View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5350-Insertion-3 (Length: 748)

Name: NF5350-Insertion-3
Description: NF5350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5350-Insertion-3
NF5350-Insertion-3
[»] chr6 (23 HSPs)
chr6 (6-689)||(34758193-34758904)
chr6 (6-468)||(34615645-34616107)
chr6 (6-468)||(34743082-34743544)
chr6 (6-468)||(11544477-11544939)
chr6 (563-689)||(7497474-7497600)
chr6 (567-689)||(14262139-14262261)
chr6 (563-689)||(4200150-4200276)
chr6 (563-689)||(31067808-31067934)
chr6 (563-689)||(31896013-31896139)
chr6 (563-689)||(30384763-30384889)
chr6 (571-656)||(16438667-16438752)
chr6 (571-660)||(31975706-31975795)
chr6 (525-660)||(34773803-34773939)
chr6 (571-659)||(2606853-2606941)
chr6 (562-655)||(3000202-3000295)
chr6 (571-615)||(28900892-28900936)
chr6 (571-658)||(6788059-6788146)
chr6 (571-657)||(1463725-1463811)
chr6 (525-559)||(4200098-4200132)
chr6 (525-559)||(30384711-30384745)
chr6 (525-559)||(31067952-31067986)
chr6 (525-559)||(31896157-31896191)
chr6 (571-656)||(10113834-10113919)
[»] chr5 (22 HSPs)
chr5 (563-689)||(13926308-13926434)
chr5 (563-689)||(5949489-5949614)
chr5 (567-689)||(39852747-39852869)
chr5 (563-689)||(4549957-4550083)
chr5 (563-689)||(37014231-37014357)
chr5 (571-689)||(4240173-4240291)
chr5 (563-689)||(13999793-13999919)
chr5 (563-689)||(40013404-40013530)
chr5 (563-688)||(1460845-1460970)
chr5 (571-656)||(5651242-5651327)
chr5 (571-656)||(16548900-16548985)
chr5 (563-656)||(34218430-34218523)
chr5 (571-645)||(29716846-29716920)
chr5 (573-621)||(29758702-29758750)
chr5 (525-559)||(1151938-1151972)
chr5 (525-559)||(5949632-5949666)
chr5 (525-559)||(13999741-13999775)
chr5 (580-654)||(15672745-15672819)
chr5 (525-559)||(40013352-40013386)
chr5 (525-558)||(1460793-1460826)
chr5 (571-656)||(7125220-7125305)
chr5 (571-656)||(28623222-28623307)
[»] chr7 (45 HSPs)
chr7 (563-687)||(33891938-33892062)
chr7 (563-689)||(510021-510147)
chr7 (563-689)||(28342686-28342812)
chr7 (563-689)||(29614499-29614625)
chr7 (563-689)||(18838785-18838911)
chr7 (563-689)||(39028462-39028588)
chr7 (525-689)||(41827703-41827881)
chr7 (563-689)||(23101666-23101792)
chr7 (563-689)||(28034552-28034678)
chr7 (563-689)||(40460418-40460544)
chr7 (571-689)||(32884146-32884264)
chr7 (571-689)||(37328282-37328400)
chr7 (563-689)||(39784482-39784608)
chr7 (571-689)||(44256467-44256585)
chr7 (563-689)||(29585889-29586015)
chr7 (571-689)||(29893347-29893465)
chr7 (513-688)||(3023310-3023501)
chr7 (563-689)||(8675706-8675832)
chr7 (563-685)||(33383053-33383175)
chr7 (565-682)||(12740752-12740869)
chr7 (563-689)||(44121637-44121763)
chr7 (563-689)||(7993532-7993658)
chr7 (571-689)||(37972589-37972707)
chr7 (571-656)||(43172115-43172200)
chr7 (571-656)||(16709396-16709481)
chr7 (571-656)||(17683632-17683717)
chr7 (640-689)||(30823064-30823113)
chr7 (572-656)||(27148806-27148890)
chr7 (571-655)||(42610579-42610663)
chr7 (571-615)||(48136940-48136984)
chr7 (571-656)||(26201844-26201929)
chr7 (654-689)||(47066941-47066976)
chr7 (525-559)||(510165-510199)
chr7 (525-559)||(7993676-7993710)
chr7 (525-559)||(21067899-21067933)
chr7 (525-559)||(23101810-23101844)
chr7 (525-559)||(28342830-28342864)
chr7 (525-559)||(29614447-29614481)
chr7 (525-559)||(29893491-29893525)
chr7 (525-559)||(44256407-44256441)
chr7 (628-662)||(47067161-47067195)
chr7 (525-559)||(47067229-47067263)
chr7 (571-656)||(4639928-4640013)
chr7 (571-656)||(14741387-14741472)
chr7 (525-562)||(39028603-39028640)
[»] chr8 (29 HSPs)
chr8 (563-689)||(9288192-9288318)
chr8 (563-689)||(19717572-19717698)
chr8 (563-689)||(18958425-18958551)
chr8 (563-688)||(18305674-18305799)
chr8 (563-689)||(14781830-14781956)
chr8 (563-689)||(42305302-42305428)
chr8 (563-689)||(44725489-44725615)
chr8 (563-689)||(31625685-31625811)
chr8 (563-689)||(32497918-32498044)
chr8 (569-689)||(39467222-39467342)
chr8 (525-689)||(43308154-43308332)
chr8 (563-689)||(10295037-10295163)
chr8 (563-689)||(26856482-26856608)
chr8 (569-689)||(43166380-43166500)
chr8 (563-689)||(16364083-16364209)
chr8 (563-655)||(12522554-12522646)
chr8 (571-656)||(8029895-8029980)
chr8 (562-656)||(6388171-6388265)
chr8 (563-628)||(7466759-7466824)
chr8 (647-689)||(7466720-7466762)
chr8 (580-626)||(12522485-12522531)
chr8 (525-559)||(10294985-10295019)
chr8 (525-559)||(18958373-18958407)
chr8 (525-559)||(26856626-26856660)
chr8 (525-559)||(31625829-31625863)
chr8 (571-617)||(41393956-41394002)
chr8 (525-559)||(44725437-44725471)
chr8 (574-615)||(24067108-24067149)
chr8 (525-558)||(37857406-37857439)
[»] chr4 (36 HSPs)
chr4 (563-689)||(27768441-27768567)
chr4 (563-689)||(30967041-30967167)
chr4 (563-689)||(54341519-54341645)
chr4 (563-689)||(5441779-5441905)
chr4 (563-689)||(5800341-5800467)
chr4 (563-689)||(32322443-32322569)
chr4 (563-689)||(37828128-37828254)
chr4 (563-689)||(49501231-49501357)
chr4 (563-689)||(49507296-49507422)
chr4 (563-689)||(51321233-51321359)
chr4 (563-684)||(48261460-48261581)
chr4 (571-689)||(23987574-23987692)
chr4 (563-689)||(50018569-50018695)
chr4 (563-689)||(54853174-54853300)
chr4 (571-689)||(41725490-41725608)
chr4 (563-689)||(49834532-49834658)
chr4 (525-689)||(37916178-37916344)
chr4 (563-689)||(28484272-28484399)
chr4 (563-689)||(32683726-32683851)
chr4 (571-689)||(29855893-29856011)
chr4 (571-656)||(29510123-29510208)
chr4 (571-656)||(32889857-32889942)
chr4 (571-659)||(23671431-23671519)
chr4 (571-658)||(50517161-50517239)
chr4 (571-656)||(46286679-46286755)
chr4 (571-655)||(33138771-33138846)
chr4 (563-615)||(24966568-24966620)
chr4 (563-615)||(26491172-26491224)
chr4 (571-645)||(871782-871855)
chr4 (525-559)||(5441923-5441957)
chr4 (525-559)||(29856037-29856071)
chr4 (525-559)||(37828076-37828110)
chr4 (525-559)||(41725634-41725668)
chr4 (525-559)||(48261599-48261633)
chr4 (525-559)||(51321377-51321411)
chr4 (571-656)||(55165486-55165571)
[»] chr3 (40 HSPs)
chr3 (563-689)||(37455222-37455348)
chr3 (563-689)||(23753088-23753214)
chr3 (563-688)||(31645960-31646085)
chr3 (566-690)||(52810732-52810856)
chr3 (563-689)||(17946603-17946729)
chr3 (563-689)||(40897506-40897632)
chr3 (563-689)||(51737386-51737512)
chr3 (569-689)||(50761805-50761925)
chr3 (563-689)||(36673851-36673977)
chr3 (563-689)||(44905554-44905680)
chr3 (571-689)||(48379525-48379643)
chr3 (571-689)||(26107704-26107822)
chr3 (563-689)||(52617671-52617797)
chr3 (571-689)||(54629226-54629344)
chr3 (577-689)||(45863198-45863310)
chr3 (563-689)||(18750018-18750144)
chr3 (563-689)||(39038465-39038591)
chr3 (563-689)||(50903008-50903134)
chr3 (571-688)||(20833267-20833390)
chr3 (571-656)||(4962786-4962871)
chr3 (571-659)||(7665549-7665637)
chr3 (571-657)||(21386539-21386625)
chr3 (632-689)||(32580516-32580573)
chr3 (563-655)||(7437618-7437710)
chr3 (563-613)||(16155168-16155218)
chr3 (571-655)||(43172889-43172973)
chr3 (571-660)||(25049837-25049917)
chr3 (571-659)||(49296074-49296162)
chr3 (628-667)||(34483813-34483852)
chr3 (525-559)||(20833416-20833450)
chr3 (525-559)||(23753036-23753070)
chr3 (525-559)||(26107848-26107882)
chr3 (525-559)||(34483745-34483779)
chr3 (525-559)||(40897650-40897684)
chr3 (525-559)||(50902956-50902990)
chr3 (525-559)||(51737334-51737368)
chr3 (525-559)||(52810877-52810911)
chr3 (571-656)||(8598620-8598705)
chr3 (525-558)||(18750163-18750196)
chr3 (525-558)||(48379670-48379703)
[»] chr2 (30 HSPs)
chr2 (563-689)||(7027280-7027406)
chr2 (563-689)||(28739993-28740119)
chr2 (513-685)||(28844966-28845154)
chr2 (525-689)||(13833066-13833244)
chr2 (563-689)||(379307-379433)
chr2 (563-689)||(6224276-6224402)
chr2 (567-689)||(10657807-10657929)
chr2 (563-689)||(18177648-18177774)
chr2 (563-689)||(26789162-26789288)
chr2 (563-689)||(25288540-25288666)
chr2 (571-689)||(33135995-33136111)
chr2 (571-682)||(214964-215075)
chr2 (591-689)||(3464017-3464115)
chr2 (563-674)||(3575233-3575344)
chr2 (571-656)||(15224191-15224276)
chr2 (628-689)||(43825266-43825327)
chr2 (563-659)||(2308761-2308857)
chr2 (563-658)||(34342197-34342292)
chr2 (571-656)||(31847273-31847359)
chr2 (563-655)||(40829596-40829690)
chr2 (628-689)||(43078916-43078977)
chr2 (563-615)||(35404366-35404418)
chr2 (525-559)||(3575362-3575396)
chr2 (525-559)||(6224224-6224258)
chr2 (525-559)||(7027424-7027458)
chr2 (563-613)||(11153397-11153447)
chr2 (525-559)||(28739941-28739975)
chr2 (525-559)||(43825361-43825395)
chr2 (525-558)||(379452-379485)
chr2 (571-656)||(18899983-18900068)
[»] chr1 (45 HSPs)
chr1 (563-689)||(6312952-6313078)
chr1 (563-689)||(25612468-25612594)
chr1 (563-689)||(29396130-29396256)
chr1 (563-689)||(9322204-9322330)
chr1 (563-689)||(45272943-45273069)
chr1 (563-689)||(51701971-51702097)
chr1 (564-689)||(25830946-25831071)
chr1 (567-689)||(8140933-8141055)
chr1 (571-689)||(15834738-15834856)
chr1 (563-689)||(5494794-5494920)
chr1 (571-689)||(38535850-38535968)
chr1 (571-689)||(38558068-38558186)
chr1 (563-689)||(48177139-48177265)
chr1 (563-689)||(18798833-18798954)
chr1 (563-658)||(46328393-46328488)
chr1 (591-689)||(28387141-28387239)
chr1 (571-659)||(48966545-48966633)
chr1 (563-655)||(3583602-3583694)
chr1 (571-656)||(49453114-49453200)
chr1 (571-656)||(47371629-47371714)
chr1 (563-615)||(32760145-32760197)
chr1 (563-615)||(49231457-49231509)
chr1 (574-656)||(5209425-5209507)
chr1 (571-656)||(35177264-35177350)
chr1 (563-655)||(28403992-28404084)
chr1 (571-646)||(52182318-52182393)
chr1 (563-645)||(25253486-25253568)
chr1 (571-655)||(49971650-49971734)
chr1 (571-659)||(8147296-8147384)
chr1 (618-656)||(3593237-3593275)
chr1 (525-559)||(6313096-6313130)
chr1 (525-559)||(15834678-15834712)
chr1 (563-621)||(15927316-15927374)
chr1 (525-559)||(25612612-25612646)
chr1 (571-613)||(27257912-27257954)
chr1 (525-559)||(29219641-29219675)
chr1 (525-559)||(29396078-29396112)
chr1 (525-559)||(51702115-51702149)
chr1 (581-647)||(51901943-51902009)
chr1 (571-656)||(1243360-1243445)
chr1 (571-656)||(4005049-4005134)
chr1 (571-656)||(9192006-9192091)
chr1 (525-558)||(38535790-38535823)
chr1 (525-558)||(38558008-38558041)
chr1 (526-559)||(51902045-51902078)
[»] scaffold1504 (1 HSPs)
scaffold1504 (563-689)||(1243-1369)
[»] scaffold0042 (1 HSPs)
scaffold0042 (563-689)||(57763-57889)
[»] scaffold0543 (2 HSPs)
scaffold0543 (571-686)||(10904-11019)
scaffold0543 (525-559)||(11045-11079)
[»] scaffold0110 (1 HSPs)
scaffold0110 (563-689)||(39334-39460)
[»] scaffold1128 (1 HSPs)
scaffold1128 (563-656)||(951-1044)
[»] scaffold0383 (1 HSPs)
scaffold0383 (628-689)||(16744-16805)
[»] scaffold0306 (1 HSPs)
scaffold0306 (628-689)||(14284-14345)
[»] scaffold0152 (2 HSPs)
scaffold0152 (628-689)||(28760-28821)
scaffold0152 (628-689)||(20980-21041)
[»] scaffold0013 (1 HSPs)
scaffold0013 (581-656)||(89241-89316)
[»] scaffold0347 (1 HSPs)
scaffold0347 (562-599)||(15128-15165)
[»] scaffold0573 (1 HSPs)
scaffold0573 (571-615)||(8858-8902)


