View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5350_low_2 (Length: 374)

Name: NF5350_low_2
Description: NF5350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5350_low_2
NF5350_low_2
[»] chr7 (23 HSPs)
chr7 (109-253)||(21597761-21597905)
chr7 (33-97)||(1261174-1261238)
chr7 (34-93)||(43539106-43539165)
chr7 (33-97)||(46370980-46371044)
chr7 (39-89)||(23205368-23205418)
chr7 (33-95)||(45046215-45046277)
chr7 (30-95)||(39280818-39280883)
chr7 (33-93)||(7670433-7670493)
chr7 (33-93)||(10244726-10244786)
chr7 (33-93)||(18773758-18773818)
chr7 (32-92)||(34000260-34000320)
chr7 (23-98)||(19416503-19416578)
chr7 (30-97)||(29053039-29053106)
chr7 (40-98)||(10421994-10422052)
chr7 (32-93)||(25251508-25251569)
chr7 (33-98)||(27462433-27462498)
chr7 (64-93)||(27833403-27833432)
chr7 (37-98)||(35751368-35751429)
chr7 (44-93)||(45151387-45151436)
chr7 (33-93)||(5458073-5458133)
chr7 (30-98)||(31292766-31292834)
chr7 (64-96)||(42753526-42753558)
chr7 (62-98)||(47607907-47607943)
[»] chr8 (35 HSPs)
chr8 (34-97)||(24195249-24195312)
chr8 (33-98)||(29293176-29293241)
chr8 (34-94)||(574384-574444)
chr8 (33-97)||(27718892-27718956)
chr8 (33-93)||(28439958-28440018)
chr8 (33-97)||(39138996-39139060)
chr8 (33-97)||(40482338-40482402)
chr8 (31-81)||(41625191-41625241)
chr8 (33-98)||(3650519-3650584)
chr8 (33-98)||(6038272-6038337)
chr8 (33-98)||(39433409-39433474)
chr8 (49-97)||(6439011-6439059)
chr8 (33-97)||(16823183-16823247)
chr8 (37-93)||(18422455-18422511)
chr8 (33-89)||(26914077-26914133)
chr8 (33-93)||(32115408-32115468)
chr8 (34-98)||(40795377-40795441)
chr8 (47-98)||(19260576-19260627)
chr8 (33-92)||(28580943-28581002)
chr8 (30-80)||(10320492-10320542)
chr8 (60-93)||(5208195-5208228)
chr8 (60-93)||(12800902-12800935)
chr8 (39-96)||(24202156-24202212)
chr8 (33-98)||(29716697-29716762)
chr8 (33-94)||(40316855-40316916)
chr8 (58-98)||(10656439-10656479)
chr8 (33-93)||(10871896-10871956)
chr8 (33-93)||(19163538-19163598)
chr8 (33-89)||(20469317-20469373)
chr8 (37-81)||(24687782-24687826)
chr8 (34-98)||(32051529-32051593)
chr8 (33-93)||(32223881-32223941)
chr8 (33-93)||(33105390-33105450)
chr8 (34-98)||(33359786-33359850)
chr8 (33-89)||(44293574-44293630)
[»] chr1 (43 HSPs)
chr1 (33-96)||(39252256-39252319)
chr1 (34-93)||(13401597-13401656)
chr1 (33-98)||(25532972-25533037)
chr1 (35-77)||(18648419-18648461)
chr1 (30-92)||(19620572-19620634)
chr1 (33-95)||(26834519-26834581)
chr1 (32-93)||(34595869-34595931)
chr1 (33-98)||(563200-563265)
chr1 (36-89)||(4859085-4859138)
chr1 (34-91)||(12213993-12214050)
chr1 (57-98)||(49431990-49432031)
chr1 (33-93)||(3693798-3693858)
chr1 (33-93)||(26755615-26755675)
chr1 (33-93)||(32950763-32950823)
chr1 (60-96)||(39252145-39252181)
chr1 (33-97)||(41769813-41769877)
chr1 (37-80)||(32826720-32826763)
chr1 (34-93)||(32870244-32870303)
chr1 (30-89)||(41677596-41677655)
chr1 (33-91)||(3528473-3528531)
chr1 (33-75)||(28213912-28213954)
chr1 (60-98)||(33825840-33825878)
chr1 (60-98)||(33878912-33878950)
chr1 (60-93)||(8269370-8269403)
chr1 (33-93)||(15892796-15892857)
chr1 (33-98)||(16967191-16967256)
chr1 (34-98)||(21965888-21965953)
chr1 (33-94)||(23045190-23045251)
chr1 (60-97)||(24571623-24571660)
chr1 (32-89)||(34485875-34485932)
chr1 (33-86)||(36371049-36371102)
chr1 (33-98)||(41763152-41763217)
chr1 (36-93)||(50372363-50372420)
chr1 (45-93)||(1603684-1603732)
chr1 (33-89)||(9413797-9413853)
chr1 (33-93)||(18166601-18166661)
chr1 (33-97)||(37383789-37383853)
chr1 (33-93)||(43611423-43611483)
chr1 (33-93)||(44119474-44119534)
chr1 (30-98)||(45481489-45481557)
chr1 (33-97)||(46392232-46392296)
chr1 (33-93)||(47070847-47070907)
chr1 (33-97)||(48681931-48681995)
[»] chr4 (41 HSPs)
chr4 (35-97)||(39595935-39595997)
chr4 (33-93)||(18903760-18903820)
chr4 (33-93)||(5924648-5924708)
chr4 (33-93)||(14202481-14202541)
chr4 (33-93)||(50668339-50668399)
chr4 (33-93)||(54500568-54500628)
chr4 (33-92)||(160708-160767)
chr4 (34-93)||(6087747-6087806)
chr4 (34-93)||(19479479-19479538)
chr4 (33-92)||(50380839-50380898)
chr4 (27-92)||(8737722-8737787)
chr4 (33-98)||(49041978-49042043)
chr4 (33-98)||(54857612-54857677)
chr4 (34-98)||(3936627-3936691)
chr4 (34-93)||(20383488-20383547)
chr4 (60-91)||(31542617-31542648)
chr4 (34-93)||(39489606-39489665)
chr4 (33-83)||(6628303-6628353)
chr4 (32-98)||(7371545-7371611)
chr4 (35-93)||(11949765-11949823)
chr4 (64-98)||(25783446-25783480)
chr4 (64-94)||(49952570-49952600)
chr4 (33-98)||(32006499-32006564)
chr4 (24-89)||(35021473-35021538)
chr4 (33-98)||(35287504-35287569)
chr4 (64-93)||(43722795-43722824)
chr4 (37-98)||(47814248-47814309)
chr4 (35-88)||(53142607-53142660)
chr4 (65-93)||(897456-897484)
chr4 (33-85)||(2587710-2587762)
chr4 (33-89)||(6459930-6459986)
chr4 (33-93)||(7230279-7230339)
chr4 (33-93)||(9946426-9946486)
chr4 (34-98)||(10564462-10564526)
chr4 (33-93)||(16686174-16686234)
chr4 (64-96)||(17423176-17423208)
chr4 (33-93)||(20799396-20799456)
chr4 (33-93)||(21317340-21317400)
chr4 (35-95)||(22411765-22411825)
chr4 (33-89)||(24664997-24665053)
chr4 (33-97)||(36035833-36035897)
[»] chr3 (33 HSPs)
chr3 (34-97)||(31214634-31214697)
chr3 (30-92)||(47099038-47099100)
chr3 (36-97)||(17755123-17755184)
chr3 (36-97)||(19056443-19056504)
chr3 (30-98)||(2563925-2563993)
chr3 (33-97)||(4332665-4332729)
chr3 (33-93)||(43499877-43499937)
chr3 (37-97)||(47040892-47040952)
chr3 (42-93)||(31463492-31463543)
chr3 (47-93)||(33634511-33634557)
chr3 (34-91)||(3612186-3612243)
chr3 (45-93)||(21160063-21160111)
chr3 (34-89)||(39408270-39408325)
chr3 (33-92)||(48315027-48315086)
chr3 (33-83)||(10843793-10843843)
chr3 (64-98)||(46903938-46903972)
chr3 (60-93)||(2186429-2186462)
chr3 (64-93)||(7464493-7464522)
chr3 (33-98)||(16792971-16793036)
chr3 (33-98)||(25340921-25340986)
chr3 (34-79)||(36354535-36354580)
chr3 (45-89)||(7859498-7859542)
chr3 (33-89)||(7938723-7938779)
chr3 (45-93)||(16663238-16663286)
chr3 (33-73)||(20413774-20413814)
chr3 (33-97)||(21628886-21628950)
chr3 (33-93)||(27185476-27185536)
chr3 (34-98)||(38130956-38131020)
chr3 (33-97)||(38330750-38330814)
chr3 (41-97)||(39498365-39498421)
chr3 (33-89)||(48376834-48376890)
chr3 (53-97)||(50459727-50459771)
chr3 (33-89)||(53633623-53633679)
[»] chr2 (28 HSPs)
chr2 (39-88)||(17394679-17394728)
chr2 (33-93)||(346126-346186)
chr2 (33-78)||(8775269-8775314)
chr2 (33-98)||(33063985-33064050)
chr2 (33-93)||(25186244-25186304)
chr2 (33-97)||(29599938-29600002)
chr2 (33-93)||(31543011-31543071)
chr2 (45-81)||(34345369-34345405)
chr2 (34-93)||(13000685-13000744)
chr2 (33-92)||(22571868-22571927)
chr2 (34-93)||(40853820-40853879)
chr2 (64-98)||(4927446-4927480)
chr2 (34-80)||(41682402-41682448)
chr2 (35-88)||(17280955-17281008)
chr2 (64-93)||(25625746-25625775)
chr2 (33-98)||(26999109-26999174)
chr2 (64-97)||(33890174-33890207)
chr2 (45-98)||(41853376-41853429)
chr2 (60-93)||(44810731-44810764)
chr2 (33-93)||(10195664-10195724)
chr2 (30-82)||(12893257-12893309)
chr2 (45-97)||(19159952-19160004)
chr2 (33-93)||(19967417-19967477)
chr2 (33-93)||(20565077-20565137)
chr2 (33-93)||(28202296-28202356)
chr2 (33-93)||(29896296-29896356)
chr2 (45-97)||(32458313-32458365)
chr2 (34-93)||(33117406-33117466)
[»] chr6 (37 HSPs)
chr6 (33-89)||(9111046-9111102)
chr6 (31-91)||(24248162-24248222)
chr6 (34-96)||(23635713-23635775)
chr6 (32-89)||(4450260-4450317)
chr6 (33-98)||(5040830-5040895)
chr6 (58-98)||(10018423-10018463)
chr6 (33-93)||(13496115-13496175)
chr6 (34-98)||(14296954-14297018)
chr6 (33-77)||(26556382-26556426)
chr6 (33-92)||(12318766-12318825)
chr6 (30-89)||(24605692-24605751)
chr6 (34-93)||(24623319-24623378)
chr6 (33-80)||(30370165-30370212)
chr6 (30-80)||(3487927-3487977)
chr6 (30-80)||(12329272-12329322)
chr6 (33-95)||(12904317-12904379)
chr6 (33-87)||(20720789-20720843)
chr6 (33-98)||(4826289-4826354)
chr6 (40-93)||(8138460-8138513)
chr6 (33-78)||(9311947-9311992)
chr6 (60-97)||(9665336-9665373)
chr6 (57-94)||(12459742-12459779)
chr6 (64-93)||(16390459-16390488)
chr6 (33-98)||(32053787-32053852)
chr6 (33-98)||(34701146-34701211)
chr6 (34-98)||(655746-655810)
chr6 (33-81)||(7081668-7081716)
chr6 (33-93)||(7730663-7730723)
chr6 (33-93)||(8809305-8809365)
chr6 (33-93)||(9392670-9392730)
chr6 (45-81)||(17420732-17420768)
chr6 (33-93)||(20744137-20744197)
chr6 (65-93)||(22792942-22792970)
chr6 (33-93)||(25934808-25934868)
chr6 (32-80)||(28046193-28046241)
chr6 (34-98)||(28231422-28231486)
chr6 (33-93)||(33824880-33824940)
[»] chr5 (33 HSPs)
chr5 (33-97)||(3764535-3764599)
chr5 (33-93)||(13864343-13864403)
chr5 (33-97)||(27903112-27903176)
chr5 (33-97)||(30488924-30488988)
chr5 (33-96)||(22394034-22394097)
chr5 (30-92)||(27679494-27679556)
chr5 (36-93)||(9893673-9893730)
chr5 (32-89)||(26409251-26409308)
chr5 (33-98)||(40715946-40716011)
chr5 (45-93)||(5614776-5614824)
chr5 (34-98)||(37791160-37791224)
chr5 (33-85)||(42659576-42659628)
chr5 (33-96)||(5591259-5591321)
chr5 (34-97)||(6017384-6017447)
chr5 (30-93)||(8882401-8882464)
chr5 (27-89)||(5107251-5107313)
chr5 (33-95)||(11156836-11156898)
chr5 (33-98)||(42515806-42515872)
chr5 (64-93)||(4763188-4763217)
chr5 (60-93)||(12190018-12190051)
chr5 (39-80)||(15774012-15774053)
chr5 (60-93)||(20721076-20721109)
chr5 (33-98)||(22522798-22522863)
chr5 (60-97)||(29904447-29904484)
chr5 (33-97)||(2839797-2839861)
chr5 (34-94)||(10704332-10704392)
chr5 (33-97)||(13796329-13796393)
chr5 (33-93)||(18589869-18589929)
chr5 (33-81)||(24498583-24498631)
chr5 (40-88)||(25709739-25709787)
chr5 (33-89)||(37932329-37932385)
chr5 (33-93)||(39980507-39980567)
chr5 (33-93)||(42473893-42473953)
[»] scaffold0350 (1 HSPs)
scaffold0350 (33-98)||(1247-1312)
[»] scaffold0160 (1 HSPs)
scaffold0160 (33-98)||(22910-22975)
[»] scaffold0003 (1 HSPs)
scaffold0003 (33-93)||(361250-361310)
[»] scaffold0426 (1 HSPs)
scaffold0426 (31-89)||(5846-5904)
[»] scaffold0038 (1 HSPs)
scaffold0038 (34-98)||(31919-31983)


Alignment Details
Target: chr7 (Bit Score: 121; Significance: 6e-62; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 109 - 253
Target Start/End: Original strand, 21597761 - 21597905
Alignment:
Q  109 gtgtgccaagttaaatattgaaacatattgacacattaacccaacttgcttttaaggtagaaagtttgattttgaaattaaaagtgatggaaagtctaat 208  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  21597761 gtgtgccaagttaaatattgaaatatatcgacacattaacccaacttgcttttaaggtagaaattttgattttgaaataaaaagtgatggaaagtctaat 21597860  T
Q  209 tttgaatatttcaaaacacatatccaaacatgtcatccattatca 253  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||    
T  21597861 tttgaatatttccaaacacatatccaaacatgtcatacattatca 21597905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 1261174 - 1261238
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||| ||||||||||||||||||| ||  |||||||||||||| |||||| ||||||||||||    
