View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5352-Insertion-3 (Length: 205)
Name: NF5352-Insertion-3
Description: NF5352
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5352-Insertion-3 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 194; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-106
Query Start/End: Original strand, 8 - 205
Target Start/End: Original strand, 47334333 - 47334530
Alignment:
| Q |
8 |
aacaaaactggtactcattactatatctgtggtgttcctggacactgctctgcaggccaaaagctttccatcaatgttggtagtggtagcagcagccctg |
107 |
Q |
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| T |
47334333 |
aacaaaactggtactcattactatatctgtggtgttcctggacactgctctgcaggccaaaagctttccatcaatgttggtagtggtagcagcagccctg |
47334432 |
T |
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| Q |
108 |
ccacatcaccttctccttctgcctcgtcggcttctccttccaccggtgccactccaccctctgcttccggttctccctcaccggggtctcctgtcacc |
205 |
Q |
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| T |
47334433 |
ccacatcaccttctccttctgcctcgtcgccttctccttccaccggtgccactccaccctctgcttccggttctccctcaccggggtctcctgtcacc |
47334530 |
T |
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