View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5347_high_8 (Length: 417)
Name: NF5347_high_8
Description: NF5347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5347_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 23 - 405
Target Start/End: Complemental strand, 22047032 - 22046650
Alignment:
| Q |
23 |
ggtgacaatcgttttggccttgatgtccagccagatgaattcaccccattgaagttaccatattatcatacatattgatatattggacttgaaccaaaac |
122 |
Q |
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| T |
22047032 |
ggtgacaatcgttttggccttgatgtccagctagatgaattcagcccattgaagttaccatattatcatacatatcgatatattggacttgaactagaac |
22046933 |
T |
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| Q |
123 |
cttttgaagtgaaacttacaatgtattatgctgagaagtataaattggttagttactttttatatctcaaactggtaattttacattcacagttcttcat |
222 |
Q |
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| T |
22046932 |
cttttgaagtgaaacttacaaagtattatgctgagaagtataaattggttagttagtttttatatctcaaactggtaattttacattcacaattcttcat |
22046833 |
T |
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| Q |
223 |
tttatttttcgtttatggttctatttgcagacattgaagaaggaatttgcaaactatattagaacttctaaatatgattatgtggaaatgtatggaccag |
322 |
Q |
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| T |
22046832 |
tttatttttcgtttatgcttctatttgcagacattgaagaaggaatttgcaaactatattagaacttctaaatatgattatgtggaaatgtatggaccag |
22046733 |
T |
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| Q |
323 |
aaggcatgaaagttgatgtcaagattcttaagagnnnnnnnnnnnnnnggacatggactgagtttggagatcactggaatatt |
405 |
Q |
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| T |
22046732 |
aaggcatggaagttgatgtcaagattcttaagagaaaaaaaggaaaaaggtcatggactgagtttggagatcactggaatatt |
22046650 |
T |
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