View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5348_high_14 (Length: 253)
Name: NF5348_high_14
Description: NF5348
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5348_high_14 |
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Alignment Details
Target: chr2 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 33 - 234
Target Start/End: Complemental strand, 7803771 - 7803570
Alignment:
| Q |
33 |
atgaatgaaactaaattaaaaaatattattaaaatgagtgaagtgattacaaagagtaatatcaagcctttatataagctaactactactagtaataaac |
132 |
Q |
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| T |
7803771 |
atgaatgaaactaaattaaaaaatattattaaaatgagtgaagtgattacaaagagtaatatcaagcctttatataagctaactgttactagtaattaac |
7803672 |
T |
|
| Q |
133 |
caactagccagaaagtgttcctaacacttccagctaaacatatcaaaacaaagagaaatgtgatagaaatacatcagctaaaaatgccatgaaggtagta |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7803671 |
caactagccagaaagtgttcctaacacttccagctaaacatatcaaaacaaagagaaatgtgatagaaatacatcagctaaaaatgccatgaaggtagta |
7803572 |
T |
|
| Q |
233 |
ta |
234 |
Q |
| |
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|| |
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| T |
7803571 |
ta |
7803570 |
T |
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