T  1261174 cgtgagtttagttcagttgatataaacaaagcataatatatgtaaagtccggagttcaaactccg 1261238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 43539165 - 43539106
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||| ||||||||||  || ||| ||||||||||||||||||||||||||||||    
T  43539165 gtgagcttagctcagttgataggaacaatgcataatatatgtaaggtccggggttcaaac 43539106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 46370980 - 46371044
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||||||| ||||| |  ||||| ||||||||||  ||||||||||||||||||||||    
T  46370980 cgtgagcttagttcaattgatttggataatgcataatatatccaaggtccggggttcaaactccg 46371044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 23205418 - 23205368
Alignment:
Q  39 cttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||||||||| |||||||||||||| ||| ||||| ||||||||    
T  23205418 cttagttcagttgatatgaataatacataataaatgcaaggttcggggttc 23205368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 45046277 - 45046215
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactc 95  Q
    ||||||| ||| |||||||||||  | | ||||||||||||| ||||||||||||||||||||    
T  45046277 cgtgagcatagctcagttgatatggacagtacataatatatgcaaggtccggggttcaaactc 45046215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 39280883 - 39280818
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactc 95  Q
    |||||||| ||||| ||||||| ||  || ||| ||||||||||| ||||||||||||||||||||    
T  39280883 ccccgtgaacttagctcagttggtaagaacaatgcataatatatgcaaggtccggggttcaaactc 39280818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 7670433 - 7670493
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| | | || ||| ||||||||||| ||||||||||||||||||    
T  7670433 cgtgagcttagctcagttggtttgaacaatgcataatatatgcaaggtccggggttcaaac 7670493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 10244726 - 10244786
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| |||  | ||| ||||||||||| ||||||||||||||||||    
T  10244726 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 10244786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 18773818 - 18773758
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||  ||||||||||||||  | ||| ||||| ||||||||||||||||||||||||    
T  18773818 cgtgagcacagttcagttgatatggacaatgcataaaatatgtaaggtccggggttcaaac 18773758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 34000260 - 34000320
Alignment:
Q  32 ccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    |||||||||||  ||||||||||   ||||| ||||||||||||||||| |||||||||||    
T  34000260 ccgtgagcttaactcagttgataaggataatgcataatatatgtaaggttcggggttcaaa 34000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 19416503 - 19416578
Alignment:
Q  23 aagttgcccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||| || ||||||||||| ||||||| |||  | ||| ||||| ||||| |||||||||||||||||| ||||    
T  19416503 aagttgtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgg 19416578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 97
Target Start/End: Original strand, 29053039 - 29053106
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||||||||||| ||||||| | |  ||||| | ||||||||  ||||||||||||||||||||||    
T  29053039 ccccgtgagcttagctcagttggtttggataatgcttaatatatccaaggtccggggttcaaactccg 29053106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 10422052 - 10421994
Alignment:
Q  40 ttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||| ||||| | |||| ||| ||||||||||||||| || ||||||||||||||||    
T  10422052 ttagtttagttggtttaaaaaatgcataatatatgtaagatctggggttcaaactccgg 10421994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 25251508 - 25251569
Alignment:
Q  32 ccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||  ||||||| |||||| ||| |||||||||| ||||||  |||||||||||    
T  25251508 ccgtgagcttaactcagttggtataaacaatgcataatatatataaggtttggggttcaaac 25251569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 27462498 - 27462433
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||| ||| ||||||| |||  | ||| ||||||||||| |||||||||||||||||| ||||    
T  27462498 cgtgagcatagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgg 27462433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 93
Target Start/End: Complemental strand, 27833432 - 27833403
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||||||||||||||    
T  27833432 cataatatatgtaaggtccggggttcaaac 27833403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 35751429 - 35751368
Alignment:
Q  37 agcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||| ||| ||||||| |||||| |||||||||||||| |||  || ||||||||||||    
T  35751429 agcttagctcaattgatatgaataatgcataatatatgtaaagtctaggattcaaactccgg 35751368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 45151387 - 45151436
Alignment:
Q  44 ttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||  |||||| |||||||||||||||||  |||||||||||    
T  45151387 ttcagttgataggaataatgcataatatatgtaaggtttggggttcaaac 45151436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 5458133 - 5458073
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||||||  || ||| ||||||||||| |||||| ||| |||||||    
T  5458133 cgtgagcttagctcagttgataagaacaatgcataatatatgcaaggtctgggattcaaac 5458073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 31292834 - 31292766
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||||||  ||||||| ||| || ||| ||||||| ||| |||||| ||||||| ||||||||    
T  31292834 ccccgtgagcttaagtcagttggtatgaacaatgcataatacatgcaaggtctggggttcgaactccgg 31292766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 42753558 - 42753526
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaactcc 96  Q
    ||||||||||| |||||||||||||||||||||    
T  42753558 cataatatatgcaaggtccggggttcaaactcc 42753526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 47607943 - 47607907
Alignment:
Q  62 tacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  47607943 tacataatatatgcaaggtccagggttcaaactccgg 47607907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 24195249 - 24195312
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||| ||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  24195249 gtgaacttagctcagttgatatgaacaatacataatatatgcaaggtccggggttcaaactccg 24195312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 29293176 - 29293241
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||  |||||| ||||| | |||| |||||||||||||||||||| |||||||||||||    
T  29293176 cgtgagcttaactcagttaatatagacaatatataatatatgtaaggtccggagttcaaactccgg 29293241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 574384 - 574444
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaact 94  Q
    |||||||||| |||||||||||| | ||| ||||||||||||||||||||| |||| ||||    
T  574384 gtgagcttagctcagttgatatagacaatgcataatatatgtaaggtccggagttcgaact 574444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 27718956 - 27718892
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| |||||||||||  | ||| ||||||||||| ||||||||| ||||||||||||    
T  27718956 cgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcaaactccg 27718892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 28439958 - 28440018
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| ||| ||||||||||| | ||||| |||||||||||||||||| |||||||||||    
T  28439958 cgtgagtttaattcagttgataaagataatgcataatatatgtaaggtctggggttcaaac 28440018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 39139060 - 39138996
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| ||||||| | | |||||| ||||| ||||||||||| ||||||||||||||||    
T  39139060 cgtgagcttagctcagttggttttaataatgcataaaatatgtaaggttcggggttcaaactccg 39138996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 40482338 - 40482402
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||||||| || ||||| |||| |||||| ||||| |||| ||||||||||||||||||||||    
T  40482338 cgtgagcttaatttagttggtatagataatatataatgtatgcaaggtccggggttcaaactccg 40482402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 41625191 - 41625241
Alignment:
Q  31 cccgtgagcttagttcagttgatataaataatacataatatatgtaaggtc 81  Q
    ||||||||||||| ||||||| ||| |||||| ||||||||||||||||||    
T  41625191 cccgtgagcttagctcagttggtatgaataatgcataatatatgtaaggtc 41625241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 3650519 - 3650584
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||  ||||||| || ||| ||| ||||||||||||||||| |||||||||||| ||||    
T  3650519 cgtgagcttaactcagttggtagaaaaaatgcataatatatgtaaggttcggggttcaaaccccgg 3650584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 6038337 - 6038272
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||| ||||| |||||||||||  | ||| |||||||||||||||||| || |||||||||||||    
T  6038337 cgtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactccgg 6038272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 39433409 - 39433474
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| ||||||||||| || ||||||||| ||||| |||||| ||||||| ||| ||||    
T  39433409 cgtgagcttagctcagttgatatgaacaatacataaaatatgcaaggtctggggttcgaacgccgg 39433474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 6439011 - 6439059
Alignment:
Q  49 ttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||| | |||||||||||||||||||||||| ||||||| |||||||    
T  6439011 ttgataaagataatacataatatatgtaaggtctggggttcgaactccg 6439059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 16823247 - 16823183
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||  ||||||| |||| |  ||||||||||||||||||||||| |||||||| ||||    
T  16823247 cgtgagcttaactcagttggtatagactatacataatatatgtaaggtccgcggttcaaaatccg 16823183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 18422511 - 18422455
Alignment:
Q  37 agcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| ||||||||||| ||| ||| ||||||||||||||||| |||| |||||||    
T  18422511 agcttaattcagttgatagaaacaatgcataatatatgtaaggttcgggattcaaac 18422455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 26914133 - 26914077
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||||||||||| |||| |||||  |||| |||||||||||| |||||||    
T  26914133 cgtgagcttagttcagttgctatagataatgtataaaatatgtaaggtctggggttc 26914077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 32115468 - 32115408
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| ||||||||||| ||||  | ||| ||||||||||||||||| ||||||||||||    
T  32115468 cgtgagtttagttcagttaatatggacaatgcataatatatgtaaggttcggggttcaaac 32115408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 40795377 - 40795441
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||  ||||||| ||| || ||||||||||||||| |||||||||||||| || |||||    
T  40795377 gtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttctaattccgg 40795441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 19260627 - 19260576
Alignment:
Q  47 agttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||  | ||| |||||||||||||||||||||||||||||| ||||    