Alignment Details
Target: chr6 (Bit Score: 614; Significance: 0; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 614; E-Value: 0
Query Start/End: Original strand, 6 - 689
Target Start/End: Original strand, 34758193 - 34758904
Alignment:
Q  6 catccttcacactaccacatttcacgtacaacccaatcaatctattacacaattcaacattccctccgaatttcgaccttctcaagaattcatgaaccct 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34758193 catccttcacactaccacatttcacgtacaacccaatcaatctattacacaattcaacattccctccgaatttcgaccttctcaagaattcatgaaccct 34758292  T
Q  106 tttccctaattcaagcgacttcaaatcctcacataatttcaaaagcgaaagaaaatcactgtaatcagcaaaagcaccttgacccattagttctaaaact 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34758293 tttccctaattcaagcgacttcaaatcctcacataatttcaaaagcgaaagaaaatcactgtaatcagcaaaagcaccttgacccattagttctaaaact 34758392  T
Q  206 tgatttacgttaccctcttgaagaaaatgcgcaaagtttacatttttatgttgatggggggtttgatgatggttcaattttggttggattgaagggttac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34758393 tgatttacgttaccctcttgaagaaaatgcgcaaagtttacatttttatgttgatggggggtttgatgatggttcaattttggttggattgaagggttac 34758492  T
Q  306 ccatacgtaaaggttgagtttttctgggagtgaaacgagagttgttagtgccgttttgacgagggtgaaggttggtggcatggtgaatagcataggtgca 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34758493 ccatacgtaaaggttgagtttttctgggagtgaaacgagagttgttagtgccgttttgacgagggtgaaggttggtggcatggtgaatagcataggtgca 34758592  T
Q  406 gaaaggagtggaagaagatgaagatgaagccattgatgcttgaagtttaagctccatggaaatctttcaagttacacgagtttcaaaatctttcaaaaaa 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34758593 gaaaggagtggaagaagatgaagatgaagccattgatgcttgaagtttaagctccatggaaatctttcaagttacacgagtttcaaaatctttcaaaaaa 34758692  T
Q  506 ttgtgcc--------------gtcaagttacacgtttaccgagtgttaactcagtcaaacttgttaaatct--------------aaaccgattttacct 577  Q
    |||||||              ||||||||||||||||||||||||||||||||||||||||||||||| ||              |||||||||||||||    
T  34758693 ttgtgccgccattacaaatcggtcaagttacacgtttaccgagtgttaactcagtcaaacttgttaaaccttccaattttatcagaaaccgattttacct 34758792  T
Q  578 cagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatca 677  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34758793 cagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatca 34758892  T
Q  678 taatattctcaa 689  Q
    ||||||||||||    
T  34758893 taatattctcaa 34758904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 6 - 468
Target Start/End: Original strand, 34615645 - 34616107
Alignment:
Q  6 catccttcacactaccacatttcacgtacaacccaatcaatctattacacaattcaacattccctccgaatttcgaccttctcaagaattcatgaaccct 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34615645 catccttcacactaccacatttcacgtacaacccaatcaatctattacacaattcaacattccctccgaatttcgaccttctcaagaattcatgaaccct 34615744  T
Q  106 tttccctaattcaagcgacttcaaatcctcacataatttcaaaagcgaaagaaaatcactgtaatcagcaaaagcaccttgacccattagttctaaaact 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34615745 tttccctaattcaagcgacttcaaatcctcacataatttcaaaagcgaaagaaaatcactgtaatcagcaaaagcaccttgacccattagttctaaaact 34615844  T
Q  206 tgatttacgttaccctcttgaagaaaatgcgcaaagtttacatttttatgttgatggggggtttgatgatggttcaattttggttggattgaagggttac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34615845 tgatttacgttaccctcttgaagaaaatgcgcaaagtttacatttttatgttgatggggggcttgatgatggttcaattttggttggattgaagggttac 34615944  T
Q  306 ccatacgtaaaggttgagtttttctgggagtgaaacgagagttgttagtgccgttttgacgagggtgaaggttggtggcatggtgaatagcataggtgca 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34615945 ccatacgtaaaggttgagtttttctgggagtgaaacgagagttgttagtgccgttttgacgagggtgaaggttggtggcatggtgaatagcataggtgca 34616044  T
Q  406 gaaaggagtggaagaagatgaagatgaagccattgatgcttgaagtttaagctccatggaaat 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34616045 gaaaggagtggaagaagatgaagatgaagccattgatgcttgaagtttaagctccatggaaat 34616107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 459; E-Value: 0
Query Start/End: Original strand, 6 - 468
Target Start/End: Original strand, 34743082 - 34743544
Alignment:
Q  6 catccttcacactaccacatttcacgtacaacccaatcaatctattacacaattcaacattccctccgaatttcgaccttctcaagaattcatgaaccct 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34743082 catccttcacactaccacatttcacgtacaacccaatcaatctattacacaattcaacattccctccgaatttcgaccttctcaagaattcatgaaccct 34743181  T
Q  106 tttccctaattcaagcgacttcaaatcctcacataatttcaaaagcgaaagaaaatcactgtaatcagcaaaagcaccttgacccattagttctaaaact 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34743182 tttccctaattcaagcgacttcaaatcctcacataatttcaaaagcgaaagaaaatcactgtaatcagcaaaagcaccttgacccattagttctaaaact 34743281  T
Q  206 tgatttacgttaccctcttgaagaaaatgcgcaaagtttacatttttatgttgatggggggtttgatgatggttcaattttggttggattgaagggttac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34743282 tgatttacgttaccctcttgaagaaaatgcgcaaagtttacatttttatgttgatggggggcttgatgatggttcaattttggttggattgaagggttac 34743381  T
Q  306 ccatacgtaaaggttgagtttttctgggagtgaaacgagagttgttagtgccgttttgacgagggtgaaggttggtggcatggtgaatagcataggtgca 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34743382 ccatacgtaaaggttgagtttttctgggagtgaaacgagagttgttagtgccgttttgacgagggtgaaggttggtggcatggtgaatagcataggtgca 34743481  T
Q  406 gaaaggagtggaagaagatgaagatgaagccattgatgcttgaagtttaagctccatggaaat 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34743482 gaaaggagtggaagaagatgaagatgaagccattgatgcttgaagtttaagctccatggaaat 34743544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 6 - 468
Target Start/End: Original strand, 11544477 - 11544939
Alignment:
Q  6 catccttcacactaccacatttcacgtacaacccaatcaatctattacacaattcaacattccctccgaatttcgaccttctcaagaattcatgaaccct 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11544477 catccttcacactaccacatttcacgtacaacccaatcaatctattacacaattcaacattccctccgaatttcgaccttctcaagaattcatgaaccct 11544576  T
Q  106 tttccctaattcaagcgacttcaaatcctcacataatttcaaaagcgaaagaaaatcactgtaatcagcaaaagcaccttgacccattagttctaaaact 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||    
T  11544577 tttccctaattcaagcgacttcaaatcctcacataatttcaaaagcgaaagaaaatcactgtaatcagcaaaatcagtttgacccaatagttctaaaact 11544676  T
Q  206 tgatttacgttaccctcttgaagaaaatgcgcaaagtttacatttttatgttgatggggggtttgatgatggttcaattttggttggattgaagggttac 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11544677 tgatttacgttaccctcttgaagaaaatgcgcaaagtttacatttttatgttgatggggggtttgatgatggttcaattttggttggattgaagggttac 11544776  T
Q  306 ccatacgtaaaggttgagtttttctgggagtgaaacgagagttgttagtgccgttttgacgagggtgaaggttggtggcatggtgaatagcataggtgca 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11544777 ccatacgtaaaggttgagtttttctgggagtgaaacgagagttgttagtgccgttttgacgagggtgaaggttggtggcatggtgaatagcataggtgca 11544876  T
Q  406 gaaaggagtggaagaagatgaagatgaagccattgatgcttgaagtttaagctccatggaaat 468  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11544877 gaaaggagtggaagaagatgaagatgaagccattgatgcttgaagtttaagctacatggaaat 11544939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 7497600 - 7497474
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  7497600 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacattcgatttgcggaacattgattacg 7497501  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  7497500 acatactctctatcataatattctcaa 7497474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 567 - 689
Target Start/End: Original strand, 14262139 - 14262261
Alignment:
Q  567 cgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacat 666  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14262139 cgattttacctcagagttaacacgatttttgtacctaaaaaagtaaactagataatctcggagagttaacactcgatttgcggaacattgattacgacat 14262238  T
Q  667 actctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||    
T  14262239 actctctatcataatattctcaa 14262261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 4200150 - 4200276
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||| ||||||||||| |||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  4200150 aaaccgattttacctcagagttaacatgatttttgtacttaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 4200249  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  4200250 acatactctctatcataatattctcaa 4200276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 31067934 - 31067808
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  31067934 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 31067835  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||| ||||| |||||||||||||    
T  31067834 acatactttctataataatattctcaa 31067808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 31896139 - 31896013
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||| |||||||| ||||||||||||||||    
T  31896139 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtatactcgataatctcggagatttaacactcgatttacggaacattgattacg 31896040  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  31896039 acatactctctatcataatattctcaa 31896013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 30384763 - 30384889
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||| |||||||||| |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| ||||||||||||| |||||||||||    
T  30384763 aaactgattttaccttagagttaacacgatttttgtacctaaaaacataaactcggtaatctcggagagttaacactcgatttgcggatcattgattacg 30384862  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||||||| |||||||||||||    
T  30384863 acatactctctattataatattctcaa 30384889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 16438752 - 16438667
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  16438752 tttacctccaagttaacacgatttttgtacctaaaaacgtaaactcgataaactcggagagttaacactcgatttgcggaacattg 16438667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 571 - 660
Target Start/End: Original strand, 31975706 - 31975795
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgatta 660  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||   ||| |||||||||||||| || ||||||| || |||||||||    
T  31975706 tttacctcagagttaacacgattttggtacctaaacacataaactcagtaaactcggagagttaacacttgatttgccgagcattgatta 31975795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 660
Target Start/End: Complemental strand, 34773939 - 34773803
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaatctaaaccgattttacctca----gagttaacacgatttttgtacctaaaaacgtaaacttgata 620  Q
    |||||||||||||||||||||||||||| |||||| ||   || ||||||||  |    || || ||  |||||||||||||||||  |||||||  |||    
T  34773939 gtttaccgagtgttaactcagtcaaactcgttaaacctt--ccaattttaccagaaaccgattttacctgatttttgtacctaaaat-gtaaactcaata 34773843  T
Q  621 atctcggagagttaacgctcgatttgcggaacattgatta 660  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  34773842 atctcggagatttaacactcgatttgcggaacattgatta 34773803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 571 - 659
Target Start/End: Complemental strand, 2606941 - 2606853
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgatt 659  Q
    |||||||||||||||| |||||||| || |||||| |||||||||   ||| |||  |||||||||  |||||||||||||||||||||    
T  2606941 tttacctcagagttaaaacgattttggtgcctaaacacgtaaactcagtaaactcaaagagttaacattcgatttgcggaacattgatt 2606853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 655
Target Start/End: Complemental strand, 3000295 - 3000202
Alignment:
Q  562 taaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacatt 655  Q
    |||| ||| |||||| | |||||||||||||||| ||||||||| ||||||| |   ||| ||||| |||||||| || |||||| ||||||||    
T  3000295 taaatcgaatttacccccgagttaacacgattttggtacctaaacacgtaaaatcagtaaactcggcgagttaacacttgatttgtggaacatt 3000202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 615
Target Start/End: Original strand, 28900892 - 28900936
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaact 615  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||    
T  28900892 tttacctcagagttaacacgattttggtacctaaacatgtaaact 28900936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 658
Target Start/End: Complemental strand, 6788146 - 6788059
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgat 658  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||||    
T  6788146 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattgat 6788059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 571 - 657
Target Start/End: Original strand, 1463725 - 1463811
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattga 657  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| ||||||||||    
T  1463725 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattga 1463811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 4200098 - 4200132
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  4200098 gtttaccgagtgttaactcagtcaaactcgttaaa 4200132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 30384711 - 30384745
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  30384711 gtttaccgagtgttaactcagtcaaactcgttaaa 30384745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 31067986 - 31067952
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  31067986 gtttaccgagtgttaactcagtcaaactcgttaaa 31067952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 31896191 - 31896157
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  31896191 gtttaccgagtgttaactcagtcaaactcgttaaa 31896157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 10113834 - 10113919
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||    
T  10113834 tttacctccgagttaacacgtttttaggacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 10113919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 2e-60; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 13926434 - 13926308
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  13926434 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagttaacactcgatttgcggaacattgattacg 13926335  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  13926334 acatactctctatcataatattctcaa 13926308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 5949614 - 5949489
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||    
T  5949614 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaact-gataatctcggagagttaatactcgatttgcggaacattgattacg 5949516  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  5949515 acatactctctatcataatattctcaa 5949489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 567 - 689
Target Start/End: Complemental strand, 39852869 - 39852747
Alignment:
Q  567 cgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacat 666  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  39852869 cgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagagttaacactcgatttgcggaacattgattacgacat 39852770  T
Q  667 actctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||    
T  39852769 actctctatcataatattctcaa 39852747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 4549957 - 4550083
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  4549957 aaaccgattttacctcagagttaacacgatttttgtacctaaacacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacg 4550056  T
Q  663 acatactctctatcataatattctcaa 689  Q
    | |||||||||||||||||||||||||    
T  4550057 atatactctctatcataatattctcaa 4550083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 37014357 - 37014231
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||||||| |||||||||||||    
T  37014357 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcgaaacattgattacg 37014258  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  37014257 acatactctctatcataatattctcaa 37014231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 571 - 689
Target Start/End: Original strand, 4240173 - 4240291
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| |||||||||| ||| |||||||||||||||||||||||||||||    
T  4240173 tttacctcagagttaacacgatttttgcacctaaaaacgtaaactcggtaatctcagagagttaacactcaatttgcggaacattgattacgacatactc 4240272  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||||||||    
T  4240273 tctatcataatattctcaa 4240291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 13999793 - 13999919
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||| |||| ||||||||||||||||||||||||||| || ||||  ||||||||||||| ||||| |||||||||||||||||||||||||    
T  13999793 aaaccgattttatctcaaagttaacacgatttttgtacctaaaaatgtcaactccataatctcggagatttaacactcgatttgcggaacattgattacg 13999892  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  13999893 acatactctctatcataatattctcaa 13999919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 40013404 - 40013530
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||| ||| |||||| ||||||| | |||||||||||||||||| |||||||||||||||||| ||||||    
T  40013404 aaaccgattttacctcagagttaacacgatttttatacttaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcggaacattaattacg 40013503  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||| ||||||||||||||||||||    
T  40013504 acataccctctatcataatattctcaa 40013530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 563 - 688
Target Start/End: Original strand, 1460845 - 1460970
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||||||||| | |||||||  ||||||||| |||||||||||||||||||||||||    
T  1460845 aaaccgagtttacctctgagttaacacaatttttgtacctaaaaacgtaaactcggtaatctcaaagagttaacactcgatttgcggaacattgattacg 1460944  T
Q  663 acatactctctatcataatattctca 688  Q
    ||||||||||||||||||||||||||    
T  1460945 acatactctctatcataatattctca 1460970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 5651242 - 5651327
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| | ||||| |||| || |||||| |||||||||||||||||||    
T  5651242 tttacctccgagttaacacgattttggtacctaaacacgtaaaatcgataaactcgaagtgttaacactcgatttgcggaacattg 5651327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 16548900 - 16548985
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||| ||||| |||   |||||||| ||||||||  |||||||||    
T  16548900 tttacctccgagttgacacgattttggtacctaaaaacgtaaactcgataaactcaatgagttaacactcgatttatggaacattg 16548985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 656
Target Start/End: Complemental strand, 34218523 - 34218430
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||| |||||||  || ||||||||||||| ||| ||||||||||||||||| ||| ||| ||| |||||| ||| |||||||||| ||||    
T  34218523 aaaccgaatttaccttcgaattaacacgattttggtatctaaaaacgtaaacttggtaaactcagagtgttaacactcaatttgcggaatattg 34218430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 571 - 645
Target Start/End: Original strand, 29716846 - 29716920
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgattt 645  Q
    |||||||  ||||||||||||||||  ||||||||||||||||||   ||| || ||||||||||| ||||||||    
T  29716846 tttaccttcgagttaacacgattttgatacctaaaaacgtaaactccgtaaacttggagagttaacactcgattt 29716920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 621
Target Start/End: Complemental strand, 29758750 - 29758702
Alignment:
Q  573 tacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataa 621  Q
    |||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  29758750 tacctccgagttaacacgattttgatacctaaaaacgtaaactcgataa 29758702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 1151938 - 1151972
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  1151938 gtttaccgagtgttaactcagtcaaactcgttaaa 1151972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 5949666 - 5949632
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  5949666 gtttaccgagtgttaactcagtcaaactcgttaaa 5949632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 13999741 - 13999775
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  13999741 gtttaccgagtgttaactcagtcaaactcgttaaa 13999775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 580 - 654
Target Start/End: Original strand, 15672745 - 15672819
Alignment:
Q  580 gagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacat 654  Q
    ||||| |||||||||| |||||||||||| ||||||   ||| ||||| |||||||| || |||||| |||||||    
T  15672745 gagttgacacgattttagtacctaaaaacataaactcagtaaactcggcgagttaacacttgatttgtggaacat 15672819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 40013352 - 40013386
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    ||||||||||||||||||||||||| |||||||||    
T  40013352 gtttaccgagtgttaactcagtcaatcttgttaaa 40013386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 558
Target Start/End: Original strand, 1460793 - 1460826
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaa 558  Q
    |||||||||||||||||||||||||||| |||||    
T  1460793 gtttaccgagtgttaactcagtcaaactcgttaa 1460826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 7125220 - 7125305
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||    
T  7125220 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 7125305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 28623222 - 28623307
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||| ||| ||||||||||| |||| | ||||||| ||||||||| ||||| ||||  ||||| || | ||||||| |||||||||    
T  28623222 tttatctccgagttaacacgtttttagcacctaaacacgtaaactcgataaactcgctgagttgacacgcgatttgtggaacattg 28623307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 8e-57; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 563 - 687
Target Start/End: Original strand, 33891938 - 33892062
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  33891938 aaaccgattttaccttagagttaacacgatttttgtacctaaaaacgtaaacttggtaatctcggagagttaacactcgatttgcggaacattgattacg 33892037  T
Q  663 acatactctctatcataatattctc 687  Q
    |||||||||||||||||||||||||    
T  33892038 acatactctctatcataatattctc 33892062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 510147 - 510021
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  510147 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 510048  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  510047 acatactctctatcataatattctcaa 510021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 28342812 - 28342686
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  28342812 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 28342713  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  28342712 acatactctctatcataatattctcaa 28342686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 29614499 - 29614625
