View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5347_high_9 (Length: 392)
Name: NF5347_high_9
Description: NF5347
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5347_high_9 |
 | |
|
| [»] chr5 (16 HSPs) |
| |
|
Alignment Details
Target: chr5 (Bit Score: 318; Significance: 1e-179; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 19 - 392
Target Start/End: Complemental strand, 38453259 - 38452886
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
38453259 |
gatcatcgtcgttattcctacatcggcggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttccatattca |
38453160 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttgga |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
38453159 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaagaagatctcaatcatatgatgttaga |
38453060 |
T |
|
| Q |
219 |
gtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
318 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
38453059 |
gtatgatcatatgtgtcacttttcacgaaagcctgcatggttgagggtcttcctcttccctgtccttgttaacaacaacaaggcatcttttgattcttta |
38452960 |
T |
|
| Q |
319 |
gcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
392 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38452959 |
acttccgtcgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
38452886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 392
Target Start/End: Complemental strand, 38182949 - 38182576
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38182949 |
gatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttca |
38182850 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttgga |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
38182849 |
tgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcga |
38182750 |
T |
|
| Q |
219 |
gtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
318 |
Q |
| |
|
|||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38182749 |
gtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttg |
38182650 |
T |
|
| Q |
319 |
gcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
392 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38182649 |
gcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctcctcctactacgcctcc |
38182576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 392
Target Start/End: Original strand, 38185440 - 38185813
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38185440 |
gatcatcgtcgttattcctacatcggcggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttca |
38185539 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttgga |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
38185540 |
tgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcga |
38185639 |
T |
|
| Q |
219 |
gtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
318 |
Q |
| |
|
|||||||| |||||||| ||||| || |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38185640 |
gtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagagtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttg |
38185739 |
T |
|
| Q |
319 |
gcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
392 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38185740 |
gcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctcctcctactacgcctcc |
38185813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 392
Target Start/End: Original strand, 38188182 - 38188555
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38188182 |
gatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttca |
38188281 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttgga |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
38188282 |
tgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcga |
38188381 |
T |
|
| Q |
219 |
gtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
318 |
Q |
| |
|
|||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38188382 |
gtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttg |
38188481 |
T |
|
| Q |
319 |
gcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
392 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38188482 |
gcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctcctcctactacgcctcc |
38188555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 392
Target Start/End: Complemental strand, 38210175 - 38209802
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38210175 |
gatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttca |
38210076 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttgga |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
38210075 |
tgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcga |
38209976 |
T |
|
| Q |
219 |
gtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
318 |
Q |
| |
|
|||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38209975 |
gtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttg |
38209876 |
T |
|
| Q |
319 |
gcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
392 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38209875 |
gcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctcctcctactacgcctcc |
38209802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 392
Target Start/End: Complemental strand, 38212917 - 38212544
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38212917 |
gatcatcgtcgttattcctacatcggcggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttca |
38212818 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttgga |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
38212817 |
tgttttccgatgtttgcttcaagtatcaactacttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcga |
38212718 |
T |
|
| Q |
219 |
gtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
318 |
Q |
| |
|
|||||||| |||||||| ||||| || |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38212717 |
gtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagagtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttg |
38212618 |
T |
|
| Q |
319 |
gcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
392 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38212617 |
gcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctcctcctactacgcctcc |
38212544 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 19 - 392
Target Start/End: Original strand, 38215407 - 38215780
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38215407 |
gatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttca |
38215506 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttgga |
218 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
38215507 |
tgttttccgatgtttgtttcaagtatcaactccttggtgaagatttggatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcga |
38215606 |
T |
|
| Q |
219 |
gtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
318 |
Q |
| |
|
|||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38215607 |
gtatgatcgtatgtgtcgcttttcacaaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttg |
38215706 |
T |
|
| Q |
319 |
gcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
392 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38215707 |
gcttccgtcgactcgctcaattccgttcaagtttttccttttgaagaatattcatctcctcctactacgcctcc |
38215780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 19 - 392
Target Start/End: Original strand, 38169651 - 38170024
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38169651 |
gatcatcttcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggcaaagctttccacgttca |
38169750 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttgga |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||| || |
|
|
| T |
38169751 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccaatttataacgaagaagatctcaatcatattatgttcga |
38169850 |
T |
|
| Q |
219 |
gtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
318 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
38169851 |
gtatgatcgtatgtgtcacttttcacgaaagcctgcatggctgagggtcttcctcttcccggtccctattaacaacaacaaggcatcttttgattctttg |
38169950 |
T |
|
| Q |
319 |
gcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
392 |
Q |
| |
|
||||||| | | |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38169951 |
gcttccgtcaaatcgctcaatttcgttcgagtttctccttttgaagaatattcatctcctcctactacgcctcc |
38170024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 19 - 323
Target Start/End: Original strand, 38443236 - 38443540
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| |
|
|
| T |
38443236 |
gatcatcgtcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctccgacctcatggcaaagctttcctcattca |
38443335 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttgga |
218 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||| || |
|
|
| T |
38443336 |
tggtttccaatgtttgcttcaagtatcaactccttggtgaagattttgatgctttgatcccagtttataacgaagaagatctcaatcatatgatgttcga |
38443435 |
T |
|
| Q |
219 |
gtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
318 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38443436 |
gtatgatcgtatgtgtcacttttcacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttg |
38443535 |
T |
|
| Q |
319 |
gcttc |
323 |
Q |
| |
|
||||| |
|
|
| T |
38443536 |
gcttc |
38443540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 203 - 392
Target Start/End: Original strand, 38219953 - 38220142
Alignment:
| Q |
203 |
atcatatgatgttggagtatgatcatatgtgtcactttttacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggc |
302 |
Q |
| |
|
||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
38219953 |
atcatatgatgttcgagtatgatcgtatgtgtcgcttttcacgaaagcctgcatggttgagggtcttcctcttcccggtccctattaacaacaacaaggc |
38220052 |
T |
|
| Q |
303 |
atcttttgattctttggcttccgccgactcgctcaattccgttcaagtttctccttttgaagaatattcatctcctcctactacgcctcc |
392 |
Q |
| |
|
|||||||||||||||||||||| | | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38220053 |
atcttttgattctttggcttccatcaaatcgctcaattccgttcaagtctctccttttgaagaatattcatctcctcctactacgcctcc |
38220142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 38183331 - 38183479
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38183331 |
gatcatcgtcgttattcctacatcggtggagacaataaaatcatcatcgtcgatcgtaatatcaacttctttgacctcatggcaaagctttccacgttca |
38183430 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcga |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38183431 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcga |
38183479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 38215026 - 38214878
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggcaaagctttccacgttca |
118 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
38215026 |
gatcatcgtcgttattcctacatcggtggagacaataaaatcatcatcgtcgatcgtaatatcaacttctttgacctcatggcaaagctttccacgttca |
38214927 |
T |
|
| Q |
119 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcga |
167 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38214926 |
tgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcga |
38214878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 142 - 324
Target Start/End: Original strand, 38155845 - 38156027
Alignment:
| Q |
142 |
tatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttggagtatgatcatatgtgtcactttt |
241 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| | |||| | | ||| ||||| |
|
|
| T |
38155845 |
tatcaactccttggtgaagatctcgatgctttgattccggtttataacgaagaagatcttgatcatatgatgttcgagaacgatcgtttatgttgctttt |
38155944 |
T |
|
| Q |
242 |
tacgaaagcctgcatggttgagggtcttcctcttccctgtccctgttaacaacaacaaggcatcttttgattctttggcttcc |
324 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
38155945 |
cacgaaagcctgcaaagttgagggtcttcctcttccctctccctattagcaacaacaaggcatcttttaattctttggcttcc |
38156027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 38197453 - 38197370
Alignment:
| Q |
19 |
gatcatcgtcggtattcctacatcgacggagacaataaaatcatcaccgtcgattgtaatatcaacttctccgacctcatggca |
102 |
Q |
| |
|
||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
38197453 |
gatcatcttcgttattcctacatcggtggagacaataaaatcatcaccgtcgatcgtaatatcaacttctctgacctcatggca |
38197370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 74 - 235
Target Start/End: Original strand, 28340981 - 28341142
Alignment:
| Q |
74 |
gtaatatcaacttctccgacctcatggcaaagctttccacgttcatgttttccgatgtttgcttcaagtatcaactccttggtgaagatttcgatgcttt |
173 |
Q |
| |
|
|||||||||| |||||||||||| | | ||||||||| | ||||||| | |||| |||||||||||| || |||| |||||||||| | ||| ||| |
|
|
| T |
28340981 |
gtaatatcaaattctccgacctcgttgaaaagctttcttcaaccatgtttgctgatgcttgcttcaagtaccagctccctggtgaagatcttaatgattt |
28341080 |
T |
|
| Q |
174 |
gatcccggtttataacgaaaaagatcttgatcatatgatgttggagtatgatcatatgtgtc |
235 |
Q |
| |
|
|||| | ||| | ||||| | ||||| || |||||||| | |||||||||| |||||||| |
|
|
| T |
28341081 |
gatctccgttcacaacgatgatgatctcgaaaatatgatggtcgagtatgatcgtatgtgtc |
28341142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 28399676 - 28399575
Alignment:
| Q |
131 |
tttgcttcaagtatcaactccttggtgaagatttcgatgctttgatcccggtttataacgaaaaagatcttgatcatatgatgttggagtatgatcatat |
230 |
Q |
| |
|
||||||||||||||||||| | |||| ||||| ||||| |||||||||| || | ||| | ||||| | ||| |||||||||| |||||||| |||| |
|
|
| T |
28399676 |
tttgcttcaagtatcaacttcctggtcaagatctcgatactttgatcccagtcttaaaccaggaagatttggatgatatgatgttcaagtatgattatat |
28399577 |
T |
|
| Q |
231 |
gt |
232 |
Q |
| |
|
|| |
|
|
| T |
28399576 |
gt |
28399575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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