T  19260627 agttgatatgtacaatgcataatatatgtaaggtccggggttcaaaccccgg 19260576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 28580943 - 28581002
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    ||||||||| | ||||||| ||| |||||| ||||| ||||||||||| |||||||||||    
T  28580943 cgtgagcttggctcagttggtatgaataatgcataaaatatgtaaggttcggggttcaaa 28581002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 10320492 - 10320542
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggt 80  Q
    ||||||||| |||| ||||||||||  |||||| |||||||||||||||||    
T  10320492 ccccgtgagtttagctcagttgataagaataatgcataatatatgtaaggt 10320542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 5208228 - 5208195
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||||| ||||||||||||    
T  5208228 aatacataatatatgtaaggtacggggttcaaac 5208195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 12800935 - 12800902
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||| ||||||||||||||||||    
T  12800935 aatacataatatatgcaaggtccggggttcaaac 12800902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 24202156 - 24202212
Alignment:
Q  39 cttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactcc 96  Q
    |||| |||||||| |||||| |||||||||||||| |||||| | |||||||||||||    
T  24202156 cttaattcagttggtataaacaatacataatatatataaggttc-gggttcaaactcc 24202212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 29716762 - 29716697
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||  ||||||| ||  || ||| ||||||||||| |||||||||| ||||||||||||    
T  29716762 cgtgagcttaactcagttggtaggaacaattcataatatatgcaaggtccgggattcaaactccgg 29716697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 40316855 - 40316916
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaact 94  Q
    ||||||||||  ||||||||||| |||||| |||||||||||||| || |||  ||||||||    
T  40316855 cgtgagcttatctcagttgatatgaataatgcataatatatgtaaagttcggatttcaaact 40316916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 10656439 - 10656479
Alignment:
Q  58 ataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||||||||| |||||| || |||||||||||||    
T  10656439 ataatacataatatatgcaaggtctggagttcaaactccgg 10656479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 10871956 - 10871896
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||| ||||| |||  | ||| |||||| |||| ||||||||||||||||||    
T  10871956 cgtgagcttagtttagttggtatggacaatgcataatgtatgcaaggtccggggttcaaac 10871896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 19163598 - 19163538
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| |||  | ||| |||||| |||| ||||||||||||||||||    
T  19163598 cgtgagcttagctcagttggtatggacaatgcataatttatgcaaggtccggggttcaaac 19163538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 20469373 - 20469317
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||| ||||||| |||||| ||| ||||||||||| ||||| ||| ||||    
T  20469373 cgtgagcttagatcagttggtataaacaatgcataatatatgcaaggttcggagttc 20469317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 24687782 - 24687826
Alignment:
Q  37 agcttagttcagttgatataaataatacataatatatgtaaggtc 81  Q
    ||||||| ||| |||||||||| ||| ||||||||||||||||||    
T  24687782 agcttagctcaattgatataaacaatgcataatatatgtaaggtc 24687826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 32051593 - 32051529
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||| ||||||| | |  | ||| ||||||||||| |||||||||||||||||| ||||    
T  32051593 gtgagcttagctcagttggtttggacaatgcataatatatgcaaggtccggggttcaaaccccgg 32051529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 32223941 - 32223881
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||||||||||||| | | ||| ||||||||||| || ||| || ||||||||    
T  32223941 cgtgagcttagttcagttgatagagacaatgcataatatatgcaaagtctggagttcaaac 32223881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 33105390 - 33105450
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| |||| || | | || ||| ||||||||||| ||||||||||||||||||    
T  33105390 cgtgagcttagctcagctggtttgaacaatgcataatatatgcaaggtccggggttcaaac 33105450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 33359850 - 33359786
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||  |||||||||  | ||||| ||||| |||||||||||| ||| ||||||||||||    
T  33359850 gtgagcttatctcagttgattgagataatgcataaaatatgtaaggtctgggattcaaactccgg 33359786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 44293574 - 44293630
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||| ||||||| |||| | ||| ||||||||||||||| || |||||||    
T  44293574 cgtgagcttagctcagttggtatagacaatgcataatatatgtaagatctggggttc 44293630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 6e-16; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 39252319 - 39252256
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactcc 96  Q
    ||||||||||| |||||||||||  | ||||||||||||||||||||||| |||||||||||||    
T  39252319 cgtgagcttagctcagttgatatcgacaatacataatatatgtaaggtccagggttcaaactcc 39252256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 13401597 - 13401656
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||||| | | ||| ||||||||||||||||| ||||||||||||    
T  13401597 gtgagcttagttcagttgatagagacaatgcataatatatgtaaggttcggggttcaaac 13401656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 25532972 - 25533037
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||||||||||| |||  | ||| ||||||||||| |||||||||||||||||| ||||    
T  25532972 cgtgagcttagttcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgg 25533037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 18648419 - 18648461
Alignment:
Q  35 tgagcttagttcagttgatataaataatacataatatatgtaa 77  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  18648419 tgagcttagttcagttgataaaaataatacatattatatgtaa 18648461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 19620572 - 19620634
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    |||||||||||||| ||||||| ||   | ||||||||||||||| |||||||||||||||||    
T  19620572 ccccgtgagcttagctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaa 19620634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 26834519 - 26834581
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactc 95  Q
    ||||||||||| ||||||||||| ||  || ||||| |||||| |||||||||||||||||||    
T  26834519 cgtgagcttagctcagttgatatgaacgatgcataaaatatgtcaggtccggggttcaaactc 26834581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 34595869 - 34595931
Alignment:
Q  32 ccgtgagcttagttcagttga-tataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||||| ||   ||||| ||||||||||| ||||||||||||||||||    
T  34595869 ccgtgagcttagttcagttgactaaggataatgcataatatatgcaaggtccggggttcaaac 34595931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 563200 - 563265
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| ||||||||||   | || |||||||||||| ||||||||| |||||||||||||    
T  563200 cgtgagcttagctcagttgataaggacaaaacataatatatgcaaggtccggagttcaaactccgg 563265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 4859085 - 4859138
Alignment:
Q  36 gagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    |||||||  ||||||||||  ||||||||||||||||||||||||| |||||||    
T  4859085 gagcttaactcagttgataagaataatacataatatatgtaaggtctggggttc 4859138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 12213993 - 12214050
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaa 91  Q
    |||||||||| ||||||||||  || ||||||||||||||| |||||| |||||||||    
T  12213993 gtgagcttagctcagttgataggaacaatacataatatatgcaaggtctggggttcaa 12214050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 98
Target Start/End: Complemental strand, 49432031 - 49431990
Alignment:
Q  57 aataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  49432031 aataatgcataatatatgtaaggtccggggttcaaaccccgg 49431990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 3693858 - 3693798
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| |||||||||||| | ||  |||||||||||||||||| | |||||||||    
T  3693858 cgtgagcttagctcagttgatatagacaaagcataatatatgtaaggtctgaggttcaaac 3693798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 26755615 - 26755675
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| |||||||||||  | ||| ||| ||||||| ||||||||||||||||||    
T  26755615 cgtgagcttagctcagttgatatggacaatgcattatatatgcaaggtccggggttcaaac 26755675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 32950823 - 32950763
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||  ||||||| |||||| ||| ||||||||||| ||||||||| ||||||||    
T  32950823 cgtgagcttaactcagttggtataaacaatgcataatatatgcaaggtccggagttcaaac 32950763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 96
Target Start/End: Complemental strand, 39252181 - 39252145
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaactcc 96  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39252181 aatacataatatatgcaaggtccggggttcaaactcc 39252145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 41769877 - 41769813
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| ||||||| | |  ||||| ||||||||||  ||||||||||||||||||||||    
T  41769877 cgtgagcttagctcagttggtttggataatgcataatatatccaaggtccggggttcaaactccg 41769813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 32826763 - 32826720
Alignment:
Q  37 agcttagttcagttgatataaataatacataatatatgtaaggt 80  Q
    ||||||||||||||| || ||||||| |||||||||||||||||    
T  32826763 agcttagttcagttggtaaaaataatgcataatatatgtaaggt 32826720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 32870244 - 32870303
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||| ||| |||| || |||| ||| ||||||||||||||||||| |||||||||    
T  32870244 gtgagcttaattcggttggtagaaatgatatataatatatgtaaggtccgtggttcaaac 32870303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 41677655 - 41677596
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    |||||||||||||| ||||||| ||   | ||||||||||||||||||| ||||||||||    
T  41677655 ccccgtgagcttagctcagttggtaaggacaatacataatatatgtaagatccggggttc 41677596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 3528531 - 3528473
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaa 91  Q
    |||||| |||| |||||||||| ||| |||  |||||||||||||||||||| ||||||    
T  3528531 cgtgagtttagctcagttgatagaaacaatgtataatatatgtaaggtccggtgttcaa 3528473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 28213912 - 28213954
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgt 75  Q
    |||||||||| ||||||||||||| |||||| |||||||||||    
T  28213912 cgtgagcttaattcagttgatatacataatatataatatatgt 28213954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 33825840 - 33825878
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  33825840 aatacataatatatgtaaggtctggggtttaaactccgg 33825878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 33878912 - 33878950