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  29614499 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 29614598  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  29614599 acatactctctatcataatattctcaa 29614625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 18838911 - 18838785
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||| ||||    
T  18838911 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgagtacg 18838812  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  18838811 acatactctctatcataatattctcaa 18838785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 39028588 - 39028462
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  39028588 aaaccgattttacctcagagtttacacaatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacg 39028489  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  39028488 acatactctctatcataatattctcaa 39028462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 525 - 689
Target Start/End: Complemental strand, 41827881 - 41827703
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaatct--------------aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgt 610  Q
    ||||||||||||||||||||||||||||||||||||||              |||| || ||||||||||||||||||||||||||||||||||||||||    
T  41827881 gtttaccgagtgttaactcagtcaaacttgttaaatcttctgattttaccagaaactgagtttacctcagagttaacacgatttttgtacctaaaaacgt 41827782  T
Q  611 aaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    |||||  |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41827781 aaactcaataatctcagagagttaacactcaatttgcggaacattgattacgacatactctctatcataatattctcaa 41827703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 23101792 - 23101666
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  23101792 aaactgattttaccttagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 23101693  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  23101692 acatactctctatcataatattctcaa 23101666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 28034552 - 28034678
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||| |||||||||||||||||||||||||    
T  28034552 aaaccgattttacatcagagttaacacgatttttgtacataaaaacgtaaactcggtaatctcagagagttaacactcgatttgcggaacattgattacg 28034651  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  28034652 acatactctctatcataatattctcaa 28034678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 40460418 - 40460544
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||| ||||||||||||||| |||||||||    
T  40460418 aaaccgattttacctcagagttaacacgatttttgtacctaaaagcgtaaactcggtaatctcgaagagttaacactcgatttgcggaacgttgattacg 40460517  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  40460518 acatactctctatcataatattctcaa 40460544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 32884264 - 32884146
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  32884264 tttacctcagagttaactcgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttacggaacattgattacgacatactc 32884165  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||||||||    
T  32884164 tctatcataatattctcaa 32884146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 37328400 - 37328282
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  37328400 tttaccttagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagtcaacactcgatttgcggaacattgattacgacatactc 37328301  T
Q  671 tctatcataatattctcaa 689  Q
    ||||| |||||||||||||    
T  37328300 tctataataatattctcaa 37328282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 39784608 - 39784482
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||| |||||||| ||||||||||||||||    
T  39784608 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcgaagatttaacactcgatttacggaacattgattacg 39784509  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||| |||||||||||||||||||    
T  39784508 acatactttctatcataatattctcaa 39784482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 571 - 689
Target Start/End: Original strand, 44256467 - 44256585
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  44256467 tttacctcagagttaacacgatttttgtatctaaaaacgtaaactcgataatctcggagagttaacactcgatttgcgggacattgattacgacatactc 44256566  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||| ||||    
T  44256567 tctatcataatattttcaa 44256585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 29586015 - 29585889
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| ||| || ||||||||||||| ||||    
T  29586015 aaaccgactttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcaatctgcggaacattgactacg 29585916  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  29585915 acatactctctatcataatattctcaa 29585889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 29893465 - 29893347
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29893465 tttacctcagagttaacacgatttttgtacttaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacgacatactc 29893366  T
Q  671 tctatcataatattctcaa 689  Q
    ||||||| |||||||||||    
T  29893365 tctatcagaatattctcaa 29893347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 513 - 688
Target Start/End: Complemental strand, 3023501 - 3023310
Alignment:
Q  513 gtcaagttacacg--tttaccgagtgttaactcagtcaaacttgttaaatct--------------aaaccgattttacctcagagttaacacgattttt 596  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||| ||              ||||||||||||||||| |||||||| |||||||    
T  3023501 gtcaagttacacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcaaagttaacatgattttt 3023402  T
Q  597 gtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctca 688  Q
    |||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  3023401 gtacctaaaaacataaactcgataatctcggagagttaacactcgatttgcggatcattgattatgacataatctctatcataatattctca 3023310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 8675832 - 8675706
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||||||| |||| | |||||||||||||||||| ||||||||||| ||||||||||||     
T  8675832 aaaccgagtttaccttagagttaacacgattttggtacctaaaaacgttaactcggtaatctcggagagttaacactcgatttgcgaaacattgattaca 8675733  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  8675732 acatactctctatcataatattctcaa 8675706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 563 - 685
Target Start/End: Complemental strand, 33383175 - 33383053
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| |||| |||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||     
T  33383175 aaaccgagtttatctcagagttaccacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattaca 33383076  T
Q  663 acatactctctatcataatattc 685  Q
    |||||||||||||||||||||||    
T  33383075 acatactctctatcataatattc 33383053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 565 - 682
Target Start/End: Complemental strand, 12740869 - 12740752
Alignment:
Q  565 accgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgac 664  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||| |||||||||||| ||    
T  12740869 accgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcgtaacattgattacaac 12740770  T
Q  665 atactctctatcataata 682  Q
    ||||||||||||||||||    
T  12740769 atactctctatcataata 12740752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 44121637 - 44121763
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||| | | ||||||| |||||||||| |||||||||||||| ||||||||||    
T  44121637 aaaccgaatttacctcatagttaacacgatttttgtacctaaaaacgtaaattcggtaatctcagagagttaacactcgatttgcggaatattgattacg 44121736  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||| ||| |||||||||||||||||||    
T  44121737 acacactttctatcataatattctcaa 44121763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 7993658 - 7993532
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||  || ||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  7993658 aaaccgagtttacctcatagttaacacgatttttgtacttaaaaatatatactcggtaatctcggagagttaacactcgatttgcggaacattgattacg 7993559  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||| |||| |||||||||||||    
T  7993558 acatactccctataataatattctcaa 7993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 571 - 689
Target Start/End: Original strand, 37972589 - 37972707
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| | ||||||| || ||||||| |||||||||||||||||||||||| ||||||||    
T  37972589 tttatctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcagaaagttaacactcgatttgcggaacattgattacaacatactc 37972688  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||| ||||||    
T  37972689 tctatcataatactctcaa 37972707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 43172200 - 43172115
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||| ||||||  |||||||||| ||||||| | ||| ||| |||||||||| |||||||||||||||||||    
T  43172200 tttacctccgagttaacatgattttgatacctaaaaatgtaaactcggtaaactcagagagttaacactcgatttgcggaacattg 43172115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 16709481 - 16709396
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| | ||| |||  |  |||||| || ||||||||||||||||    
T  16709481 tttacctcagagttaccacgattttggtacctaaaaacgtaaactcggtaaactcataatgttaacacttgatttgcggaacattg 16709396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 17683717 - 17683632
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||| | ||| |||  |  |||||| || ||||||||||||||||    
T  17683717 tttacctcagagttaccacgattttggtacctaaaaacgtaaactcggtaaactcataatgttaacacttgatttgcggaacattg 17683632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 640 - 689
Target Start/End: Complemental strand, 30823113 - 30823064
Alignment:
Q  640 cgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  30823113 cgatttgcgggacattgattacgccatactctctatcataatattctcaa 30823064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 572 - 656
Target Start/End: Complemental strand, 27148890 - 27148806
Alignment:
Q  572 ttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||| || |||||||||||||  |||||||||||||||||| ||||| ||  | |||||||| ||||||||| |||||||||    
T  27148890 ttacctccgatttaacacgattttgatacctaaaaacgtaaactcgataaactttgcgagttaacactcgatttgtggaacattg 27148806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 571 - 655
Target Start/End: Complemental strand, 42610663 - 42610579
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacatt 655  Q
    ||||||||| | ||||||||||||| ||||||||| ||||||| | | ||| ||| |||||||||| ||| ||||||||||||||    
T  42610663 tttacctcaaatttaacacgattttggtacctaaacacgtaaattcggtaaactcagagagttaacactcaatttgcggaacatt 42610579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 571 - 615
Target Start/End: Original strand, 48136940 - 48136984
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaact 615  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  48136940 tttacctcagagttaacacgattttggtacctaaaaacgtaaact 48136984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 26201844 - 26201929
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||| |||||||||| ||||||||||| ||||| | | ||| |||||  ||||||| ||||||||| |||||||||    
T  26201844 tttacctccgagtttacacgattttggtacctaaaaatgtaaattcggtaaactcggcaagttaacactcgatttgtggaacattg 26201929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 689
Target Start/End: Complemental strand, 47066976 - 47066941
Alignment:
Q  654 ttgattacgacatactctctatcataatattctcaa 689  Q
    |||||||||||||||| |||||||||||||||||||    
T  47066976 ttgattacgacatactatctatcataatattctcaa 47066941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 510199 - 510165
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  510199 gtttaccgagtgttaactcagtcaaactcgttaaa 510165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 7993710 - 7993676
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  7993710 gtttaccgagtgttaactcagtcaaactcgttaaa 7993676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 21067933 - 21067899
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  21067933 gtttaccgagtgttaactcagtcaaactcgttaaa 21067899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 23101844 - 23101810
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  23101844 gtttaccgagtgttaactcagtcaaactcgttaaa 23101810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 28342864 - 28342830
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  28342864 gtttaccgagtgttaactcagtcaaactcgttaaa 28342830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 29614447 - 29614481
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  29614447 gtttaccgagtgttaactcagtcaaactcgttaaa 29614481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 29893525 - 29893491
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  29893525 gtttaccgagtgttaactcagtcaaactcgttaaa 29893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 44256407 - 44256441
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  44256407 gtttaccgagtgttaactcagtcaaactcgttaaa 44256441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 662
Target Start/End: Complemental strand, 47067195 - 47067161
Alignment:
Q  628 agagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||| |||||||||||||||||||||||||    
T  47067195 agagttaacactcgatttgcggaacattgattacg 47067161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 47067263 - 47067229
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  47067263 gtttaccgagtgttaactcagtcaaactcgttaaa 47067229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 4639928 - 4640013
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||    
T  4639928 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 4640013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 14741472 - 14741387
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||    
T  14741472 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 14741387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 562
Target Start/End: Complemental strand, 39028640 - 39028603
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaatct 562  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  39028640 gtttactgagtgttaactcagtcaaactcgttaaatct 39028603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 1e-55; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 9288192 - 9288318
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||    
T  9288192 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcgaagagttaacactcgatttgcggaacattgattacg 9288291  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  9288292 acatactctctatcataatattctcaa 9288318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 19717572 - 19717698
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  19717572 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacg 19717671  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  19717672 acatactctctatcataatattctcaa 19717698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 18958425 - 18958551
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  18958425 aaaccaattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacg 18958524  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  18958525 acatactctctatcataatattctcaa 18958551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 563 - 688
Target Start/End: Original strand, 18305674 - 18305799
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||| ||||||||||| |||||||||||||    
T  18305674 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcgatttgcgtaacattgattacg 18305773  T
Q  663 acatactctctatcataatattctca 688  Q
    ||||||||||||||||||||||||||    
T  18305774 acatactctctatcataatattctca 18305799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 14781830 - 14781956
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  14781830 aaaccgattttacctcagagttaacacgatttttatacctaaaaatgtcaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 14781929  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  14781930 acatactctctatcataatattctcaa 14781956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 42305302 - 42305428
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||| | |||||||||||||||||| ||||||||| |||||||||||||||    
T  42305302 aaaccgattttacctcagagttaacacgatttttatacctaaaaaggtaaactcggtaatctcggagagttaacactcgatttgtggaacattgattacg 42305401  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  42305402 acatactctctatcataatattctcaa 42305428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 44725489 - 44725615
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| |||| ||||| |||||||||||||||||||||||||    
T  44725489 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaatctcgataatctctgagatttaacactcgatttgcggaacattgattacg 44725588  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  44725589 acatactctctatcataatattctcaa 44725615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 31625811 - 31625685
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  31625811 aaaccgagtttacctcagagttaacacaatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacg 31625712  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||||||| |||||||||||||    
T  31625711 acatactctctataataatattctcaa 31625685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 32498044 - 32497918
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| ||||||| || ||||||||||    
T  32498044 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcaatttgcgaaaaattgattacg 32497945  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  32497944 acatactctctatcataatattctcaa 32497918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 569 - 689
Target Start/End: Original strand, 39467222 - 39467342
Alignment:
Q  569 attttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatac 668  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||  | |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39467222 attttaccttagagttaatacgatttttgtacctaaaaacgtaaacgcggtaatctcggagagttaacactcgatttgcggaacattgattacgacatac 39467321  T
Q  669 tctctatcataatattctcaa 689  Q
    |||||||||||||||||||||    
T  39467322 tctctatcataatattctcaa 39467342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 525 - 689
Target Start/End: Original strand, 43308154 - 43308332
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaatct--------------aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgt 610  Q
    ||||||||||||||||||||||||||||||||||| ||              ||||||||||||  ||||||||||||||||||| |||||||||||||     
T  43308154 gtttaccgagtgttaactcagtcaaacttgttaaaccttccaattttaccagaaaccgattttatatcagagttaacacgattttggtacctaaaaacgc 43308253  T
Q  611 aaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||| |||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43308254 aaactcgataatctcgaagagttaacactcgatttgcggaacaatgattacgacatactctctatcataatattctcaa 43308332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 10295037 - 10295163
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||| |||||||| ||||||||||||| ||    
T  10295037 aaaccgagtttacctcagagttaacacgattgttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttacggaacattgattgcg 10295136  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||||||| |||||||||||||    
T  10295137 acatactctctataataatattctcaa 10295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 26856608 - 26856482
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||||| | |||||||||||||||||| ||||||||| | |||||||||||||    
T  26856608 aaaccgagtttacctcagagttaacacgatttttgtacctataaacataaactcggtaatctcggagagttaacactcgatttgtgtaacattgattacg 26856509  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||||||| |||||||||||||    
T  26856508 acatactctctataataatattctcaa 26856482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 569 - 689
Target Start/End: Original strand, 43166380 - 43166500
Alignment:
Q  569 attttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatac 668  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | | ||||| ||||||||||||||||||||| |||||||||    
T  43166380 attttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcgaaaaattaacactcgatttgcggaacattgatcacgacatac 43166479  T
Q  669 tctctatcataatattctcaa 689  Q
    ||||||| |||||||||||||    
T  43166480 tctctattataatattctcaa 43166500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 16364209 - 16364083
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||  ||||||||| |||||||||||||||||||||||||    
T  16364209 aaaccgaatttaccttagagttaacacgatttttgtacctaaaaacgtaaattcgataatctcatagagttaacactcgatttgcggaacattgattacg 16364110  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||| ||| |||||||| ||||    
T  16364109 acatactctgtataataatattttcaa 16364083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 563 - 655
Target Start/End: Original strand, 12522554 - 12522646
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacatt 655  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||| | ||||||  ||| |||||||||||||| ||||||||||||||||||    
T  12522554 aaaccgagtttacctctgagttaacacgattttggtacctaaaaatgcaaacttagtaaactcggagagttaacactcgatttgcggaacatt 12522646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 8029895 - 8029980
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||| ||||| |||| ||||||||| |||||||| ||||||||||    
T  8029895 tttatctcagagttaacacgattttggtacctaaacacgtaaactcgataaactcgaagagttaacactcgatttacggaacattg 8029980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 562 - 656
Target Start/End: Original strand, 6388171 - 6388265
Alignment:
Q  562 taaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||| || |||||||| |||||||||||||||| |||||||||||| |||| | ||||| ||||| |||||| | ||| |||||||||||||||    
T  6388171 taaacagagtttacctccgagttaacacgattttggtacctaaaaacataaattcgataaactcggcgagttaccactcaatttgcggaacattg 6388265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 563 - 628
Target Start/End: Complemental strand, 7466824 - 7466759
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcgga 628  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||    
T  7466824 aaactgattttacctcagagttaacacgatttttgtacttaaaaacataaactcggtaatctcgga 7466759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 647 - 689
Target Start/End: Complemental strand, 7466762 - 7466720
Alignment:
Q  647 cggaacattgattacgacatactctctatcataatattctcaa 689  Q
