View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5352-Insertion-2 (Length: 199)
Name: NF5352-Insertion-2
Description: NF5352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5352-Insertion-2 |
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Alignment Details
Target: chr1 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 7 - 185
Target Start/End: Complemental strand, 11761839 - 11761661
Alignment:
| Q |
7 |
agaatcaatatagttacatgggataaagaatggaatttacttcccatgaggcaggtgaacaaatgaatgaaatttattcagtattaataatacttgatga |
106 |
Q |
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| T |
11761839 |
agaatcaatatagttacatgggataaagaatggaatttacttcccatgaggcaggtgaacaaatgaatgaaatttattcagtattaatgatacttgatga |
11761740 |
T |
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| Q |
107 |
atcgacttaagataaccatttttctttcaatgggtaggaaactatcctcaccaatccataactgatgcactccatccag |
185 |
Q |
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| T |
11761739 |
atcgacttaagataaccatttttcttccaatgggtagaaaactatcctcaccaatccataactgatgcactccttccag |
11761661 |
T |
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