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  33878912 aatacataatatatgtaaggtctggggtttaaactccgg 33878950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 8269403 - 8269370
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||| ||||||||||||||||||    
T  8269403 aatacataatatatgcaaggtccggggttcaaac 8269370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 15892796 - 15892857
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacat-aatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||| ||| || ||| ||| || |||||||||||||| |||||||||    
T  15892796 cgtgagcttagttcagttggtatgaacaatgcataaaaatatgtaaggtccgaggttcaaac 15892857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 16967256 - 16967191
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| | |||||||||  | ||| ||||||||||| ||||| || ||||||||||||||    
T  16967256 cgtgagcttagcttagttgatatggacaatgcataatatatgcaaggttcgaggttcaaactccgg 16967191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 21965953 - 21965888
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacat-aatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||| ||||||||||| |||||| ||| |||||||  |||||||||||||| ||| ||||    
T  21965953 gtgagcttagctcagttgatatgaataatgcataaatatatacaaggtccggggttcgaaccccgg 21965888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 23045190 - 23045251
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaact 94  Q
    ||||||||||  || ||| |||| || ||| ||||||||||||||||||||| |||||||||    
T  23045190 cgtgagcttaactccgttaatatgaacaatgcataatatatgtaaggtccggagttcaaact 23045251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 24571660 - 24571623
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||||||| |||||| |||||||||||||||    
T  24571660 aatacataatatatgcaaggtctggggttcaaactccg 24571623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 34485875 - 34485932
Alignment:
Q  32 ccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    |||||||||||| |||||||||    ||||| |||||||||||||||||| |||||||    
T  34485875 ccgtgagcttagctcagttgatggggataatgcataatatatgtaaggtctggggttc 34485932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 36371102 - 36371049
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccgggg 86  Q
    ||||||||||| ||||||| || | | ||| |||||||||||||||||||||||    
T  36371102 cgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccgggg 36371049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 41763217 - 41763152
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| ||||||| ||   ||||| ||||| ||||| |||||||||||||||||| ||||    
T  41763217 cgtgagcttagctcagttggtagggataatgcataaaatatgcaaggtccggggttcaaaccccgg 41763152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 50372420 - 50372363
Alignment:
Q  36 gagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||| |||||||||||||| ||| |||||||||| | ||||| | |||||||||    
T  50372420 gagcttagctcagttgatataaacaatgcataatatatatcaggtctgaggttcaaac 50372363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 1603684 - 1603732
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||| | |||| |||| ||||||||||||||| ||||||||    
T  1603684 tcagttgatatagacaatatataaaatatgtaaggtccggagttcaaac 1603732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 9413797 - 9413853
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    |||||| |||||||||||| ||  || ||| ||||||||||||||||| ||||||||    
T  9413797 cgtgagtttagttcagttggtaagaacaatgcataatatatgtaaggttcggggttc 9413853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 18166601 - 18166661
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||| |||||| ||||||| |||| | ||| ||||||||||| || |||||||||||||||    
T  18166601 cgtgggcttagctcagttggtatagacaatgcataatatatgcaaagtccggggttcaaac 18166661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 37383853 - 37383789
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||||||||||| | |  ||||| |||||||||| |||||| |||| ||||| |||||    
T  37383853 cgtgagcttagttcagttggtttggataatgcataatatatctaaggttcgggattcaagctccg 37383789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 43611423 - 43611483
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| |||| ||||||| |||  | |||||||||||||||||||||  |||||||||||    
T  43611423 cgtgagtttagctcagttggtatggacaatacataatatatgtaaggtatggggttcaaac 43611483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 44119534 - 44119474
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| ||| || ||||| ||| || ||||||||||||||||||| || |||||||||||    
T  44119534 cgtgagtttaatttagttggtatgaacaatacataatatatgtaagttctggggttcaaac 44119474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 45481489 - 45481557
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||||| |||| ||| ||   | ||| ||||||||||| |||||||||||||| ||||||||    
T  45481489 ccccgtgagcttaattcatttggtaaggacaatgcataatatatgcaaggtccggggttcgaactccgg 45481557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 46392232 - 46392296
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||||||||||||||||   |  ||||| ||||||||||  ||||||||||||||||| ||||    
T  46392232 cgtgagcttagttcagttggcttggataatgcataatatatccaaggtccggggttcaaattccg 46392296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 47070847 - 47070907
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| |||||||||||||||  || ||||||||||||||| ||||| ||| ||| ||||    
T  47070847 cgtgagtttagttcagttgataggaacaatacataatatatgcaaggttcggagtttaaac 47070907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 48681995 - 48681931
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| ||||||| ||| || ||| ||||||||||| ||||| ||| | ||||||||||    
T  48681995 cgtgagcttagctcagttggtatgaacaatgcataatatatgcaaggttcggagctcaaactccg 48681931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 39595997 - 39595935
Alignment:
Q  35 tgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||||| | |||||||||||||    
T  39595997 tgagcttagctcaattgatataaataatacataatatatgcaaggtctgaggttcaaactccg 39595935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 18903820 - 18903760
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| |||| |||||||||| ||||||| |||||||||||||||||| |||||||||||    
T  18903820 cgtgagtttagctcagttgataaaaataatgcataatatatgtaaggtctggggttcaaac 18903760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 5924648 - 5924708
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| |||  | ||||||||||||||| ||||||||||||||||||    
T  5924648 cgtgagcttagctcagttgctatggacaatacataatatatggaaggtccggggttcaaac 5924708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 14202541 - 14202481
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||  ||||||||| |  ||||| ||||||||||||||||||||||||||||||    
T  14202541 cgtgagcttaactcagttgatttggataatgcataatatatgtaaggtccggggttcaaac 14202481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 50668339 - 50668399
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||| |||| |||||||| ||| || ||||||||||||||||||||| ||||||||||||    
T  50668339 cgtgaacttaattcagttggtatgaacaatacataatatatgtaaggttcggggttcaaac 50668399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 54500568 - 54500628
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| || | | ||| ||||||||||||||||||||||||||||||    
T  54500568 cgtgagcttagctcagttggtagagacaatgcataatatatgtaaggtccggggttcaaac 54500628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 160708 - 160767
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    ||||||||||||||||| | ||| || ||| |||||||||||||||||| ||||||||||    
T  160708 cgtgagcttagttcagtaggtattaacaatgcataatatatgtaaggtctggggttcaaa 160767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 6087747 - 6087806
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||| ||||||| |||| ||||| ||||||||||| |||||| |||||||||||    
T  6087747 gtgagcttagctcagttggtatagataatgcataatatatgcaaggtctggggttcaaac 6087806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 19479538 - 19479479
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||| |||||| |||| || ||| ||||||||||| ||||||||||||||||||    
T  19479538 gtgagcttagctcagttaatatgaacaatgcataatatatgcaaggtccggggttcaaac 19479479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 50380898 - 50380839
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    |||||||||| |||||||| ||| || ||| ||||||||||||||||||||| |||||||    
T  50380898 cgtgagcttaattcagttggtatgaacaatgcataatatatgtaaggtccggagttcaaa 50380839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 8737722 - 8737787
Alignment:
Q  27 tgcccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    ||||| ||||||||| | ||| |||||||||| ||||||||||||||||||| | | |||||||||    
T  8737722 tgccctcgtgagcttcgctcaattgatataaacaatacataatatatgtaagattcagggttcaaa 8737787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 49042043 - 49041978
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||||   |||||||||| | ||| ||||||||||| |||||||||||||||||| ||||    
T  49042043 cgtgagcttagcctagttgatatagacaatgcataatatatgcaaggtccggggttcaaaccccgg 49041978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 54857677 - 54857612
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| || |||| |||||| ||| ||||| ||||| |||||||||||||||||| ||||    
T  54857677 cgtgagcttagctcggttggtataaacaatgcataaaatatgcaaggtccggggttcaaaccccgg 54857612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 3936627 - 3936691
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||| ||||||| ||| || ||| ||||||||||| |||||||||||||| ||| ||||    
T  3936627 gtgagcttagctcagttggtatgaacaatgcataatatatgcaaggtccggggttcgaaccccgg 3936691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 20383488 - 20383547
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||| ||||||| |||  | ||| ||||||||||| ||||||||||||||||||    
T  20383488 gtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 20383547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 91
Target Start/End: Original strand, 31542617 - 31542648
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaa 91  Q
    ||||||||||||||||||||||||||||||||    
T  31542617 aatacataatatatgtaaggtccggggttcaa 31542648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 39489606 - 39489665
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||| |||||||||||  || |||||||| |||||| ||||| ||||||||||||    
T  39489606 gtgagcttaattcagttgataggaacaatacatagtatatgcaaggttcggggttcaaac 39489665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 6628353 - 6628303
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccg 83  Q
    |||||| |||||||||||| |||| ||||||||||||||||| || |||||    
T  6628353 cgtgagtttagttcagttggtatatataatacataatatatgcaatgtccg 6628303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 7371611 - 7371545
Alignment:
Q  32 ccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||||  ||||||||||   | ||||||||||||||| |||||||||||||| ||| ||||    