    |||| ||||||||||||||||||||||||||||||||| ||||    
T  7466762 cggatcattgattacgacatactctctatcataatattatcaa 7466720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 580 - 626
Target Start/End: Original strand, 12522485 - 12522531
Alignment:
Q  580 gagttaacacgatttttgtacctaaaaacgtaaacttgataatctcg 626  Q
    |||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  12522485 gagttaacacgattttggtacctaaaaacgtaaacttggtaagctcg 12522531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 10294985 - 10295019
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  10294985 gtttaccgagtgttaactcagtcaaactcgttaaa 10295019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 18958373 - 18958407
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    ||||||||||||||||||||||||| |||||||||    
T  18958373 gtttaccgagtgttaactcagtcaatcttgttaaa 18958407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 26856660 - 26856626
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  26856660 gtttaccgagtgttaactcagtcaaactcgttaaa 26856626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 31625863 - 31625829
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  31625863 gtttaccgagtgttaactcagtcaaactcgttaaa 31625829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 571 - 617
Target Start/End: Complemental strand, 41394002 - 41393956
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttg 617  Q
    |||||||| || |||||||||||||  ||||||||||||||||||||    
T  41394002 tttacctccgaattaacacgattttgatacctaaaaacgtaaacttg 41393956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 44725437 - 44725471
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  44725437 gtttaccgagtgttaactcagtcaaactcgttaaa 44725471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 574 - 615
Target Start/End: Complemental strand, 24067149 - 24067108
Alignment:
Q  574 acctcagagttaacacgatttttgtacctaaaaacgtaaact 615  Q
    ||||| ||||| |||||||||| |||||||||||||||||||    
T  24067149 acctccgagttgacacgattttggtacctaaaaacgtaaact 24067108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 558
Target Start/End: Complemental strand, 37857439 - 37857406
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaa 558  Q
    |||||||||||||||||||||||||||| |||||    
T  37857439 gtttaccgagtgttaactcagtcaaactcgttaa 37857406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 1e-55; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 27768567 - 27768441
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  27768567 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 27768468  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  27768467 acatactctctatcataatattctcaa 27768441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 30967041 - 30967167
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  30967041 aaaccaattttatctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacg 30967140  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  30967141 acatactctctatcataatattctcaa 30967167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 54341645 - 54341519
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  54341645 aaaccgattttacctcagagtttacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 54341546  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  54341545 acatactctctatcataatattctcaa 54341519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 5441905 - 5441779
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||  ||||||| ||||||||||||||||    
T  5441905 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacattcgatttacggaacattgattacg 5441806  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  5441805 acatactctctatcataatattctcaa 5441779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 5800467 - 5800341
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  5800467 aaaccgaatttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagagttaacactcgatttgcggaacattgattaca 5800368  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||||||| |||||||||||||    
T  5800367 acatactctctataataatattctcaa 5800341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 32322569 - 32322443
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||||||||||||    
T  32322569 aaaccgagtttacctcagaattaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgacttgcggaacattgattacg 32322470  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  32322469 acatactctctatcataatattctcaa 32322443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 37828128 - 37828254
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||  ||||||||||||||||||||||||    
T  37828128 aaaccgattttacctcagagttaacacgatttttgtatctaaaaatgtaaactcgataatctcggagatttaacattcgatttgcggaacattgattacg 37828227  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  37828228 acatactctctatcataatattctcaa 37828254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 49501231 - 49501357
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||    
T  49501231 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcagaacattgattacg 49501330  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||||||| |||||||||||||    
T  49501331 acatactctctataataatattctcaa 49501357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 49507296 - 49507422
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||    
T  49507296 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcagaacattgattacg 49507395  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||||||| |||||||||||||    
T  49507396 acatactctctataataatattctcaa 49507422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 51321359 - 51321233
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||||||||||||    
T  51321359 aaaccgattttacgtcagagttaacacgatttttgtacctaaaaatgtaaactcgataatatcggagagttaacactcgatttgcggaacattgattacg 51321260  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||||| |||||||||||||||    
T  51321259 acatactctctttcataatattctcaa 51321233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 563 - 684
Target Start/End: Complemental strand, 48261581 - 48261460
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  48261581 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtcaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 48261482  T
Q  663 acatactctctatcataatatt 684  Q
    ||||||||||||||||||||||    
T  48261481 acatactctctatcataatatt 48261460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 23987692 - 23987574
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||| ||||||||||||||||||||||||||||||||     
T  23987692 tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagaggtaacactcgatttgcggaacattgattacgacatacta 23987593  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||||||||    
T  23987592 tctatcataatattctcaa 23987574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 50018695 - 50018569
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |||||||||||||||||| |||||||||| ||||||||||||||    
T  50018695 aaaccgattttacctcagagttaacatgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcagaacattgattacg 50018596  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||| |||||||||||||||||||    
T  50018595 acatactttctatcataatattctcaa 50018569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 54853174 - 54853300
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||| |||||||||| |||||| ||||||| | |||||||||||||||||| ||||||||| |||||||||||||||    
T  54853174 aaaccgattttacctcagagttaacacaatttttgtacataaaaaggtaaactcggtaatctcggagagttaacactcgatttgtggaacattgattacg 54853273  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  54853274 acatactctctatcataatattctcaa 54853300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 41725608 - 41725490
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| |||||||||  ||||||||||||||||||||||    
T  41725608 tttacctcagagttaacacgatttttgtacctaaaaacgtaaactaggtaatcacggagagttaacactcgatttgaagaacattgattacgacatactc 41725509  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||||||||    
T  41725508 tctatcataatattctcaa 41725490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 49834532 - 49834658
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | ||||||  |||||||||| ||| |||| ||||||||||||||||    
T  49834532 aaaccgagtttacctcagagttaacacgatttttgtagctaaaaacgtaaactcggtaatcttagagagttaacactcaatttacggaacattgattacg 49834631  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  49834632 acatactctctatcataatattctcaa 49834658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 525 - 689
Target Start/End: Complemental strand, 37916344 - 37916178
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaatctaaaccgattttacctca----gagttaacacgatttttgtacctaaaaacgtaaacttgata 620  Q
    |||||| ||||||||||||||||||||| |||||| ||   |||||||||||  |    |||||||||| |||||||||| |||||| ||||||| ||||    
T  37916344 gtttactgagtgttaactcagtcaaactcgttaaacctt--ccgattttaccagaaaccgagttaacacaatttttgtacataaaaatgtaaactcgata 37916247  T
Q  621 atctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  37916246 atctcggagagttaacactcaatttgcggaacattgattacgacatactctctataataatattctcaa 37916178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 28484399 - 28484272
Alignment:
Q  563 aaaccgattttacctcagagttaacacga-tttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattac 661  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| |||||||||| ||| |||||||||||||| |||||    
T  28484399 aaaccgagtttacctcagagttaacacgactttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcaatttgcggaacattaattac 28484300  T
Q  662 gacatactctctatcataatattctcaa 689  Q
     |||||||||||||||||||||||||||    
T  28484299 aacatactctctatcataatattctcaa 28484272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 32683726 - 32683851
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||| |||||||| | |||||||||||||||||||||||||||||| || | ||||||| |||||||||| ||||||||| |||||||||||||||    
T  32683726 aaaccgatcttacctcataattaacacgatttttgtacctaaaaacgtaa-ctcggtaatctctgagagttaacactcgatttgtggaacattgattacg 32683824  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  32683825 acatactctctatcataatattctcaa 32683851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 29856011 - 29855893
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||| ||||  ||||||||  |||||||||||||||||||||||    
T  29856011 tttacctcagagttaacacgatttttgtacataaaaacgtaaactcggtaatctcggagaattaatactcgatttatggaacattgattacgacatactc 29855912  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||| ||||    
T  29855911 tctatcataatattatcaa 29855893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 29510123 - 29510208
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||| |||||||||||||||||||  |||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||||    
T  29510123 tttacatcagagttaacacgattttgatacctaaacacgtaaactcgataaactcggagagttaacactcgatttgcggaacattg 29510208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 32889942 - 32889857
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||| ||| ||||||||||||||| ||||||||| ||||||||| | |||  ||||||||||||| |||||||||||||||||||    
T  32889942 tttacatcaaagttaacacgattttggtacctaaacacgtaaactcggtaaattcggagagttaacactcgatttgcggaacattg 32889857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 571 - 659
Target Start/End: Original strand, 23671431 - 23671519
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgatt 659  Q
    |||||||| |||||||||||||||| ||||||||| |||||||   | ||| ||| ||| | |||| ||||||||||||||||||||||    
T  23671431 tttacctccgagttaacacgattttggtacctaaacacgtaaaaccggtaaactcagagtgctaacactcgatttgcggaacattgatt 23671519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 571 - 658
Target Start/End: Complemental strand, 50517239 - 50517161
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgat 658  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||         |||||||||||||| |||||||||||||||||||||    
T  50517239 tttacctcaaagttaacacgattttggtacctaaacacgtaaa---------ctcggagagttaacactcgatttgcggaacattgat 50517161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 46286755 - 46286679
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||| || |||||||||||||| |||||||||||||||||         |||||||||||||| |||||||||||||||||||    
T  46286755 tttaccttagtgttaacacgattttggtacctaaaaacgtaaa---------ctcggagagttaacactcgatttgcggaacattg 46286679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 655
Target Start/End: Complemental strand, 33138846 - 33138771
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacatt 655  Q
    |||||||| |||||||||||||||| ||||||||| |||||||         |||||||||||||| ||||||||||||||||||    
T  33138846 tttacctccgagttaacacgattttggtacctaaacacgtaaa---------ctcggagagttaacactcgatttgcggaacatt 33138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 615
Target Start/End: Original strand, 24966568 - 24966620
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaact 615  Q
    ||||||| ||||| || |||||||||||||||| ||||||||| |||||||||    
T  24966568 aaaccgaatttacttccgagttaacacgattttggtacctaaacacgtaaact 24966620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 615
Target Start/End: Original strand, 26491172 - 26491224
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaact 615  Q
    ||||||| ||||||||| | ||||||||||||| ||||||||| |||||||||    
T  26491172 aaaccgagtttacctcaaatttaacacgattttggtacctaaacacgtaaact 26491224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 571 - 645
Target Start/End: Complemental strand, 871855 - 871782
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgattt 645  Q
    |||||||| ||||| |||||||||  ||||||||||||||||||| | ||| ||||  |||||||| ||||||||    
T  871855 tttacctccgagttgacacgatttg-gtacctaaaaacgtaaactcggtaaactcgacgagttaacactcgattt 871782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 5441957 - 5441923
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  5441957 gtttaccgagtgttaactcagtcaaactcgttaaa 5441923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 29856071 - 29856037
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  29856071 gtttaccgagtgttaactcagtcaaactcgttaaa 29856037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 37828076 - 37828110
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  37828076 gtttaccgagtgttaactcagtcaaactcgttaaa 37828110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 41725668 - 41725634
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  41725668 gtttaccgagtgttaactcagtcaaactcgttaaa 41725634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 48261633 - 48261599
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  48261633 gtttaccgagtgttaactcagtcaaactcgttaaa 48261599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 51321411 - 51321377
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  51321411 gtttaccgagtgttaactcagtcaaactggttaaa 51321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 55165571 - 55165486
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||||  |||||| |||||||| |||| ||||||||||||||   ||| ||||  |||||| | ||||||||| |||||||||    
T  55165571 tttacctccaagttaatacgattttggtacgtaaaaacgtaaactcagtaaactcgacgagttagcactcgatttgtggaacattg 55165486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 1e-55; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 37455348 - 37455222
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||| |||||||||||||||||||||||||    
T  37455348 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcgatttgcggaacattgattacg 37455249  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  37455248 acatactctctatcataatattctcaa 37455222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 23753088 - 23753214
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||||||||||| |||||||||||||    
T  23753088 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcgaaacattgattacg 23753187  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  23753188 acatactctctatcataatattctcaa 23753214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 563 - 688
Target Start/End: Original strand, 31645960 - 31646085
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||| ||||||||||| |||||||||||||    
T  31645960 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaagctcggtaatctcggagagttaacactcgatttgcgaaacattgattacg 31646059  T
Q  663 acatactctctatcataatattctca 688  Q
    ||||||||||||||||||||||||||    
T  31646060 acatactctctatcataatattctca 31646085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 566 - 690
Target Start/End: Complemental strand, 52810856 - 52810732
Alignment:
Q  566 ccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgaca 665  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  52810856 ccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacgaca 52810757  T
Q  666 tactctctatcataatattctcaaa 690  Q
    |||||||||||||||||||||||||    
T  52810756 tactctctatcataatattctcaaa 52810732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 17946729 - 17946603
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||    
T  17946729 aaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgataatctcggagaattaacactcgatttgcggaacatcgattacg 17946630  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  17946629 acatactctctatcataatattctcaa 17946603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 40897632 - 40897506
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| | | |||||||||||||||||| |||||| ||||||||||||||||||    
T  40897632 aaaccgattttacctcagagttaacacgatttttgtacctaaaatcgtaaattcggtaatctcggagagttaacactcgatctgcggaacattgattacg 40897533  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  40897532 acatactctctatcataatattctcaa 40897506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 51737386 - 51737512
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||||    
T  51737386 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcagagagttaacactcgatttgcggaacattgattacg 51737485  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||||||| |||||||||||||    
T  51737486 acatactctctataataatattctcaa 51737512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 569 - 689
Target Start/End: Original strand, 50761805 - 50761925
Alignment:
Q  569 attttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatac 668  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  50761805 attttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgctgaacattgattacgacatac 50761904  T
Q  669 tctctatcataatattctcaa 689  Q
    |||||||||||| ||||||||    
T  50761905 tctctatcataacattctcaa 50761925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 36673851 - 36673977
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||||||| |||||| || |||| |||||||||||||| ||||| |||||||||| ||||||||||||||    
T  36673851 aaaccgattttacctcagagttaacacgatttttgtacttaaaaatgtcaactcgataatctcggagatttaacactcgatttgcagaacattgattacg 36673950  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  36673951 acatactctctatcataatattctcaa 36673977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 44905554 - 44905680
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||  |||||||||| |||||||||||||||||||||| |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  44905554 aaaccgagattacctcagaattaacacgatttttgtacctaagaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacg 44905653  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  44905654 acatactctctatcataatattctcaa 44905680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 48379643 - 48379525
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  48379643 tttacctcagaattaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacgacatactt 48379544  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||||||||    
T  48379543 tctatcataatattctcaa 48379525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 26107822 - 26107704
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    |||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  26107822 tttacctcagagttaacatgatttttgtacctaaaaacgtaaactcgttaatctcggagagttatcactcgatttgcggaacattgattacgacatactc 26107723  T
Q  671 tctatcataatattctcaa 689  Q
    ||||| |||||||||||||    
T  26107722 tctataataatattctcaa 26107704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 52617671 - 52617797
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||| |||||||||||||||||||||||||    
T  52617671 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaattcgataatctcagagagttaacactcgatttgcggaacattgattacg 52617770  T
Q  663 acatactctctatcataatattctcaa 689  Q
    | ||||||| ||| |||||||||||||    
T  52617771 atatactctgtataataatattctcaa 52617797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 54629344 - 54629226
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| ||| ||||||||||||||||||||||||||||     
T  54629344 tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcaatttgcggaacattgattacgacatactt 54629245  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||||||||    
T  54629244 tctatcataatattctcaa 54629226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 577 - 689
Target Start/End: Complemental strand, 45863310 - 45863198
Alignment:
Q  577 tcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatc 676  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45863310 tcagagttaacacgatttttgtacctaaaaacgtaaactctttaatctcagagagttaacactcgatttgcggaacattgattacgacatactctctatc 45863211  T
Q  677 ataatattctcaa 689  Q
    |||||||||||||    
T  45863210 ataatattctcaa 45863198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 18750144 - 18750018
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||   |||| || |||||||||| |||||||||||||||||||||||||    
T  18750144 aaaccgagtttacctcagagttaacatgatttttgtacctaaaaacgtaaactcagtaatatcagagagttaacactcgatttgcggaacattgattacg 18750045  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||| |||||||||||||||||||||    
T  18750044 acatattctctatcataatattctcaa 18750018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 39038591 - 39038465
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||||| ||||||||| |||||||||||||||    
