttggcttcagtgtatttgggt |
23163014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 15740063 - 15740031
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtt |
153 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
15740063 |
attttttgcaatttattaattacgcaggttgtt |
15740031 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 19255421 - 19255488
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttgg |
188 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| || |||| || |||| |||||||| ||||||||| |
|
|
| T |
19255421 |
attttttgcaatttattaattacgcaggttgttcgagattgcgacgatcatttttccacttgatttgg |
19255488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 18359388 - 18359472
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||| ||||||||||| | ||||||||| | ||||||| | ||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
18359388 |
attttgtgcaatttattaaatacgcaggtggcttgaaatctcgtcgatctttctttcatttgatttggcttcagtgtgtttgggt |
18359472 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 26019287 - 26019365
Alignment:
| Q |
124 |
ttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttg |
202 |
Q |
| |
|
||||||||||||| || |||||||||| | ||||| | | ||||||| || |||||||||||||||||||||||||| |
|
|
| T |
26019287 |
ttttgcaatttatccaatacgcaggttttctgaaagcgcgtcgatctttatttcatttgatttggcttcagtgtgtttg |
26019365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 8227868 - 8227836
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtt |
153 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
8227868 |
attttttgcaatttattaattacgcaggttgtt |
8227836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 23238225 - 23238193
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtt |
153 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
23238225 |
attttttgcaatttattaattacgcaggttgtt |
23238193 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 27795269 - 27795241
Alignment:
| Q |
177 |
catttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
27795269 |
catttgatttggcttcagtgtgtttgggt |
27795241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 25619256 - 25619217
Alignment:
| Q |
166 |
gatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
25619256 |
gatctttatttcatttgatttggcttcagtgtgtttgggt |
25619217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 37919386 - 37919351
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttga |
156 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |
|
|
| T |
37919386 |
attttttgcaatttattaattacgcaggttgtttga |
37919351 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 11277550 - 11277582
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtt |
153 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |
|
|
| T |
11277550 |
attttttgcaatttattaattacgcaggttgtt |
11277582 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 32; Significance: 0.000000005; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 6259659 - 6259592
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttgg |
188 |
Q |
| |
|
||||||||||||||||| |||||| |||||||| || | | || | ||||||||||||||||||||| |
|
|
| T |
6259659 |
attttttgcaatttattaattacgtaggttgttcgagagggagacggtcttttttccatttgatttgg |
6259592 |
T |
 |
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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 47623367 - 47623456
Alignment:
| Q |
115 |
cggactattttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||| ||||||||||||||||||| || || ||| ||||||||| | |||| || ||||||||||||||||||| |||| ||||||| |
|
|
| T |
47623367 |
cggaccattttttgcaatttattcagtatgctggtagtttgaaatcacgtcgatcgttcttccatttgatttggcttc-gtgtatttgggt |
47623456 |
T |
 |
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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 4842239 - 4842211
Alignment:
| Q |
128 |
gcaatttattcattacgcaggttgtttga |
156 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4842239 |
gcaatttattcattacgcaggttgtttga |
4842211 |
T |
 |
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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 205
Target Start/End: Original strand, 51994026 - 51994110
Alignment:
| Q |
121 |
attttttgcaatttattcattacgcaggttgtttgaaattgtgaagatcttttttccatttgatttggcttcagtgtgtttgggt |
205 |
Q |
| |
|
||||| ||||||||||||| || || ||| ||||||| | | ||||| | ||||| |||||||||||||||||||||||||| |
|
|
| T |
51994026 |
attttatgcaatttattcaatatgctggtgccttgaaatcgcgtcgatctctcttccacttgatttggcttcagtgtgtttgggt |
51994110 |
T |
 |
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