T  7371611 ccgtgagcttaactcagttgataaggacaatacataatatatgcaaggtccggggttcgaaccccgg 7371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 11949823 - 11949765
Alignment:
Q  35 tgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||| ||||||| |||  | ||| ||||||||||| ||||||||||||||||||    
T  11949823 tgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 11949765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 25783480 - 25783446
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| |||||||||||||||||||||||    
T  25783480 cataatatatgcaaggtccggggttcaaactccgg 25783446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 94
Target Start/End: Complemental strand, 49952600 - 49952570
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaact 94  Q
    |||||||||||||||||||||||||||||||    
T  49952600 cataatatatgtaaggtccggggttcaaact 49952570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 32006499 - 32006564
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||| |||| ||||||| ||   ||||| |||||||||||||| || |||||||||||||||||    
T  32006499 cgtgagtttagctcagttggtagggataatgcataatatatgtaaagttcggggttcaaactccgg 32006564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 35021538 - 35021473
Alignment:
Q  24 agttgcccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||| || ||||||||||| |||||||||||  | ||||||||| ||||| ||||| ||||||||    
T  35021538 agttgtcctcgtgagcttagctcagttgatatggacaatacataaaatatgcaaggttcggggttc 35021473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 35287569 - 35287504
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| ||||||| ||| || ||| ||||| ||||| |||||||||||||| ||| ||||    
T  35287569 cgtgagcttagctcagttggtatgaacaatgcataaaatatgcaaggtccggggttccaaccccgg 35287504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 43722795 - 43722824
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||||||||||||||    
T  43722795 cataatatatgtaaggtccggggttcaaac 43722824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 47814309 - 47814248
Alignment:
Q  37 agcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||| ||||||| |||  | || |||||||||||| |||||||||||||||||| ||||    
T  47814309 agcttagctcagttggtatggacaacacataatatatgcaaggtccggggttcaaaccccgg 47814248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 53142607 - 53142660
Alignment:
Q  35 tgagcttagttcagttgatataaataatacataatatatgtaaggtccggggtt 88  Q
    ||||||||||||||||| |||| ||||| ||||||||||| || || |||||||    
T  53142607 tgagcttagttcagttgctatagataatgcataatatatgcaacgttcggggtt 53142660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 93
Target Start/End: Original strand, 897456 - 897484
Alignment:
Q  65 ataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||||||||||||||||||||    
T  897456 ataatatatgtaaggtccggggttcaaac 897484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 2587762 - 2587710
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggg 85  Q
    ||||||||||| ||| ||| |||  ||||| ||||||||||||||||||||||    
T  2587762 cgtgagcttagctcaattggtatggataatgcataatatatgtaaggtccggg 2587710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 6459986 - 6459930
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||  |||||||||||  | ||| ||||||||||||||||||||| ||||    
T  6459986 cgtgagcttaactcagttgatatggacaatgcataatatatgtaaggtccggagttc 6459930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 7230279 - 7230339
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| ||   | ||| ||||||||||| ||||||||||||||||||    
T  7230279 cgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaac 7230339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 9946426 - 9946486
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| |||  | ||| ||||| ||||| ||||||||||||||||||    
T  9946426 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaac 9946486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 10564526 - 10564462
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||| |||| ||||||| |||  | |||||||||||||||||||||| | ||||||||| ||||    
T  10564526 gtgagtttagctcagttggtatggacaatacataatatatgtaaggtctgaggttcaaaccccgg 10564462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 16686234 - 16686174
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||  |||||||||||  | ||| ||||||||| ||||||||||| ||||||||    
T  16686234 cgtgagcttaaatcagttgatatggacaatgcataatataggtaaggtccggagttcaaac 16686174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 96
Target Start/End: Complemental strand, 17423208 - 17423176
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaactcc 96  Q
    ||||||||||| |||||||||||||||||||||    
T  17423208 cataatatatgcaaggtccggggttcaaactcc 17423176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 20799456 - 20799396
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| ||   | ||| ||||||||||| ||||||||||||||||||    
T  20799456 cgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaac 20799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 21317400 - 21317340
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| || | | ||| ||||||||||| |||||| |||||||||||    
T  21317400 cgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtcaggggttcaaac 21317340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 22411765 - 22411825
Alignment:
Q  35 tgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactc 95  Q
    ||||| ||| ||||||| |||  | ||| ||||||||||||||||| ||||||||||||||    
T  22411765 tgagcatagctcagttggtatggacaatgcataatatatgtaaggttcggggttcaaactc 22411825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 24665053 - 24664997
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||| ||||||| |||  | ||| ||||||||||| ||||||||||||||    
T  24665053 cgtgagcttagctcagttggtatggagaatgcataatatatgcaaggtccggggttc 24664997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 36035833 - 36035897
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| ||||||  | |  ||||| ||||||||||  ||||||||||||||||||||||    
T  36035833 cgtgagcttagctcagttagtttggataatgcataatatatccaaggtccggggttcaaactccg 36035897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 31214634 - 31214697
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||| ||||||| ||||| || ||||||| |||||||||||||||||||||| |||||||||||    
T  31214634 gtgaacttagttaagttggtagaaataatgcataatatatgtaaggtccgggattcaaactccg 31214697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 47099100 - 47099038
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    |||||||||||||| ||||||||||  |||||| ||||||||||| ||||| |||||||||||    
T  47099100 ccccgtgagcttagctcagttgataagaataatgcataatatatgcaaggttcggggttcaaa 47099038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 17755123 - 17755184
Alignment:
Q  36 gagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||||| ||||||||||  || ||||||||||||||||||||| ||||||||||| ||||    
T  17755123 gagcttagctcagttgataggaacaatacataatatatgtaaggttcggggttcaaattccg 17755184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 19056443 - 19056504
Alignment:
Q  36 gagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||||| ||||||||||  || ||||||||||||||||||||| ||||||||||| ||||    
T  19056443 gagcttagctcagttgataggaacaatacataatatatgtaaggttcggggttcaaattccg 19056504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 2563925 - 2563993
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||||||  |||||||||| |||||||  |||||||||||||||| || ||||||||| ||||    
T  2563925 ccccgtgagcttaactcagttgataaaaataatgaataatatatgtaaggttcgaggttcaaaccccgg 2563993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 4332729 - 4332665
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| ||||||| | | |||||| ||||||||||  ||||||||||||||||||||||    
T  4332729 cgtgagcttagctcagttggtttgaataatgcataatatatccaaggtccggggttcaaactccg 4332665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 43499877 - 43499937
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||| |||| |||||||||||| |||||| ||||| |||||||||||||| |||||||||    
T  43499877 cgtgaacttaattcagttgatatcaataatgcataaaatatgtaaggtccgtggttcaaac 43499937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 47040952 - 47040892
Alignment:
Q  37 agcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||||||||||| || ||| |||||| |||||||||| |||||||||| |||||    
T  47040952 agcttagttcagttgatatgaacaatgcataatgtatgtaaggttcggggttcaagctccg 47040892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 31463492 - 31463543
Alignment:
Q  42 agttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||| ||||||| |||||||||||||||||| | |||||||||    
T  31463492 agttcagttgatagaaataatgcataatatatgtaaggtctgaggttcaaac 31463543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 33634511 - 33634557
Alignment:
Q  47 agttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||    
T  33634511 agttggtataaataatatataatatatgtaaggttcggggttcaaac 33634557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 3612243 - 3612186
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaa 91  Q
    |||||||||| |||||||||||  ||||| |||||||||| |||| ||||||||||||    
T  3612243 gtgagcttagctcagttgatatggataatgcataatatatataagctccggggttcaa 3612186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 21160063 - 21160111
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||  ||||| |||||||||||||||||| |||||||||||    
T  21160063 tcagttgatatggataatgcataatatatgtaaggtcgggggttcaaac 21160111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 39408325 - 39408270
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    |||||||||||||| ||||| ||||||||  |||||||||| |||||| |||||||    
T  39408325 gtgagcttagttcaattgatttaaataatgtataatatatgcaaggtctggggttc 39408270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 48315086 - 48315027
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    ||||||||||| ||||||| ||   ||||| ||||||||||| |||||||||||||||||    
T  48315086 cgtgagcttagctcagttggtaaggataatgcataatatatgcaaggtccggggttcaaa 48315027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 10843843 - 10843793
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccg 83  Q
    ||||||||||  ||||||| ||| |||||||||||||||||| ||||||||    
T  10843843 cgtgagcttaactcagttggtatgaataatacataatatatgcaaggtccg 10843793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 46903938 - 46903972
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||||||||||| |||||||||||||||    
T  46903938 cataatatatgtaaggtccagggttcaaactccgg 46903972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 2186462 - 2186429
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||||||||||||| |||||||||||    
T  2186462 aatacataatatatgtaaggtctggggttcaaac 2186429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 93
Target Start/End: Complemental strand, 7464522 - 7464493
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||||||||||||||    