T  39038591 aaaccgagtttacctcagagttaacaccatttttgtacctaaaaacgtaaattcgataatctcagagagttaacactcgatttgtggaacattgattacg 39038492  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||||| ||| |||||||||||||    
T  39038491 acatactctgtataataatattctcaa 39038465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 50903008 - 50903134
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||| ||||| ||||| |||||||||||||    
T  50903008 aaaccgagtttacctcagagttaacacgatttttgtacataaaaacgtaaactcgatattctcggagagttaacactcgacttgcgaaacattgattacg 50903107  T
Q  663 acatactctctatcataatattctcaa 689  Q
     |||||||||||| |||| ||||||||    
T  50903108 gcatactctctataataacattctcaa 50903134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 571 - 688
Target Start/End: Complemental strand, 20833390 - 20833267
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgc------ggaacattgattacgac 664  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||      ||||||||||||| |||    
T  20833390 tttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcagagagttaacactcgatttgcggaagcggaacattgattatgac 20833291  T
Q  665 atactctctatcataatattctca 688  Q
    ||||||||||| ||||||||||||    
T  20833290 atactctctataataatattctca 20833267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 4962786 - 4962871
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||||  |||||||||||||||  |||||||||||||||||| ||||| ||  |||||||||||||| |||||||||||||||    
T  4962786 tttacctccaagttaacacgattttgatacctaaaaacgtaaactcgataaacttagagagttaacgctcaatttgcggaacattg 4962871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 571 - 659
Target Start/End: Complemental strand, 7665637 - 7665549
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgatt 659  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||| | |||  |||| |||||||| ||||||||| ||||||||||||    
T  7665637 tttacctccgagttaacacgattttggtagctaaaaacgtaaactaggtaaattcggcgagttaacactcgatttgtggaacattgatt 7665549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 571 - 657
Target Start/End: Original strand, 21386539 - 21386625
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattga 657  Q
    ||||||||  |||||||||||||||  |||||||||| ||||||| | ||| |||||||||||||| ||||||||| ||||||||||    
T  21386539 tttacctctaagttaacacgattttgatacctaaaaatgtaaactcggtaaactcggagagttaacactcgatttggggaacattga 21386625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 632 - 689
Target Start/End: Complemental strand, 32580573 - 32580516
Alignment:
Q  632 ttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  32580573 ttaacactcgatttgcggaacattgattacaatatactctctatcataatattctcaa 32580516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 563 - 655
Target Start/End: Original strand, 7437618 - 7437710
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacatt 655  Q
    ||||||| |||| ||| | |||||||||||||| ||||||||| | |||||||   ||| |||||||||||||| ||||||||||||||||||    
T  7437618 aaaccgagtttatctccgtgttaacacgattttggtacctaaacaagtaaactcagtaaactcggagagttaacactcgatttgcggaacatt 7437710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 563 - 613
Target Start/End: Complemental strand, 16155218 - 16155168
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaa 613  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  16155218 aaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaa 16155168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 655
Target Start/End: Complemental strand, 43172973 - 43172889
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacatt 655  Q
    |||||||| |||| ||||||||||| ||||||||| || |||||| ||||| ||   |||||||||  |||||||||||||||||    
T  43172973 tttacctccgagtcaacacgattttggtacctaaacacataaactcgataaacttaaagagttaacattcgatttgcggaacatt 43172889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 571 - 660
Target Start/End: Complemental strand, 25049917 - 25049837
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgatta 660  Q
    |||||||| ||||| |||||||||| |||||||||||||||||         ||||| |||||||| ||||||||| |||||||||||||    
T  25049917 tttacctccgagttgacacgattttggtacctaaaaacgtaaa---------ctcggcgagttaacactcgatttgtggaacattgatta 25049837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 659
Target Start/End: Complemental strand, 49296162 - 49296074
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgatt 659  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| ||||||||||||    
T  49296162 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattgatt 49296074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 667
Target Start/End: Original strand, 34483813 - 34483852
Alignment:
Q  628 agagttaacgctcgatttgcggaacattgattacgacata 667  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  34483813 agagttaacactcgatttgtggaacattgattacgacata 34483852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 20833450 - 20833416
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  20833450 gtttaccgagtgttaactcagtcaaactcgttaaa 20833416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 23753036 - 23753070
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  23753036 gtttaccgagtgttaactcagtcaaactggttaaa 23753070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 26107882 - 26107848
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  26107882 gtttaccgagtgttaactcagtcaaactcgttaaa 26107848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 34483745 - 34483779
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  34483745 gtttaccgagtgttaactcagtcaaactcgttaaa 34483779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 40897684 - 40897650
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  40897684 gtttaccgagtgttaactcagtcaaactcgttaaa 40897650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 50902956 - 50902990
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  50902956 gtttaccgagtgttaactcagtcaaactcgttaaa 50902990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 51737334 - 51737368
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  51737334 gtttaccgagtgttaactcagtcaaactcgttaaa 51737368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 52810911 - 52810877
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  52810911 gtttaccgagtgttaactcagtcaaactcgttaaa 52810877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 8598705 - 8598620
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||    
T  8598705 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 8598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 558
Target Start/End: Complemental strand, 18750196 - 18750163
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaa 558  Q
    |||||||||||||||||||||||||||| |||||    
T  18750196 gtttaccgagtgttaactcagtcaaactcgttaa 18750163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 558
Target Start/End: Complemental strand, 48379703 - 48379670
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaa 558  Q
    |||||||||||||||||||||||||||| |||||    
T  48379703 gtttaccgagtgttaactcagtcaaactcgttaa 48379670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 1e-55; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 7027406 - 7027280
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  7027406 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 7027307  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  7027306 acatactctctatcataatattctcaa 7027280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 28739993 - 28740119
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  28739993 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacataaactcggtaatctcggagagttaacactcgatttgcggaacattgattacg 28740092  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||| |||||||||||||||||||||    
T  28740093 acatattctctatcataatattctcaa 28740119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 513 - 685
Target Start/End: Complemental strand, 28845154 - 28844966
Alignment:
Q  513 gtcaagttacacg--tttaccgagtgttaactcagtcaaacttgttaaatct--------------aaaccgattttacctcagagttaacacgattttt 596  Q
    |||||||||||||  ||||||||||||||||||||||||||| |||||| ||              ||||||||||||||||||||||||||||||||||    
T  28845154 gtcaagttacacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcagagttaacacgattttt 28845055  T
Q  597 gtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattc 685  Q
    |||||||||||| |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28845054 gtacctaaaaacataaactcgataatctcggagagttaacactcgatttgcggatcattgattacgacatactctctatcataatattc 28844966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 525 - 689
Target Start/End: Original strand, 13833066 - 13833244
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaatct--------------aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgt 610  Q
    ||||||||||||||||||||||||||||||||||||||              |||  || ||||||||||||||||||||||||||||||||||||||||    
T  13833066 gtttaccgagtgttaactcagtcaaacttgttaaatcttctgattttactagaaattgagtttacctcagagttaacacgatttttgtacctaaaaacgt 13833165  T
Q  611 aaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||| |||||||||| |||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13833166 aaactcgataatctcgaagagttaacattcaatttgcggaacattgattacgacatactctctatcataatattctcaa 13833244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 379433 - 379307
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| | | |||||||  ||||||||| |||||||||||||||||||||||||    
T  379433 aaaccgaatttacctcagagttaacacgatttttgtacctaaaaacgtaaattcggtaatctcaaagagttaacactcgatttgcggaacattgattacg 379334  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  379333 acatactctctatcataatattctcaa 379307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 6224276 - 6224402
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| || |||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  6224276 aaaccgagttcacctaagagttaacacgatttgtgtacctaaaaacgtaaactcgataatctcggagagttaacactcgatttgcggaacattgattacg 6224375  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||| ||||    
T  6224376 acatactctctatcataatattttcaa 6224402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 567 - 689
Target Start/End: Complemental strand, 10657929 - 10657807
Alignment:
Q  567 cgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacat 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||| |||||||| |||||||||||||||||| |    
T  10657929 cgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcagagagttaacactcgatttacggaacattgattacgactt 10657830  T
Q  667 actctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||    
T  10657829 actctctatcataatattctcaa 10657807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 18177774 - 18177648
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||| |||||||| ||||||||||||||||    
T  18177774 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcgaagatttaacactcgatttacggaacattgattacg 18177675  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||| |||||||||||||||||||    
T  18177674 acatactttctatcataatattctcaa 18177648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 26789288 - 26789162
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||| |||||||||| ||||||||||||||    
T  26789288 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtcaactcgataatctcggagatttaacactcgatttgcagaacattgattacg 26789189  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||| ||||||||    
T  26789188 acatactctctatcataaaattctcaa 26789162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 25288666 - 25288540
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||   ||||||||||||||||||||||||    
T  25288666 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaatattcgatttgcggaacattgattacg 25288567  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||| |||||||||||||||||||||    
T  25288566 acatattctctatcataatattctcaa 25288540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 571 - 689
Target Start/End: Complemental strand, 33136111 - 33135995
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    |||||||||||||||||||||||||||||||||||||| |||||| | |  |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  33136111 tttacctcagagttaacacgatttttgtacctaaaaacataaactcggt--tctcagagagttaacactcgatttgcggaacattgattacgacatactc 33136014  T
Q  671 tctatcataatattctcaa 689  Q
    | ||| |||||||||||||    
T  33136013 tgtataataatattctcaa 33135995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 571 - 682
Target Start/End: Original strand, 214964 - 215075
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| | | |||||||||| ||||||| ||| |||||||||||||||||||| ||||||||    
T  214964 tttaccttagagttaacacgattttggtacctaaaaacgtaaattcggtaatctcggaaagttaacactcaatttgcggaacattgattacaacatactc 215063  T
Q  671 tctatcataata 682  Q
    ||||||||||||    
T  215064 tctatcataata 215075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 591 - 689
Target Start/End: Complemental strand, 3464115 - 3464017
Alignment:
Q  591 atttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||||||||||||||| ||||||| | |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3464115 atttttgtacctaaaaatgtaaactcggtaatctcggagagttaacacacgatttgcggaacattaattacgacatactctctatcataatattctcaa 3464017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 563 - 674
Target Start/End: Complemental strand, 3575344 - 3575233
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||   |||||||||| ||||||   |||||||| || |||||||||| |    
T  3575344 aaaccgattttacctcagagttaacatgatttttgtacctaaaaacgtaaactcagtaatctcggatagttaatattcgatttgagggacattgattatg 3575245  T
Q  663 acatactctcta 674  Q
    ||||| ||||||    
T  3575244 acatattctcta 3575233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 15224276 - 15224191
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| |||||||||||||||| ||||||||| ||||||| ||| ||| ||||||| |||||| |||||||||||||||||||    
T  15224276 tttacctctgagttaacacgattttggtacctaaacacgtaaaattggtaaactcggagtgttaacactcgatttgcggaacattg 15224191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 628 - 689
Target Start/End: Complemental strand, 43825327 - 43825266
Alignment:
Q  628 agagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43825327 agagttaacactcgatttgcggaacattgattatgacatactctctatcataatattctcaa 43825266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 563 - 659
Target Start/End: Original strand, 2308761 - 2308857
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgatt 659  Q
    ||||||| |||||||| |||||||||||||||| |||| |||||||||||| || |||| ||||| |||||||| ||||||||  | ||||||||||    
T  2308761 aaaccgaatttacctccgagttaacacgattttggtacataaaaacgtaaatttaataaactcggcgagttaacactcgatttatgaaacattgatt 2308857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 658
Target Start/End: Complemental strand, 34342292 - 34342197
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgat 658  Q
    ||||||| ||||||| || | ||||| |  ||| ||||||||||||||||||| | ||| ||| |||||||||| |||||||||||||||||||||    
T  34342292 aaaccgagtttaccttagtgctaacatggatttggtacctaaaaacgtaaactcggtaaactcagagagttaacactcgatttgcggaacattgat 34342197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 31847273 - 31847359
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaa-cttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| |||||| || ||||||  |||||||||||||||| || ||||| |||||||||||||| ||||||||| |||||||||    
T  31847273 tttacctccgagttaccatgattttaatacctaaaaacgtaaaactcgataaactcggagagttaacactcgatttgaggaacattg 31847359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 563 - 655
Target Start/End: Complemental strand, 40829690 - 40829596
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataa--tctcggagagttaacgctcgatttgcggaacatt 655  Q
    ||||||| |||||||| ||||||||||||||||  |||||||||| ||| ||| | |||  ||||||||||||||| ||| |||| |||||||||    
T  40829690 aaaccgagtttacctccgagttaacacgattttgatacctaaaaatgtagactcggtaaactctcggagagttaacactcaatttacggaacatt 40829596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 628 - 689
Target Start/End: Complemental strand, 43078977 - 43078916
Alignment:
Q  628 agagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||||||| |||||||||| || |||||||||||| ||| ||||||| |||||||||||||    
T  43078977 agagttaacactcgatttgcagatcattgattacgatataatctctataataatattctcaa 43078916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 615
Target Start/End: Original strand, 35404366 - 35404418
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaact 615  Q
    ||||||| ||||||||  ||||||||||||||  |||||||||||||||||||    
T  35404366 aaaccgagtttacctctaagttaacacgatttcggtacctaaaaacgtaaact 35404418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 3575396 - 3575362
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  3575396 gtttaccgagtgttaactcagtcaaactcgttaaa 3575362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 6224224 - 6224258
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  6224224 gtttaccgagtgttaactcagtcaaactcgttaaa 6224258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 7027458 - 7027424
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  7027458 gtttaccgagtgttaactcagtcaaactcgttaaa 7027424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 563 - 613
Target Start/End: Original strand, 11153397 - 11153447
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaa 613  Q
    ||||||| |||||||| |||||||||||||||  | |||||||||||||||    
T  11153397 aaaccgagtttacctccgagttaacacgatttcagcacctaaaaacgtaaa 11153447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 28739941 - 28739975
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  28739941 gtttaccgagtgttaactcagtcaaactcgttaaa 28739975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 43825395 - 43825361
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  43825395 gtttaccgagtgttaactcagtcaaactcgttaaa 43825361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 558
Target Start/End: Complemental strand, 379485 - 379452
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaa 558  Q
    |||||||||||||||||||||||||||| |||||    
T  379485 gtttaccgagtgttaactcagtcaaactcgttaa 379452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 18899983 - 18900068
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||    
T  18899983 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 18900068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 1e-55; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 6313078 - 6312952
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  6313078 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 6312979  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  6312978 acatactctctatcataatattctcaa 6312952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 25612594 - 25612468
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  25612594 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 25612495  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  25612494 acatactctctatcataatattctcaa 25612468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 29396130 - 29396256
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  29396130 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 29396229  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  29396230 acatactctctatcataatattctcaa 29396256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 9322204 - 9322330
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||    
T  9322204 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttacggaacattgattacg 9322303  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  9322304 acatactctctatcataatattctcaa 9322330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 45273069 - 45272943
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||     
T  45273069 aaaccgagtttacctcagagttaacacaatttttgtacctaaaaacgtaaactcgataatctcggagagttaacactcgatttgcggaacattgattaca 45272970  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  45272969 acatactctctatcataatattctcaa 45272943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 51702097 - 51701971
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| ||||| |||||||||||||||||||||||||    
T  51702097 aaaccgattttacctcagagttaacacaatttttgtacctaaaaatgtaaactcgataatctcggagatttaacactcgatttgcggaacattgattacg 51701998  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||||||||    
T  51701997 acatactctctatcataatattctcaa 51701971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 564 - 689
Target Start/End: Original strand, 25830946 - 25831071
Alignment:
Q  564 aaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacga 663  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||    
T  25830946 aaccgattttatctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgtggaacattgattacga 25831045  T
Q  664 catactctctatcataatattctcaa 689  Q
    ||||||||||||||||||||||||||    
T  25831046 catactctctatcataatattctcaa 25831071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 567 - 689
Target Start/End: Original strand, 8140933 - 8141055
Alignment:
Q  567 cgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacat 666  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||| |    
T  8140933 cgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcgataatctcggagagttaacactcgatttgcggaacattgattgcgacgt 8141032  T
Q  667 actctctatcataatattctcaa 689  Q
    |||||||||||||||||| ||||    
T  8141033 actctctatcataatattttcaa 8141055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 571 - 689
Target Start/End: Original strand, 15834738 - 15834856
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  15834738 tttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacgacatactc 15834837  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||||||||    
T  15834838 tctatcataatattctcaa 15834856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 5494794 - 5494920
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||| ||||||||||||||||||||     
T  5494794 aaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactcaatttgcggaacattgattaca 5494893  T
Q  663 acatactctctatcataatattctcaa 689  Q
    || ||||||||||||||||||||||||    
T  5494894 acgtactctctatcataatattctcaa 5494920  T

