View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5345_low_11 (Length: 323)
Name: NF5345_low_11
Description: NF5345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5345_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 21 - 310
Target Start/End: Complemental strand, 4359886 - 4359597
Alignment:
| Q |
21 |
tcattttattttatttacattattgtatattggaatgtcgaaatattagtttcaatcatttagattaattttctgtttgcattataagcatggcattgaa |
120 |
Q |
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| T |
4359886 |
tcattttattttatttacattattgtatattggaatgtcgaaatattagtttcaatcatttagattaattttctgtttgcattataagcatggcattgaa |
4359787 |
T |
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| Q |
121 |
catcataataattattttcaaactatatttattttgattattacattacacgatttgaaaaaaggagtattataaaatgtacaaaatataggtgcannnn |
220 |
Q |
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| T |
4359786 |
cttcataataattattttcaaactatatttattttgattattacattacacgatttgaaaaaaggagtattataaaatgtacaaaatataggtgcatttt |
4359687 |
T |
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| Q |
221 |
nnnatcgacttttcctaagatttttaactaaaaatacatcttcaatagttacaaaaaattgagtaatttagtttagaaccataggaaaaa |
310 |
Q |
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| T |
4359686 |
tttatcgacttttcctaagatttttaactaaaaatacatcttcaatagttacaaaaaattgagtaatttagtttaaaaccatagaaaaaa |
4359597 |
T |
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