T  7464522 cataatatatgtaaggtccggggttcaaac 7464493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 16793036 - 16792971
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||||  |||||| |||| | ||| ||||||||||| ||||||| |||||||||| ||||    
T  16793036 cgtgagcttagcacagttggtatagacaatgcataatatatgcaaggtccagggttcaaaccccgg 16792971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 25340986 - 25340921
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| ||||||| |||  | ||| ||||| ||||| |||||||||||||||||| ||||    
T  25340986 cgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgg 25340921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 36354580 - 36354535
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaagg 79  Q
    |||||||||| ||||||||||| || |||| |||||||||||||||    
T  36354580 gtgagcttagctcagttgatatgaaaaatatataatatatgtaagg 36354535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 7859542 - 7859498
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||| |||| ||||| ||||||||||||||||| ||||||||    
T  7859542 tcagttggtatagataatgcataatatatgtaaggttcggggttc 7859498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 7938723 - 7938779
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||||||||||| ||| || ||| ||||||||||  |||||| |||||||    
T  7938723 cgtgagcttagttcagttggtatgaacaatgcataatatatacaaggtctggggttc 7938779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 16663286 - 16663238
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||| |||  ||||| ||||||||||| ||||||||||||||||||    
T  16663286 tcagttggtatggataatgcataatatatgcaaggtccggggttcaaac 16663238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 20413814 - 20413774
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatat 73  Q
    ||||||||||| |||||||||||  ||||||||||||||||    
T  20413814 cgtgagcttagctcagttgatatggataatacataatatat 20413774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 21628950 - 21628886
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| ||||||| | |  ||||| ||||||||||  || |||||||||||||||||||    
T  21628950 cgtgagcttagctcagttggtttggataatgcataatatatccaacgtccggggttcaaactccg 21628886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 27185476 - 27185536
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| ||   | ||||||||||||||| |||||| |||||||||||    
T  27185476 cgtgagcttagctcagttggtagggacaatacataatatatgcaaggtctggggttcaaac 27185536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 38131020 - 38130956
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||  ||||||| |||  | ||| ||||||||||| |||||||||||||||||| ||||    
T  38131020 gtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgg 38130956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 38330814 - 38330750
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| ||| ||| |||||| |||| |||||||||| ||||| |||| |||||| ||||    
T  38330814 cgtgagcttagctcaattggtataaacaatatataatatatgcaaggttcgggattcaaaatccg 38330750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 39498365 - 39498421
Alignment:
Q  41 tagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||||||||  ||| ||||||||||| |||||||||||  || ||||||||||||    
T  39498365 tagttcagttggcatagataatacataaaatatgtaaggtttggagttcaaactccg 39498421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 48376834 - 48376890
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||| ||||||| || | ||||| |||||||||||||||||  |||||||    
T  48376834 cgtgagcttagctcagttggtaaagataatgcataatatatgtaaggtttggggttc 48376890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 50459771 - 50459727
Alignment:
Q  53 tataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||| ||||||||||| |||||||||||||  |||||||||||||    
T  50459771 tatagataatacataaaatatgtaaggtccaaggttcaaactccg 50459727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 53633679 - 53633623
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||  ||||||| ||   ||||| ||||||||||||||||||||||||||    
T  53633679 cgtgagcttaactcagttggtaaggataatgcataatatatgtaaggtccggggttc 53633623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 17394679 - 17394728
Alignment:
Q  39 cttagttcagttgatataaataatacataatatatgtaaggtccggggtt 88  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||    
T  17394679 cttagttcagttgataggaataatacataatatatgtaaggttcggggtt 17394728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 346186 - 346126
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| | | |||||| ||||||||||||||||||| ||||||||||    
T  346186 cgtgagcttagctcagttggtttgaataatgcataatatatgtaaggtccagggttcaaac 346126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 8775269 - 8775314
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaag 78  Q
    ||||||||||| ||||||||||  ||||||||||||||||||||||    
T  8775269 cgtgagcttaggtcagttgataggaataatacataatatatgtaag 8775314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 33063985 - 33064050
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| |||||||||||  | ||| ||||||||||| ||||||||| |||| ||||||||    
T  33063985 cgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccggagttcgaactccgg 33064050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 25186304 - 25186244
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| |||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||    
T  25186304 cgtgagtttagctcagttgatatggacaatgcataatatatgcaaggtccggggttcaaac 25186244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 29599938 - 29600002
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| ||||||| | |  ||||| ||||||||||  ||||||||||||||||||||||    
T  29599938 cgtgagcttagctcagttggtttggataatgcataatatatccaaggtccggggttcaaactccg 29600002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 31543011 - 31543071
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| |||| || |||  ||||| ||||||||||| ||||||||||||||||||    
T  31543011 cgtgagcttagctcagatggtatggataatgcataatatatgcaaggtccggggttcaaac 31543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 34345405 - 34345369
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtc 81  Q
    |||||||||||| ||||||||||||||||||||||||    
T  34345405 tcagttgatatagataatacataatatatgtaaggtc 34345369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 13000685 - 13000744
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||| ||||||| || | ||||| |||||||||||||||||||| |||| ||||    
T  13000685 gtgagcttagctcagttggtaaagataatgcataatatatgtaaggtccgaggtttaaac 13000744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 22571927 - 22571868
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    ||||| ||||| |||||||||||| | ||| ||||||||||| || ||||||||||||||    
T  22571927 cgtgaacttagctcagttgatatagacaatgcataatatatgcaatgtccggggttcaaa 22571868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 40853879 - 40853820
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||| ||||||||||| ||  || ||||||||||| ||||||||||| ||||||    
T  40853879 gtgagcttagctcagttgatatgaaatatgcataatatatgcaaggtccggggatcaaac 40853820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 98
Target Start/End: Complemental strand, 4927480 - 4927446
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||||||||||||||||||||||| ||||    
T  4927480 cataatatatgtaaggtccggggttcaaaccccgg 4927446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 41682448 - 41682402
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggt 80  Q
    |||||||||  ||||||| |||||||||| |||||||||||||||||    
T  41682448 gtgagcttaactcagttggtataaataatgcataatatatgtaaggt 41682402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 17281008 - 17280955
Alignment:
Q  35 tgagcttagttcagttgatataaataatacataatatatgtaaggtccggggtt 88  Q
    ||||||||| ||||||||||| ||||||  |||||||||| ||||| |||||||    
T  17281008 tgagcttagctcagttgatatgaataatgtataatatatgcaaggtgcggggtt 17280955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 25625746 - 25625775
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||||||||||||||    
T  25625746 cataatatatgtaaggtccggggttcaaac 25625775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 26999109 - 26999174
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||| ||||||||||||| || | | ||| ||||||||||| |||||| | ||||||||||||||    
T  26999109 cgtgaacttagttcagttggtagagacaatgcataatatatgcaaggtctgcggttcaaactccgg 26999174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 97
Target Start/End: Complemental strand, 33890207 - 33890174
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||||||||||||| ||||||||||||    
T  33890207 cataatatatgtaaggtccggcgttcaaactccg 33890174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 41853376 - 41853429
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||| ||||||||| ||| ||||||||||||||||||||| |||| ||| ||||    
T  41853376 tcagctgatataaacaatgcataatatatgtaaggtccggcgttcgaaccccgg 41853429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 44810731 - 44810764
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||| ||||||||||||||||||    
T  44810731 aatacataatatatgcaaggtccggggttcaaac 44810764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 10195724 - 10195664
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| |||||||||||  ||||| ||||||||||| ||| || || ||||||||    
T  10195724 cgtgagcttagctcagttgatatggataatgcataatatatgcaagatctggagttcaaac 10195664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 12893309 - 12893257
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtcc 82  Q
    |||||||||||||| ||||||||||  || |||  ||||||||||||||||||    
T  12893309 ccccgtgagcttagctcagttgataagaacaatgtataatatatgtaaggtcc 12893257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 19159952 - 19160004
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| || ||| ||||||||||| ||||| ||| ||||||||||||    
T  19159952 tcagttgatatgaacaatgcataatatatgcaaggttcggagttcaaactccg 19160004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 19967417 - 19967477
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||||||| || ||| |||||||| || ||||| ||| ||||||||    
T  19967417 cgtgagcttagctcagttgatatgaacaatgcataatatgtgcaaggttcggagttcaaac 19967477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 20565137 - 20565077
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| ||   | ||| ||||||||||| ||||||||||||||||||    
T  20565137 cgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaac 20565077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 28202296 - 28202356
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||||||   | ||| ||||||||||||||||||||  ||||||||    
T  28202296 cgtgagcttagctcagttgatagggacaatgcataatatatgtaaggtccgaagttcaaac 28202356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 29896356 - 29896296
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| ||| ||||||||||| ||| ||| ||||||||||| |||||  |||||||||||    