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Target: chr1; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 571 - 689
Target Start/End: Original strand, 38535850 - 38535968
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| | |||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  38535850 tttacctcagagttaacacaatttttgtaactaaaaacgtaaactcggtaatcttggagagttaaaactcgatttgcggaacattgattacgacatactc 38535949  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||||||||    
T  38535950 tctatcataatattctcaa 38535968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 571 - 689
Target Start/End: Original strand, 38558068 - 38558186
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| | |||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  38558068 tttacctcagagttaacacaatttttgtaactaaaaacgtaaactcggtaatcttggagagttaaaactcgatttgcggaacattgattacgacatactc 38558167  T
Q  671 tctatcataatattctcaa 689  Q
    |||||||||||||||||||    
T  38558168 tctatcataatattctcaa 38558186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 48177139 - 48177265
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||   ||||||| |||||||||  ||||||||||| |||||||||||||    
T  48177139 aaaccgattttacctcagagttaacacgatttttctacctaaaaacgtaaactcagtaatctcagagagttaatactcgatttgcgaaacattgattacg 48177238  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||||||||||||||||||||| ||||    
T  48177239 acatactctctatcataatattatcaa 48177265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 18798954 - 18798833
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||     |||||||||||||||||| ||||||||||||||||||    
T  18798954 aaaccgattttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggta-----ggagagttaacgctcgatctgcggaacattgattacg 18798860  T
Q  663 acatactctctatcataatattctcaa 689  Q
    |||| ||||||||||||||||||||||    
T  18798859 acattctctctatcataatattctcaa 18798833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 563 - 658
Target Start/End: Complemental strand, 46328488 - 46328393
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgat 658  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||| |||||||||||||||||||||    
T  46328488 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagaattaacactcgatttgcggaacattgat 46328393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 591 - 689
Target Start/End: Original strand, 28387141 - 28387239
Alignment:
Q  591 atttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    |||||||||| |||||| ||||||| | |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28387141 atttttgtacataaaaatgtaaactcggtaatctcggagagttaacacacgatttgcggaacattgattacgacatactctctatcataatattctcaa 28387239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 571 - 659
Target Start/End: Original strand, 48966545 - 48966633
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgatt 659  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||   ||| |||| ||||||||| ||||||||||||||||||||||    
T  48966545 tttacctcagagttaacacgattttggtacctaaacacgtaaactcagtaaactcgaagagttaaccctcgatttgcggaacattgatt 48966633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 563 - 655
Target Start/End: Original strand, 3583602 - 3583694
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacatt 655  Q
    ||||||| ||||| ||  ||||||||||||||  ||||||||||||||||||| | ||| |||||||||||||| ||||||||||||||||||    
T  3583602 aaaccgagtttacttctaagttaacacgatttcggtacctaaaaacgtaaactcggtaaactcggagagttaacactcgatttgcggaacatt 3583694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 49453114 - 49453200
Alignment:
Q  571 tttacctcagagttaacacgatttttg-tacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||||||||||||||||||||||| |||||||| || |||||| | ||| |||||| ||||||| |||||||||||||||||||    
T  49453114 tttacctcagagttaacacgatttttggtacctaaacacataaactaggtaaactcggacagttaacactcgatttgcggaacattg 49453200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 47371629 - 47371714
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| |||||||||||||||| ||||||||  ||||||||| ||||| ||| ||| |||||| ||||||||||| |||||||    
T  47371629 tttacctccgagttaacacgattttggtacctaagtacgtaaactcgataaactcagagtgttaacactcgatttgcgaaacattg 47371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 563 - 615
Target Start/End: Original strand, 32760145 - 32760197
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaact 615  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  32760145 aaaccgagtttacctcagagttaacacgattttggtacctaaaaacgtaaact 32760197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 563 - 615
Target Start/End: Complemental strand, 49231509 - 49231457
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaact 615  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  49231509 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaacataaact 49231457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 574 - 656
Target Start/End: Original strand, 5209425 - 5209507
Alignment:
Q  574 acctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||| |||||||||||||||| ||||||||| |||||||   ||||| ||| ||| |||||| |||||||||||||||||||    
T  5209425 acctccgagttaacacgattttggtacctaaacacgtaaaaacgataaactcagagtgttaacactcgatttgcggaacattg 5209507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 35177264 - 35177350
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagtt-aacgctcgatttgcggaacattg 656  Q
    |||||||| || ||||||||||||| |||||||||||| |||| ||||||| ||||||| ||| ||| ||||||||||||| |||||    
T  35177264 tttacctctgaattaacacgattttggtacctaaaaacataaatttgataaactcggagtgttaaacactcgatttgcggaccattg 35177350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 563 - 655
Target Start/End: Original strand, 28403992 - 28404084
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacatt 655  Q
    ||||||| |||||||   ||||||||||||||| ||||||||||| |||||||   |||  ||| ||||||||| ||||||||||||||||||    
T  28403992 aaaccgaatttaccttcaagttaacacgattttggtacctaaaaatgtaaactcagtaaattcgaagagttaacactcgatttgcggaacatt 28404084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 571 - 646
Target Start/End: Complemental strand, 52182393 - 52182318
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttg 646  Q
    |||||||| || || |||||||||  ||||||||||||||||||| ||||| ||||| |||||||| |||||||||    
T  52182393 tttacctccgaattgacacgatttcagtacctaaaaacgtaaactcgataaactcggcgagttaacactcgatttg 52182318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 645
Target Start/End: Complemental strand, 25253568 - 25253486
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgattt 645  Q
    ||||||| ||||||||||  ||||||||||||| |||||||||||| |||||| | ||| ||| |||| ||||| ||||||||    
T  25253568 aaaccgaatttacctcagtattaacacgattttggtacctaaaaacataaactcggtaaactcagagaattaacactcgattt 25253486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 655
Target Start/End: Original strand, 49971650 - 49971734
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacatt 655  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||| | ||| ||| |  |||||||  |||||||| ||||||||    
T  49971650 tttacctccgagttgacacgattttggtacctaaaaacgtaaactcggtaaactcagtaagttaacattcgatttgtggaacatt 49971734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 659
Target Start/End: Complemental strand, 8147384 - 8147296
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgatt 659  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| ||||||||||||    
T  8147384 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgctgagttgacacgcgatttgtggaacattgatt 8147296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 618 - 656
Target Start/End: Complemental strand, 3593275 - 3593237
Alignment:
Q  618 ataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  3593275 ataaactcggagagttaacactcgatttgcggaacattg 3593237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 6313130 - 6313096
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  6313130 gtttaccgagtgttaactcagtcaaactcgttaaa 6313096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 15834678 - 15834712
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  15834678 gtttaccgagtgttaactcagtcaaactcgttaaa 15834712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 563 - 621
Target Start/End: Complemental strand, 15927374 - 15927316
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataa 621  Q
    ||||||| ||||||||||||||||||| ||||| |||| |||| || |||||| |||||    
T  15927374 aaaccgaatttacctcagagttaacacaattttggtacttaaacacttaaactcgataa 15927316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 25612646 - 25612612
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  25612646 gtttaccgagtgttaactcagtcaaactcgttaaa 25612612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 571 - 613
Target Start/End: Original strand, 27257912 - 27257954
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaa 613  Q
    |||||||| ||||| |||||||||| |||||||||||||||||    
T  27257912 tttacctcggagttgacacgattttggtacctaaaaacgtaaa 27257954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 29219675 - 29219641
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  29219675 gtttaccgagtgttaactcagtcaaactcgttaaa 29219641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Original strand, 29396078 - 29396112
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  29396078 gtttaccgagtgttaactcagtcaaactcgttaaa 29396112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 51702149 - 51702115
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  51702149 gtttaccgagtgttaactcagtcaaactcgttaaa 51702115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 581 - 647
Target Start/End: Complemental strand, 51902009 - 51901943
Alignment:
Q  581 agttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgc 647  Q
    ||||||||||||||  ||| |||||||| |||||||||||  ||| |||| ||||| ||||||||||    
T  51902009 agttaacacgatttcggtatctaaaaacataaacttgatagactcagagaattaacactcgatttgc 51901943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Original strand, 1243360 - 1243445
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||    
T  1243360 tttacctccgagttaacacgtttttagcacctaaacacgtaaactaggtaaactcgccgagttgacacgcgatttgtggaacattg 1243445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 4005134 - 4005049
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||    
T  4005134 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 4005049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 656
Target Start/End: Complemental strand, 9192091 - 9192006
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||| ||||||||||| |||| | ||||||| ||||||||| | ||| ||||  ||||| || | ||||||| |||||||||    
T  9192091 tttacctccgagttaacacgtttttagcacctaaacacgtaaactcggtaaactcgccgagttgacacgcgatttgtggaacattg 9192006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 558
Target Start/End: Original strand, 38535790 - 38535823
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaa 558  Q
    |||||||||||||||||||||||||||| |||||    
T  38535790 gtttaccgagtgttaactcagtcaaactcgttaa 38535823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 525 - 558
Target Start/End: Original strand, 38558008 - 38558041
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaa 558  Q
    |||||||||||||||||||||||||||| |||||    
T  38558008 gtttaccgagtgttaactcagtcaaactcgttaa 38558041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 559
Target Start/End: Complemental strand, 51902078 - 51902045
Alignment:
Q  526 tttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||| |||||||||||||||||||||||||||||    
T  51902078 tttatcgagtgttaactcagtcaaacttgttaaa 51902045  T

