View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5347_high_21 (Length: 252)

Name: NF5347_high_21
Description: NF5347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5347_high_21
NF5347_high_21
[»] chr5 (25 HSPs)
chr5 (4-241)||(38452573-38452811)
chr5 (4-241)||(38182264-38182501)
chr5 (4-241)||(38188630-38188867)
chr5 (4-241)||(38209490-38209727)
chr5 (50-241)||(38220590-38220780)
chr5 (4-241)||(38215855-38216092)
chr5 (4-241)||(38170099-38170337)
chr5 (4-241)||(38185888-38186124)
chr5 (4-241)||(38212233-38212469)
chr5 (4-241)||(38156187-38156421)
chr5 (4-160)||(38220217-38220373)
chr5 (50-160)||(38220372-38220482)
chr5 (50-160)||(38220481-38220591)
chr5 (4-110)||(38443747-38443853)
chr5 (59-113)||(38443718-38443772)
chr5 (59-114)||(38170070-38170125)
chr5 (59-114)||(38220188-38220243)
chr5 (180-237)||(38443919-38443973)
chr5 (59-114)||(38452785-38452840)
chr5 (78-114)||(38182475-38182511)
chr5 (78-114)||(38185878-38185914)
chr5 (78-114)||(38188620-38188656)
chr5 (78-114)||(38209701-38209737)
chr5 (78-114)||(38212443-38212479)
chr5 (78-114)||(38215845-38215881)


Alignment Details
Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 241
Target Start/End: Complemental strand, 38452811 - 38452573
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  38452811 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttccaaggtgaaggattttcacggactacatgtcgtgaatgatgaattcgaaga 38452712  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaa-ttttcttttgaagtgtagtcaaattgtacggattcaaattgatt 202  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  38452711 tattctaaaatcgttttggaagcgttgctttttgaagcctaatgtagttctctaattttttttttgaagtgtagttaaattgtacggattcaaattgatt 38452612  T
Q  203 aatatattggttcttttttatcatggatttgtctcctat 241  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38452611 aatatattggttcttttttatcatggatttgtctcctat 38452573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 241
Target Start/End: Complemental strand, 38182501 - 38182264
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| |||||    
T  38182501 atgatgaatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaaga 38182402  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgatta 203  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  38182401 tattctaaaatcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgatta 38182302  T
Q  204 atatattggttcttttttatcatggatttgtctcctat 241  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  38182301 atacattggttcttttttatcatggatttgtctcctat 38182264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 38188630 - 38188867
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| |||||    
T  38188630 atgatgaatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaaga 38188729  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgatta 203  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  38188730 tattctaaaatcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgatta 38188829  T
Q  204 atatattggttcttttttatcatggatttgtctcctat 241  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  38188830 atacattggttcttttttatcatggatttgtctcctat 38188867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 241
Target Start/End: Complemental strand, 38209727 - 38209490
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| |||||    
T  38209727 atgatgaatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaaga 38209628  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgatta 203  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  38209627 tattctaaaatcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgatta 38209528  T
Q  204 atatattggttcttttttatcatggatttgtctcctat 241  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  38209527 atacattggttcttttttatcatggatttgtctcctat 38209490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 50 - 241
Target Start/End: Original strand, 38220590 - 38220780
Alignment:
Q  50 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38220590 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttggaagtgttgctttttgaaacctaatgta 38220689  T
Q  150 gttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttcttttttatcatggatttgtctcctat 241  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38220690 gttctctaattttcttttgaagtgtagtc-aattgtacggattcaaattgattaatatattggttctattttatcatggatttgtctcctat 38220780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 38215855 - 38216092
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||| ||||| |||||| ||||| ||||||||||||||||| |||||||| |||||    
T  38215855 atgatgaatttgaagatattctaaaattatatttgaagcgcaatttttttaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaaga 38215954  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgatta 203  Q
    |||||||||||| ||||||||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  38215955 tattctaaaatcgttttggaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgatta 38216054  T
Q  204 atatattggttcttttttatcatggatttgtctcctat 241  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  38216055 atacattggttcttttttatcatggatttgtctcctat 38216092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 38170099 - 38170337
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  38170099 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttccaaggtgaaggattttcacggactgcatgtcgtgaatgatgaattcgaaga 38170198  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcact-aattttcttttgaagtgtagtcaaattgtacggattcaaattgatt 202  Q
    |||||||||||| |||||||||| ||||||||||||  |||||||||||| || ||       |||||||||||| ||||||||||||||||||||||||    
T  38170199 tattctaaaatcgttttggaagcattgctttttgaaggctaatgtagttctctaaaaaaaaaattgaagtgtagttaaattgtacggattcaaattgatt 38170298  T
Q  203 aatatattggttcttttttatcatggatttgtctcctat 241  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  38170299 aatatattggttctattttatcatggatttgtctcctat 38170337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 38185888 - 38186124
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||| |||||    
T  38185888 atgatgaatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcacggactg-atgtcgtgaacgatgaatttgaaga 38185986  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgatta 203  Q
    |||||||||||  ||||||||||||||||||||||| |||||| || ||  |||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  38185987 tattctaaaattgttttggaagcgttgctttttgaagcctaatataattttctaaattttttttgaagtgtagttaaattgtacggattcaaattgatta 38186086  T
