View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5349-Insertion-5 (Length: 245)
Name: NF5349-Insertion-5
Description: NF5349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5349-Insertion-5 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 7 - 245
Target Start/End: Complemental strand, 27782854 - 27782617
Alignment:
| Q |
7 |
aacgtcctgtgaaatagtataagatactctacgataatatcaagatattattatacattttataccttataacagttcaattttatttattatggaaact |
106 |
Q |
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| T |
27782854 |
aacgtcctgtgaaatagtataagatactctacgataatatcaagatattattatacattttataccttataacagttcaattttatttattatggaaact |
27782755 |
T |
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| Q |
107 |
taaaaatacatttcaaaacatgaaaaggaaaagcggtttcatggannnnnnnagcaatgaggagtcaatttaatatatatgagtggattgcatggctttg |
206 |
Q |
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| T |
27782754 |
t-taaatacatttcaaaacatgaaaaggaaaagcggtttcatggatttttttagcaatgaggagtcaatttaatatatatgagtggattgcatggctttg |
27782656 |
T |
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| Q |
207 |
atgtttatttcatgtacactctttatcaacggattatta |
245 |
Q |
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| T |
27782655 |
atgtttatttcatgtacactctttatcaacgtattatta |
27782617 |
T |
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