View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5349-Insertion-4 (Length: 273)
Name: NF5349-Insertion-4
Description: NF5349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5349-Insertion-4 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 53180121 - 53179855
Alignment:
| Q |
7 |
acacaatacatacatagtaacaagaagttatgtgaagctcgtgaagagaaagcaaattaaattaatatagcaatatctctagttatgatcatggcttgca |
106 |
Q |
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| T |
53180121 |
acacaatacatacatagtaacaagaagttatgtgaagctcgtgaagagaaagcaaattaaattaatatagcaatatctctagttatgatcatggcttgca |
53180022 |
T |
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| Q |
107 |
tatccaatttgaactttcattggagactgttgttgtggtcttagctgggcaactttaatggctaaaggtgaccacacgcgcatgtttgaataagtagttg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
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| T |
53180021 |
tatccaatttgaactttcattggagactgttgttgtggtcttagctgggcaactttaatgcctaaaggtgaccacacacgcatgtttgaataagtagttg |
53179922 |
T |
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| Q |
207 |
gctagaaagggactttgtctcttccaagttcccagattatggtggaacaagaactaagtaacatgcc |
273 |
Q |
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| T |
53179921 |
gctagaaagggactttgtctcttccaagttcccagattatggtggaacaagaactaagtaacatgcc |
53179855 |
T |
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