T  29896356 cgtgagtttaattcagttgatagaaacaatgcataatatatgcaaggtttggggttcaaac 29896296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 32458313 - 32458365
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||  || ||| ||||||||||| ||||||| ||||||||||||||    
T  32458313 tcagttgataagaacaatgcataatatatgcaaggtccagggttcaaactccg 32458365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 33117466 - 33117406
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataata-tatgtaaggtccggggttcaaac 93  Q
    |||||||||| ||||||  ||| |||||| ||||||| ||| |||||||||||||||||||    
T  33117466 gtgagcttagctcagttagtatgaataatgcataataatatataaggtccggggttcaaac 33117406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000009; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 9111046 - 9111102
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||||||||||| ||| || ||| ||||||||||| ||||||||||||||    
T  9111046 cgtgagcttagttcagttggtatgaacaatgcataatatatgcaaggtccggggttc 9111102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 24248162 - 24248222
Alignment:
Q  31 cccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaa 91  Q
    |||||||||||||  |||||| ||   ||||||||||||||||||||||||||||||||||    
T  24248162 cccgtgagcttagcacagttggtaaggataatacataatatatgtaaggtccggggttcaa 24248222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 23635775 - 23635713
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactcc 96  Q
    |||||||||  |||||||||||| | ||| ||||||||||||||||| ||| |||||||||||    
T  23635775 gtgagcttatctcagttgatatatacaatgcataatatatgtaaggttcggagttcaaactcc 23635713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 4450260 - 4450317
Alignment:
Q  32 ccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    |||||||||||| |||||||||| | | ||| ||||||||||| ||||||||||||||    
T  4450260 ccgtgagcttagctcagttgataaagacaatgcataatatatgcaaggtccggggttc 4450317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 5040895 - 5040830
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| ||||||| || | | || |||||||||||| ||||||||| |||||||||||||    
T  5040895 cgtgagcttagctcagttggtaaagacaaaacataatatatgcaaggtccggtgttcaaactccgg 5040830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 10018423 - 10018463
Alignment:
Q  58 ataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  10018423 ataatgcataatatatgtaaggttcggggttcaaactccgg 10018463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 13496115 - 13496175
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||  ||||||||||| || ||| ||||||||||| ||||||||| ||||||||    
T  13496115 cgtgagcttaactcagttgatatgaacaatgcataatatatgcaaggtccggagttcaaac 13496175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 14297018 - 14296954
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||| | ||||| |||  | ||||||||| |||||||||||||||||||||||| ||||    
T  14297018 gtgagcttagctgagttggtatggacaatacataaaatatgtaaggtccggggttcaaaccccgg 14296954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 26556426 - 26556382
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaa 77  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||||    
T  26556426 cgtgagcttagttcagttgatatagataatgcataatacatgtaa 26556382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 12318766 - 12318825
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    ||||||||||||||||||| ||| || |||||||||| |||| ||||||  |||||||||    
T  12318766 cgtgagcttagttcagttgctatgaacaatacataatgtatgcaaggtctagggttcaaa 12318825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 24605692 - 24605751
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||||||||||||||||||  | |||| |||||||||| | ||||||| ||||    
T  24605692 ccccgtgagcttagttcagttgatatggacaatatataatatatgcagggtccggagttc 24605751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 24623378 - 24623319
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||| |||| |||||||||||  | ||| ||||||||||||||||| ||||||||||||    
T  24623378 gtgagtttagctcagttgatatggacaatgcataatatatgtaaggttcggggttcaaac 24623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 30370212 - 30370165
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggt 80  Q
    ||||||||||||||||||| || | ||||| |||||||||||||||||    
T  30370212 cgtgagcttagttcagttggtaaagataatgcataatatatgtaaggt 30370165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 3487927 - 3487977
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggt 80  Q
    |||||||| ||||||||||||||||  |||||| ||||||||||| |||||    
T  3487927 ccccgtgaacttagttcagttgataagaataatgcataatatatgcaaggt 3487977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 12329272 - 12329322
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggt 80  Q
    |||||||||||||| ||||||| ||| || ||||||||| |||||||||||    
T  12329272 ccccgtgagcttagctcagttgttatgaacaatacataaaatatgtaaggt 12329322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 12904379 - 12904317
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactc 95  Q
    ||||||||||  ||||||||||| || ||| ||||||||||| ||||| ||| ||||||||||    
T  12904379 cgtgagcttacctcagttgatatgaacaatgcataatatatgcaaggttcggagttcaaactc 12904317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 20720843 - 20720789
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggt 87  Q
    ||||||||||| ||||||| |||  | ||| ||||||||||||||||||||||||    
T  20720843 cgtgagcttagctcagttgttatggacaatgcataatatatgtaaggtccggggt 20720789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 4826289 - 4826354
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||| ||||||||| ||| || | | ||| ||||||||||||||||| || ||||||||||||||    
T  4826289 cgtgaacttagttcaattggtagagacaatgcataatatatgtaaggttcgaggttcaaactccgg 4826354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 8138513 - 8138460
Alignment:
Q  40 ttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||| ||||||||||  || ||| |||||||||||||||||| |||||||||||    
T  8138513 ttagctcagttgataagaacaatgcataatatatgtaaggtctggggttcaaac 8138460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 9311992 - 9311947
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaag 78  Q
    ||||||||||  ||||||| ||| ||||||||||||||||||||||    
T  9311992 cgtgagcttaactcagttggtatgaataatacataatatatgtaag 9311947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 9665336 - 9665373
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  9665336 aatatataatatatgtaaggtccggggttcgaactccg 9665373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 12459779 - 12459742
Alignment:
Q  57 aataatacataatatatgtaaggtccggggttcaaact 94  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  12459779 aataatgcataatatatgtaaggttcggggttcaaact 12459742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 93
Target Start/End: Original strand, 16390459 - 16390488
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||||||||||||||    
T  16390459 cataatatatgtaaggtccggggttcaaac 16390488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 32053787 - 32053852
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| ||||||| |||  | ||| ||||||||||| ||||| || ||||||||||||||    
T  32053787 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggttcgtggttcaaactccgg 32053852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 34701146 - 34701211
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||| ||||||||||||| ||  || ||| ||||||||||| |||||| | ||||||||||||||    
T  34701146 cgtgaacttagttcagttggtaggaacaatgcataatatatgcaaggtctgaggttcaaactccgg 34701211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 655810 - 655746
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||| ||||||| |||  | ||| ||||||||||| |||||||||||||| ||| ||||    
T  655810 gtgagcttagctcagttggtatcgacaatgcataatatatgcaaggtccggggttcgaaccccgg 655746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 7081716 - 7081668
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtc 81  Q
    ||||||||||| |||||||||| | | ||||||||||||||| ||||||    
T  7081716 cgtgagcttagctcagttgataaagacaatacataatatatgcaaggtc 7081668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 7730663 - 7730723
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||| ||||||||||||| |||||| ||| |||||| |||||||| | |||| |||||||    
T  7730663 cgtgaacttagttcagttggtataaacaatgcataatgtatgtaagtttcgggattcaaac 7730723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 8809305 - 8809365
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||| |||||||| |||||| ||| ||| ||||||||||| ||| |||| |||||||||    
T  8809305 cgtgagtttagttcaattgataaaaacaatgcataatatatgcaagatccgaggttcaaac 8809365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 9392730 - 9392670
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| ||| || ||| ||||||||||| |||||||| |||| ||||    
T  9392730 cgtgagcttagctcagttgttatgaaaaatgcataatatatgcaaggtccgaggtttaaac 9392670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 17420768 - 17420732
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtc 81  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  17420768 tcagttggtataaacaatacataatatatgtaaggtc 17420732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 20744137 - 20744197
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| |||  | ||| ||||||||||| |||||| |||||||||||    
T  20744137 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaac 20744197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 93
Target Start/End: Complemental strand, 22792970 - 22792942
Alignment:
Q  65 ataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||||||||||||||||||||    
T  22792970 ataatatatgtaaggtccggggttcaaac 22792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 25934808 - 25934868
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||||| | || |||  |||||||||||||| | ||||||||||||    
T  25934808 cgtgagcttagatcagttgatttgaacaatgaataatatatgtaagattcggggttcaaac 25934868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 28046241 - 28046193
Alignment:
Q  32 ccgtgagcttagttcagttgatataaataatacataatatatgtaaggt 80  Q
    ||||||||||||||||||||||| | | ||| ||||||||||| |||||    
T  28046241 ccgtgagcttagttcagttgataaagacaatgcataatatatgcaaggt 28046193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 28231486 - 28231422
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||| | ||||||||||   | ||| ||||||||||| ||||||||||||||| |||||||    
T  28231486 gtgagcttggctcagttgatagggacaatgcataatatatgcaaggtccggggttcacactccgg 28231422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 33824880 - 33824940
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||| ||||| ||||||||||   | ||| ||||||||||| ||||||||||||||||||    
T  33824880 cgtgatcttagctcagttgataaggacaatgcataatatatgcaaggtccggggttcaaac 33824940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000009; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Complemental strand, 3764599 - 3764535