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Target: scaffold1504 (Bit Score: 107; Significance: 3e-53; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 563 - 689
Target Start/End: Complemental strand, 1369 - 1243
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||    
T  1369 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgtggaacattgattacg 1270  T
Q  663 acatactctctatcataatattctcaa 689  Q
    ||||||| |||||||||||||||||||    
T  1269 acatactttctatcataatattctcaa 1243  T

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Target: scaffold0042 (Bit Score: 103; Significance: 7e-51; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 57763 - 57889
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||| |||||    
T  57763 aaaccgagtttacctcagagttaacacgatttttgtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcggaacattggttacg 57862  T
Q  663 acatactctctatcataatattctcaa 689  Q
    | |||||||||||||||||||||||||    
T  57863 aaatactctctatcataatattctcaa 57889  T

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Target: scaffold0543 (Bit Score: 100; Significance: 5e-49; HSPs: 2)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 571 - 686
Target Start/End: Complemental strand, 11019 - 10904
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacgacatactc 670  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  11019 tttacctcagagttaacacgatttttgtacctaaaaatgtaaactcggtaatctcggagagttaacactcgatttgcggaacattgattacgacatactc 10920  T
Q  671 tctatcataatattct 686  Q
    ||||||||||||||||    
T  10919 tctatcataatattct 10904  T