Q  204 atatattggttcttttttatcatggatttgtctcctat 241  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  38186087 atacattggttcttttttatcatggatttgtctcctat 38186124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 4 - 241
Target Start/End: Complemental strand, 38212469 - 38212233
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    |||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||| |||||    
T  38212469 atgatgaatttgaagatattctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcacggactg-atgtcgtgaacgatgaatttgaaga 38212371  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgatta 203  Q
    |||||||||||  ||||||||||||||||||||||| |||||| || ||  |||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  38212370 tattctaaaattgttttggaagcgttgctttttgaagcctaatataattttctaaattttttttgaagtgtagttaaattgtacggattcaaattgatta 38212271  T
Q  204 atatattggttcttttttatcatggatttgtctcctat 241  Q
    ||| ||||||||||||||||||||||||||||||||||    
T  38212270 atacattggttcttttttatcatggatttgtctcctat 38212233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 4 - 241
Target Start/End: Original strand, 38156187 - 38156421
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||||||||||  |||||||||||| ||||| ||||| ||||||||||||||||||||    
T  38156187 atgatgaatttgaagatattctaaaattgtttttgaagcgcaatttttctaagaagaaggaatttcatggacttcatgttgtgaatgatgaattcgaaga 38156286  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgatta 203  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||   | ||||| ||||||||| || ||    
T  38156287 tattctaaaatcgttttggaagcgttgctttttgaagcctaatgtagttctctaatttttttttgaagtgtagt--tactgtacagattcaaatcgagta 38156384  T
Q  204 atatattggttcttttttatcatggatttgtctcctat 241  Q
    |||||||||||| |||||||||||||||||||||||||    
T  38156385 atatattggttc-tttttatcatggatttgtctcctat 38156421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 4 - 160
Target Start/End: Original strand, 38220217 - 38220373
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38220217 atgatgaatttgaagatattctaaaattttatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 38220316  T
Q  104 tattctaaaatctttttggaagcgttgctttttgaaacctaatgtagttcactaatt 160  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||    
T  38220317 tattctaaaatcgttttggaagtgttgctttttgaaacctaatgtagttctctaatt 38220373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 38220372 - 38220482
Alignment:
Q  50 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38220372 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttggaagtgttgctttttgaaacctaatgta 38220471  T
Q  150 gttcactaatt 160  Q
    |||| ||||||    
T  38220472 gttctctaatt 38220482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 50 - 160
Target Start/End: Original strand, 38220481 - 38220591
Alignment:
Q  50 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38220481 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcattttggaagtgttgctttttgaaacctaatgta 38220580  T
Q  150 gttcactaatt 160  Q
    |||| ||||||    
T  38220581 gttctctaatt 38220591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 38443747 - 38443853
Alignment:
Q  4 atgatgaatttgaagatattctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaaga 103  Q
    |||||||||||||||||||||||||| ||| ||||| | | |||||||| |||  |||||||||||| ||||| ||  ||||||| ||||||||||||||    
T  38443747 atgatgaatttgaagatattctaaaactgtttttgaagcgtaatttttcaaagaagaaggaatttcatggactacacatcgtgaacgatgaattcgaaga 38443846  T
Q  104 tattcta 110  Q
    |||||||    
T  38443847 tattcta 38443853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 113
Target Start/End: Original strand, 38443718 - 38443772
Alignment:
Q  59 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa 113  Q
    |||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  38443718 gaagcaatttcatggactgcatatcgtgaatgatgaatttgaagatattctaaaa 38443772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 38170070 - 38170125
Alignment:
Q  59 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaat 114  Q
    |||| |||||| |||||| ||||| |||||||||||||| ||||||||||||||||    
T  38170070 gaagaaatttcgcggactacatgttgtgaatgatgaatttgaagatattctaaaat 38170125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 38220188 - 38220243
Alignment:
Q  59 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaat 114  Q
    |||| |||||| |||||| |||||  ||||||||||||| ||||||||||||||||    
T  38220188 gaagaaatttcgcggactacatgttatgaatgatgaatttgaagatattctaaaat 38220243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 38443919 - 38443973
Alignment:
Q  180 aattgtacggattcaaattgattaatatattggttcttttttatcatggatttgtctc 237  Q
    ||||||| ||||||||||| |||||||||||||   ||||||||||||||| ||||||    
T  38443919 aattgtatggattcaaatttattaatatattgg---ttttttatcatggatctgtctc 38443973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 38452840 - 38452785
Alignment:
Q  59 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaat 114  Q
    |||| |||||| |||||| |||||  ||||||||||||| ||||||||||||||||    
T  38452840 gaagaaatttcgcggactacatgttatgaatgatgaatttgaagatattctaaaat 38452785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 38182511 - 38182475
Alignment:
Q  78 catgtcgtgaatgatgaattcgaagatattctaaaat 114  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38182511 catgttgtgaatgatgaatttgaagatattctaaaat 38182475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 38185878 - 38185914
Alignment:
Q  78 catgtcgtgaatgatgaattcgaagatattctaaaat 114  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38185878 catgttgtgaatgatgaatttgaagatattctaaaat 38185914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 38188620 - 38188656
Alignment:
Q  78 catgtcgtgaatgatgaattcgaagatattctaaaat 114  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38188620 catgttgtgaatgatgaatttgaagatattctaaaat 38188656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 38209737 - 38209701
Alignment:
Q  78 catgtcgtgaatgatgaattcgaagatattctaaaat 114  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38209737 catgttgtgaatgatgaatttgaagatattctaaaat 38209701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 38212479 - 38212443
Alignment:
Q  78 catgtcgtgaatgatgaattcgaagatattctaaaat 114  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38212479 catgttgtgaatgatgaatttgaagatattctaaaat 38212443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 114
Target Start/End: Original strand, 38215845 - 38215881
Alignment:
Q  78 catgtcgtgaatgatgaattcgaagatattctaaaat 114  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38215845 catgttgtgaatgatgaatttgaagatattctaaaat 38215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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