View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5351-Insertion-8 (Length: 107)
Name: NF5351-Insertion-8
Description: NF5351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5351-Insertion-8 |
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Alignment Details
Target: chr3 (Bit Score: 79; Significance: 2e-37; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 5336536 - 5336450
Alignment:
| Q |
8 |
aatatgagcattgttgttaaagcactccaaccacttctacggcctcccgctcctgaaccagaaacttaaagcagatgaattgaaatt |
94 |
Q |
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| T |
5336536 |
aatatgagcattgttgttaaagcactccaaccacttctgcggcctcccgctcctgaaccagaaacttgaagcagatgaattgaaatt |
5336450 |
T |
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Target: chr1 (Bit Score: 56; Significance: 1e-23; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 52719213 - 52719296
Alignment:
| Q |
8 |
aatatgagcattgttgttaaagcactccaaccacttctacggcctcccgctcctgaaccagaaacttaaagcagatgaattgaa |
91 |
Q |
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| T |
52719213 |
aatatgagcattgttgttaaagcactccagccacttctgaaggctcccgctcctgcaccagaaacttgaagcagatgaattgaa |
52719296 |
T |
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