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Target: scaffold0543; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 525 - 559
Target Start/End: Complemental strand, 11079 - 11045
Alignment:
Q  525 gtttaccgagtgttaactcagtcaaacttgttaaa 559  Q
    |||||||||||||||||||||||||||| ||||||    
T  11079 gtttaccgagtgttaactcagtcaaactcgttaaa 11045  T

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Target: scaffold0110 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 563 - 689
Target Start/End: Original strand, 39334 - 39460
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattgattacg 662  Q
    ||||||| || ||||||| |||||||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||||| || |||||||||     
T  39334 aaaccgagttgacctcagggttaacacgattttggtacctaaaaacgtaaactcggtaatctcggagagttaacactcgatttgcgaaaaattgattaca 39433  T
Q  663 acatactctctatcataatattctcaa 689  Q
     ||||||||||||||||||| ||||||    
T  39434 tcatactctctatcataatactctcaa 39460  T

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Target: scaffold1128 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 563 - 656
Target Start/End: Original strand, 951 - 1044
Alignment:
Q  563 aaaccgattttacctcagagttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    ||||||| |||||||| |||||||||||||||| ||||||||| ||||||||| | ||| ||| ||| |||||| |||||||||||||||||||    
T  951 aaaccgagtttacctccgagttaacacgattttggtacctaaacacgtaaactcggtaaactcagagtgttaacactcgatttgcggaacattg 1044  T

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Target: scaffold0383 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 628 - 689
Target Start/End: Original strand, 16744 - 16805
Alignment:
Q  628 agagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||||||| |||||||| || ||||||||||||| ||||||||||||||||||||||||||    
T  16744 agagttaacactcgatttacgaaacattgattacgtcatactctctatcataatattctcaa 16805  T

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Target: scaffold0306 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 628 - 689
Target Start/End: Complemental strand, 14345 - 14284
Alignment:
Q  628 agagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||||||| |||||||| || ||||||||||||| ||||||||||||||||||||||||||    
T  14345 agagttaacactcgatttacgaaacattgattacgtcatactctctatcataatattctcaa 14284  T

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Target: scaffold0152 (Bit Score: 46; Significance: 8e-17; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 628 - 689
Target Start/End: Complemental strand, 28821 - 28760
Alignment:
Q  628 agagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||||||| |||||||| || ||||||||||||| ||||||||||||||||||||||||||    
T  28821 agagttaacactcgatttacgaaacattgattacgtcatactctctatcataatattctcaa 28760  T

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Target: scaffold0152; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 628 - 689
Target Start/End: Original strand, 20980 - 21041
Alignment:
Q  628 agagttaacgctcgatttgcggaacattgattacgacatactctctatcataatattctcaa 689  Q
    ||||||||| |||||||| |  ||||||||||||| ||||||||||||||||||||||||||    
T  20980 agagttaacactcgatttacaaaacattgattacgtcatactctctatcataatattctcaa 21041  T

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Target: scaffold0013 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 581 - 656
Target Start/End: Complemental strand, 89316 - 89241
Alignment:
Q  581 agttaacacgatttttgtacctaaaaacgtaaacttgataatctcggagagttaacgctcgatttgcggaacattg 656  Q
    |||||||||||| || |||||||||||| |||||| ||||| |||  ||||||||| |||||||| ||||||||||    
T  89316 agttaacacgatattggtacctaaaaacttaaactcgataaactcacagagttaacactcgatttacggaacattg 89241  T

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Target: scaffold0347 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 15165 - 15128
Alignment:
Q  562 taaaccgattttacctcagagttaacacgatttttgta 599  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15165 taaaccgattttacctcagagttaacacgatttttgta 15128  T

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Target: scaffold0573 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 571 - 615
Target Start/End: Complemental strand, 8902 - 8858
Alignment:
Q  571 tttacctcagagttaacacgatttttgtacctaaaaacgtaaact 615  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||    
T  8902 tttacctcagagttaacacgattttggtacctaaacatgtaaact 8858  T

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