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||| |||||||||||||||| || ||||||| ||||||| ||||||||| |||| |||||||    
T  3764599 cgtgagtttagttcagttgatatgaacaatacatgatatatgcaaggtccggagttctaactccg 3764535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 13864343 - 13864403
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||  ||||||| ||| || ||||||||||||||| ||||||||||||||||||    
T  13864343 cgtgagcttaactcagttggtatgaacaatacataatatatgcaaggtccggggttcaaac 13864403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 27903112 - 27903176
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||| |||||||||||| ||| || ||| ||||||||||| ||||| ||||||||||||||||    
T  27903112 cgtgagtttagttcagttggtatgaacaatgcataatatatgcaaggttcggggttcaaactccg 27903176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 30488924 - 30488988
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||||||||||||||| || ||| ||||||||||  |||||  |||||||||||||||    
T  30488924 cgtgagcttagttcagttgatatgaacaatgcataatatatacaaggtttggggttcaaactccg 30488988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 22394034 - 22394097
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactcc 96  Q
    ||||||||||| |||||||||||  | ||| ||||||||||||||| |||| ||||||||||||    
T  22394034 cgtgagcttagctcagttgatatggacaatgcataatatatgtaagatccgaggttcaaactcc 22394097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 27679494 - 27679556
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaa 92  Q
    |||||||||||||| ||||||| || | ||||| ||||||||||| ||||| |||||||||||    
T  27679494 ccccgtgagcttagctcagttggtaaagataatgcataatatatgcaaggttcggggttcaaa 27679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 9893730 - 9893673
Alignment:
Q  36 gagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||| |||||||||||| ||||| ||||| ||||| |||||| |||||||||||    
T  9893730 gagcttagctcagttgatatagataatgcataaaatatgcaaggtctggggttcaaac 9893673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 26409251 - 26409308
Alignment:
Q  32 ccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    |||||||||||| ||||||| |||  | ||| ||||||||||||||||||||||||||    
T  26409251 ccgtgagcttagctcagttggtatggacaatgcataatatatgtaaggtccggggttc 26409308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 40716011 - 40715946
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| ||| |||||||  | ||| ||||||||||| |||||||||||||||||| ||||    
T  40716011 cgtgagcttagctcaattgatatggacaatgcataatatatgcaaggtccggggttcaaaccccgg 40715946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 5614776 - 5614824
Alignment:
Q  45 tcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||  ||||| |||||||||||||||||| |||||||||||    
T  5614776 tcagttgatatggataatgcataatatatgtaaggtcgggggttcaaac 5614824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 37791224 - 37791160
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||||||||||||| || ||| ||  ||||||||||| ||||| || ||||||||||||||    
T  37791224 gtgagcttagttcagttggtagaaacaacgcataatatatgcaaggttcgaggttcaaactccgg 37791160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 42659576 - 42659628
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggg 85  Q
    |||||| |||| ||| |||||||||||||| ||||||||||||||||| ||||    
T  42659576 cgtgagtttagctcaattgatataaataatgcataatatatgtaaggttcggg 42659628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 5591259 - 5591321
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactcc 96  Q
    |||||| |||||||||||| || | ||||||||||||||||| ||||| | |||||||||||||    
T  5591259 cgtgagtttagttcagttggtagagataatacataatatatggaaggttc-gggttcaaactcc 5591321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 97
Target Start/End: Complemental strand, 6017447 - 6017384
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    |||||||||| |||||| |||  || |||| |||||||||| ||||| ||||||||||||||||    
T  6017447 gtgagcttagctcagttaataggaacaatatataatatatgaaaggttcggggttcaaactccg 6017384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 8882464 - 8882401
Alignment:
Q  30 ccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||||  ||||||||||   | | | ||||||||||||||||||||||||||||||    
T  8882464 ccccgtgagcttaactcagttgataatgacagtgcataatatatgtaaggtccggggttcaaac 8882401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 5107313 - 5107251
Alignment:
Q  27 tgcccccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||| ||||||||||  ||||||| ||| |||||| ||||||||||| |||||||| |||||    
T  5107313 tgccctcgtgagcttaactcagttggtatgaataatgcataatatatgcaaggtccgaggttc 5107251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 11156836 - 11156898
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactc 95  Q
    ||||||||||||||||||| |||  ||||||||||||||||  |||||  | |||||||||||    
T  11156836 cgtgagcttagttcagttgttatggataatacataatatatacaaggtttgaggttcaaactc 11156898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 42515806 - 42515872
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccgggg-ttcaaactccgg 98  Q
    |||||||||| |||||||| |||  | ||| ||||||||||||||||||||||| ||||||| ||||    
T  42515806 cgtgagcttaattcagttggtatggacaatgcataatatatgtaaggtccggggattcaaaccccgg 42515872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 93
Target Start/End: Complemental strand, 4763217 - 4763188
Alignment:
Q  64 cataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||||||||||||||    
T  4763217 cataatatatgtaaggtccggggttcaaac 4763188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 12190018 - 12190051
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaac 93  Q
    |||||||||||||||||||||| |||||||||||    
T  12190018 aatacataatatatgtaaggtcgggggttcaaac 12190051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 15774053 - 15774012
Alignment:
Q  39 cttagttcagttgatataaataatacataatatatgtaaggt 80  Q
    ||||||||||||| |||| ||||| |||||||||||||||||    
T  15774053 cttagttcagttggtatagataatgcataatatatgtaaggt 15774012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Original strand, 20721076 - 20721109
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||| ||||||||||||||||||    
T  20721076 aatacataatatatgcaaggtccggggttcaaac 20721109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 98
Target Start/End: Complemental strand, 22522863 - 22522798
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||| || |||| |||  | ||| ||||||||||| |||||||||||||||||| ||||    
T  22522863 cgtgagcttagctcggttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgg 22522798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Original strand, 29904447 - 29904484
Alignment:
Q  60 aatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||||||||||||| || |||||||||||||    
T  29904447 aatacataatatatgtaaggttcgaggttcaaactccg 29904484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 2839797 - 2839861
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||| ||||||| | |  ||||| ||||||||||  ||||| ||||||||||||||||    
T  2839797 cgtgagcttagctcagttggtttggataatgcataatatatccaaggttcggggttcaaactccg 2839861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 10704392 - 10704332
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaact 94  Q
    |||||||||| ||||||| |||  | ||| ||||| ||||| |||||||||||||||||||    
T  10704392 gtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaact 10704332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 97
Target Start/End: Original strand, 13796329 - 13796393
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccg 97  Q
    ||||||||||  ||||| ||||| || ||| ||||||||||| |||||| ||||| |||||||||    
T  13796329 cgtgagcttaactcagtcgatatgaacaatgcataatatatgcaaggtctggggtacaaactccg 13796393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 18589929 - 18589869
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||  ||||||| ||| || ||| ||||||||||| ||||||||||||| ||||    
T  18589929 cgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccggggtttaaac 18589869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 24498583 - 24498631
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtc 81  Q
    ||||||||||  ||||||||||| |||||| ||||| ||||||||||||    
T  24498583 cgtgagcttaactcagttgatatgaataatgcataaaatatgtaaggtc 24498631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 25709739 - 25709787
Alignment:
Q  40 ttagttcagttgatataaataatacataatatatgtaaggtccggggtt 88  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||| ||||    
T  25709739 ttagttcagttgataaaaacaatgcataatatatgcaaggtccgaggtt 25709787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 37932329 - 37932385
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||| ||||||| |||  | ||| ||||||||||| ||||||||||||||    
T  37932329 cgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggttc 37932385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 39980507 - 39980567
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||||||| |||  ||||| ||||| ||||| ||||||||| ||||||||    
T  39980507 cgtgagcttagctcagttggtatggataatgcataaaatatgcaaggtccggagttcaaac 39980567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 42473893 - 42473953
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||| ||| |||||   || ||| ||||||||||| ||||||||||||||||||    
T  42473893 cgtgagcttagctcaattgattggaacaatgcataatatatgcaaggtccggggttcaaac 42473953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 1247 - 1312
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||| ||||| |||||||||||  | ||| |||||||||||||||||| || |||||||||||||    
T  1247 cgtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctggagttcaaactccgg 1312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 22910 - 22975
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    ||||||||||||| ||||||||| || ||| ||||| ||||| |||||||| ||||||||| ||||    
T  22910 cgtgagcttagtttagttgatatgaacaatgcataaaatatgcaaggtccgaggttcaaaccccgg 22975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 361310 - 361250
Alignment:
Q  33 cgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaac 93  Q
    ||||||||||||||||||| |||  ||||| ||||| |||||| |||| ||||||||||||    
T  361310 cgtgagcttagttcagttggtatggataatgcataaaatatgttaggttcggggttcaaac 361250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 5904 - 5846
Alignment:
Q  31 cccgtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttc 89  Q
    ||||||||||||| |||||||| |  ||||||  ||||||||||||||||| |||||||    
T  5904 cccgtgagcttagctcagttgaaaagaataatgtataatatatgtaaggtctggggttc 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 31983 - 31919
Alignment:
Q  34 gtgagcttagttcagttgatataaataatacataatatatgtaaggtccggggttcaaactccgg 98  Q
    |||||||| | ||||||||||   | ||| ||||||||||| ||||||||||||||| |||||||    
T  31983 gtgagcttggctcagttgatagggacaatgcataatatatgcaaggtccggggttcacactccgg 31919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University